FFCP PHASE1:Hg19::chrX:1435460..1435487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:1435460..1435487,- | |||
|coexpression_cluster_id=C865 | |||
|description=CAGE_peak_at_chrX:1435460..1435487,- | |||
|id=chrX:1435460..1435487,- | |||
|ontology_enrichment_celltype=CL:0002057!5.20e-61!42;CL:0000860!1.02e-56!45;CL:0000766!2.30e-47!76;CL:0000839!5.95e-47!70;CL:0000557!3.01e-46!71;CL:0002194!3.33e-43!63;CL:0000576!3.33e-43!63;CL:0000040!3.33e-43!63;CL:0000559!3.33e-43!63;CL:0002009!8.69e-42!65;CL:0000763!4.92e-31!112;CL:0000049!4.92e-31!112;CL:0000738!1.93e-26!140;CL:0002031!5.16e-25!124;CL:0002087!2.39e-21!119;CL:0000037!8.54e-21!172;CL:0000566!8.54e-21!172;CL:0002032!7.51e-20!165;CL:0000837!7.51e-20!165;CL:0000988!1.96e-19!182;CL:0000784!1.60e-10!3;CL:0000134!8.76e-10!358;CL:0002320!1.64e-09!365;CL:0000219!1.50e-08!390;CL:0000048!2.15e-07!430;CL:0000723!3.14e-07!436;CL:0000034!5.13e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-89;33!CL:0002057;1.09e-89;33!CL:0000473;2.27e-66;39!CL:0000234;2.27e-66;39!CL:0000576;7.46e-45;48!CL:0000766;1.06e-25;69!CL:0000763;8.41e-15;100!CL:0002087;9.29e-14;104!CL:0000738;1.34e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-78,42;CL:0002057,1.26e-78,42;CL:0000473,1.73e-68,48;CL:0000234,1.73e-68,48;CL:0002194,2.98e-60,59;CL:0000576,2.98e-60,59;CL:0000040,2.98e-60,59;CL:0000559,2.98e-60,59;CL:0002009,3.17e-58,61;CL:0000766,1.89e-54,72;CL:0000839,1.09e-53,66;CL:0000557,7.32e-53,67;CL:0000763,1.35e-35,108;CL:0000049,1.35e-35,108;CL:0002087,6.85e-30,115;CL:0002031,1.52e-28,120;CL:0000738,9.17e-28,136;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0000988,1.00e-20,177;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-54;42!CL:0000049;1.55e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.09e-40!80;UBERON:0001474!1.27e-37!86;UBERON:0004765!1.58e-31!101;UBERON:0001434!1.58e-31!101;UBERON:0002390!3.49e-31!102;UBERON:0003061!3.49e-31!102;UBERON:0002193!4.41e-28!112;UBERON:0002405!2.95e-27!115;UBERON:0002204!1.32e-17!167;UBERON:0003081!3.67e-14!216;UBERON:0002384!3.87e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.22e-46,76;UBERON:0001474,7.73e-43,82;UBERON:0004765,7.69e-39,90;UBERON:0002405,1.62e-37,93;UBERON:0002390,1.74e-35,98;UBERON:0003061,1.74e-35,98;UBERON:0001434,9.90e-35,100;UBERON:0002193,5.52e-32,108;UBERON:0002204,8.84e-20,167;UBERON:0003081,8.76e-16,203;UBERON:0000926,3.94e-09,315;UBERON:0004120,3.94e-09,315;UBERON:0006603,3.94e-09,315;UBERON:0002384,2.34e-08,371 | |||
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|short_description=p@chrX:1435460..1435487,- | |||
}} | }} |
Latest revision as of 06:27, 1 August 2015
Short description: | p@chrX:1435460..1435487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:1435460..1435487, - |
Coexpression cluster: | C865_CD14_Neutrophils_Dendritic_placenta_cervical_epitheloid_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.26e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.26e-78 | 42 |
defensive cell | 1.73e-68 | 48 |
phagocyte | 1.73e-68 | 48 |
monopoietic cell | 2.98e-60 | 59 |
monocyte | 2.98e-60 | 59 |
monoblast | 2.98e-60 | 59 |
promonocyte | 2.98e-60 | 59 |
macrophage dendritic cell progenitor | 3.17e-58 | 61 |
myeloid leukocyte | 1.89e-54 | 72 |
myeloid lineage restricted progenitor cell | 1.09e-53 | 66 |
granulocyte monocyte progenitor cell | 7.32e-53 | 67 |
myeloid cell | 1.35e-35 | 108 |
common myeloid progenitor | 1.35e-35 | 108 |
nongranular leukocyte | 6.85e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.52e-28 | 120 |
leukocyte | 9.17e-28 | 136 |
hematopoietic oligopotent progenitor cell | 4.74e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-23 | 161 |
hematopoietic stem cell | 5.58e-22 | 168 |
hematopoietic cell | 1.00e-20 | 177 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.22e-46 | 76 |
bone element | 7.73e-43 | 82 |
skeletal element | 7.69e-39 | 90 |
immune system | 1.62e-37 | 93 |
hematopoietic system | 1.74e-35 | 98 |
blood island | 1.74e-35 | 98 |
skeletal system | 9.90e-35 | 100 |
hemolymphoid system | 5.52e-32 | 108 |
musculoskeletal system | 8.84e-20 | 167 |
lateral plate mesoderm | 8.76e-16 | 203 |
mesoderm | 3.94e-09 | 315 |
mesoderm-derived structure | 3.94e-09 | 315 |
presumptive mesoderm | 3.94e-09 | 315 |
connective tissue | 2.34e-08 | 371 |