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FFCP PHASE1:Mm9::chr2:52414098..52414121,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:52414098..52414121,-
|DHSsupport=NA
|short_description=p4@Cacnb4
|DPIdataset=NA
|description=CAGE_peak_4_at_Cacnb4_5end
|association_with_transcript=-11bp_to_ENSMUST00000102761,NM_146123,uc008jra.1,uc008jrb.1_5end
|EntrezGene=12298
|EntrezGene=12298
|HGNC=
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=Q8R0S4,A2ATZ6,A2ATZ5
|UniProt=Q8R0S4,A2ATZ6,A2ATZ5
|association_with_transcript=-11bp_to_ENSMUST00000102761,NM_146123,uc008jra.1,uc008jrb.1_5end
|cluster_id=chr2:52414098..52414121,-
|description=CAGE_peak_4_at_Cacnb4_5end
|id=chr2:52414098..52414121,-
|ontology_enrichment_celltype=CL:0000117!9.50e-17!23;CL:0000337!9.50e-17!23;CL:0000540!1.77e-10!33;CL:0000047!1.77e-10!33;CL:0000031!1.77e-10!33;CL:0000404!1.77e-10!33;CL:0000393!1.17e-08!39;CL:0000211!1.17e-08!39;CL:0002319!1.31e-07!43;CL:0000221!3.13e-07!44;CL:0000133!3.13e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,4.58e-24,23;CL:0000337,4.58e-24,23;CL:0000540,5.81e-15,33;CL:0000047,5.81e-15,33;CL:0000031,5.81e-15,33;CL:0000404,5.81e-15,33;CL:0000393,8.86e-12,39;CL:0000211,8.86e-12,39;CL:0002319,3.63e-10,43;CL:0000221,8.22e-10,44;CL:0000133,8.22e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.09e-22!34;UBERON:0001049!4.83e-22!52;UBERON:0005068!4.83e-22!52;UBERON:0006241!4.83e-22!52;UBERON:0007135!4.83e-22!52;UBERON:0001017!5.39e-21!73;UBERON:0005743!5.39e-21!73;UBERON:0000955!7.40e-21!50;UBERON:0006238!7.40e-21!50;UBERON:0000033!8.43e-21!63;UBERON:0000073!1.51e-20!75;UBERON:0001016!1.51e-20!75;UBERON:0002616!5.41e-20!49;UBERON:0002791!6.84e-19!29;UBERON:0003528!6.84e-19!29;UBERON:0001893!6.84e-19!29;UBERON:0002346!2.17e-18!71;UBERON:0003075!2.17e-18!71;UBERON:0007284!2.17e-18!71;UBERON:0003056!5.00e-17!49;UBERON:0003080!1.85e-15!40;UBERON:0004121!2.84e-15!102;UBERON:0000924!2.84e-15!102;UBERON:0006601!2.84e-15!102;UBERON:0002780!1.29e-14!39;UBERON:0001890!1.29e-14!39;UBERON:0006240!1.29e-14!39;UBERON:0000956!6.82e-13!21;UBERON:0001869!6.82e-13!21;UBERON:0000203!6.82e-13!21;UBERON:0007811!4.78e-12!86;UBERON:0002619!1.42e-10!17;UBERON:0000153!1.53e-09!94;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0003076!2.35e-07!12;UBERON:0003057!2.35e-07!12;UBERON:0002420!2.89e-07!8;UBERON:0007245!2.89e-07!8;UBERON:0010009!2.89e-07!8;UBERON:0010011!2.89e-07!8;UBERON:0000454!2.89e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-39,54;UBERON:0001049,2.47e-36,52;UBERON:0005068,2.47e-36,52;UBERON:0006241,2.47e-36,52;UBERON:0007135,2.47e-36,52;UBERON:0001017,4.68e-35,73;UBERON:0002020,7.45e-34,34;UBERON:0001016,8.62e-34,75;UBERON:0002346,9.21e-31,64;UBERON:0003075,9.21e-31,64;UBERON:0007284,9.21e-31,64;UBERON:0000955,8.51e-30,47;UBERON:0006238,8.51e-30,47;UBERON:0002616,2.47e-28,46;UBERON:0003528,3.00e-27,29;UBERON:0002791,3.00e-27,29;UBERON:0001893,3.00e-27,29;UBERON:0004121,1.00e-26,95;UBERON:0000924,1.00e-26,95;UBERON:0006601,1.00e-26,95;UBERON:0010371,1.42e-25,73;UBERON:0003080,5.93e-24,40;UBERON:0002780,1.70e-22,39;UBERON:0001890,1.70e-22,39;UBERON:0006240,1.70e-22,39;UBERON:0003056,4.87e-21,49;UBERON:0010314,5.51e-18,92;UBERON:0000956,5.77e-17,21;UBERON:0001869,5.77e-17,21;UBERON:0000203,5.77e-17,21;UBERON:0002021,3.05e-14,10;UBERON:0000411,3.05e-14,10;UBERON:0001950,3.05e-14,10;UBERON:0002619,5.56e-13,17;UBERON:0003076,8.68e-13,12;UBERON:0003057,8.68e-13,12;UBERON:0002420,1.08e-11,8;UBERON:0007245,1.08e-11,8;UBERON:0010009,1.08e-11,8;UBERON:0010011,1.08e-11,8;UBERON:0000454,1.08e-11,8;UBERON:0000025,8.75e-11,114;UBERON:0004111,2.02e-09,122;UBERON:0002240,2.56e-09,6;UBERON:0005174,2.56e-09,6;UBERON:0001137,2.56e-09,6;UBERON:0001948,1.00e-07,5;UBERON:0002315,1.00e-07,5;UBERON:0000369,1.83e-07,5;UBERON:0002435,1.83e-07,5;UBERON:0000204,1.83e-07,5;UBERON:0010082,1.83e-07,5;UBERON:0002950,1.93e-07,4;UBERON:0001891,1.93e-07,4;UBERON:0009616,1.93e-07,4;UBERON:0010286,1.93e-07,4
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,2.42779753031517,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.08004750665353,1.05162480675691,1.14260393761521,2.87129103237098,2.08234358665422,0.862609239164127,0.919218786610021,14.3150645299205,8.55505165170758,8.60196586234964,2.2420668914133,2.56165402086747,1.56274011167028,5.58365998002762,9.56696437053856,8.09830713217094,8.54422897873636,6.97621235915604,4.47358669980721,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0.289198713839823,0,0,0,0,0,28.6925181071316,25.1336048176146,0,0,0,0,22.7681771895331,6.8625090422794,3.5183218591602,6.25767552692195,6.39288643325826,12.6750707181332,9.5722345209977,0,0,0,1.05220927943237,0,0.229902104433473,0,0.60281927134286,0.340182495756639,0.640568601424249,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.822799249567402,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,14.7202963994889,2.16099685996497,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,23.4403861382176,19.5743516608979,0,0,0,0,0,0,0,0.283076530788832,0,0,0,10.9249247583414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,22.4364615432717,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,5.06357760157895,6.30185064783336,3.95262319390481,2.05524755931193,4.5323633843382,6.75022500231806,5.85417564191487,5.43770890781046,4.65984280576638,0.830298780673413,0,0.682934423016537,0.729320151204882,0.838452650511929,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,1.26348605881899,1.52087579934144,1.32038438970253,1.03005658216871,1.21647789569252,1.03383844120104,0.476293691283074,1.50649623728312,0.77163688185482,0,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,1.03520318456864,1.52306294205018,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.492522411877817,0.818462086339379,1.23949472948773,0.385813221962283,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0,0
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,2.42779753031517,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,1.14058573539325,1.08004750665353,1.05162480675691,1.14260393761521,2.87129103237098,2.08234358665422,0.862609239164127,0.919218786610021,14.3150645299205,8.55505165170758,8.60196586234964,2.2420668914133,2.56165402086747,1.56274011167028,5.58365998002762,9.56696437053856,8.09830713217094,8.54422897873636,6.97621235915604,4.47358669980721,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0.289198713839823,0,0,0,0,0,28.6925181071316,25.1336048176146,0,0,0,0,22.7681771895331,6.8625090422794,3.5183218591602,6.25767552692195,6.39288643325826,12.6750707181332,9.5722345209977,0,0,0,1.05220927943237,0,0.229902104433473,0,0.60281927134286,0.340182495756639,0.640568601424249,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0.822799249567402,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.536825675041487,14.7202963994889,2.16099685996497,0,0.264450566663544,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,23.4403861382176,19.5743516608979,0,0,0,0,0,0,0,0.283076530788832,0,0,0,10.9249247583414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,22.4364615432717,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,5.06357760157895,6.30185064783336,3.95262319390481,2.05524755931193,4.5323633843382,6.75022500231806,5.85417564191487,5.43770890781046,4.65984280576638,0.830298780673413,0,0.682934423016537,0.729320151204882,0.838452650511929,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,1.26348605881899,1.52087579934144,1.32038438970253,1.03005658216871,1.21647789569252,1.03383844120104,0.476293691283074,1.50649623728312,0.77163688185482,0,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,1.03520318456864,1.52306294205018,0.365855945745545,1.05227884575137,0.679020569229309,0.561142271657738,0.711810108745045,0.492522411877817,0.818462086339379,1.23949472948773,0.385813221962283,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0,0
|short_description=p4@Cacnb4
}}
}}

Latest revision as of 18:36, 26 September 2015

Short description:p4@Cacnb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cacnb4_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: -11bp_to_ENSMUST00000102761, NM_146123, uc008jra.1, uc008jrb.1_5end
EntrezGene:Cacnb4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cacnb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I225.13
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A422.77
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C223.44
medulla oblongata, neonate N30.CNhs11200.1396-42A319.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.58e-2423
neuroblast (sensu Vertebrata)4.58e-2423
neuron5.81e-1533
neuronal stem cell5.81e-1533
neuroblast5.81e-1533
electrically signaling cell5.81e-1533
electrically responsive cell8.86e-1239
electrically active cell8.86e-1239
neural cell3.63e-1043
ectodermal cell8.22e-1044
neurectodermal cell8.22e-1044

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.38e-3954
neural tube2.47e-3652
neural rod2.47e-3652
future spinal cord2.47e-3652
neural keel2.47e-3652
central nervous system4.68e-3573
gray matter7.45e-3434
nervous system8.62e-3475
neurectoderm9.21e-3164
neural plate9.21e-3164
presumptive neural plate9.21e-3164
brain8.51e-3047
future brain8.51e-3047
regional part of brain2.47e-2846
brain grey matter3.00e-2729
regional part of telencephalon3.00e-2729
telencephalon3.00e-2729
ectoderm-derived structure1.00e-2695
ectoderm1.00e-2695
presumptive ectoderm1.00e-2695
ecto-epithelium1.42e-2573
anterior neural tube5.93e-2440
regional part of forebrain1.70e-2239
forebrain1.70e-2239
future forebrain1.70e-2239
pre-chordal neural plate4.87e-2149
structure with developmental contribution from neural crest5.51e-1892
cerebral cortex5.77e-1721
cerebral hemisphere5.77e-1721
pallium5.77e-1721
occipital lobe3.05e-1410
visual cortex3.05e-1410
neocortex3.05e-1410
regional part of cerebral cortex5.56e-1317
posterior neural tube8.68e-1312
chordal neural plate8.68e-1312
basal ganglion1.08e-118
nuclear complex of neuraxis1.08e-118
aggregate regional part of brain1.08e-118
collection of basal ganglia1.08e-118
cerebral subcortex1.08e-118
tube8.75e-11114
anatomical conduit2.02e-09122
spinal cord2.56e-096
dorsal region element2.56e-096
dorsum2.56e-096
regional part of spinal cord1.00e-075
gray matter of spinal cord1.00e-075
corpus striatum1.83e-075
striatum1.83e-075
ventral part of telencephalon1.83e-075
future corpus striatum1.83e-075
regional part of midbrain1.93e-074
midbrain1.93e-074
presumptive midbrain1.93e-074
midbrain neural tube1.93e-074
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