FF:11573-120E7: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00004872 | ||
| | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004872 | ||
| | |accession_numbers=CAGE;DRX008342;DRR009214;DRZ000639;DRZ002024;DRZ011989;DRZ013374 | ||
| | |accession_numbers_RNASeq=sRNA-Seq;DRX037002;DRR041368;DRZ007010 | ||
| | |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0000119,UBERON:0003210 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0002320,CL:0002371,CL:0000499,CL:0000327,CL:0000255,CL:0000708 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000091 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr15:80843484..80843499,+!p5@ARNT2!1.96!89.37!ARNT2;;chr3:147127142..147127168,+!p1@ZIC1!1.90!78.04!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!1.78!58.85!ZIC1;;chr13:100634031..100634045,+!p1@ZIC2!1.71!50.57!ZIC2;;chr10:48355030..48355090,+!p1@ZNF488!1.61!50.57!ZNF488;;chr17:1959369..1959388,+!p2@HIC1!1.60!99.40!HIC1;;chr2:19558373..19558392,-!p1@OSR1!1.58!97.66!OSR1;;chr6:85474299..85474324,-!p1@TBX18!1.52!56.67!TBX18;;chr4:4861385..4861398,+!p1@MSX1!1.47!82.40!MSX1;;chr3:147111231..147111281,+!p3@ZIC1!1.45!27.47!ZIC1;;chr5:92918919..92918942,+!p1@NR2F1!1.34!91.55!NR2F1;;chr14:61116183..61116208,-!p1@SIX1!1.33!74.99!SIX1;;chr11:44331576..44331650,-!p1@ALX4!1.22!15.69!ALX4;;chr15:67458861..67458879,+!p17@SMAD3!1.20!14.82!SMAD3;;chrY:21906594..21906622,-!p1@KDM5D!1.19!14.39!KDM5D;;chr6:1610293..1610310,+!p1@FOXC1!1.17!23.11!FOXC1;;chr2:5832508..5832524,+!p1@SOX11!1.16!13.51!SOX11;;chr3:25469724..25469773,+!p1@RARB!1.15!19.18!RARB;;chr17:1958388..1958404,+!p1@HIC1!1.14!80.65!HIC1;;chr15:80696703..80696754,+!p1@ARNT2!1.14!17.00!ARNT2;;chr5:72744594..72744609,-!p1@FOXD1!1.13!57.11!FOXD1;;chr7:19157248..19157268,-!p1@TWIST1!1.13!34.44!TWIST1;;chr1:110613238..110613272,-!p1@ALX3!1.11!11.77!ALX3;;chr3:147139053..147139112,+!p5@ZIC1!1.09!11.33!ZIC1;;chr12:66218598..66218645,+!p2@HMGA2!1.08!51.44!HMGA2;;chr11:61520075..61520136,+!p1@C11orf9!1.08!23.54!C11orf9;;chr1:170633348..170633399,+!p2@PRRX1!1.06!14.39!PRRX1;;chr2:45236540..45236577,-!p1@SIX2!1.06!10.46!SIX2;;chr3:25469815..25469866,+!p3@RARB!1.06!10.46!RARB;;chr15:96873984..96873999,+!p3@NR2F2!1.05!75.42!NR2F2;;chr1:170633262..170633285,+!p3@PRRX1!1.05!11.77!PRRX1;;chr19:45260775..45260838,+!p5@BCL3!1.04!13.08!BCL3;;chr3:25470156..25470227,+!p2@RARB!1.01!9.16!RARB;;chr18:19749541..19749557,+!p1@GATA6!0.99!27.90!GATA6;;chr15:67458491..67458505,+!p18@SMAD3!0.99!8.72!SMAD3;;chr7:44143925..44143970,+!p1@AEBP1!0.97!193.13!AEBP1;;chr7:44143978..44143989,+!p2@AEBP1!0.97!15.69!AEBP1;;chr3:25470062..25470084,+!p4@RARB!0.97!8.28!RARB;;chr13:100634004..100634025,+!p2@ZIC2!0.97!8.28!ZIC2;;chr6:1389789..1389821,+!p1@FOXF2!0.96!11.33!FOXF2;;chr15:80842979..80842998,+!p20@ARNT2!0.95!7.85!ARNT2;;chr11:46299199..46299233,+!p1@CREB3L1!0.92!39.24!CREB3L1;;chr1:23696448..23696453,-!p5@ZNF436!0.92!9.16!ZNF436;;chr1:23696348..23696363,-!p4@ZNF436!0.92!8.28!ZNF436;;chr13:100623375..100623425,-!p1@ZIC5!0.92!7.41!ZIC5;;chr3:147111198..147111225,+!p4@ZIC1!0.92!7.41!ZIC1;;chr3:147111285..147111298,+!p10@ZIC1!0.92!7.41!ZIC1;;chr5:72744562..72744573,-!p3@FOXD1!0.90!8.72!FOXD1;;chr5:72743793..72743855,-!p4@FOXD1!0.88!7.85!FOXD1;;chr3:147124307..147124336,-!p2@ZIC4!0.88!6.54!ZIC4;;chr11:44331679..44331702,-!p2@ALX4!0.88!6.54!ALX4;;chr6:41514078..41514158,+!p1@FOXP4!0.87!61.47!FOXP4;;chr15:57511609..57511651,+!p2@TCF12!0.86!10.90!TCF12;;chrX:136648279..136648295,+!p1@ZIC3!0.85!6.10!ZIC3;;chr5:92920456..92920488,+!p9@NR2F1!0.84!6.98!NR2F1;;chr15:96869511..96869525,+!p16@NR2F2!0.84!6.54!NR2F2;;chr14:21994337..21994442,-!p1@SALL2!0.83!17.00!SALL2;;chr15:96874927..96874938,+!p8@NR2F2!0.82!12.64!NR2F2;;chr15:67458836..67458859,+!p22@SMAD3!0.82!5.67!SMAD3;;chr15:96874145..96874166,+!p7@NR2F2!0.81!10.90!NR2F2;;chr16:86600426..86600441,+!p1@FOXC2!0.80!13.95!FOXC2;;chr15:96869114..96869160,+!p11@NR2F2!0.80!7.41!NR2F2;;chr15:96873921..96873946,+!p1@NR2F2!0.79!159.56!NR2F2;;chr15:96874012..96874042,+!p2@NR2F2!0.79!50.14!NR2F2;;chr3:147111317..147111328,+!p8@ZIC1!0.79!5.23!ZIC1;;chr2:121493425..121493474,+!p1@GLI2!0.78!11.77!GLI2;;chr20:62462566..62462631,-!p1@ZBTB46!0.78!10.03!ZBTB46;;chr7:150946015..150946070,-!p3@SMARCD3!0.77!11.33!SMARCD3;;chr9:16870659..16870675,-!p2@BNC2!0.77!6.10!BNC2;;chr5:92918768..92918783,+!p8@NR2F1!0.76!4.80!NR2F1;;chr1:119530493..119530572,-!p1@TBX15!0.76!4.80!TBX15;;chr15:67430351..67430366,+!p10@SMAD3!0.76!4.80!SMAD3;;chr13:100634130..100634143,+!p3@ZIC2!0.76!4.80!ZIC2;;chr12:66218212..66218244,+!p5@HMGA2!0.75!6.98!HMGA2;;chr8:49833948..49833973,-!p2@SNAI2!0.74!31.39!SNAI2;;chr15:96873861..96873872,+!p9@NR2F2!0.74!10.03!NR2F2;;chr1:151032860..151032918,+!p1@MLLT11!0.73!57.55!MLLT11;;chr12:2986206..2986258,-!p2@FOXM1!0.73!29.21!FOXM1;;chr14:21994449..21994524,-!p2@SALL2!0.73!14.39!SALL2;;chr15:96874244..96874259,+!p5@NR2F2!0.73!11.33!NR2F2;;chr15:80696666..80696700,+!p4@ARNT2!0.73!4.36!ARNT2;;chr19:46800289..46800327,+!p2@HIF3A!0.73!4.36!HIF3A;;chr1:110613276..110613299,-!p2@ALX3!0.73!4.36!ALX3;;chr3:147114260..147114290,-!p3@ZIC4!0.73!4.36!ZIC4;;chr4:109089095..109089144,-!p6@LEF1!0.73!4.36!LEF1;;chr11:125034605..125034636,+!p2@PKNOX2!0.73!4.36!PKNOX2;;chr15:96869255..96869291,+!p6@NR2F2!0.72!8.28!NR2F2;;chr18:19749517..19749531,+!p3@GATA6!0.71!7.85!GATA6;;chr9:130954041..130954121,-!p2@CIZ1!0.70!19.62!CIZ1;;chr12:66218183..66218209,+!p4@HMGA2!0.70!8.28!HMGA2;;chr7:19157043..19157088,-!p2@TWIST1!0.69!10.90!TWIST1;;chr5:72744445..72744466,-!p2@FOXD1!0.69!6.98!FOXD1;;chr20:50721803..50721857,-!p2@ZFP64!0.69!6.54!ZFP64;;chr5:72744336..72744359,-!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ATA6;;chr19:58874112..58874125,-!p1@ZNF497,p5@A1BG!0.22!1.31!ZNF497;;chr12:125002827..125002855,-!p5@NCOR2!0.22!1.31!NCOR2;;chr4:146859887..146859921,-!p3@ZNF827!0.22!1.31!ZNF827;;chr3:170076223..170076242,+!p6@SKIL!0.22!0.87!SKIL;;chr1:170632285..170632309,+!p1@PRRX1!0.22!0.87!PRRX1;;chr17:38504601..38504634,+!p9@RARA!0.22!0.87!RARA;;chr18:53068911..53068935,-!p4@TCF4!0.22!0.87!TCF4;;chr19:19303794..19303805,+!p5@RFXANK!0.22!0.87!RFXANK;;chr9:99180597..99180614,-!p3@ZNF367!0.22!0.87!ZNF367;;chr1:202777535..202777556,-!p1@KDM5B!0.21!49.26!KDM5B;;chr20:44718538..44718612,-!p1@NCOA5!0.21!39.67!NCOA5;;chr1:8877692..8877732,-!p1@RERE!0.21!11.33!RERE;;chr2:60780753..60780800,-!p1@BCL11A!0.21!6.54!BCL11A;;chr7:26191809..26191890,+!p1@NFE2L3!0.21!6.54!NFE2L3;;chr17:47492252..47492265,-!p2@PHB!0.21!5.23!PHB;;chr4:38665883..38665922,+!p3@KLF3!0.21!4.80!KLF3;;chr2:27357446..27357475,-!p2@PREB!0.21!4.36!PREB;;chr14:73360799..73360817,-!p1@DPF3!0.21!4.36!DPF3;;chr2:239756671..239756732,+!p1@TWIST2!0.21!3.92!TWIST2;;chr6:144289132..144289134,-!p3@PLAGL1!0.21!2.62!PLAGL1;;chr13:74708372..74708409,-!p4@KLF12!0.21!2.62!KLF12;;chr4:95128841..95128865,+!p4@SMARCAD1!0.21!2.18!SMARCAD1;;chr13:37494365..37494381,-!p1@SMAD9!0.21!1.74!SMAD9;;chrX:84499081..84499115,+!p2@ZNF711!0.21!1.31!ZNF711;;chr8:128752771..128752843,+!p9@MYC!0.21!1.31!MYC;;chr15:96869292..96869320,+!p15@NR2F2!0.21!1.31!NR2F2;;chr16:67063262..67063273,+!p7@CBFB!0.21!0.87!CBFB;;chr10:21823296..21823309,+!p8@MLLT10!0.21!0.87!MLLT10;;chr2:28616312..28616315,+!p8@FOSL2!0.21!0.87!FOSL2;;chr1:164528687..164528711,+!p6@PBX1!0.21!0.87!PBX1;;chrX:107019163..107019179,-!p7@TSC22D3!0.21!0.87!TSC22D3;;chr11:65686855..65686946,+!p1@DRAP1!0.20!108.12!DRAP1;;chr11:57103327..57103372,-!p1@SSRP1!0.20!67.14!SSRP1;;chr7:4721885..4721945,+!p1@FOXK1!0.20!43.60!FOXK1;;chr10:22292613..22292674,-!p1@DNAJC1!0.20!41.85!DNAJC1;;chr9:137218281..137218340,+!p1@RXRA!0.20!40.54!RXRA;;chr20:62601243..62601291,-!p1@ZNF512B!0.20!13.51!ZNF512B;;chr1:157108180..157108193,-!p2@ETV3!0.20!6.98!ETV3;;chr15:85144229..85144273,+!p1@ZSCAN2!0.20!6.98!ZSCAN2;;chr10:35484804..35484902,+!p2@CREM!0.20!4.80!CREM;;chr6:43337180..43337244,-!p1@ZNF318!0.20!4.80!ZNF318;;chr17:38498402..38498445,+!p3@RARA!0.20!4.36!RARA;;chr8:146012660..146012711,-!p1@ZNF34!0.20!3.92!ZNF34;;chr19:58838369..58838439,+!p1@ZSCAN22!0.20!3.92!ZSCAN22;;chr18:74207147..74207183,-!p1@ZNF516!0.20!3.49!ZNF516;;chr15:100106244..100106259,+!p2@MEF2A!0.20!2.62!MEF2A;;chr15:66994561..66994597,+!p2@SMAD6!0.20!2.62!SMAD6;;chr1:935398..935465,-!p2@HES4!0.20!2.18!HES4;;chr11:47270436..47270464,+!p2@NR1H3!0.20!2.18!NR1H3;;chr12:72058102..72058127,+!p7@THAP2!0.20!1.74!THAP2;;chr5:178368186..178368238,+!p1@ZNF454!0.20!1.74!ZNF454;;chr19:58570605..58570655,+!p1@ZNF135!0.20!1.74!ZNF135;;chr19:4066763..4066779,-!p5@ZBTB7A!0.20!1.31!ZBTB7A;;chr17:41622925..41622976,-!p3@ETV4!0.20!1.31!ETV4;;chr19:3366625..3366629,+!p4@NFIC!0.20!1.31!NFIC;;chr22:42269885..42269899,+!p4@SREBF2!0.20!1.31!SREBF2;;chr19:12175573..12175584,+!p3@ZNF844!0.20!0.87!ZNF844;;chr10:64134120..64134183,+!p1@ZNF365!0.20!0.87!ZNF365;;chr12:26278008..26278024,-!p4@BHLHE41!0.20!0.87!BHLHE41;;chr14:33408072..33408114,+!p2@NPAS3!0.20!0.87!NPAS3;;chr19:47425425..47425441,+!p2@ARHGAP35!0.20!0.87!ARHGAP35;;chr1:150849208..150849217,-!p3@ARNT!0.20!0.87!ARNT;;chr7:4721998..4722013,+!p3@FOXK1!0.20!0.87!FOXK1;;chr20:48807351..48807384,+!p1@CEBPB!0.19!143.87!CEBPB;;chr19:6424813..6424835,-!p1@KHSRP!0.19!87.19!KHSRP;;chr19:6279932..6280000,-!p1@MLLT1!0.19!34.88!MLLT1;;chr12:132628963..132629027,+!p1@NOC4L!0.19!19.62!NOC4L;;chr6:35310312..35310359,+!p1@PPARD!0.19!12.21!PPARD;;chr7:28220198..28220269,-!p2@JAZF1!0.19!11.77!JAZF1;;chr19:42724436..42724507,+!p1@ZNF526!0.19!10.90!ZNF526;;chr19:56879653..56879743,+!p1@ZNF542!0.19!9.59!ZNF542;;chr1:27022164..27022220,+!p2@ARID1A!0.19!9.59!ARID1A;;chr19:57106647..57106686,+!p1@ZNF71!0.19!8.72!ZNF71;;chr6:33285505..33285529,-!p1@ZBTB22!0.19!8.72!ZBTB22;;chr4:146859927..146860055,-!p1@ZNF827!0.19!7.85!ZNF827;;chr19:56652643..56652683,+!p1@ZNF444!0.19!6.98!ZNF444;;chr17:4981745..4981810,+!p1@ZFP3!0.19!6.10!ZFP3;;chr3:150126759..150126784,+!p2@TSC22D2!0.19!5.67!TSC22D2;;chr1:149871114..149871134,+!p3@BOLA1!0.19!4.80!BOLA1;;chr12:3068466..3068495,+!p3@TEAD4!0.19!2.18!TEAD4;;chr1:247171347..247171366,-!p2@ZNF695!0.19!1.74!ZNF695;;chr3:141121847..141121868,+!p5@ZBTB38!0.19!1.31!ZBTB38;;chr6:45390442..45390479,+!p8@RUNX2!0.19!1.31!RUNX2;;chr8:99956662..99956684,+!p1@OSR2!0.19!1.31!OSR2;;chr16:30569604..30569629,-!p3@ZNF764!0.19!1.31!ZNF764;;chr12:10875768..10875808,-!p3@CSDA!0.19!1.31!CSDA;;chr12:56583297..56583304,-!p4@SMARCC2!0.19!1.31!SMARCC2;;chr11:19263192..19263222,-!p2@E2F8!0.19!0.87!E2F8;;chr12:66218003..66218018,+!p9@HMGA2!0.19!0.87!HMGA2;;chr5:150284461..150284481,-!p4@ZNF300!0.19!0.87!ZNF300;;chr6:10415276..10415341,-!p2@TFAP2A!0.19!0.87!TFAP2A;;chr7:99679381..99679392,-!p4@ZNF3!0.19!0.87!ZNF3;;chr8:28748052..28748063,+!p4@HMBOX1!0.19!0.87!HMBOX1;;chr19:58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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000327;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000499;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000708 | |||
|ffid_belonging_in_development=CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 43: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|is_a=EFO:0002091;;FF: | |hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Meningeal%2520Cells%252c%2520donor2.CNhs12080.11573-120E7.hg19.nobarcode.bam | ||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Meningeal%2520Cells%252c%2520donor2.CNhs12080.11573-120E7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Meningeal%2520Cells%252c%2520donor2.CNhs12080.11573-120E7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Meningeal%2520Cells%252c%2520donor2.CNhs12080.11573-120E7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Meningeal%2520Cells%252c%2520donor2.CNhs12080.11573-120E7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11573-120E7 | |||
|is_a=EFO:0002091;;FF:0000091 | |||
|is_obsolete= | |||
|library_id=CNhs12080 | |||
|library_id_phase_based=2:CNhs12080 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11573 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10002.ATGTCA.11573 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11573 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10002.ATGTCA.11573 | |||
|name=Meningeal Cells, donor2 | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs12080,LSID838,release011,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=SRhi10002,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.00317566686985504,0,-0.277362132193514,0.122178588379461,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,0.0241857734376688,0,0,0,0,0,0,0,0,0,0,0,0,-0.0673285353577474,0,0,0,0,0,0,0,0,0.054356160495431,0,0,0,0.157142363216531,0,0.0282361732279469,0.272287316351565,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0725030219529167,0,0,0,-0.0584468268118252,-0.132626221087603,0,0.157142363216531,0,0,-0.0980353512377064,-0.0599060191926295,0,0,0,0,0,0,0.157142363216531,0,0,0,0,0,0,0,0,0,0,-0.0178024123141955,0,0,0,-0.129448189001493,-0.494946288593714,0,0,0,0,0,0 | |||
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| |||
|rna_box=120 | |||
|rna_catalog_number=SC1405 | |||
|rna_concentration=1.38 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0 | |||
|rna_lot_number= | |||
|rna_od260/230= | |||
|rna_od260/280= | |||
|rna_position=E7 | |||
|rna_rin=9.6 | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=1.20E+09 | |||
|rna_weight_ug=10 | |||
|rnaseq_library_id=SRhi10002.ATGTCA | |||
|sample_age= | |||
|sample_category=primary cells | |||
|sample_cell_catalog=lot:0024 | |||
|sample_cell_line= | |||
|sample_cell_lot=N/A | |||
|sample_cell_type=meningeal cell | |||
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest) | |||
|sample_company=Sciencell/3H | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.10358377142307e-229!GO:0005737;cytoplasm;1.65183465060334e-188!GO:0043226;organelle;1.56334888624021e-185!GO:0043229;intracellular organelle;2.43326704787303e-185!GO:0043231;intracellular membrane-bound organelle;9.55362648006075e-184!GO:0043227;membrane-bound organelle;2.66171445679521e-183!GO:0044422;organelle part;6.74588417708108e-139!GO:0044446;intracellular organelle part;1.0755846203237e-137!GO:0044444;cytoplasmic part;2.77056170864213e-137!GO:0032991;macromolecular complex;1.65809795559978e-94!GO:0030529;ribonucleoprotein complex;1.09009456620653e-81!GO:0044237;cellular metabolic process;1.46689629950455e-78!GO:0044238;primary metabolic process;1.92066184970566e-78!GO:0005515;protein binding;5.13125595487911e-76!GO:0005739;mitochondrion;6.15844015642211e-70!GO:0043170;macromolecule metabolic process;1.670466469983e-69!GO:0043233;organelle lumen;1.670466469983e-69!GO:0031974;membrane-enclosed lumen;1.670466469983e-69!GO:0005634;nucleus;5.63140178020845e-66!GO:0003723;RNA binding;1.29818293449858e-65!GO:0044428;nuclear part;4.37993707983204e-64!GO:0031090;organelle membrane;8.7656166041886e-53!GO:0005840;ribosome;5.63265074406915e-52!GO:0016043;cellular component organization and biogenesis;1.8303310238619e-50!GO:0044429;mitochondrial part;3.12158754359779e-48!GO:0043234;protein complex;4.20846373234472e-48!GO:0006412;translation;4.94996609107904e-48!GO:0003735;structural constituent of ribosome;1.15407904606443e-46!GO:0019538;protein metabolic process;1.39401185240049e-46!GO:0031967;organelle envelope;2.59484305165797e-43!GO:0006396;RNA processing;3.2079307305689e-43!GO:0031975;envelope;6.47853067980361e-43!GO:0009058;biosynthetic process;1.05152056472889e-42!GO:0044260;cellular macromolecule metabolic process;8.63356122169916e-42!GO:0044267;cellular protein metabolic process;5.59819954947109e-41!GO:0033279;ribosomal subunit;1.00140064412535e-40!GO:0044249;cellular biosynthetic process;1.21222480003663e-40!GO:0031981;nuclear lumen;1.89191766853463e-39!GO:0033036;macromolecule localization;2.80427000672683e-39!GO:0009059;macromolecule biosynthetic process;1.53957841062106e-38!GO:0015031;protein transport;1.86784168123763e-38!GO:0005829;cytosol;2.38770324198309e-37!GO:0008104;protein localization;2.41432607024899e-36!GO:0045184;establishment of protein localization;4.06818643699887e-36!GO:0006996;organelle organization and biogenesis;1.73752003198965e-35!GO:0043283;biopolymer metabolic process;2.11155570661644e-34!GO:0046907;intracellular transport;8.12630574021607e-34!GO:0016071;mRNA metabolic process;1.36095073845772e-33!GO:0005740;mitochondrial envelope;1.48999585994889e-32!GO:0043228;non-membrane-bound organelle;6.3261491038491e-32!GO:0043232;intracellular non-membrane-bound organelle;6.3261491038491e-32!GO:0010467;gene expression;7.47574542332568e-32!GO:0008380;RNA splicing;1.66718537799477e-30!GO:0031966;mitochondrial membrane;2.02254229947004e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.26358269321302e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.37743646712688e-30!GO:0019866;organelle inner membrane;3.96454037287155e-29!GO:0006397;mRNA processing;7.60908860382803e-29!GO:0065003;macromolecular complex assembly;8.36679371907028e-29!GO:0006886;intracellular protein transport;7.35097925843683e-28!GO:0005743;mitochondrial inner membrane;2.15738183698549e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.57589993157811e-27!GO:0022607;cellular component assembly;3.13253132523329e-26!GO:0006259;DNA metabolic process;5.49587818764545e-25!GO:0044445;cytosolic part;4.41478582053237e-24!GO:0005654;nucleoplasm;1.15652960614657e-23!GO:0006119;oxidative phosphorylation;1.35932382959585e-22!GO:0005783;endoplasmic reticulum;2.93737739823568e-22!GO:0051649;establishment of cellular localization;5.47057578440208e-22!GO:0007049;cell cycle;8.56187053926727e-22!GO:0051641;cellular localization;1.10652380316324e-21!GO:0005681;spliceosome;1.14716281435368e-21!GO:0015934;large ribosomal subunit;4.23381170373697e-21!GO:0012505;endomembrane system;9.5803246355885e-21!GO:0015935;small ribosomal subunit;1.15698445864386e-20!GO:0044455;mitochondrial membrane part;1.62270890973823e-20!GO:0044451;nucleoplasm part;4.08054392172661e-20!GO:0006457;protein folding;1.45000204492152e-19!GO:0031980;mitochondrial lumen;2.98112941572878e-19!GO:0005759;mitochondrial matrix;2.98112941572878e-19!GO:0044432;endoplasmic reticulum part;7.41337370878684e-19!GO:0000166;nucleotide binding;9.72926940604434e-19!GO:0016462;pyrophosphatase activity;1.84216156522551e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.54816731264843e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;3.24564024729871e-18!GO:0017111;nucleoside-triphosphatase activity;8.72796330255889e-18!GO:0022402;cell cycle process;1.0959131668983e-17!GO:0005746;mitochondrial respiratory chain;1.44821962817976e-17!GO:0048770;pigment granule;1.51972975792913e-17!GO:0042470;melanosome;1.51972975792913e-17!GO:0003676;nucleic acid binding;6.17172397303942e-17!GO:0000278;mitotic cell cycle;1.01957046888371e-16!GO:0051186;cofactor metabolic process;1.67699653241409e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.20133221093613e-16!GO:0005730;nucleolus;5.49578383936735e-16!GO:0050136;NADH dehydrogenase (quinone) activity;7.5897700633836e-16!GO:0003954;NADH dehydrogenase activity;7.5897700633836e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.5897700633836e-16!GO:0016874;ligase activity;9.96738329183699e-16!GO:0022618;protein-RNA complex assembly;1.14867260376805e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.45134973619949e-15!GO:0008134;transcription factor binding;1.60077467024459e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.00042631433971e-15!GO:0044265;cellular macromolecule catabolic process;1.15820227314176e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.27398267853262e-14!GO:0005794;Golgi apparatus;1.41274941744288e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.50560287298214e-14!GO:0042773;ATP synthesis coupled electron transport;2.50560287298214e-14!GO:0006605;protein targeting;3.76809403343742e-14!GO:0005761;mitochondrial ribosome;3.85529802727666e-14!GO:0000313;organellar ribosome;3.85529802727666e-14!GO:0051082;unfolded protein binding;4.51827795668555e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.48381358330568e-14!GO:0045271;respiratory chain complex I;5.48381358330568e-14!GO:0005747;mitochondrial respiratory chain complex I;5.48381358330568e-14!GO:0006512;ubiquitin cycle;5.51181614692097e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.24832243699812e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.63182991467099e-13!GO:0048193;Golgi vesicle transport;2.26953328171984e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.26953328171984e-13!GO:0005789;endoplasmic reticulum membrane;2.78425019967914e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.00962681043112e-13!GO:0006732;coenzyme metabolic process;4.38476331974222e-13!GO:0044248;cellular catabolic process;4.77411004345638e-13!GO:0008135;translation factor activity, nucleic acid binding;5.10940072491165e-13!GO:0051276;chromosome organization and biogenesis;5.11828442617632e-13!GO:0044257;cellular protein catabolic process;5.11828442617632e-13!GO:0043285;biopolymer catabolic process;5.60150888733741e-13!GO:0019941;modification-dependent protein catabolic process;5.88239761016432e-13!GO:0043632;modification-dependent macromolecule catabolic process;5.88239761016432e-13!GO:0006511;ubiquitin-dependent protein catabolic process;8.51714711323003e-13!GO:0009057;macromolecule catabolic process;1.24417571961162e-12!GO:0032553;ribonucleotide binding;1.36390897400864e-12!GO:0032555;purine ribonucleotide binding;1.36390897400864e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.39825789259223e-12!GO:0000375;RNA splicing, via transesterification reactions;1.39825789259223e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.39825789259223e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;4.82622623589426e-12!GO:0017076;purine nucleotide binding;6.09458275921427e-12!GO:0005635;nuclear envelope;8.34740517289865e-12!GO:0005793;ER-Golgi intermediate compartment;1.03376729893315e-11!GO:0042254;ribosome biogenesis and assembly;1.05768247296626e-11!GO:0022403;cell cycle phase;1.06754270569592e-11!GO:0016070;RNA metabolic process;1.35556285768145e-11!GO:0000087;M phase of mitotic cell cycle;1.50683611813593e-11!GO:0007067;mitosis;1.63672704975211e-11!GO:0006974;response to DNA damage stimulus;1.64929538370144e-11!GO:0016192;vesicle-mediated transport;1.74440122741817e-11!GO:0043412;biopolymer modification;1.77983739700523e-11!GO:0031965;nuclear membrane;1.89213700869827e-11!GO:0006323;DNA packaging;2.50325494164316e-11!GO:0005694;chromosome;4.08214280878902e-11!GO:0030163;protein catabolic process;6.13484369869699e-11!GO:0009055;electron carrier activity;8.6277818020153e-11!GO:0005524;ATP binding;1.55339174386395e-10!GO:0032559;adenyl ribonucleotide binding;1.96659712100493e-10!GO:0051301;cell division;2.19613086216749e-10!GO:0044427;chromosomal part;2.20695753975863e-10!GO:0000074;regulation of progression through cell cycle;2.23094635511083e-10!GO:0051726;regulation of cell cycle;2.2484211558645e-10!GO:0006464;protein modification process;3.67118622195191e-10!GO:0003712;transcription cofactor activity;4.51418143435573e-10!GO:0044453;nuclear membrane part;5.30836043709574e-10!GO:0003743;translation initiation factor activity;5.48861261907335e-10!GO:0006413;translational initiation;5.96785674382966e-10!GO:0006260;DNA replication;8.17663790118209e-10!GO:0009259;ribonucleotide metabolic process;8.18290782827698e-10!GO:0006163;purine nucleotide metabolic process;9.29744756214829e-10!GO:0006399;tRNA metabolic process;1.1211075458689e-09!GO:0030554;adenyl nucleotide binding;1.1211075458689e-09!GO:0016887;ATPase activity;1.92194170601888e-09!GO:0016604;nuclear body;1.94228764756708e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.22727913638541e-09!GO:0042623;ATPase activity, coupled;2.32565407132701e-09!GO:0006281;DNA repair;3.18223481789701e-09!GO:0009150;purine ribonucleotide metabolic process;3.59791714870106e-09!GO:0006913;nucleocytoplasmic transport;4.47024465121222e-09!GO:0012501;programmed cell death;4.47024465121222e-09!GO:0006164;purine nucleotide biosynthetic process;4.92349679554046e-09!GO:0000279;M phase;5.77477681451195e-09!GO:0006333;chromatin assembly or disassembly;6.33758885747081e-09!GO:0008565;protein transporter activity;6.62984487923618e-09!GO:0051188;cofactor biosynthetic process;6.83802554993847e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.37999355996633e-09!GO:0051169;nuclear transport;8.67014459518768e-09!GO:0065004;protein-DNA complex assembly;9.05506416181431e-09!GO:0006915;apoptosis;9.05506416181431e-09!GO:0043687;post-translational protein modification;1.01581401332148e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.02567581802722e-08!GO:0006446;regulation of translational initiation;1.04289720961984e-08!GO:0009060;aerobic respiration;1.12899542268525e-08!GO:0009260;ribonucleotide biosynthetic process;1.43569382844184e-08!GO:0065002;intracellular protein transport across a membrane;1.57041511127304e-08!GO:0009719;response to endogenous stimulus;1.6044492930292e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.81479384584328e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.2797436671312e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.44044876645789e-08!GO:0004812;aminoacyl-tRNA ligase activity;3.44044876645789e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.44044876645789e-08!GO:0009141;nucleoside triphosphate metabolic process;4.65116493793414e-08!GO:0006364;rRNA processing;4.85751761684626e-08!GO:0005643;nuclear pore;5.74497045335755e-08!GO:0005788;endoplasmic reticulum lumen;5.87363405115063e-08!GO:0030120;vesicle coat;5.94862006340011e-08!GO:0030662;coated vesicle membrane;5.94862006340011e-08!GO:0017038;protein import;6.33850013584617e-08!GO:0006888;ER to Golgi vesicle-mediated transport;7.09176146587944e-08!GO:0009199;ribonucleoside triphosphate metabolic process;7.18001750405044e-08!GO:0006461;protein complex assembly;7.43013349004953e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.77223439976062e-08!GO:0008219;cell death;8.4128806635275e-08!GO:0016265;death;8.4128806635275e-08!GO:0015986;ATP synthesis coupled proton transport;8.92134810468259e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.92134810468259e-08!GO:0004386;helicase activity;9.22898810974237e-08!GO:0043038;amino acid activation;9.91255355243841e-08!GO:0006418;tRNA aminoacylation for protein translation;9.91255355243841e-08!GO:0043039;tRNA aminoacylation;9.91255355243841e-08!GO:0000785;chromatin;1.02763595800316e-07!GO:0008026;ATP-dependent helicase activity;1.13828142644623e-07!GO:0006334;nucleosome assembly;1.23823917249152e-07!GO:0016072;rRNA metabolic process;1.2398848317228e-07!GO:0008639;small protein conjugating enzyme activity;1.35577306591034e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.35577306591034e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.35577306591034e-07!GO:0045333;cellular respiration;1.5189968235054e-07!GO:0009117;nucleotide metabolic process;1.54084879596867e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.80245851232972e-07!GO:0048523;negative regulation of cellular process;1.86971569930025e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.92692507883222e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.92692507883222e-07!GO:0016607;nuclear speck;1.9784341761086e-07!GO:0004842;ubiquitin-protein ligase activity;2.1131176595414e-07!GO:0048475;coated membrane;2.585335256314e-07!GO:0030117;membrane coat;2.585335256314e-07!GO:0046930;pore complex;2.59053577406941e-07!GO:0006099;tricarboxylic acid cycle;2.99420507058324e-07!GO:0046356;acetyl-CoA catabolic process;2.99420507058324e-07!GO:0031497;chromatin assembly;3.37479137823755e-07!GO:0015630;microtubule cytoskeleton;3.55447194715981e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.79745939756552e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.79745939756552e-07!GO:0009056;catabolic process;3.89103195735453e-07!GO:0019787;small conjugating protein ligase activity;4.12877227338827e-07!GO:0016568;chromatin modification;4.12937214566759e-07!GO:0046034;ATP metabolic process;4.29252234377776e-07!GO:0005768;endosome;4.49329986124632e-07!GO:0016853;isomerase activity;4.9892043660987e-07!GO:0006366;transcription from RNA polymerase II promoter;5.01072687188872e-07!GO:0006084;acetyl-CoA metabolic process;5.74093439355625e-07!GO:0009109;coenzyme catabolic process;8.76212186912091e-07!GO:0005667;transcription factor complex;8.9699095184202e-07!GO:0051246;regulation of protein metabolic process;8.9699095184202e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.9699095184202e-07!GO:0009108;coenzyme biosynthetic process;9.76796379468025e-07!GO:0006754;ATP biosynthetic process;9.76796379468025e-07!GO:0006753;nucleoside phosphate metabolic process;9.76796379468025e-07!GO:0051187;cofactor catabolic process;1.2185833095917e-06!GO:0007005;mitochondrion organization and biogenesis;1.26332766588394e-06!GO:0045259;proton-transporting ATP synthase complex;1.29998756389638e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.42276841990925e-06!GO:0019829;cation-transporting ATPase activity;1.5182488342292e-06!GO:0006403;RNA localization;2.12363015753889e-06!GO:0031988;membrane-bound vesicle;2.16958355839699e-06!GO:0050657;nucleic acid transport;2.33394311047608e-06!GO:0051236;establishment of RNA localization;2.33394311047608e-06!GO:0050658;RNA transport;2.33394311047608e-06!GO:0003924;GTPase activity;2.45838280288676e-06!GO:0003697;single-stranded DNA binding;2.64337765702321e-06!GO:0045786;negative regulation of progression through cell cycle;2.70413916570557e-06!GO:0016881;acid-amino acid ligase activity;2.91625615478265e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.07973101737277e-06!GO:0008654;phospholipid biosynthetic process;3.16349483167188e-06!GO:0016740;transferase activity;3.17308890813798e-06!GO:0048519;negative regulation of biological process;4.39454150533202e-06!GO:0005839;proteasome core complex (sensu Eukaryota);5.3332245870104e-06!GO:0044431;Golgi apparatus part;6.11566665574122e-06!GO:0031252;leading edge;6.14378173685612e-06!GO:0006752;group transfer coenzyme metabolic process;7.89191792364879e-06!GO:0051329;interphase of mitotic cell cycle;9.07462263966352e-06!GO:0000245;spliceosome assembly;1.03712048494515e-05!GO:0016779;nucleotidyltransferase activity;1.0834215106862e-05!GO:0005762;mitochondrial large ribosomal subunit;1.1171607434275e-05!GO:0000315;organellar large ribosomal subunit;1.1171607434275e-05!GO:0007010;cytoskeleton organization and biogenesis;1.25327810815867e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.29841092379439e-05!GO:0016859;cis-trans isomerase activity;1.3252661431553e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.34625749619262e-05!GO:0005770;late endosome;1.35282963237777e-05!GO:0032446;protein modification by small protein conjugation;1.3583133592617e-05!GO:0016491;oxidoreductase activity;1.39320506002372e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.39324081763928e-05!GO:0005773;vacuole;1.55389794525382e-05!GO:0008361;regulation of cell size;1.79881451839607e-05!GO:0006091;generation of precursor metabolites and energy;1.93184199179639e-05!GO:0045454;cell redox homeostasis;1.94412050594573e-05!GO:0016049;cell growth;1.96065397533182e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.1119892240138e-05!GO:0043067;regulation of programmed cell death;2.13829123322096e-05!GO:0043566;structure-specific DNA binding;2.20236014023811e-05!GO:0016567;protein ubiquitination;2.21062415780662e-05!GO:0050794;regulation of cellular process;2.26778768421818e-05!GO:0042981;regulation of apoptosis;2.44157651987529e-05!GO:0051170;nuclear import;2.44587250997335e-05!GO:0003714;transcription corepressor activity;2.57393102368188e-05!GO:0031410;cytoplasmic vesicle;3.05598409221797e-05!GO:0006606;protein import into nucleus;3.06425945095404e-05!GO:0031982;vesicle;3.27953859615858e-05!GO:0005798;Golgi-associated vesicle;3.40851575796895e-05!GO:0016787;hydrolase activity;3.57112101293917e-05!GO:0051325;interphase;3.77701962763183e-05!GO:0051028;mRNA transport;3.8710980242349e-05!GO:0006793;phosphorus metabolic process;3.95223533958159e-05!GO:0006796;phosphate metabolic process;3.95223533958159e-05!GO:0051427;hormone receptor binding;3.95465624150211e-05!GO:0004298;threonine endopeptidase activity;3.95636431016864e-05!GO:0003713;transcription coactivator activity;3.97534230768196e-05!GO:0016563;transcription activator activity;4.16227639806068e-05!GO:0006613;cotranslational protein targeting to membrane;4.31627772518437e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.33069534811214e-05!GO:0005905;coated pit;4.88283813615583e-05!GO:0005791;rough endoplasmic reticulum;5.22368389730569e-05!GO:0019843;rRNA binding;5.31050904996365e-05!GO:0005813;centrosome;5.47961188807094e-05!GO:0005819;spindle;5.53526069243024e-05!GO:0044440;endosomal part;6.1735349354258e-05!GO:0010008;endosome membrane;6.1735349354258e-05!GO:0015980;energy derivation by oxidation of organic compounds;6.46514201586587e-05!GO:0001558;regulation of cell growth;7.0021590228838e-05!GO:0043069;negative regulation of programmed cell death;7.10379885140305e-05!GO:0030133;transport vesicle;7.12971036516988e-05!GO:0031324;negative regulation of cellular metabolic process;7.32714496912965e-05!GO:0030867;rough endoplasmic reticulum membrane;7.97982053284346e-05!GO:0043623;cellular protein complex assembly;8.06139136013553e-05!GO:0035257;nuclear hormone receptor binding;8.36474035946774e-05!GO:0016564;transcription repressor activity;9.25470042847964e-05!GO:0046474;glycerophospholipid biosynthetic process;9.65182383096142e-05!GO:0000151;ubiquitin ligase complex;0.000101374536059079!GO:0033116;ER-Golgi intermediate compartment membrane;0.000103902750264843!GO:0016310;phosphorylation;0.000105475041321042!GO:0000323;lytic vacuole;0.00011231101899206!GO:0005764;lysosome;0.00011231101899206!GO:0003899;DNA-directed RNA polymerase activity;0.000114339301602501!GO:0043066;negative regulation of apoptosis;0.000135542069898553!GO:0019867;outer membrane;0.000135542069898553!GO:0030029;actin filament-based process;0.000149762551501624!GO:0005815;microtubule organizing center;0.000154296973028422!GO:0031968;organelle outer membrane;0.000154296973028422!GO:0003724;RNA helicase activity;0.000154296973028422!GO:0006916;anti-apoptosis;0.000169092742841333!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000175163406223886!GO:0009165;nucleotide biosynthetic process;0.000176294974395647!GO:0019899;enzyme binding;0.000178875453060892!GO:0005769;early endosome;0.000213856810139199!GO:0000139;Golgi membrane;0.000215907275568562!GO:0005525;GTP binding;0.000226396895425027!GO:0008250;oligosaccharyl transferase complex;0.00024301984797938!GO:0000314;organellar small ribosomal subunit;0.000244148086272538!GO:0005763;mitochondrial small ribosomal subunit;0.000244148086272538!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000291665791381938!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000298641807438691!GO:0044262;cellular carbohydrate metabolic process;0.000383730690410448!GO:0007051;spindle organization and biogenesis;0.000383730690410448!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000387342410037833!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000436828128990584!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000436888725667806!GO:0005741;mitochondrial outer membrane;0.000440227922945443!GO:0005048;signal sequence binding;0.000440227922945443!GO:0004576;oligosaccharyl transferase activity;0.000456442820466782!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00046965299638657!GO:0016126;sterol biosynthetic process;0.000502475018876235!GO:0051789;response to protein stimulus;0.000544262020781687!GO:0006986;response to unfolded protein;0.000544262020781687!GO:0006612;protein targeting to membrane;0.000544262020781687!GO:0018196;peptidyl-asparagine modification;0.000545206427498828!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000545206427498828!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00056850598957263!GO:0006261;DNA-dependent DNA replication;0.00056912773174664!GO:0009892;negative regulation of metabolic process;0.000581732461036719!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000589480783830522!GO:0050789;regulation of biological process;0.000645569627356353!GO:0008610;lipid biosynthetic process;0.000718586122991575!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00077540303906863!GO:0043681;protein import into mitochondrion;0.00077540303906863!GO:0043021;ribonucleoprotein binding;0.000822976095572287!GO:0000786;nucleosome;0.000856194360303076!GO:0032561;guanyl ribonucleotide binding;0.000860767604752972!GO:0019001;guanyl nucleotide binding;0.000860767604752972!GO:0005885;Arp2/3 protein complex;0.000892231934006416!GO:0008092;cytoskeletal protein binding;0.00089281070401208!GO:0046467;membrane lipid biosynthetic process;0.00090456222502768!GO:0008094;DNA-dependent ATPase activity;0.000921330156587077!GO:0046489;phosphoinositide biosynthetic process;0.000956621295428977!GO:0051920;peroxiredoxin activity;0.000999645192961162!GO:0031072;heat shock protein binding;0.00105398759502105!GO:0006839;mitochondrial transport;0.00106896073344823!GO:0030132;clathrin coat of coated pit;0.00112623384188991!GO:0006626;protein targeting to mitochondrion;0.00113594717387228!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00114224128973624!GO:0044452;nucleolar part;0.00116978312545135!GO:0005684;U2-dependent spliceosome;0.00120212582751187!GO:0042802;identical protein binding;0.0012356647307472!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00149658689760553!GO:0007040;lysosome organization and biogenesis;0.00154392764707163!GO:0000075;cell cycle checkpoint;0.00158078802859277!GO:0035258;steroid hormone receptor binding;0.00158547936471082!GO:0048522;positive regulation of cellular process;0.00173385916533886!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00189028329759203!GO:0030658;transport vesicle membrane;0.00189249510682618!GO:0016363;nuclear matrix;0.00191635738026032!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00194088450208871!GO:0030663;COPI coated vesicle membrane;0.00194088450208871!GO:0030126;COPI vesicle coat;0.00194088450208871!GO:0008033;tRNA processing;0.00196967665951776!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00203417193585002!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00203417193585002!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00203417193585002!GO:0040008;regulation of growth;0.00203637941876848!GO:0016044;membrane organization and biogenesis;0.00206470352374659!GO:0048471;perinuclear region of cytoplasm;0.00212520686245758!GO:0006082;organic acid metabolic process;0.00212520686245758!GO:0006695;cholesterol biosynthetic process;0.00213080663444154!GO:0019752;carboxylic acid metabolic process;0.00215801280894338!GO:0008186;RNA-dependent ATPase activity;0.0022884117551399!GO:0030118;clathrin coat;0.00236768970098912!GO:0030027;lamellipodium;0.00237321930091582!GO:0005657;replication fork;0.00237407707167554!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00243053073818179!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00243053073818179!GO:0016125;sterol metabolic process;0.00244801197786139!GO:0030134;ER to Golgi transport vesicle;0.00248001866166129!GO:0051168;nuclear export;0.00254479353429684!GO:0022890;inorganic cation transmembrane transporter activity;0.0025983676488876!GO:0006414;translational elongation;0.00262642581056831!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00262642581056831!GO:0006818;hydrogen transport;0.00266331063594292!GO:0016481;negative regulation of transcription;0.00278494247537276!GO:0030880;RNA polymerase complex;0.00298902034945568!GO:0015992;proton transport;0.00300252940013214!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00318250631034035!GO:0015002;heme-copper terminal oxidase activity;0.00318250631034035!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00318250631034035!GO:0004129;cytochrome-c oxidase activity;0.00318250631034035!GO:0007006;mitochondrial membrane organization and biogenesis;0.00327503237852053!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00347054540844114!GO:0000775;chromosome, pericentric region;0.00348983712742597!GO:0006891;intra-Golgi vesicle-mediated transport;0.00348983712742597!GO:0030127;COPII vesicle coat;0.00354607103550076!GO:0012507;ER to Golgi transport vesicle membrane;0.00354607103550076!GO:0048487;beta-tubulin binding;0.00365478377245498!GO:0030137;COPI-coated vesicle;0.00377991094660316!GO:0003729;mRNA binding;0.00381556999322167!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00381556999322167!GO:0017166;vinculin binding;0.00383711999282353!GO:0006402;mRNA catabolic process;0.00391118611705581!GO:0000096;sulfur amino acid metabolic process;0.00399749729334997!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00406173180828594!GO:0007033;vacuole organization and biogenesis;0.00407029961184317!GO:0003682;chromatin binding;0.00422760298396376!GO:0030176;integral to endoplasmic reticulum membrane;0.00436959024660658!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00445094128022492!GO:0005874;microtubule;0.00445379076038934!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00468294588618261!GO:0015399;primary active transmembrane transporter activity;0.00468294588618261!GO:0000059;protein import into nucleus, docking;0.00476586554090587!GO:0032508;DNA duplex unwinding;0.00483026149417806!GO:0032392;DNA geometric change;0.00483026149417806!GO:0003678;DNA helicase activity;0.00500009958013288!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00509778043958746!GO:0043488;regulation of mRNA stability;0.00511169798876455!GO:0043487;regulation of RNA stability;0.00511169798876455!GO:0007243;protein kinase cascade;0.00522247683820286!GO:0048500;signal recognition particle;0.00522433023614894!GO:0030660;Golgi-associated vesicle membrane;0.00541947069403929!GO:0051287;NAD binding;0.00578283178985816!GO:0004004;ATP-dependent RNA helicase activity;0.00580840332141025!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00591088363856124!GO:0006520;amino acid metabolic process;0.00598120780465283!GO:0006740;NADPH regeneration;0.00598120780465283!GO:0006098;pentose-phosphate shunt;0.00598120780465283!GO:0007346;regulation of progression through mitotic cell cycle;0.00601892320833764!GO:0051252;regulation of RNA metabolic process;0.00604851526201708!GO:0045941;positive regulation of transcription;0.00617135889743574!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00634911830374929!GO:0000428;DNA-directed RNA polymerase complex;0.00634911830374929!GO:0051087;chaperone binding;0.0063732642692629!GO:0001726;ruffle;0.0064170662368721!GO:0051101;regulation of DNA binding;0.00712610070000194!GO:0016197;endosome transport;0.0073135639515072!GO:0008139;nuclear localization sequence binding;0.00759092135685556!GO:0006383;transcription from RNA polymerase III promoter;0.0076798068710617!GO:0016860;intramolecular oxidoreductase activity;0.00779693989356177!GO:0030659;cytoplasmic vesicle membrane;0.00789907752183967!GO:0006401;RNA catabolic process;0.00797077014849654!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00812963838472771!GO:0000082;G1/S transition of mitotic cell cycle;0.00812963838472771!GO:0043284;biopolymer biosynthetic process;0.00815788541401794!GO:0006595;polyamine metabolic process;0.00867494678105909!GO:0031902;late endosome membrane;0.00879033325871451!GO:0007050;cell cycle arrest;0.00911498386703709!GO:0006650;glycerophospholipid metabolic process;0.00911812968773787!GO:0003684;damaged DNA binding;0.00928682273458097!GO:0006778;porphyrin metabolic process;0.0095382248753622!GO:0033013;tetrapyrrole metabolic process;0.0095382248753622!GO:0006979;response to oxidative stress;0.00976201243282726!GO:0030521;androgen receptor signaling pathway;0.00977977958241689!GO:0046483;heterocycle metabolic process;0.00987463546337519!GO:0006268;DNA unwinding during replication;0.00990438142879068!GO:0045893;positive regulation of transcription, DNA-dependent;0.00994045529342277!GO:0008312;7S RNA binding;0.0100513815382784!GO:0065009;regulation of a molecular function;0.0102724653086077!GO:0005869;dynactin complex;0.0103032730346918!GO:0016272;prefoldin complex;0.0107706469040311!GO:0000049;tRNA binding;0.0107943549700116!GO:0006779;porphyrin biosynthetic process;0.0109731786676463!GO:0033014;tetrapyrrole biosynthetic process;0.0109731786676463!GO:0005774;vacuolar membrane;0.0109731786676463!GO:0042158;lipoprotein biosynthetic process;0.0110947086524392!GO:0016741;transferase activity, transferring one-carbon groups;0.0113885194559665!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0113970125351426!GO:0030041;actin filament polymerization;0.0116531726550241!GO:0006506;GPI anchor biosynthetic process;0.0116720595549449!GO:0005862;muscle thin filament tropomyosin;0.0118274933296101!GO:0006509;membrane protein ectodomain proteolysis;0.011842387513423!GO:0033619;membrane protein proteolysis;0.011842387513423!GO:0005637;nuclear inner membrane;0.0122191561630192!GO:0008168;methyltransferase activity;0.0130451074964687!GO:0030125;clathrin vesicle coat;0.0130451074964687!GO:0030665;clathrin coated vesicle membrane;0.0130451074964687!GO:0006497;protein amino acid lipidation;0.013061780262263!GO:0015631;tubulin binding;0.0134380627928717!GO:0008286;insulin receptor signaling pathway;0.0134542773239698!GO:0008652;amino acid biosynthetic process;0.0139661697145753!GO:0031124;mRNA 3'-end processing;0.0140111970506999!GO:0031543;peptidyl-proline dioxygenase activity;0.0141239507495926!GO:0019798;procollagen-proline dioxygenase activity;0.0141444236913102!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0143206596581524!GO:0045047;protein targeting to ER;0.0143206596581524!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.01536722685232!GO:0008154;actin polymerization and/or depolymerization;0.0163878656513977!GO:0006505;GPI anchor metabolic process;0.0164508523976189!GO:0007264;small GTPase mediated signal transduction;0.0166502237364023!GO:0000339;RNA cap binding;0.0166507851884375!GO:0030119;AP-type membrane coat adaptor complex;0.016880246803961!GO:0042168;heme metabolic process;0.0176128878097508!GO:0044433;cytoplasmic vesicle part;0.0176128878097508!GO:0003711;transcription elongation regulator activity;0.0182271177549749!GO:0031272;regulation of pseudopodium formation;0.0182764375790481!GO:0031269;pseudopodium formation;0.0182764375790481!GO:0031344;regulation of cell projection organization and biogenesis;0.0182764375790481!GO:0031268;pseudopodium organization and biogenesis;0.0182764375790481!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0182764375790481!GO:0031274;positive regulation of pseudopodium formation;0.0182764375790481!GO:0003746;translation elongation factor activity;0.0187849864830428!GO:0008203;cholesterol metabolic process;0.0187849864830428!GO:0031901;early endosome membrane;0.0190945697526812!GO:0005832;chaperonin-containing T-complex;0.0194854978337964!GO:0045045;secretory pathway;0.0196932746728327!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0196932746728327!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0196932746728327!GO:0031529;ruffle organization and biogenesis;0.0197132526155075!GO:0006783;heme biosynthetic process;0.0198648139473559!GO:0051128;regulation of cellular component organization and biogenesis;0.0202117037450399!GO:0030384;phosphoinositide metabolic process;0.0202672618923752!GO:0000209;protein polyubiquitination;0.0209318145295823!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0214130792554879!GO:0048518;positive regulation of biological process;0.0216808718530768!GO:0043492;ATPase activity, coupled to movement of substances;0.0217307969322354!GO:0005758;mitochondrial intermembrane space;0.021827432174145!GO:0006611;protein export from nucleus;0.0219244160489355!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0223186697601464!GO:0006790;sulfur metabolic process;0.0223567724230925!GO:0030833;regulation of actin filament polymerization;0.0226277598877707!GO:0051098;regulation of binding;0.0230958550760031!GO:0004003;ATP-dependent DNA helicase activity;0.0233200609820653!GO:0007021;tubulin folding;0.0237688144758538!GO:0050681;androgen receptor binding;0.0238239257661235!GO:0044437;vacuolar part;0.0241676316215181!GO:0031970;organelle envelope lumen;0.02514906213226!GO:0008147;structural constituent of bone;0.025628267362623!GO:0030518;steroid hormone receptor signaling pathway;0.0256644199189213!GO:0032906;transforming growth factor-beta2 production;0.0259600480185339!GO:0032909;regulation of transforming growth factor-beta2 production;0.0259600480185339!GO:0000792;heterochromatin;0.0259914580019818!GO:0007093;mitotic cell cycle checkpoint;0.0261554759064138!GO:0007052;mitotic spindle organization and biogenesis;0.0264435788720062!GO:0009303;rRNA transcription;0.0265491161725582!GO:0004177;aminopeptidase activity;0.0266815731577283!GO:0006672;ceramide metabolic process;0.0269347744784832!GO:0005765;lysosomal membrane;0.0269347744784832!GO:0007088;regulation of mitosis;0.0272064426299815!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0273664207216169!GO:0003756;protein disulfide isomerase activity;0.0273664207216169!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0273664207216169!GO:0005581;collagen;0.0275925142596966!GO:0046519;sphingoid metabolic process;0.0278344935397599!GO:0051348;negative regulation of transferase activity;0.028136485331041!GO:0016407;acetyltransferase activity;0.0281617770271456!GO:0050662;coenzyme binding;0.0281617770271456!GO:0033673;negative regulation of kinase activity;0.0282601252055637!GO:0006469;negative regulation of protein kinase activity;0.0282601252055637!GO:0051539;4 iron, 4 sulfur cluster binding;0.0282601252055637!GO:0045892;negative regulation of transcription, DNA-dependent;0.0285173359801376!GO:0045792;negative regulation of cell size;0.0285297898163976!GO:0035267;NuA4 histone acetyltransferase complex;0.0293045016586192!GO:0030131;clathrin adaptor complex;0.029485344560482!GO:0003690;double-stranded DNA binding;0.0301249325850338!GO:0006733;oxidoreduction coenzyme metabolic process;0.0307600276692484!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0309545343857402!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0311526883226544!GO:0019222;regulation of metabolic process;0.0311711739996203!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0313040160967044!GO:0006338;chromatin remodeling;0.0317136721109549!GO:0030308;negative regulation of cell growth;0.031798467151814!GO:0050811;GABA receptor binding;0.0323535033778136!GO:0008180;signalosome;0.0323535033778136!GO:0006739;NADP metabolic process;0.0324519158250223!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.032782076140908!GO:0051540;metal cluster binding;0.0331761982789654!GO:0051536;iron-sulfur cluster binding;0.0331761982789654!GO:0030508;thiol-disulfide exchange intermediate activity;0.0334719227139927!GO:0030433;ER-associated protein catabolic process;0.0335436533095898!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0335436533095898!GO:0050178;phenylpyruvate tautomerase activity;0.0335436533095898!GO:0009308;amine metabolic process;0.0340286112682018!GO:0031418;L-ascorbic acid binding;0.0340833838734448!GO:0035035;histone acetyltransferase binding;0.034221796465847!GO:0005811;lipid particle;0.0342252825542332!GO:0006144;purine base metabolic process;0.0343501027688151!GO:0008632;apoptotic program;0.0344081541632996!GO:0008538;proteasome activator activity;0.0344310623427377!GO:0004860;protein kinase inhibitor activity;0.0344326874608762!GO:0016408;C-acyltransferase activity;0.0346005229745965!GO:0005100;Rho GTPase activator activity;0.0346005229745965!GO:0006066;alcohol metabolic process;0.0351478710998319!GO:0006220;pyrimidine nucleotide metabolic process;0.035176287194804!GO:0006352;transcription initiation;0.035176287194804!GO:0006289;nucleotide-excision repair;0.035176287194804!GO:0006007;glucose catabolic process;0.0356498717000902!GO:0043022;ribosome binding;0.0357665223301587!GO:0006518;peptide metabolic process;0.0358849946212714!GO:0022415;viral reproductive process;0.0365919941578795!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0366193189585588!GO:0040029;regulation of gene expression, epigenetic;0.0372693491414387!GO:0045334;clathrin-coated endocytic vesicle;0.0372693491414387!GO:0043189;H4/H2A histone acetyltransferase complex;0.0379958975212631!GO:0000097;sulfur amino acid biosynthetic process;0.0386524747901665!GO:0030496;midbody;0.038880053327128!GO:0000910;cytokinesis;0.0392836357444644!GO:0046822;regulation of nucleocytoplasmic transport;0.0392836357444644!GO:0009081;branched chain family amino acid metabolic process;0.0392836357444644!GO:0046128;purine ribonucleoside metabolic process;0.0392836357444644!GO:0042278;purine nucleoside metabolic process;0.0392836357444644!GO:0006643;membrane lipid metabolic process;0.0394146671400629!GO:0009066;aspartate family amino acid metabolic process;0.0396458836999206!GO:0006118;electron transport;0.040122640105177!GO:0007017;microtubule-based process;0.040122640105177!GO:0012506;vesicle membrane;0.0403132235480971!GO:0016584;nucleosome positioning;0.0415338250875554!GO:0000123;histone acetyltransferase complex;0.0417111386691937!GO:0030503;regulation of cell redox homeostasis;0.0417111386691937!GO:0033559;unsaturated fatty acid metabolic process;0.0417111386691937!GO:0006636;unsaturated fatty acid biosynthetic process;0.0417111386691937!GO:0042157;lipoprotein metabolic process;0.0417111386691937!GO:0019206;nucleoside kinase activity;0.0419779019049937!GO:0051052;regulation of DNA metabolic process;0.0423202680238724!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0423651769115483!GO:0006378;mRNA polyadenylation;0.0424818915020609!GO:0004185;serine carboxypeptidase activity;0.0427148481840051!GO:0030911;TPR domain binding;0.0427621154853482!GO:0006892;post-Golgi vesicle-mediated transport;0.0434704867457507!GO:0005586;collagen type III;0.0438235506724763!GO:0005784;translocon complex;0.0440660620591492!GO:0006807;nitrogen compound metabolic process;0.044590884576133!GO:0006541;glutamine metabolic process;0.0449758366765616!GO:0006769;nicotinamide metabolic process;0.0470515516922622!GO:0031371;ubiquitin conjugating enzyme complex;0.0470515516922622!GO:0009112;nucleobase metabolic process;0.0473853275273331!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0473853275273331!GO:0033043;regulation of organelle organization and biogenesis;0.0473853275273331!GO:0030128;clathrin coat of endocytic vesicle;0.047481290967202!GO:0030669;clathrin-coated endocytic vesicle membrane;0.047481290967202!GO:0030122;AP-2 adaptor complex;0.047481290967202!GO:0006405;RNA export from nucleus;0.0476325673158739!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0479318995780025!GO:0004448;isocitrate dehydrogenase activity;0.0480114167522881!GO:0005876;spindle microtubule;0.0480279294038708!GO:0009124;nucleoside monophosphate biosynthetic process;0.0483405148635338!GO:0009123;nucleoside monophosphate metabolic process;0.0483405148635338!GO:0031123;RNA 3'-end processing;0.0483405148635338!GO:0006302;double-strand break repair;0.0488139919692561!GO:0030522;intracellular receptor-mediated signaling pathway;0.0497241058205235 | |||
|sample_id=11573 | |||
|sample_note= | |||
|sample_sex= | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=meninges | |||
|top_motifs=EBF1:1.45338721434;HOX{A5,B5}:1.36479817329;PAX1,9:1.34619278915;ESRRA:1.26674063126;TAL1_TCF{3,4,12}:1.2076944086;IKZF1:1.08325175267;TFAP4:1.05228153907;NR3C1:0.981081623688;ZIC1..3:0.931241174147;TFCP2:0.877687791549;GZF1:0.857749821074;GFI1:0.810970515509;LEF1_TCF7_TCF7L1,2:0.787790876104;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.785545039583;TLX1..3_NFIC{dimer}:0.782414018992;TEAD1:0.699857279592;EN1,2:0.682611578401;ZNF238:0.674042886045;NR5A1,2:0.581517481822;TFDP1:0.578398321319;SPZ1:0.574423391432;HNF4A_NR2F1,2:0.566636327029;NFY{A,B,C}:0.545695606818;SOX5:0.538868138434;XCPE1{core}:0.499071166225;PRRX1,2:0.479584375333;MAZ:0.450585544335;TFAP2{A,C}:0.446966562715;ONECUT1,2:0.446828786053;KLF4:0.445852869683;RXR{A,B,G}:0.441859618642;HIC1:0.438441777786;GTF2A1,2:0.435482884251;ZNF423:0.409175189963;bHLH_family:0.407436517947;AIRE:0.404437525506;SOX17:0.395564428217;HSF1,2:0.394618713503;TFAP2B:0.390818893915;MZF1:0.39070507753;ZNF148:0.387382284528;LHX3,4:0.380635607504;SRF:0.380493963766;GTF2I:0.379708593573;NHLH1,2:0.37626013128;PATZ1:0.360666139875;POU1F1:0.329828291645;STAT5{A,B}:0.328072968961;GFI1B:0.323598909202;CRX:0.288718762484;MYB:0.265812486799;XBP1:0.243021970375;RXRA_VDR{dimer}:0.240117992892;TOPORS:0.232046728745;NFIX:0.217345114778;AR:0.215320981609;ATF6:0.212272399917;E2F1..5:0.198735364793;HAND1,2:0.188992386581;PAX8:0.184542856695;SP1:0.182816653877;TBP:0.179252146521;ZNF143:0.16889026319;PBX1:0.158438337813;NFE2L2:0.15779227243;MTE{core}:0.156978024839;ZBTB6:0.153028434957;NANOG{mouse}:0.152246499882;CUX2:0.144072903218;MEF2{A,B,C,D}:0.142004815541;FOXM1:0.139158352759;MED-1{core}:0.127847370986;MYBL2:0.125651441863;T:0.12381430323;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.120419309422;TP53:0.113355634808;NRF1:0.105115759097;MTF1:0.104719714442;NFATC1..3:0.0997484748645;NR6A1:0.0985143541887;YY1:0.0967368643784;HES1:0.0895108594644;GATA6:0.0891110595671;FOXP3:0.0834549049893;MAFB:0.0790913818946;NANOG:0.0640164288516;FOSL2:0.0550634188287;SOX{8,9,10}:0.0544476080652;HLF:0.0534445932984;FOXA2:0.0438380571955;UFEwm:0.0353086778919;PAX5:0.0321579026276;PAX3,7:0.00505470283752;PAX4:-0.0294738279549;FOXQ1:-0.032089521814;HNF1A:-0.0502307119135;ALX4:-0.0646685416289;RORA:-0.0654088711963;SOX2:-0.0665276921279;AHR_ARNT_ARNT2:-0.0765241447905;GCM1,2:-0.0836487247232;RFX1:-0.0839556957374;NFE2L1:-0.0890477816502;ZNF384:-0.0943406328378;NR1H4:-0.0964714696822;VSX1,2:-0.101913652657;RREB1:-0.104128738107;TBX4,5:-0.105956604053;ESR1:-0.10733143349;RBPJ:-0.107731637976;NKX6-1,2:-0.107927981447;FOXO1,3,4:-0.110945820157;CEBPA,B_DDIT3:-0.111691154068;OCT4_SOX2{dimer}:-0.115398421208;PAX6:-0.116158918783;PRDM1:-0.120734133926;GLI1..3:-0.120763730103;ETS1,2:-0.130275482502;ZFP161:-0.131991246144;FOS_FOS{B,L1}_JUN{B,D}:-0.135794757485;BACH2:-0.138839021007;NFIL3:-0.154901546918;REST:-0.156197660445;NKX3-1:-0.164277919409;EGR1..3:-0.168938336532;PPARG:-0.20134575444;CDC5L:-0.202438514945;ELF1,2,4:-0.211795717787;RUNX1..3:-0.212239884768;HOX{A4,D4}:-0.215918916645;STAT1,3:-0.220944953113;BREu{core}:-0.229230483149;STAT2,4,6:-0.2483557509;HBP1_HMGB_SSRP1_UBTF:-0.250104372078;HOX{A6,A7,B6,B7}:-0.265638834256;NKX2-2,8:-0.269759989375;JUN:-0.280431844689;NKX2-1,4:-0.281990484275;FOXD3:-0.287272737376;MYFfamily:-0.289225517051;NFE2:-0.28963884911;ELK1,4_GABP{A,B1}:-0.314926254244;PAX2:-0.329112461944;HOXA9_MEIS1:-0.331358949405;FOX{I1,J2}:-0.332229395388;ADNP_IRX_SIX_ZHX:-0.334464264336;NFKB1_REL_RELA:-0.338020459469;GATA4:-0.339509860995;TEF:-0.339520069645;NKX2-3_NKX2-5:-0.361643327572;SPIB:-0.378828306049;POU3F1..4:-0.390772855065;TGIF1:-0.4007063836;SMAD1..7,9:-0.432984484524;HMGA1,2:-0.436003254103;POU5F1:-0.455768639031;ATF2:-0.497697146804;HIF1A:-0.499272461612;POU2F1..3:-0.501848048414;HMX1:-0.510557053206;BPTF:-0.515606500898;SNAI1..3:-0.536620632995;IRF7:-0.539059121229;LMO2:-0.540836874082;MYOD1:-0.542246162218;IRF1,2:-0.557207481387;EVI1:-0.589284389382;SPI1:-0.59967346907;TLX2:-0.638726391439;ARID5B:-0.639139941715;POU6F1:-0.670197638893;FOX{F1,F2,J1}:-0.675345835898;NKX3-2:-0.677823315902;SREBF1,2:-0.692540851912;PDX1:-0.735495915107;EP300:-0.73614378915;ZEB1:-0.749942574152;DMAP1_NCOR{1,2}_SMARC:-0.764075751557;CREB1:-0.764534734018;FOXL1:-0.76665571058;FOX{D1,D2}:-0.784098362257;ZBTB16:-0.799171447748;PITX1..3:-0.829734423668;FOXP1:-0.891522657679;ATF4:-0.924353867887;RFX2..5_RFXANK_RFXAP:-0.926197207212;ATF5_CREB3:-0.931539854957;ALX1:-0.947267518126;CDX1,2,4:-0.995376421472;DBP:-1.0193969337;FOXN1:-1.1833959934;IKZF2:-1.25965743887 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11573-120E7;search_select_hide=table117:FF:11573-120E7 | |||
}} | }} |
Latest revision as of 18:10, 4 June 2020
Name: | Meningeal Cells, donor2 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12080 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12080
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12080
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.221 |
10 | 10 | 0.00318 |
100 | 100 | 0.335 |
101 | 101 | 0.204 |
102 | 102 | 0.0298 |
103 | 103 | 0.342 |
104 | 104 | 0.574 |
105 | 105 | 0.126 |
106 | 106 | 0.996 |
107 | 107 | 0.457 |
108 | 108 | 0.825 |
109 | 109 | 0.966 |
11 | 11 | 0.943 |
110 | 110 | 0.272 |
111 | 111 | 0.297 |
112 | 112 | 0.498 |
113 | 113 | 0.101 |
114 | 114 | 0.633 |
115 | 115 | 0.501 |
116 | 116 | 0.305 |
117 | 117 | 0.174 |
118 | 118 | 0.0433 |
119 | 119 | 0.226 |
12 | 12 | 0.404 |
120 | 120 | 0.457 |
121 | 121 | 0.925 |
122 | 122 | 0.446 |
123 | 123 | 0.00283 |
124 | 124 | 0.397 |
125 | 125 | 0.545 |
126 | 126 | 0.824 |
127 | 127 | 0.603 |
128 | 128 | 0.354 |
129 | 129 | 0.611 |
13 | 13 | 0.272 |
130 | 130 | 0.134 |
131 | 131 | 0.886 |
132 | 132 | 0.679 |
133 | 133 | 0.899 |
134 | 134 | 0.023 |
135 | 135 | 0.48 |
136 | 136 | 0.735 |
137 | 137 | 0.00376 |
138 | 138 | 0.094 |
139 | 139 | 0.181 |
14 | 14 | 0.322 |
140 | 140 | 0.547 |
141 | 141 | 0.55 |
142 | 142 | 0.979 |
143 | 143 | 0.322 |
144 | 144 | 0.568 |
145 | 145 | 0.698 |
146 | 146 | 0.0719 |
147 | 147 | 0.311 |
148 | 148 | 0.165 |
149 | 149 | 0.451 |
15 | 15 | 0.52 |
150 | 150 | 0.0594 |
151 | 151 | 0.328 |
152 | 152 | 0.833 |
153 | 153 | 0.312 |
154 | 154 | 0.00469 |
155 | 155 | 0.0121 |
156 | 156 | 0.828 |
157 | 157 | 0.69 |
158 | 158 | 0.0975 |
159 | 159 | 0.877 |
16 | 16 | 0.476 |
160 | 160 | 0.456 |
161 | 161 | 0.392 |
162 | 162 | 0.178 |
163 | 163 | 0.752 |
164 | 164 | 0.138 |
165 | 165 | 0.121 |
166 | 166 | 0.78 |
167 | 167 | 0.0619 |
168 | 168 | 0.586 |
169 | 169 | 0.218 |
17 | 17 | 0.536 |
18 | 18 | 0.126 |
19 | 19 | 0.248 |
2 | 2 | 0.195 |
20 | 20 | 0.246 |
21 | 21 | 0.397 |
22 | 22 | 0.172 |
23 | 23 | 0.947 |
24 | 24 | 0.284 |
25 | 25 | 0.782 |
26 | 26 | 0.82 |
27 | 27 | 0.182 |
28 | 28 | 0.0976 |
29 | 29 | 0.397 |
3 | 3 | 0.5 |
30 | 30 | 0.0436 |
31 | 31 | 0.713 |
32 | 32 | 9.33444e-6 |
33 | 33 | 0.727 |
34 | 34 | 0.129 |
35 | 35 | 0.369 |
36 | 36 | 0.112 |
37 | 37 | 0.319 |
38 | 38 | 0.477 |
39 | 39 | 0.233 |
4 | 4 | 0.84 |
40 | 40 | 0.609 |
41 | 41 | 0.716 |
42 | 42 | 0.979 |
43 | 43 | 0.598 |
44 | 44 | 0.559 |
45 | 45 | 0.321 |
46 | 46 | 0.79 |
47 | 47 | 0.723 |
48 | 48 | 0.818 |
49 | 49 | 0.574 |
5 | 5 | 0.545 |
50 | 50 | 0.642 |
51 | 51 | 0.803 |
52 | 52 | 0.968 |
53 | 53 | 0.264 |
54 | 54 | 0.923 |
55 | 55 | 0.44 |
56 | 56 | 0.669 |
57 | 57 | 0.666 |
58 | 58 | 0.125 |
59 | 59 | 0.342 |
6 | 6 | 0.343 |
60 | 60 | 0.652 |
61 | 61 | 0.896 |
62 | 62 | 0.183 |
63 | 63 | 0.503 |
64 | 64 | 0.451 |
65 | 65 | 0.0876 |
66 | 66 | 0.0407 |
67 | 67 | 0.928 |
68 | 68 | 0.97 |
69 | 69 | 0.413 |
7 | 7 | 0.901 |
70 | 70 | 0.376 |
71 | 71 | 0.234 |
72 | 72 | 0.223 |
73 | 73 | 0.797 |
74 | 74 | 0.573 |
75 | 75 | 0.516 |
76 | 76 | 0.0962 |
77 | 77 | 0.306 |
78 | 78 | 0.228 |
79 | 79 | 0.0468 |
8 | 8 | 0.236 |
80 | 80 | 0.122 |
81 | 81 | 0.0974 |
82 | 82 | 0.203 |
83 | 83 | 0.942 |
84 | 84 | 0.0507 |
85 | 85 | 0.71 |
86 | 86 | 0.162 |
87 | 87 | 0.901 |
88 | 88 | 0.57 |
89 | 89 | 0.252 |
9 | 9 | 0.216 |
90 | 90 | 0.216 |
91 | 91 | 0.313 |
92 | 92 | 0.755 |
93 | 93 | 0.47 |
94 | 94 | 0.929 |
95 | 95 | 0.481 |
96 | 96 | 0.171 |
97 | 97 | 0.389 |
98 | 98 | 0.923 |
99 | 99 | 9.39591e-4 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12080
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000327 (extracellular matrix secreting cell)
0000255 (eukaryotic cell)
0000708 (leptomeningeal cell)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0000119 (cell layer)
0003210 (blood-cerebrospinal fluid barrier)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000091 (human leptomeningeal cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)