FFCP PHASE1:Mm9::chr2:117952511..117952558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:117952511..117952558,+ | |||
|description=CAGE_peak_at_chr2:117952511..117952558,+ | |||
|id=chr2:117952511..117952558,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.39e-13,6;CL:0000187,4.39e-13,6;CL:0000056,4.39e-13,6;CL:0000355,3.57e-11,9;CL:0000222,4.36e-11,7;CL:0002321,1.75e-09,70;CL:0002293,5.53e-08,3;CL:0000068,1.49e-07,3;CL:0002202,1.49e-07,3;CL:0000069,1.49e-07,3;CL:0002632,1.49e-07,3;CL:0002368,1.49e-07,3;CL:0000307,1.49e-07,3;CL:0000377,1.49e-07,3;CL:0002494,2.20e-07,3;CL:0000737,2.20e-07,3;CL:0000746,2.20e-07,3;CL:0000513,2.20e-07,3;CL:0000192,2.66e-07,3;CL:0000359,2.66e-07,3;CL:0002539,2.66e-07,3;CL:0000514,2.66e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.80e-14,11;UBERON:0003077,6.80e-14,11;UBERON:0007285,6.80e-14,11;UBERON:0002204,2.31e-12,32;UBERON:0001134,3.57e-11,9;UBERON:0002036,3.57e-11,9;UBERON:0002385,3.57e-11,9;UBERON:0000486,3.57e-11,9;UBERON:0007503,3.57e-11,9;UBERON:0001015,3.57e-11,9;UBERON:0002329,3.57e-11,9;UBERON:0003082,3.57e-11,9;UBERON:0003059,3.57e-11,9;UBERON:0007282,3.57e-11,9;UBERON:0004290,3.57e-11,9;UBERON:0009618,3.57e-11,9;UBERON:0000383,6.22e-10,10;UBERON:0003126,1.49e-07,3;UBERON:0001005,1.49e-07,3;UBERON:0007196,1.49e-07,3;UBERON:0001558,1.49e-07,3;UBERON:0001135,2.66e-07,3;UBERON:0004237,2.66e-07,3;UBERON:0004695,2.66e-07,3;UBERON:0002111,2.66e-07,3;UBERON:0004178,2.66e-07,3;UBERON:0000075,4.55e-07,6;UBERON:0005856,4.55e-07,6;UBERON:0005866,4.55e-07,6;UBERON:0005863,4.55e-07,6 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,2.09868563438444,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,2.09265815368454,0,0.523523743973798,3.52938892818609,2.73218193983378,2.91306211818692,3.52511090331616,3.14268486780495,13.0318194034794,0.782391344348039,5.88667922227206,5.05278220289285,9.13820525649132,0.55994568650145,7.18762821824858,0,0,0,6.43148590089868,3.43840127926508,7.21940929188419,0,0,0.633831403506179,0.338844532069132,0.889294796111139,3.5995988691256,0,2.8419204597844,0.898800331555214,1.92109152660777,0.103689612308478,0.270011876663381,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0,0,0,0.289864488701678,0,0,0,0,0,0,1.70430322578058,1.29893002301434,6.00677276667578,1.40843419776681,12.8326477414318,25.4805239706646,184.877342819866,6.71122227134764,9.62767488805375,5.56076889516262,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,1.45590164952668,1.32504911076236,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0,0,0.517406741478031,0.431135985865684,0,0,0.876782929710299,0.556094498451196,0,0.411564272815887,0,0,0,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.140271639780637,0.126473074248515,0.295220295959204,0,0.246794327843601,0,0.83422552858047,0.393117990226406,0,0.608580364165509,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0.325929952884052,1.69745085775188,0.938760993154008,0.335012514883631,0,1.75620283072019,0.472905432318573,0.664394068946325,0.159454768657487,0.327726629431476,0.345369963731791,0.723245292907558,0,0,0,0,0,0,2.45902418065013,0.252470927204373,0.631016438832513,1.56175497718655,0.215423397732799,0,0.222798674082394,0,0.809621403349789,1.46127928955656,1.58115111178609,0,0.283880170416537,0.35613120733451,0.488660878060728,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0.948110273807448,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0.925972636848558,0.188368457004691,0,0.228778173206523,0.339956859987711,0,0.138199973804424,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0,0.404593039154462,0.0826534557253359,0,0.518459893167171,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.269141569828427,0.671538465456314,0,0.375364950902364,0,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.628839487883947,0.551530525350042,0.888986911206461,0.206035057238894,0.64183841918363,0.505394423527595,0,0.377252682772152,0.280924522409647,0.128050304809739,0,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,1.59728225543404,0.715308569841963,0.290692833264657,0.282328141245992,0.676916863133412,1.09756783723664,1.8414879800649,0.814824683075171,1.12228454331548,0.474540072496697,0.394017929502254,2.04615521584845,0.464810523557898,0,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0.927471342481686 | |phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,2.09868563438444,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,2.09265815368454,0,0.523523743973798,3.52938892818609,2.73218193983378,2.91306211818692,3.52511090331616,3.14268486780495,13.0318194034794,0.782391344348039,5.88667922227206,5.05278220289285,9.13820525649132,0.55994568650145,7.18762821824858,0,0,0,6.43148590089868,3.43840127926508,7.21940929188419,0,0,0.633831403506179,0.338844532069132,0.889294796111139,3.5995988691256,0,2.8419204597844,0.898800331555214,1.92109152660777,0.103689612308478,0.270011876663381,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0,0,0,0.289864488701678,0,0,0,0,0,0,1.70430322578058,1.29893002301434,6.00677276667578,1.40843419776681,12.8326477414318,25.4805239706646,184.877342819866,6.71122227134764,9.62767488805375,5.56076889516262,0.45673551887624,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,1.45590164952668,1.32504911076236,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0,0,0.517406741478031,0.431135985865684,0,0,0.876782929710299,0.556094498451196,0,0.411564272815887,0,0,0,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.140271639780637,0.126473074248515,0.295220295959204,0,0.246794327843601,0,0.83422552858047,0.393117990226406,0,0.608580364165509,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0.325929952884052,1.69745085775188,0.938760993154008,0.335012514883631,0,1.75620283072019,0.472905432318573,0.664394068946325,0.159454768657487,0.327726629431476,0.345369963731791,0.723245292907558,0,0,0,0,0,0,2.45902418065013,0.252470927204373,0.631016438832513,1.56175497718655,0.215423397732799,0,0.222798674082394,0,0.809621403349789,1.46127928955656,1.58115111178609,0,0.283880170416537,0.35613120733451,0.488660878060728,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0.948110273807448,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0.925972636848558,0.188368457004691,0,0.228778173206523,0.339956859987711,0,0.138199973804424,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0,0.404593039154462,0.0826534557253359,0,0.518459893167171,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.269141569828427,0.671538465456314,0,0.375364950902364,0,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.628839487883947,0.551530525350042,0.888986911206461,0.206035057238894,0.64183841918363,0.505394423527595,0,0.377252682772152,0.280924522409647,0.128050304809739,0,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,1.59728225543404,0.715308569841963,0.290692833264657,0.282328141245992,0.676916863133412,1.09756783723664,1.8414879800649,0.814824683075171,1.12228454331548,0.474540072496697,0.394017929502254,2.04615521584845,0.464810523557898,0,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0.927471342481686 | ||
|short_description=p@chr2:117952511..117952558,+ | |||
}} | }} |
Latest revision as of 19:49, 3 August 2015
Short description: | p@chr2:117952511..117952558, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:117952511..117952558, + |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.39e-13 | 6 |
muscle cell | 4.39e-13 | 6 |
myoblast | 4.39e-13 | 6 |
multi-potent skeletal muscle stem cell | 3.57e-11 | 9 |
mesodermal cell | 4.36e-11 | 7 |
embryonic cell | 1.75e-09 | 70 |
epithelial cell of thymus | 5.53e-08 | 3 |
duct epithelial cell | 1.49e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.49e-07 | 3 |
branched duct epithelial cell | 1.49e-07 | 3 |
epithelial cell of lower respiratory tract | 1.49e-07 | 3 |
respiratory epithelial cell | 1.49e-07 | 3 |
tracheal epithelial cell | 1.49e-07 | 3 |
tracheoblast | 1.49e-07 | 3 |
cardiocyte | 2.20e-07 | 3 |
striated muscle cell | 2.20e-07 | 3 |
cardiac muscle cell | 2.20e-07 | 3 |
cardiac muscle myoblast | 2.20e-07 | 3 |
smooth muscle cell | 2.66e-07 | 3 |
vascular associated smooth muscle cell | 2.66e-07 | 3 |
aortic smooth muscle cell | 2.66e-07 | 3 |
smooth muscle myoblast | 2.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 6.80e-14 | 11 |
paraxial mesoderm | 6.80e-14 | 11 |
presumptive paraxial mesoderm | 6.80e-14 | 11 |
musculoskeletal system | 2.31e-12 | 32 |
skeletal muscle tissue | 3.57e-11 | 9 |
striated muscle tissue | 3.57e-11 | 9 |
muscle tissue | 3.57e-11 | 9 |
multilaminar epithelium | 3.57e-11 | 9 |
epithelial vesicle | 3.57e-11 | 9 |
musculature | 3.57e-11 | 9 |
somite | 3.57e-11 | 9 |
myotome | 3.57e-11 | 9 |
presomitic mesoderm | 3.57e-11 | 9 |
presumptive segmental plate | 3.57e-11 | 9 |
dermomyotome | 3.57e-11 | 9 |
trunk paraxial mesoderm | 3.57e-11 | 9 |
musculature of body | 6.22e-10 | 10 |
trachea | 1.49e-07 | 3 |
respiratory airway | 1.49e-07 | 3 |
tracheobronchial tree | 1.49e-07 | 3 |
lower respiratory tract | 1.49e-07 | 3 |
smooth muscle tissue | 2.66e-07 | 3 |
blood vessel smooth muscle | 2.66e-07 | 3 |
arterial system smooth muscle | 2.66e-07 | 3 |
artery smooth muscle tissue | 2.66e-07 | 3 |
aorta smooth muscle tissue | 2.66e-07 | 3 |
subdivision of skeletal system | 4.55e-07 | 6 |
developing mesenchymal condensation | 4.55e-07 | 6 |
pre-cartilage condensation | 4.55e-07 | 6 |
cartilaginous condensation | 4.55e-07 | 6 |