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FFCP PHASE1:Mm9::chr7:134006101..134006125,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:134006101..134006125,+
|DHSsupport=NA
|short_description=p9@Hirip3
|DPIdataset=NA
|description=CAGE_peak_9_at_Hirip3_5end
|association_with_transcript=106bp_to_ENSMUST00000132808_5end
|EntrezGene=233876
|EntrezGene=233876
|HGNC=
|HGNC=
|MCL_coexpression_id=68
|TSSclassifier=NA
|UniProt=D3YWU7
|UniProt=D3YWU7
|association_with_transcript=106bp_to_ENSMUST00000132808_5end
|cluster_id=chr7:134006101..134006125,+
|description=CAGE_peak_9_at_Hirip3_5end
|id=chr7:134006101..134006125,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000893,1.33e-12,6;CL:0002489,1.33e-12,6;CL:0000898,1.33e-12,6;CL:0000809,1.33e-12,6;CL:0000810,1.33e-12,6;CL:0000895,1.33e-12,6;CL:0000808,1.33e-12,6;CL:0000894,1.33e-12,6;CL:0000806,1.33e-12,6;CL:0000807,1.33e-12,6;CL:0000805,1.33e-12,6;CL:0002425,1.33e-12,6;CL:0002436,1.33e-12,6;CL:0002427,1.33e-12,6;CL:0002428,1.33e-12,6;CL:0002429,1.33e-12,6;CL:0002433,1.33e-12,6;CL:0002431,1.33e-12,6;CL:0002432,1.33e-12,6;CL:0000624,1.74e-09,8;CL:0000791,1.92e-08,9;CL:0000789,1.92e-08,9;CL:0002420,1.92e-08,9;CL:0002419,1.92e-08,9;CL:0000790,1.92e-08,9;CL:0000084,6.35e-07,11;CL:0000827,6.35e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!9.74e-11!29;UBERON:0002390!7.59e-09!45;UBERON:0003061!7.59e-09!45;UBERON:0002193!2.33e-08!48;UBERON:0002370!7.71e-08!23;UBERON:0000974!7.71e-08!23;UBERON:0004807!7.71e-08!23;UBERON:0005058!7.71e-08!23;UBERON:0003351!7.71e-08!23;UBERON:0009113!7.71e-08!23;UBERON:0003295!7.71e-08!23;UBERON:0009722!7.71e-08!23;UBERON:0005562!7.71e-08!23;UBERON:0007690!7.71e-08!23;UBERON:0000153!7.89e-08!94;UBERON:0006562!4.05e-07!24;UBERON:0003408!4.05e-07!24;UBERON:0001557!4.05e-07!24;UBERON:0001042!4.05e-07!24;UBERON:0008814!4.05e-07!24;UBERON:0009145!4.05e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.51e-24,29;UBERON:0005057,2.51e-24,29;UBERON:0002370,3.31e-22,23;UBERON:0000974,3.31e-22,23;UBERON:0004807,3.31e-22,23;UBERON:0005058,3.31e-22,23;UBERON:0003351,3.31e-22,23;UBERON:0009113,3.31e-22,23;UBERON:0003295,3.31e-22,23;UBERON:0009722,3.31e-22,23;UBERON:0005562,3.31e-22,23;UBERON:0007690,3.31e-22,23;UBERON:0006562,3.27e-21,24;UBERON:0003408,3.27e-21,24;UBERON:0001557,3.27e-21,24;UBERON:0001042,3.27e-21,24;UBERON:0008814,3.27e-21,24;UBERON:0009145,3.27e-21,24;UBERON:0000077,8.37e-20,35;UBERON:0002193,7.22e-19,48;UBERON:0002405,7.22e-19,48;UBERON:0000072,1.15e-18,27;UBERON:0002390,1.77e-17,45;UBERON:0003061,1.77e-17,45;UBERON:0007811,1.43e-13,36;UBERON:0000065,1.06e-11,41;UBERON:0001004,2.21e-11,42;UBERON:0000153,4.46e-11,43;UBERON:0003929,4.89e-10,55;UBERON:0002530,1.09e-09,65;UBERON:0002368,4.91e-09,60;UBERON:0001041,7.06e-09,80;UBERON:0000949,1.61e-08,72;UBERON:0000490,4.94e-08,66;UBERON:0003081,6.42e-08,87;UBERON:0005911,1.35e-07,69
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0.129123323441576,1.40788722151667,1.17032263160997,8.04724450659873,5.98291192465023,0,0.174840804837995,0.333109761815663,0.607425802169478,0.699561878128147,0.630924330716475,0.137114433605739,0.84877930359606,0.17008658030214,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.122490799214954,0.287536413054709,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,0,1.55362730188303,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0.662524555381181,0.969750506270444,0,0.585561594023094,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0,0,0,0.780722657776222,0,0.540186389416048,0.753524089178575,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.862271971731369,0.378212160335639,0.527853372491847,0.43839146485515,0,0.696504333044333,0,0,1.40442637462647,0.51469581422943,0.284163499395593,0.414251545071004,0.938104239924385,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.502670417600539,0,0,0,0.432276099749388,0,0,0.685491075658373,0,0.203651327845314,0,0.420814919341911,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0,0.674586337154561,0.202860121388503,0,0.25462585178142,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.167506257441816,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,1.10374698521893,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0.971122544619926,0.302323556964751,0.943025398779491,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0.720244376125241,0.258717367565509,0.643011105094777,0.532020700926821,0.891844088010353,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,0,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,0.18542530201051,0.854354403989263,0.619160603889667,0.370389054739423,1.13021074202815,1.6403307326523,0.686334519619568,0,0.139951452323658,0.276399947608848,0,0.316335993581135,0,0.324016022465404,0.209088296014469,0.436725127492355,0.404593039154462,0.165306911450672,0,0,0,1.12738587736838,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,1.74608627180206,1.42912905275575,1.07416017400489,0.79472541912506,0.841368146639782,1.62458479892035,1.21159739937777,0.914481679859998,1.20991422164209,0.682205165178267,0.673482891482306,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.62272408550506,0.798049746802062,0.512200817262403,0,0.209613162627982,0.551530525350042,0,0,0,0.252697211763798,0.25347929989024,0.754505365544305,0,0.256100609619477,0.114870937911227,0.952587382566147,0.579421629724277,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.282328141245992,0.169229215783353,0,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0.129123323441576,1.40788722151667,1.17032263160997,8.04724450659873,5.98291192465023,0,0.174840804837995,0.333109761815663,0.607425802169478,0.699561878128147,0.630924330716475,0.137114433605739,0.84877930359606,0.17008658030214,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.122490799214954,0.287536413054709,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,0,1.55362730188303,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0.662524555381181,0.969750506270444,0,0.585561594023094,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0,0,0,0.780722657776222,0,0.540186389416048,0.753524089178575,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.862271971731369,0.378212160335639,0.527853372491847,0.43839146485515,0,0.696504333044333,0,0,1.40442637462647,0.51469581422943,0.284163499395593,0.414251545071004,0.938104239924385,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.502670417600539,0,0,0,0.432276099749388,0,0,0.685491075658373,0,0.203651327845314,0,0.420814919341911,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0,0.674586337154561,0.202860121388503,0,0.25462585178142,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.167506257441816,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,1.10374698521893,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0.971122544619926,0.302323556964751,0.943025398779491,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0.720244376125241,0.258717367565509,0.643011105094777,0.532020700926821,0.891844088010353,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,0,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,0.18542530201051,0.854354403989263,0.619160603889667,0.370389054739423,1.13021074202815,1.6403307326523,0.686334519619568,0,0.139951452323658,0.276399947608848,0,0.316335993581135,0,0.324016022465404,0.209088296014469,0.436725127492355,0.404593039154462,0.165306911450672,0,0,0,1.12738587736838,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,1.74608627180206,1.42912905275575,1.07416017400489,0.79472541912506,0.841368146639782,1.62458479892035,1.21159739937777,0.914481679859998,1.20991422164209,0.682205165178267,0.673482891482306,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.62272408550506,0.798049746802062,0.512200817262403,0,0.209613162627982,0.551530525350042,0,0,0,0.252697211763798,0.25347929989024,0.754505365544305,0,0.256100609619477,0.114870937911227,0.952587382566147,0.579421629724277,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.282328141245992,0.169229215783353,0,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0
|short_description=p9@Hirip3
}}
}}

Latest revision as of 21:44, 25 September 2015

Short description:p9@Hirip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Hirip3_5end
Coexpression cluster:MCL_coexpression_mm9:68
Association with transcript: 106bp_to_ENSMUST00000132808_5end
EntrezGene:Hirip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Hirip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
thymocyte1.33e-126
double negative thymocyte1.33e-126
naive T cell1.33e-126
double-positive, alpha-beta thymocyte1.33e-126
CD4-positive, alpha-beta thymocyte1.33e-126
naive thymus-derived CD4-positive, alpha-beta T cell1.33e-126
DN4 thymocyte1.33e-126
DN1 thymic pro-T cell1.33e-126
DN2 thymocyte1.33e-126
DN3 thymocyte1.33e-126
immature single positive thymocyte1.33e-126
early T lineage precursor1.33e-126
mature CD4 single-positive thymocyte1.33e-126
resting double-positive thymocyte1.33e-126
double-positive blast1.33e-126
CD69-positive double-positive thymocyte1.33e-126
CD69-positive, CD4-positive single-positive thymocyte1.33e-126
CD4-positive, CD8-intermediate double-positive thymocyte1.33e-126
CD24-positive, CD4 single-positive thymocyte1.33e-126
CD4-positive, alpha-beta T cell1.74e-098
mature alpha-beta T cell1.92e-089
alpha-beta T cell1.92e-089
immature T cell1.92e-089
mature T cell1.92e-089
immature alpha-beta T cell1.92e-089
T cell6.35e-0711
pro-T cell6.35e-0711

Uber anatomy
Ontology termp-valuen
hemopoietic organ2.51e-2429
immune organ2.51e-2429
thymus3.31e-2223
neck3.31e-2223
respiratory system epithelium3.31e-2223
hemolymphoid system gland3.31e-2223
pharyngeal epithelium3.31e-2223
thymic region3.31e-2223
pharyngeal gland3.31e-2223
entire pharyngeal arch endoderm3.31e-2223
thymus primordium3.31e-2223
early pharyngeal endoderm3.31e-2223
pharynx3.27e-2124
gland of gut3.27e-2124
upper respiratory tract3.27e-2124
chordate pharynx3.27e-2124
pharyngeal arch system3.27e-2124
pharyngeal region of foregut3.27e-2124
mixed endoderm/mesoderm-derived structure8.37e-2035
hemolymphoid system7.22e-1948
immune system7.22e-1948
segment of respiratory tract1.15e-1827
hematopoietic system1.77e-1745
blood island1.77e-1745
craniocervical region1.43e-1336
respiratory tract1.06e-1141
respiratory system2.21e-1142
anterior region of body4.46e-1143
gut epithelium4.89e-1055
gland1.09e-0965
endocrine gland4.91e-0960
foregut7.06e-0980
endocrine system1.61e-0872
unilaminar epithelium4.94e-0866
lateral plate mesoderm6.42e-0887
endo-epithelium1.35e-0769
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