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{{f5samples
{{f5samples
|id=FF:11750-123G4
|DRA_sample_Accession=CAGE@SAMD00005856
|name=mesenchymal precursor cell - bone marrow, donor1
|accession_numbers=CAGE;DRX008548;DRR009420;DRZ000845;DRZ002230;DRZ012195;DRZ013580
|sample_id=11750
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002371,UBERON:0001474,UBERON:0002384,UBERON:0000479,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0010317,UBERON:0002204,UBERON:0001434,UBERON:0002390,UBERON:0002193,UBERON:0002405
|rna_tube_id=123G4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002092,CL:0002540
|rna_box=123
|rna_position=G4
|sample_cell_lot=BM-21
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=bone marrow
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.17
|rna_od260/280=2.04
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=54.738
|rna_concentration=0.72984
|sample_note=
|profile_hcage=CNhs12366,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002092,CL:0002320,CL:0002371,CL:0002540
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000269
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.66!50.95!PRRX1;;chr6:45296048..45296082,+!p1@RUNX2!1.64!48.49!RUNX2;;chr6:1312325..1312340,+!p1@FOXQ1!1.62!64.59!FOXQ1;;chr19:45971246..45971265,+!p1@FOSB!1.54!600.98!FOSB;;chr12:52445218..52445237,+!p1@NR4A1!1.54!408.54!NR4A1;;chr2:157189180..157189290,-!p1@NR4A2!1.52!161.56!NR4A2;;chr1:170633348..170633399,+!p2@PRRX1!1.51!41.86!PRRX1;;chr19:54041669..54041697,+!p2@ZNF331!1.46!27.84!ZNF331;;chr19:13134772..13134822,+!p2@NFIX!1.44!39.02!NFIX;;chr19:54058073..54058088,+!p1@ZNF331!1.42!25.57!ZNF331;;chr15:42749722..42749739,-!p2@ZFP106!1.40!42.99!ZFP106;;chr7:14029283..14029311,-!p1@ETV1!1.38!118.57!ETV1;;chr7:19157248..19157268,-!p1@TWIST1!1.37!61.18!TWIST1;;chr4:26322267..26322334,+!p3@RBPJ!1.35!50.76!RBPJ;;chr4:26323870..26323885,+!p13@RBPJ!1.31!19.51!RBPJ;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.30!18.94!HOXC5;;chr7:14028488..14028516,-!p2@ETV1!1.29!20.46!ETV1;;chr3:5021268..5021282,+!p4@BHLHE40!1.28!36.55!BHLHE40;;chr4:174451370..174451387,-!p1@HAND2!1.28!18.18!HAND2;;chr6:1610293..1610310,+!p1@FOXC1!1.27!28.98!FOXC1;;chr1:170633262..170633285,+!p3@PRRX1!1.26!19.51!PRRX1;;chr8:22550982..22550999,-!p1@EGR3!1.25!46.40!EGR3;;chr16:54320617..54320643,-!p3@IRX3!1.25!21.59!IRX3;;chr9:102584159..102584174,+!p2@NR4A3!1.24!29.36!NR4A3;;chr3:21792585..21792625,-!p2@ZNF385D!1.22!17.43!ZNF385D;;chr8:116673894..116673913,-!p12@TRPS1!1.20!14.96!TRPS1;;chr4:174450089..174450153,-!p2@HAND2!1.18!14.21!HAND2;;chr3:21792682..21792720,-!p1@ZNF385D!1.17!13.64!ZNF385D;;chr2:45236540..45236577,-!p1@SIX2!1.15!13.07!SIX2;;chr12:54378923..54378966,+!p1@HOXC10!1.14!12.88!HOXC10;;chr14:24837368..24837401,+!p1@NFATC4!1.13!29.17!NFATC4;;chr16:54320646..54320672,-!p2@IRX3!1.13!19.13!IRX3;;chr3:157823517..157823562,-!p1@SHOX2!1.13!13.45!SHOX2;;chr21:36260773..36260804,-!p7@RUNX1!1.12!16.48!RUNX1;;chr14:75745523..75745537,+!p1@FOS!1.10!1389.27!FOS;;chr7:96654133..96654150,-!p1@DLX5!1.10!11.55!DLX5;;chr7:19157043..19157088,-!p2@TWIST1!1.08!27.84!TWIST1;;chr12:54380404..54380433,+!p3@HOXC10!1.07!10.80!HOXC10;;chr4:26323764..26323821,+!p15@RBPJ!1.06!10.42!RBPJ;;chr8:49833948..49833973,-!p2@SNAI2!1.03!62.12!SNAI2;;chr2:102091566..102091581,-!p1@RFX8!1.02!9.47!RFX8;;chr9:102584262..102584276,+!p1@NR4A3!1.01!21.02!NR4A3;;chr20:50179368..50179392,-!p2@NFATC2!1.01!11.93!NFATC2;;chr7:44143925..44143970,+!p1@AEBP1!1.00!204.56!AEBP1;;chr7:15726296..15726315,-!p1@MEOX2!1.00!8.90!MEOX2;;chr12:54380036..54380091,+!p4@HOXC10!1.00!8.90!HOXC10;;chr12:52437488..52437507,+!p2@NR4A1!0.99!8.71!NR4A1;;chr5:137804484..137804498,+!p2@EGR1!0.98!34.85!EGR1;;chr12:66218255..66218304,+!p3@HMGA2!0.98!23.49!HMGA2;;chr14:75746722..75746777,+!p2@FOS!0.98!10.99!FOS;;chr12:66218598..66218645,+!p2@HMGA2!0.96!39.02!HMGA2;;chr16:54320101..54320125,-!p4@IRX3!0.96!11.74!IRX3;;chr4:26324474..26324501,+!p16@RBPJ!0.96!8.14!RBPJ;;chr11:46299199..46299233,+!p1@CREB3L1!0.95!42.05!CREB3L1;;chr2:19558373..19558392,-!p1@OSR1!0.95!22.16!OSR1;;chr4:26322373..26322393,+!p4@RBPJ!0.95!11.93!RBPJ;;chr1:44513995..44514031,+!p1@KLF17!0.95!7.95!KLF17;;chr2:200322654..200322707,-!p2@SATB2!0.94!11.36!SATB2;;chr8:25902876..25902936,-!p1@EBF2!0.94!7.77!EBF2;;chr16:54320675..54320715,-!p1@IRX3!0.93!16.48!IRX3;;chr7:44143978..44143989,+!p2@AEBP1!0.93!14.21!AEBP1;;chr4:26322673..26322684,+!p11@RBPJ!0.93!7.58!RBPJ;;chrY:21906594..21906622,-!p1@KDM5D!0.93!7.58!KDM5D;;chr8:49833978..49833996,-!p1@SNAI2!0.91!153.23!SNAI2;;chr11:65686802..65686818,+!p6@DRAP1!0.90!12.31!DRAP1;;chr16:54320322..54320343,-!p7@IRX3!0.90!7.01!IRX3;;chr11:65686732..65686756,+!p2@DRAP1!0.89!30.12!DRAP1;;chr21:36260295..36260310,-!p3@RUNX1!0.89!11.17!RUNX1;;chr7:15726243..15726293,-!p2@MEOX2!0.89!6.82!MEOX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.89!6.82!HOXC5;;chr7:96654026..96654061,-!p2@DLX5!0.87!6.44!DLX5;;chr11:65687362..65687436,+!p3@DRAP1!0.86!30.12!DRAP1;;chr7:15725757..15725828,-!p5@MEOX2!0.86!6.25!MEOX2;;chr5:158526917..158526932,-!p1@EBF1!0.85!15.72!EBF1;;chr7:27196267..27196311,-!p1@HOXA7!0.85!6.06!HOXA7;;chr1:170632250..170632277,+!p7@PRRX1!0.85!6.06!PRRX1;;chr3:21792631..21792665,-!p3@ZNF385D!0.85!6.06!ZNF385D;;chr10:35484053..35484076,+!p1@CREM!0.84!15.34!CREM;;chr3:21792790..21792824,-!p4@ZNF385D!0.84!5.87!ZNF385D;;chr1:170632959..170632987,+!p4@PRRX1!0.83!6.44!PRRX1;;chr17:59477233..59477263,+!p1@TBX2!0.82!18.56!TBX2;;chr7:27205106..27205134,-!p2@HOXA9!0.82!5.68!HOXA9;;chr3:141087454..141087465,+!p19@ZBTB38!0.82!5.68!ZBTB38;;chr12:53614115..53614154,-!p1@RARG!0.81!31.06!RARG;;chr10:131762504..131762555,-!p1@EBF3!0.81!5.49!EBF3;;chr3:193853927..193853944,+!p1@HES1!0.80!189.21!HES1;;chr1:158979872..158979898,+!p3@IFI16!0.80!17.61!IFI16;;chr2:46612334..46612349,+!p6@EPAS1!0.80!7.20!EPAS1;;chrY:2803415..2803468,+!p1@ZFY!0.80!5.30!ZFY;;chr7:27213893..27213954,-!p1@HOXA10!0.80!5.30!HOXA10;;chr5:137801160..137801176,+!p1@EGR1!0.79!563.47!EGR1;;chr9:16870710..16870763,-!p1@BNC2!0.79!9.28!BNC2;;chr1:170632723..170632739,+!p8@PRRX1!0.79!5.11!PRRX1;;chr4:26322419..26322479,+!p2@RBPJ!0.77!64.59!RBPJ;;chr14:62162258..62162269,+!p2@HIF1A!0.77!51.90!HIF1A;;chr6:19837592..19837621,+!p1@ID4!0.77!32.77!ID4;;chr11:65687158..65687216,+!p4@DRAP1!0.77!30.87!DRAP1;;chr17:38256799..38256815,-!p3@NR1D1!0.77!9.28!NR1D1;;chr7:14029312..14029325,-!p4@ETV1!0.77!6.25!ETV1;;chr15:67458491..67458505,+!p18@SMAD3!0.77!4.92!SMAD3;;chr19:13135386..13135435,+!p4@NFIX!0.77!4.92!NFIX;;chr5:133450365..133450444,+!p1@TCF7!0.76!23.86!TCF7;;chr7:113726357..113726443,+!p1@FOXP2!0.76!8.52!FOXP2;;chr7:44143997..44144008,+!p3@AEBP1!0.76!6.25!AEBP1;;chr1:170632477..170632506,+!p6@PRRX1!0.76!4.74!PRRX1;;chr20:39317868..39317884,-!p1@MAFB!0.75!60.42!MAFB;;chr7:28448965..28448994,+!p2@CREB5!0.73!17.05!CREB5;;chr14:62162285..62162296,+!p3@HIF1A!0.72!24.43!HIF1A;;chr11:65687222..65687240,+!p7@DRAP1!0.72!5.68!DRAP1;;chr10:63809106..63809127,+!p1@ARID5B!0.71!63.83!ARID5B;;chr1:59249688..59249703,-!p3@JUN!0.71!28.03!JUN;;chr18:22932080..22932170,-!p1@ZNF521!0.71!19.32!ZNF521;;chr19:13134457..13134462,+!p5@NFIX!0.71!7.95!NFIX;;chr11:46299539..46299620,+!p2@CREB3L1!0.71!7.39!CREB3L1;;chr12:54394309..54394336,+!p2@HOXC9!0.71!4.17!HOXC9;;chr7:27205136..27205164,-!p1@HOXA9!0.71!4.17!HOXA9;;chr8:93074803..93074845,-!p1@RUNX1T1!0.71!4.17!RUNX1T1;;chr4:174451350..174451363,-!p3@HAND2!0.71!4.17!HAND2;;chr14:61116183..61116208,-!p1@SIX1!0.70!17.05!SIX1;;chr10:64576105..64576133,-!p1@EGR2!0.70!8.90!EGR2;;chr21:36260343..36260402,-!p6@RUNX1!0.70!6.82!RUNX1;;chr12:26277817..26277863,-!p2@BHLHE41!0.70!5.68!BHLHE41;;chr2:102091144..102091183,-!p2@RFX8!0.70!3.98!RFX8;;chr3:21792774..21792789,-!p8@ZNF385D!0.70!3.98!ZNF385D;;chr1:170632647..170632659,+!p17@PRRX1!0.70!3.98!PRRX1;;chr19:12902289..12902307,+!p1@JUNB!0.69!1034.33!JUNB;;chr6:85474299..85474324,-!p1@TBX18!0.69!7.58!TBX18;;chr1:170632310..170632321,+!p15@PRRX1!0.68!3.79!PRRX1;;chr1:2985726..2985752,+!p2@PRDM16!0.68!3.79!PRDM16;;chr10:35484090..35484104,+!p6@CREM!0.68!3.79!CREM;;chr12:66218923..66218934,+!p14@HMGA2!0.68!3.79!HMGA2;;chr16:31076332..31076388,-!p3@ZNF668!0.68!3.79!ZNF668;;chr7:42276787..42276815,-!p1@GLI3!0.67!10.99!GLI3;;chr2:200323414..200323455,-!p1@SATB2!0.67!8.52!SATB2;;chr8:72756267..72756296,-!p4@MSC!0.67!5.68!MSC;;chr17:59477275..59477286,+!p3@TBX2!0.67!5.11!TBX2;;chr6:126240442..126240459,+!p4@NCOA7!0.67!4.92!NCOA7;;chr5:137804130..137804156,+!p5@EGR1!0.67!3.98!EGR1;;chr1:212782094..212782109,+!p1@ATF3!0.66!114.40!ATF3;;chr12:96588143..96588185,+!p1@ELK3!0.66!50.95!ELK3;;chr3:114343768..114343822,-!p1@ZBTB20!0.66!17.99!ZBTB20;;chr3:5021191..5021202,+!p3@BHLHE40!0.66!10.61!BHLHE40;;chr5:134369905..134369972,-!p1@PITX1!0.66!5.87!PITX1;;chr6:1612248..1612281,+!p2@FOXC1!0.66!3.98!FOXC1;;chr9:16705069..16705086,-!p3@BNC2!0.66!3.60!BNC2;;chr1:158979792..158979814,+!p2@IFI16!0.65!38.26!IFI16;;chr16:79634624..79634642,-!p1@MAF!0.65!15.72!MAF;;chr16:54964740..54964789,+!p1@IRX5!0.65!5.30!IRX5;;chr9:16870659..16870675,-!p2@BNC2!0.65!4.36!BNC2;;chr9:110252035..110252057,-!p1@KLF4!0.64!63.64!KLF4;;chr3:141087393..141087426,+!p3@ZBTB38!0.64!15.53!ZBTB38;;chr8:116681409..116681431,-!p2@TRPS1!0.64!10.42!TRPS1;;chr19:13136130..13136165,+!p6@NFIX!0.64!4.74!NFIX;;chr1:203055129..203055147,-!p1@MYOG!0.64!3.41!MYOG;;chr7:14025855..14025890,-!p6@ETV1!0.64!3.41!ETV1;;chr7:28449015..28449024,+!p6@CREB5!0.64!3.41!CREB5;;chr9:102584278..102584285,+!p5@NR4A3!0.64!3.41!NR4A3;;chr12:66218904..66218913,+!p11@HMGA2!0.64!3.41!HMGA2;;chr9:94186085..94186096,-!p3@NFIL3!0.63!5.87!NFIL3;;chr16:54320280..54320291,-!p9@IRX3!0.63!3.22!IRX3;;chr16:86600870..86600921,+!p2@FOXC2!0.63!3.22!FOXC2;;chr3:157824001..157824078,-!p2@SHOX2!0.63!3.22!SHOX2;;chr1:170632762..170632786,+!p13@PRRX1!0.63!3.22!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.63!3.22!PRRX1;;chr4:26322616..26322652,+!p1@RBPJ!0.62!82.39!RBPJ;;chr2:145275162..145275202,-!p2@ZEB2!0.62!21.78!ZEB2;;chr5:72744594..72744609,-!p1@FOXD1!0.62!17.05!FOXD1;;chr12:66218183..66218209,+!p4@HMGA2!0.62!6.82!HMGA2;;chr4:81118647..81118666,+!p1@PRDM8!0.61!4.36!PRDM8;;chr8:93074848..93074871,-!p3@RUNX1T1!0.61!3.03!RUNX1T1;;chr16:54319010..54319041,-!p8@IRX3!0.61!3.03!IRX3;;chr16:54320302..54320317,-!p10@IRX3!0.61!3.03!IRX3;;chr21:36260325..36260341,-!p14@RUNX1!0.61!3.03!RUNX1;;chr11:65667846..65667868,-!p1@FOSL1!0.59!93.57!FOSL1;;chr5:88178983..88179012,-!p1@MEF2C!0.59!27.08!MEF2C;;chr12:26277956..26277980,-!p1@BHLHE41!0.59!12.12!BHLHE41;;chr13:74708029..74708077,-!p2@KLF12!0.59!9.66!KLF12;;chr1:200379104..200379128,-!p2@ZNF281!0.59!8.14!ZNF281;;chr7:28448995..28449011,+!p4@CREB5!0.59!4.36!CREB5;;chr12:72056800..72056834,+!p1@THAP2!0.59!4.17!THAP2;;chr7:44143738..44143760,+!p4@AEBP1!0.59!3.41!AEBP1;;chr9:4300050..4300118,-!p1@GLIS3!0.58!22.16!GLIS3;;chr2:208394817..208394834,+!p3@CREB1!0.58!13.45!CREB1;;chr18:3451646..3451691,+!p3@TGIF1!0.58!8.71!TGIF1;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.58!7.01!SOHLH2;;chr1:158969752..158969780,+!p6@IFI16!0.58!5.49!IFI16;;chr1:170632137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|ffid_belonging_in_development=CL:0000134
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|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
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|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor1.CNhs12366.11750-123G4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor1.CNhs12366.11750-123G4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor1.CNhs12366.11750-123G4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor1.CNhs12366.11750-123G4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor1.CNhs12366.11750-123G4.hg38.nobarcode.ctss.bed.gz
|id=FF:11750-123G4
|is_a=EFO:0002091;;FF:0000269
|is_obsolete=
|library_id=CNhs12366
|library_id_phase_based=2:CNhs12366
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11750
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11750
|name=mesenchymal precursor cell - bone marrow, donor1
|namespace=FANTOM5
|namespace=FANTOM5
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|profile_hcage=CNhs12366,LSID914,release011,COMPLETED
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|rna_box=123
|rna_catalog_number=
|rna_concentration=0.72984
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.17
|rna_od260/280=2.04
|rna_position=G4
|rna_rin=
|rna_sample_type=
|rna_tube_id=123G4
|rna_weight_ug=54.738
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=BM-21
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.69755577466305e-215!GO:0005737;cytoplasm;1.11865263803931e-193!GO:0043226;organelle;1.51091200712311e-165!GO:0043229;intracellular organelle;2.57018156057016e-165!GO:0043231;intracellular membrane-bound organelle;1.54915138032315e-162!GO:0043227;membrane-bound organelle;3.43644462475647e-162!GO:0044444;cytoplasmic part;5.25444459157356e-150!GO:0044422;organelle part;1.71507643773852e-121!GO:0044446;intracellular organelle part;4.40268006927608e-120!GO:0032991;macromolecular complex;4.29579981090428e-85!GO:0005515;protein binding;8.26203697187066e-77!GO:0030529;ribonucleoprotein complex;1.04994569648668e-75!GO:0044238;primary metabolic process;9.13602344431354e-73!GO:0044237;cellular metabolic process;3.32908347505974e-72!GO:0043170;macromolecule metabolic process;9.45744765964868e-66!GO:0005739;mitochondrion;7.34734509139188e-64!GO:0043233;organelle lumen;1.07423592947695e-61!GO:0031974;membrane-enclosed lumen;1.07423592947695e-61!GO:0003723;RNA binding;3.4584871364679e-57!GO:0044428;nuclear part;7.32314995922034e-55!GO:0031090;organelle membrane;1.02278433836798e-52!GO:0005634;nucleus;2.54837727302857e-49!GO:0005840;ribosome;3.14059833878812e-48!GO:0015031;protein transport;1.62352023812508e-46!GO:0019538;protein metabolic process;6.05871389163581e-46!GO:0033036;macromolecule localization;6.21692742950068e-46!GO:0006412;translation;7.07213824940615e-45!GO:0045184;establishment of protein localization;3.93797556403895e-44!GO:0008104;protein localization;1.20972485716771e-43!GO:0003735;structural constituent of ribosome;3.11403487349076e-43!GO:0043234;protein complex;6.05070516538744e-43!GO:0016043;cellular component organization and biogenesis;1.35192214440368e-42!GO:0044429;mitochondrial part;2.19238579267331e-42!GO:0005829;cytosol;1.28741890802893e-41!GO:0044260;cellular macromolecule metabolic process;1.16928715728984e-40!GO:0009058;biosynthetic process;8.28212076249633e-40!GO:0044267;cellular protein metabolic process;2.08983052493162e-39!GO:0006396;RNA processing;1.57766989586338e-38!GO:0033279;ribosomal subunit;2.13490363798099e-37!GO:0009059;macromolecule biosynthetic process;7.55932212597796e-37!GO:0031967;organelle envelope;4.31159878673097e-36!GO:0031975;envelope;1.03795635649284e-35!GO:0044249;cellular biosynthetic process;1.1601851871081e-34!GO:0031981;nuclear lumen;2.58783171159609e-34!GO:0046907;intracellular transport;1.46737898980708e-33!GO:0016071;mRNA metabolic process;1.06088630831449e-31!GO:0010467;gene expression;1.36761701401656e-31!GO:0043283;biopolymer metabolic process;2.30875016798662e-31!GO:0008380;RNA splicing;2.46796531824239e-31!GO:0006886;intracellular protein transport;2.4511792136158e-29!GO:0005740;mitochondrial envelope;1.08173703955471e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.24761458795627e-28!GO:0006397;mRNA processing;7.42422638260859e-28!GO:0031966;mitochondrial membrane;9.62476107889251e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.59739324684201e-26!GO:0065003;macromolecular complex assembly;2.13323271998567e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.00625897151298e-25!GO:0019866;organelle inner membrane;7.51469620007695e-25!GO:0005743;mitochondrial inner membrane;9.23281556420592e-24!GO:0005783;endoplasmic reticulum;1.825452831889e-23!GO:0006119;oxidative phosphorylation;8.58307794555839e-23!GO:0006996;organelle organization and biogenesis;8.58307794555839e-23!GO:0022607;cellular component assembly;1.22255968409528e-22!GO:0043228;non-membrane-bound organelle;1.70093428020654e-22!GO:0043232;intracellular non-membrane-bound organelle;1.70093428020654e-22!GO:0044445;cytosolic part;3.18597650840126e-22!GO:0051649;establishment of cellular localization;4.70115659133841e-22!GO:0051641;cellular localization;6.05188157504338e-22!GO:0005654;nucleoplasm;6.90590493967876e-21!GO:0005681;spliceosome;7.03658960625934e-21!GO:0012505;endomembrane system;7.76674886877348e-21!GO:0006457;protein folding;1.06248030731926e-20!GO:0015935;small ribosomal subunit;1.11522825991039e-19!GO:0048770;pigment granule;3.33870035520248e-19!GO:0042470;melanosome;3.33870035520248e-19!GO:0044455;mitochondrial membrane part;5.64225925069419e-19!GO:0044432;endoplasmic reticulum part;6.33232761592877e-19!GO:0015934;large ribosomal subunit;9.34193937378021e-19!GO:0016462;pyrophosphatase activity;1.56221184631785e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.56221184631785e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.19624551398249e-18!GO:0005794;Golgi apparatus;1.16598043898518e-17!GO:0017111;nucleoside-triphosphatase activity;1.20893994689669e-17!GO:0008134;transcription factor binding;1.26411503822857e-17!GO:0044451;nucleoplasm part;1.83663331404218e-17!GO:0005746;mitochondrial respiratory chain;4.71124191904184e-17!GO:0031980;mitochondrial lumen;4.94354021764862e-17!GO:0005759;mitochondrial matrix;4.94354021764862e-17!GO:0051186;cofactor metabolic process;6.28084966745135e-17!GO:0022618;protein-RNA complex assembly;8.86766232612588e-17!GO:0000166;nucleotide binding;1.06792998448433e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.63451824131873e-16!GO:0000502;proteasome complex (sensu Eukaryota);5.30542106046986e-16!GO:0016874;ligase activity;1.84794798531215e-15!GO:0016192;vesicle-mediated transport;3.92034673223215e-15!GO:0006512;ubiquitin cycle;5.20045934821547e-15!GO:0044265;cellular macromolecule catabolic process;7.99318587955423e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.63495858410815e-15!GO:0050136;NADH dehydrogenase (quinone) activity;9.75649040613552e-15!GO:0003954;NADH dehydrogenase activity;9.75649040613552e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.75649040613552e-15!GO:0048193;Golgi vesicle transport;1.0085916076468e-14!GO:0006605;protein targeting;1.06237561628066e-14!GO:0043285;biopolymer catabolic process;1.11721993401865e-14!GO:0006259;DNA metabolic process;2.16298407796332e-14!GO:0008135;translation factor activity, nucleic acid binding;2.34961775419153e-14!GO:0009057;macromolecule catabolic process;4.01293582062601e-14!GO:0005730;nucleolus;4.0763240706453e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;6.70024516763912e-14!GO:0044248;cellular catabolic process;7.21165757510927e-14!GO:0003676;nucleic acid binding;1.10829867427258e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.28856934797216e-13!GO:0019941;modification-dependent protein catabolic process;1.30951792498702e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.30951792498702e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.56964784082449e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.68133824016108e-13!GO:0044257;cellular protein catabolic process;1.80188422056573e-13!GO:0051082;unfolded protein binding;1.95041557458683e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.45170214458476e-13!GO:0030163;protein catabolic process;3.26949234241406e-13!GO:0005793;ER-Golgi intermediate compartment;3.90535906464799e-13!GO:0006732;coenzyme metabolic process;4.67536170255127e-13!GO:0005761;mitochondrial ribosome;5.15091889951804e-13!GO:0000313;organellar ribosome;5.15091889951804e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.33578819410697e-13!GO:0045271;respiratory chain complex I;5.33578819410697e-13!GO:0005747;mitochondrial respiratory chain complex I;5.33578819410697e-13!GO:0042775;organelle ATP synthesis coupled electron transport;5.59231565567641e-13!GO:0042773;ATP synthesis coupled electron transport;5.59231565567641e-13!GO:0005789;endoplasmic reticulum membrane;6.88012236000367e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.67054352808646e-12!GO:0016070;RNA metabolic process;4.41425667422414e-12!GO:0017076;purine nucleotide binding;6.70077962164463e-12!GO:0032553;ribonucleotide binding;1.9109640687491e-11!GO:0032555;purine ribonucleotide binding;1.9109640687491e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.37046330407775e-11!GO:0000375;RNA splicing, via transesterification reactions;2.37046330407775e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.37046330407775e-11!GO:0003743;translation initiation factor activity;2.58707038628269e-11!GO:0012501;programmed cell death;3.58983858387503e-11!GO:0005768;endosome;5.27149172569395e-11!GO:0043412;biopolymer modification;5.2750146867322e-11!GO:0006163;purine nucleotide metabolic process;5.2750146867322e-11!GO:0006915;apoptosis;6.31616896610531e-11!GO:0003712;transcription cofactor activity;6.95465233462826e-11!GO:0009055;electron carrier activity;8.42455668587981e-11!GO:0006413;translational initiation;8.55607917626276e-11!GO:0009259;ribonucleotide metabolic process;8.7081885657906e-11!GO:0009150;purine ribonucleotide metabolic process;8.93717930773149e-11!GO:0007049;cell cycle;1.03049288142017e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.03049288142017e-10!GO:0009141;nucleoside triphosphate metabolic process;3.68253578767915e-10!GO:0009199;ribonucleoside triphosphate metabolic process;4.15698722933414e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.35310987070434e-10!GO:0009144;purine nucleoside triphosphate metabolic process;5.35310987070434e-10!GO:0008219;cell death;5.5583416479702e-10!GO:0016265;death;5.5583416479702e-10!GO:0006164;purine nucleotide biosynthetic process;5.5583416479702e-10!GO:0009152;purine ribonucleotide biosynthetic process;9.4862097354476e-10!GO:0006464;protein modification process;9.5638375560928e-10!GO:0048523;negative regulation of cellular process;1.01972810929286e-09!GO:0045333;cellular respiration;1.12510083662097e-09!GO:0005773;vacuole;1.27089446866999e-09!GO:0042254;ribosome biogenesis and assembly;1.4481630893128e-09!GO:0016604;nuclear body;1.60832877282493e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.01635538395056e-09!GO:0016491;oxidoreductase activity;2.42294864363802e-09!GO:0009260;ribonucleotide biosynthetic process;2.45949524863484e-09!GO:0006446;regulation of translational initiation;3.28413896780418e-09!GO:0009060;aerobic respiration;3.31252909490373e-09!GO:0015986;ATP synthesis coupled proton transport;4.32918801659867e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.32918801659867e-09!GO:0046034;ATP metabolic process;5.47670439397171e-09!GO:0006974;response to DNA damage stimulus;6.08249948499e-09!GO:0003924;GTPase activity;6.2885892987817e-09!GO:0009142;nucleoside triphosphate biosynthetic process;7.12303696820273e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.12303696820273e-09!GO:0008639;small protein conjugating enzyme activity;8.52986735945169e-09!GO:0031965;nuclear membrane;9.03061446433609e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.08028508314469e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.08028508314469e-09!GO:0009056;catabolic process;9.72881498822333e-09!GO:0006461;protein complex assembly;9.72881498822333e-09!GO:0005635;nuclear envelope;1.08956185242879e-08!GO:0019787;small conjugating protein ligase activity;1.35689506681833e-08!GO:0030554;adenyl nucleotide binding;1.43507410318976e-08!GO:0004842;ubiquitin-protein ligase activity;1.57113738628335e-08!GO:0019829;cation-transporting ATPase activity;1.62268813372134e-08!GO:0005788;endoplasmic reticulum lumen;1.69221757615277e-08!GO:0005524;ATP binding;1.78583864493428e-08!GO:0006913;nucleocytoplasmic transport;1.98238418802196e-08!GO:0000323;lytic vacuole;1.99861285855857e-08!GO:0005764;lysosome;1.99861285855857e-08!GO:0044440;endosomal part;2.96615677466504e-08!GO:0010008;endosome membrane;2.96615677466504e-08!GO:0032559;adenyl ribonucleotide binding;3.00960268342e-08!GO:0008565;protein transporter activity;3.09398616910994e-08!GO:0006366;transcription from RNA polymerase II promoter;3.47746040186154e-08!GO:0017038;protein import;3.62163927748957e-08!GO:0006888;ER to Golgi vesicle-mediated transport;3.65875903435069e-08!GO:0042623;ATPase activity, coupled;3.6779763796551e-08!GO:0051169;nuclear transport;3.9140535394045e-08!GO:0048519;negative regulation of biological process;3.95128793928068e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.08439152547701e-08!GO:0016887;ATPase activity;4.21381899254677e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.82191414437558e-08!GO:0022402;cell cycle process;5.43481268267071e-08!GO:0030120;vesicle coat;6.15570940469559e-08!GO:0030662;coated vesicle membrane;6.15570940469559e-08!GO:0044431;Golgi apparatus part;6.58395101003327e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.76582579200587e-08!GO:0016881;acid-amino acid ligase activity;7.48067231817462e-08!GO:0005770;late endosome;7.99200608986886e-08!GO:0006099;tricarboxylic acid cycle;8.08636581618332e-08!GO:0046356;acetyl-CoA catabolic process;8.08636581618332e-08!GO:0006754;ATP biosynthetic process;8.08636581618332e-08!GO:0006753;nucleoside phosphate metabolic process;8.08636581618332e-08!GO:0043687;post-translational protein modification;8.47840474052693e-08!GO:0051188;cofactor biosynthetic process;9.58497584586917e-08!GO:0051246;regulation of protein metabolic process;1.10087748427259e-07!GO:0016607;nuclear speck;1.31959383994844e-07!GO:0051187;cofactor catabolic process;1.42359023398085e-07!GO:0044453;nuclear membrane part;1.58307292206218e-07!GO:0043069;negative regulation of programmed cell death;1.70458422268435e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.85525187143705e-07!GO:0048475;coated membrane;1.85525187143705e-07!GO:0030117;membrane coat;1.85525187143705e-07!GO:0042981;regulation of apoptosis;1.85525187143705e-07!GO:0043066;negative regulation of apoptosis;1.98684477462613e-07!GO:0006091;generation of precursor metabolites and energy;2.2186550089877e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.37144378041441e-07!GO:0043067;regulation of programmed cell death;2.42121132952206e-07!GO:0004386;helicase activity;2.59812040650825e-07!GO:0016023;cytoplasmic membrane-bound vesicle;3.05093190896671e-07!GO:0031988;membrane-bound vesicle;3.16046657300746e-07!GO:0006084;acetyl-CoA metabolic process;3.6178453524687e-07!GO:0008026;ATP-dependent helicase activity;3.79501447358649e-07!GO:0006399;tRNA metabolic process;3.81887962931247e-07!GO:0000074;regulation of progression through cell cycle;4.12634890176221e-07!GO:0006916;anti-apoptosis;4.32236266217877e-07!GO:0009109;coenzyme catabolic process;4.32236266217877e-07!GO:0051726;regulation of cell cycle;4.42338916967024e-07!GO:0009719;response to endogenous stimulus;5.68128088104184e-07!GO:0006281;DNA repair;5.73678665418711e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.33086598517707e-07!GO:0000278;mitotic cell cycle;7.14505013505323e-07!GO:0031252;leading edge;8.1489852335399e-07!GO:0005839;proteasome core complex (sensu Eukaryota);8.30154529716462e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.02047332946178e-06!GO:0009117;nucleotide metabolic process;1.0356631211125e-06!GO:0031982;vesicle;1.34486807319353e-06!GO:0050794;regulation of cellular process;1.39418246509528e-06!GO:0031410;cytoplasmic vesicle;1.43276599052253e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.75979439970004e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.75979439970004e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.75979439970004e-06!GO:0043038;amino acid activation;1.79518457835468e-06!GO:0006418;tRNA aminoacylation for protein translation;1.79518457835468e-06!GO:0043039;tRNA aminoacylation;1.79518457835468e-06!GO:0008361;regulation of cell size;2.47349434226836e-06!GO:0000139;Golgi membrane;3.10980681386973e-06!GO:0016049;cell growth;3.14227017858672e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.17713116469688e-06!GO:0016564;transcription repressor activity;3.66656674316257e-06!GO:0009108;coenzyme biosynthetic process;3.6948894409648e-06!GO:0045259;proton-transporting ATP synthase complex;3.7368972256422e-06!GO:0043566;structure-specific DNA binding;3.76125069974787e-06!GO:0016853;isomerase activity;4.22467148827838e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.29891583913979e-06!GO:0007005;mitochondrion organization and biogenesis;4.36714153958092e-06!GO:0031324;negative regulation of cellular metabolic process;4.53242643588991e-06!GO:0015980;energy derivation by oxidation of organic compounds;4.59118337743257e-06!GO:0006752;group transfer coenzyme metabolic process;4.67815994767515e-06!GO:0003714;transcription corepressor activity;4.89357780117e-06!GO:0000245;spliceosome assembly;5.42458430612249e-06!GO:0065002;intracellular protein transport across a membrane;5.49006815647185e-06!GO:0008654;phospholipid biosynthetic process;5.99782236407821e-06!GO:0005525;GTP binding;6.13263604176227e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.20380645764816e-06!GO:0005798;Golgi-associated vesicle;6.24717925596703e-06!GO:0004298;threonine endopeptidase activity;6.6444802026086e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;6.75540979072649e-06!GO:0045786;negative regulation of progression through cell cycle;7.1219252517307e-06!GO:0005769;early endosome;7.9857664416879e-06!GO:0006364;rRNA processing;8.16433533712626e-06!GO:0005643;nuclear pore;9.39820400157964e-06!GO:0051170;nuclear import;9.99028324742759e-06!GO:0006613;cotranslational protein targeting to membrane;1.12833067755548e-05!GO:0030133;transport vesicle;1.13896738140531e-05!GO:0001558;regulation of cell growth;1.15496108973899e-05!GO:0003697;single-stranded DNA binding;1.1724358771451e-05!GO:0016072;rRNA metabolic process;1.49387496391875e-05!GO:0032446;protein modification by small protein conjugation;1.54474114320131e-05!GO:0006323;DNA packaging;1.58740717333851e-05!GO:0006606;protein import into nucleus;1.59015657064201e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.86143821294018e-05!GO:0009892;negative regulation of metabolic process;1.90680365703973e-05!GO:0051789;response to protein stimulus;2.03641072224202e-05!GO:0006986;response to unfolded protein;2.03641072224202e-05!GO:0003713;transcription coactivator activity;2.05898143311308e-05!GO:0016567;protein ubiquitination;2.21751368061049e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.31751285246632e-05!GO:0016859;cis-trans isomerase activity;2.37166073716157e-05!GO:0019843;rRNA binding;2.78099753883926e-05!GO:0051276;chromosome organization and biogenesis;3.16654988777487e-05!GO:0019867;outer membrane;3.17569209936827e-05!GO:0016787;hydrolase activity;3.24634773549998e-05!GO:0032561;guanyl ribonucleotide binding;3.25195099504494e-05!GO:0019001;guanyl nucleotide binding;3.25195099504494e-05!GO:0044262;cellular carbohydrate metabolic process;3.63134662083115e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.70016267802375e-05!GO:0031968;organelle outer membrane;3.92684549184486e-05!GO:0016563;transcription activator activity;3.92684549184486e-05!GO:0005762;mitochondrial large ribosomal subunit;4.24744723511515e-05!GO:0000315;organellar large ribosomal subunit;4.24744723511515e-05!GO:0005667;transcription factor complex;4.71129808209081e-05!GO:0030867;rough endoplasmic reticulum membrane;5.71168418358807e-05!GO:0016740;transferase activity;5.72446874737952e-05!GO:0050789;regulation of biological process;5.93535880704691e-05!GO:0007243;protein kinase cascade;6.18487264038223e-05!GO:0016126;sterol biosynthetic process;6.70056921456303e-05!GO:0046930;pore complex;6.99353939951467e-05!GO:0005905;coated pit;7.44635425391911e-05!GO:0045454;cell redox homeostasis;8.58939542260979e-05!GO:0006793;phosphorus metabolic process;9.79690997637777e-05!GO:0006796;phosphate metabolic process;9.79690997637777e-05!GO:0000151;ubiquitin ligase complex;9.86450490319518e-05!GO:0016568;chromatin modification;0.000102834429906307!GO:0030029;actin filament-based process;0.000105438185327999!GO:0033116;ER-Golgi intermediate compartment membrane;0.000106015278127227!GO:0005791;rough endoplasmic reticulum;0.000115281648664089!GO:0051427;hormone receptor binding;0.000116053976553037!GO:0043021;ribonucleoprotein binding;0.00013091021708509!GO:0003724;RNA helicase activity;0.00013091021708509!GO:0016481;negative regulation of transcription;0.00013091021708509!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000163472406756679!GO:0006403;RNA localization;0.000164015277356937!GO:0050657;nucleic acid transport;0.000168426337083817!GO:0051236;establishment of RNA localization;0.000168426337083817!GO:0050658;RNA transport;0.000168426337083817!GO:0005741;mitochondrial outer membrane;0.0001711254200285!GO:0005048;signal sequence binding;0.000195161955634549!GO:0000314;organellar small ribosomal subunit;0.000195811074986079!GO:0005763;mitochondrial small ribosomal subunit;0.000195811074986079!GO:0016779;nucleotidyltransferase activity;0.000197701286801407!GO:0006260;DNA replication;0.0002029529805946!GO:0008092;cytoskeletal protein binding;0.000203020708121859!GO:0015630;microtubule cytoskeleton;0.000224947944820388!GO:0035257;nuclear hormone receptor binding;0.00023462174189128!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000281716174352107!GO:0006612;protein targeting to membrane;0.000286790243234742!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000301736400531874!GO:0005885;Arp2/3 protein complex;0.000362127359304787!GO:0005694;chromosome;0.000377903020519583!GO:0019899;enzyme binding;0.000391684846830778!GO:0016310;phosphorylation;0.000404215185042828!GO:0065004;protein-DNA complex assembly;0.000412422550737857!GO:0048522;positive regulation of cellular process;0.000427752740788206!GO:0046474;glycerophospholipid biosynthetic process;0.000438041626786748!GO:0031902;late endosome membrane;0.000480811511085141!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000509174489497323!GO:0004576;oligosaccharyl transferase activity;0.000529606438615216!GO:0005813;centrosome;0.000540492597361028!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000560664133757762!GO:0008250;oligosaccharyl transferase complex;0.000570878484382566!GO:0008610;lipid biosynthetic process;0.000573308442506702!GO:0040008;regulation of growth;0.000606867722170835!GO:0000087;M phase of mitotic cell cycle;0.000636969816902771!GO:0030663;COPI coated vesicle membrane;0.000679134552944108!GO:0030126;COPI vesicle coat;0.000679134552944108!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00069117827678894!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000709139456230072!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000780087367385642!GO:0007067;mitosis;0.000823592385120818!GO:0048471;perinuclear region of cytoplasm;0.000856465971775936!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000920908952505938!GO:0006695;cholesterol biosynthetic process;0.000957257906966726!GO:0051920;peroxiredoxin activity;0.000983463720124268!GO:0006333;chromatin assembly or disassembly;0.00100940575628675!GO:0007010;cytoskeleton organization and biogenesis;0.00103585103889366!GO:0030027;lamellipodium;0.00109545447465557!GO:0005815;microtubule organizing center;0.0011242440398265!GO:0018196;peptidyl-asparagine modification;0.0011319530094062!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0011319530094062!GO:0030880;RNA polymerase complex;0.00115983022952398!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00117203094614047!GO:0016197;endosome transport;0.00122679255163157!GO:0050662;coenzyme binding;0.00125696215435117!GO:0007050;cell cycle arrest;0.00132097731724836!GO:0001726;ruffle;0.00135014538843825!GO:0043623;cellular protein complex assembly;0.00136172466347036!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00138419038782601!GO:0006891;intra-Golgi vesicle-mediated transport;0.0014133772407924!GO:0009165;nucleotide biosynthetic process;0.00150660461307244!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0015374616714071!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0015374616714071!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0015374616714071!GO:0044427;chromosomal part;0.00159776170408852!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00161143489240702!GO:0043681;protein import into mitochondrion;0.00163786767126697!GO:0016044;membrane organization and biogenesis;0.00169371579084861!GO:0003899;DNA-directed RNA polymerase activity;0.00175913177245704!GO:0000785;chromatin;0.00176932073169584!GO:0008186;RNA-dependent ATPase activity;0.00187588277999409!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00195490247422267!GO:0007034;vacuolar transport;0.00199052020418722!GO:0022890;inorganic cation transmembrane transporter activity;0.00199629628348991!GO:0007264;small GTPase mediated signal transduction;0.00205209005710742!GO:0022403;cell cycle phase;0.00205355971820685!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00205904443531401!GO:0030132;clathrin coat of coated pit;0.00208381897891089!GO:0046489;phosphoinositide biosynthetic process;0.00216190373485034!GO:0030137;COPI-coated vesicle;0.00219394800814947!GO:0051028;mRNA transport;0.00221740759779297!GO:0048500;signal recognition particle;0.00222805107055732!GO:0046467;membrane lipid biosynthetic process;0.0022479520226632!GO:0006626;protein targeting to mitochondrion;0.00230204919463218!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00241780960658576!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00244895151140658!GO:0000428;DNA-directed RNA polymerase complex;0.00244895151140658!GO:0005774;vacuolar membrane;0.00248421255827397!GO:0051287;NAD binding;0.00254688434990272!GO:0051252;regulation of RNA metabolic process;0.00260633745364204!GO:0031072;heat shock protein binding;0.00261910459730859!GO:0042802;identical protein binding;0.00264465211215907!GO:0008154;actin polymerization and/or depolymerization;0.0026580920725867!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00286469375951357!GO:0015399;primary active transmembrane transporter activity;0.00286469375951357!GO:0043284;biopolymer biosynthetic process;0.00296288490081932!GO:0003690;double-stranded DNA binding;0.00300271141186758!GO:0051301;cell division;0.00307521249017005!GO:0009967;positive regulation of signal transduction;0.00323176931799734!GO:0030658;transport vesicle membrane;0.0032673859828286!GO:0045045;secretory pathway;0.00338844591496544!GO:0015992;proton transport;0.00345242303894904!GO:0031901;early endosome membrane;0.00348031025947859!GO:0006509;membrane protein ectodomain proteolysis;0.00354388472176049!GO:0033619;membrane protein proteolysis;0.00354388472176049!GO:0006818;hydrogen transport;0.0035623036323538!GO:0030041;actin filament polymerization;0.00367778695449474!GO:0065009;regulation of a molecular function;0.00367778695449474!GO:0043488;regulation of mRNA stability;0.00367778695449474!GO:0043487;regulation of RNA stability;0.00367778695449474!GO:0006383;transcription from RNA polymerase III promoter;0.00373799289634225!GO:0019752;carboxylic acid metabolic process;0.00379424578494214!GO:0030118;clathrin coat;0.00379424578494214!GO:0006979;response to oxidative stress;0.00389451413685003!GO:0006082;organic acid metabolic process;0.00403412351666084!GO:0006414;translational elongation;0.0041572893570548!GO:0004004;ATP-dependent RNA helicase activity;0.0045547200086552!GO:0003729;mRNA binding;0.00461102316842489!GO:0051329;interphase of mitotic cell cycle;0.0047062019550345!GO:0008180;signalosome;0.00477147524662401!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00498566130060025!GO:0045047;protein targeting to ER;0.00498566130060025!GO:0008047;enzyme activator activity;0.00504798084262782!GO:0051128;regulation of cellular component organization and biogenesis;0.00506166437009189!GO:0016408;C-acyltransferase activity;0.00510357012266563!GO:0065007;biological regulation;0.00517748485516873!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00534823073007066!GO:0006118;electron transport;0.00534858064539804!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00545533123351188!GO:0035258;steroid hormone receptor binding;0.00561425094343065!GO:0007041;lysosomal transport;0.00568360030809786!GO:0016363;nuclear matrix;0.00573490557303721!GO:0033673;negative regulation of kinase activity;0.00576936346241282!GO:0006469;negative regulation of protein kinase activity;0.00576936346241282!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00582141711158401!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00582141711158401!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00591755317467688!GO:0006650;glycerophospholipid metabolic process;0.00610358997234117!GO:0019222;regulation of metabolic process;0.00615640798252944!GO:0007033;vacuole organization and biogenesis;0.00625954202588961!GO:0005869;dynactin complex;0.00642458622912109!GO:0051087;chaperone binding;0.00646470613646096!GO:0005765;lysosomal membrane;0.00664504343310031!GO:0046483;heterocycle metabolic process;0.00667810509692348!GO:0044437;vacuolar part;0.006711245812157!GO:0007040;lysosome organization and biogenesis;0.00684462370298228!GO:0008312;7S RNA binding;0.00716387308334293!GO:0030134;ER to Golgi transport vesicle;0.00747727570177933!GO:0051540;metal cluster binding;0.00754781132545496!GO:0051536;iron-sulfur cluster binding;0.00754781132545496!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00796036762056065!GO:0003746;translation elongation factor activity;0.00803030185592549!GO:0005520;insulin-like growth factor binding;0.00806445465953242!GO:0005096;GTPase activator activity;0.00809211681275726!GO:0017166;vinculin binding;0.00816044985144392!GO:0006740;NADPH regeneration;0.00819736859351406!GO:0006098;pentose-phosphate shunt;0.00819736859351406!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00824824516654608!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0082851708731925!GO:0015002;heme-copper terminal oxidase activity;0.0082851708731925!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0082851708731925!GO:0004129;cytochrome-c oxidase activity;0.0082851708731925!GO:0051348;negative regulation of transferase activity;0.00861013554124616!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00889773620811277!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00889773620811277!GO:0030659;cytoplasmic vesicle membrane;0.00893379168798901!GO:0030660;Golgi-associated vesicle membrane;0.00895912694837547!GO:0030521;androgen receptor signaling pathway;0.00898560189852515!GO:0006839;mitochondrial transport;0.00915165155763162!GO:0030127;COPII vesicle coat;0.00940909695396682!GO:0012507;ER to Golgi transport vesicle membrane;0.00940909695396682!GO:0030176;integral to endoplasmic reticulum membrane;0.0102431950564552!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0109979268793793!GO:0003779;actin binding;0.0112830157194197!GO:0051325;interphase;0.0112847116971219!GO:0032940;secretion by cell;0.0117768766004084!GO:0005684;U2-dependent spliceosome;0.011795173307052!GO:0007006;mitochondrial membrane organization and biogenesis;0.0118079549085222!GO:0031529;ruffle organization and biogenesis;0.0118232368705948!GO:0006354;RNA elongation;0.0120411271775867!GO:0008139;nuclear localization sequence binding;0.0120411271775867!GO:0048468;cell development;0.0123024307224969!GO:0030119;AP-type membrane coat adaptor complex;0.0131486091448502!GO:0043022;ribosome binding;0.0133153963574512!GO:0006497;protein amino acid lipidation;0.0133397774439421!GO:0016251;general RNA polymerase II transcription factor activity;0.0133969457922439!GO:0043492;ATPase activity, coupled to movement of substances;0.0134733941872372!GO:0008632;apoptotic program;0.0138078542372465!GO:0006402;mRNA catabolic process;0.01383275851833!GO:0030125;clathrin vesicle coat;0.0139586702710009!GO:0030665;clathrin coated vesicle membrane;0.0139586702710009!GO:0006892;post-Golgi vesicle-mediated transport;0.0140207277373688!GO:0006595;polyamine metabolic process;0.0140528883083829!GO:0006778;porphyrin metabolic process;0.0141435412241422!GO:0033013;tetrapyrrole metabolic process;0.0141435412241422!GO:0006007;glucose catabolic process;0.0143507589752574!GO:0005862;muscle thin filament tropomyosin;0.0144412636365372!GO:0045893;positive regulation of transcription, DNA-dependent;0.0148075920685395!GO:0045892;negative regulation of transcription, DNA-dependent;0.0148471421180109!GO:0006334;nucleosome assembly;0.0151605967653922!GO:0048487;beta-tubulin binding;0.0155695099719957!GO:0008022;protein C-terminus binding;0.0157703142460985!GO:0003711;transcription elongation regulator activity;0.0158727928505642!GO:0048518;positive regulation of biological process;0.0158935128788639!GO:0022406;membrane docking;0.0159180016384527!GO:0048278;vesicle docking;0.0159180016384527!GO:0050681;androgen receptor binding;0.0160414400996033!GO:0051272;positive regulation of cell motility;0.0161571168448966!GO:0040017;positive regulation of locomotion;0.0161571168448966!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0162179851143098!GO:0000339;RNA cap binding;0.016285968946158!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0170579329546103!GO:0033043;regulation of organelle organization and biogenesis;0.0170579329546103!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0172042254950218!GO:0035035;histone acetyltransferase binding;0.0172843288862217!GO:0051539;4 iron, 4 sulfur cluster binding;0.0172843288862217!GO:0004177;aminopeptidase activity;0.0176260944906705!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0180516544802392!GO:0046519;sphingoid metabolic process;0.0181710037052046!GO:0005975;carbohydrate metabolic process;0.0185849736930092!GO:0005832;chaperonin-containing T-complex;0.0185849736930092!GO:0045941;positive regulation of transcription;0.0186510685834404!GO:0006950;response to stress;0.0191863820483059!GO:0030032;lamellipodium biogenesis;0.0193475743520408!GO:0030984;kininogen binding;0.0194899650471866!GO:0004213;cathepsin B activity;0.0194899650471866!GO:0006904;vesicle docking during exocytosis;0.0194899650471866!GO:0000059;protein import into nucleus, docking;0.019690367701724!GO:0031418;L-ascorbic acid binding;0.019690367701724!GO:0006790;sulfur metabolic process;0.0197106514995283!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0198529275426341!GO:0030518;steroid hormone receptor signaling pathway;0.0198780976197072!GO:0016272;prefoldin complex;0.0204990983842834!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0209490238902028!GO:0015631;tubulin binding;0.0211043502221478!GO:0044433;cytoplasmic vesicle part;0.0213085911977711!GO:0008168;methyltransferase activity;0.0214299324855564!GO:0031543;peptidyl-proline dioxygenase activity;0.0218736984775402!GO:0051168;nuclear export;0.0220035208983793!GO:0000209;protein polyubiquitination;0.0226364276436478!GO:0031497;chromatin assembly;0.0228094931206868!GO:0005100;Rho GTPase activator activity;0.0228094931206868!GO:0006506;GPI anchor biosynthetic process;0.0231120586672033!GO:0030131;clathrin adaptor complex;0.0231661928189763!GO:0019798;procollagen-proline dioxygenase activity;0.0231661928189763!GO:0042158;lipoprotein biosynthetic process;0.0232382512752181!GO:0000096;sulfur amino acid metabolic process;0.023264570709101!GO:0007021;tubulin folding;0.023476083295557!GO:0006289;nucleotide-excision repair;0.0238272523553792!GO:0006693;prostaglandin metabolic process;0.0238785129107104!GO:0006692;prostanoid metabolic process;0.0238785129107104!GO:0016741;transferase activity, transferring one-carbon groups;0.0241813132772935!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0241813132772935!GO:0030384;phosphoinositide metabolic process;0.0242810922965449!GO:0032984;macromolecular complex disassembly;0.025695447830701!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0258622027361032!GO:0044452;nucleolar part;0.0259649346827702!GO:0048037;cofactor binding;0.0262971120193187!GO:0003756;protein disulfide isomerase activity;0.0263632299428718!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0263632299428718!GO:0006607;NLS-bearing substrate import into nucleus;0.0263768516167762!GO:0030833;regulation of actin filament polymerization;0.0263805301997171!GO:0045792;negative regulation of cell size;0.026455320076682!GO:0050811;GABA receptor binding;0.0267288131195244!GO:0031625;ubiquitin protein ligase binding;0.0274330961087977!GO:0004228;gelatinase A activity;0.027770235833284!GO:0001955;blood vessel maturation;0.027770235833284!GO:0006505;GPI anchor metabolic process;0.0286926136505879!GO:0042168;heme metabolic process;0.0287297594046229!GO:0008033;tRNA processing;0.0287297594046229!GO:0006672;ceramide metabolic process;0.0288663477077246!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0289323267676822!GO:0003678;DNA helicase activity;0.0293848343354094!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0295326928264383!GO:0030308;negative regulation of cell growth;0.0296492568277262!GO:0007160;cell-matrix adhesion;0.0302383247568084!GO:0030508;thiol-disulfide exchange intermediate activity;0.0303117054503633!GO:0000049;tRNA binding;0.0307885569277266!GO:0006352;transcription initiation;0.0314036215414224!GO:0009225;nucleotide-sugar metabolic process;0.0320988693697529!GO:0050790;regulation of catalytic activity;0.0321204731205401!GO:0000082;G1/S transition of mitotic cell cycle;0.0321315532022424!GO:0015629;actin cytoskeleton;0.0328972768471602!GO:0030145;manganese ion binding;0.0328972768471602!GO:0003684;damaged DNA binding;0.0329303985349438!GO:0022408;negative regulation of cell-cell adhesion;0.0329303985349438!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0331732030433983!GO:0006739;NADP metabolic process;0.0338204940322466!GO:0043624;cellular protein complex disassembly;0.0339835718277211!GO:0031589;cell-substrate adhesion;0.0340629734838257!GO:0012506;vesicle membrane;0.0354161895817751!GO:0045334;clathrin-coated endocytic vesicle;0.0354853232664569!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0356069253340431!GO:0007030;Golgi organization and biogenesis;0.036292964120567!GO:0031124;mRNA 3'-end processing;0.0364539970101844!GO:0030199;collagen fibril organization;0.0365666791316213!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0365666791316213!GO:0001516;prostaglandin biosynthetic process;0.0370649184831987!GO:0046457;prostanoid biosynthetic process;0.0370649184831987!GO:0006897;endocytosis;0.0370767257847936!GO:0010324;membrane invagination;0.0370767257847936!GO:0048144;fibroblast proliferation;0.0371766850026992!GO:0048145;regulation of fibroblast proliferation;0.0371766850026992!GO:0006807;nitrogen compound metabolic process;0.0373216273792213!GO:0000279;M phase;0.0374018820710414!GO:0000075;cell cycle checkpoint;0.0377612114386109!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0382231114989936!GO:0033559;unsaturated fatty acid metabolic process;0.0382765695949708!GO:0006636;unsaturated fatty acid biosynthetic process;0.0382765695949708!GO:0051059;NF-kappaB binding;0.0385994241946663!GO:0001952;regulation of cell-matrix adhesion;0.0387976475746253!GO:0005484;SNAP receptor activity;0.0395506398118545!GO:0006520;amino acid metabolic process;0.0403697805987726!GO:0043407;negative regulation of MAP kinase activity;0.0403697805987726!GO:0004287;prolyl oligopeptidase activity;0.0405279093121326!GO:0006643;membrane lipid metabolic process;0.0405279093121326!GO:0031371;ubiquitin conjugating enzyme complex;0.0405459478463439!GO:0048146;positive regulation of fibroblast proliferation;0.0405676857200785!GO:0030911;TPR domain binding;0.0416524886983952!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0419231336642678!GO:0045936;negative regulation of phosphate metabolic process;0.0420883733920583!GO:0051101;regulation of DNA binding;0.0452018412215225!GO:0043433;negative regulation of transcription factor activity;0.0454262367988836!GO:0008538;proteasome activator activity;0.0456957601062604!GO:0006302;double-strand break repair;0.0458465742012566!GO:0006779;porphyrin biosynthetic process;0.0458475612816831!GO:0033014;tetrapyrrole biosynthetic process;0.0458475612816831!GO:0008097;5S rRNA binding;0.0463658736267238!GO:0005099;Ras GTPase activator activity;0.0465358572238341!GO:0043241;protein complex disassembly;0.0466303502769181!GO:0043130;ubiquitin binding;0.0467366149426206!GO:0032182;small conjugating protein binding;0.0467366149426206!GO:0006376;mRNA splice site selection;0.0471668428463472!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0471668428463472!GO:0016125;sterol metabolic process;0.0474936597406129!GO:0005758;mitochondrial intermembrane space;0.0487633688844501!GO:0003702;RNA polymerase II transcription factor activity;0.0488174905814579!GO:0001953;negative regulation of cell-matrix adhesion;0.0488174905814579!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0492586870360169!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0497774445872269
|sample_id=11750
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone marrow
|top_motifs=MAFB:1.9536552987;NKX2-1,4:1.70991172254;ATF6:1.67771571893;ZNF238:1.65777672911;NFATC1..3:1.61712026759;EN1,2:1.32292992465;ALX4:1.18233910739;RXR{A,B,G}:1.1673662094;NFE2L1:1.10483595622;GZF1:1.0582500027;SRF:1.04897914085;HOX{A4,D4}:0.967561088657;UFEwm:0.959722470252;GFI1B:0.955803609271;HMX1:0.925442019215;AHR_ARNT_ARNT2:0.891139326185;FOXL1:0.890333544406;HES1:0.872889651118;NKX2-2,8:0.868175056008;NANOG{mouse}:0.834073429652;PAX4:0.821427729516;ESR1:0.792112067565;SREBF1,2:0.758888932791;CDC5L:0.742073520777;PRDM1:0.731475947874;XBP1:0.71015034175;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.680063474399;GATA4:0.639144248999;bHLH_family:0.633642682616;TFCP2:0.621813719865;EBF1:0.598439147608;NFE2L2:0.567244398468;JUN:0.564145395181;TEAD1:0.550664288514;HSF1,2:0.544268412726;PAX1,9:0.534820525275;FOS_FOS{B,L1}_JUN{B,D}:0.525628704964;TAL1_TCF{3,4,12}:0.520980322331;FOSL2:0.50999539439;STAT2,4,6:0.497442458843;TLX1..3_NFIC{dimer}:0.496011148749;CREB1:0.479621717877;BACH2:0.477130338898;AIRE:0.468228090655;NKX3-2:0.468169465024;NR3C1:0.453816667889;HAND1,2:0.45334840843;TP53:0.451474496467;NR6A1:0.450696167106;ATF5_CREB3:0.449968369437;HLF:0.44669805007;MYBL2:0.436133732921;MEF2{A,B,C,D}:0.423475728196;NKX6-1,2:0.415384323071;MTE{core}:0.412396068971;GTF2I:0.396153108498;GLI1..3:0.386312358983;HOX{A5,B5}:0.377982725069;BPTF:0.37677381275;EVI1:0.373347387841;NFIX:0.353869376863;PATZ1:0.346240090921;RUNX1..3:0.343084298521;ESRRA:0.342920100546;GTF2A1,2:0.34076501966;TBX4,5:0.336757789903;NHLH1,2:0.336448162481;KLF4:0.325844718229;TEF:0.325816591166;TBP:0.320674237993;NFE2:0.319939976072;ZBTB6:0.315669766816;NKX3-1:0.310985624952;RFX1:0.310583219399;RFX2..5_RFXANK_RFXAP:0.299385347439;MZF1:0.284416683944;RXRA_VDR{dimer}:0.272082889124;LHX3,4:0.271516165984;HIF1A:0.262296605282;SMAD1..7,9:0.254618606348;ZIC1..3:0.236381300366;POU3F1..4:0.236322645071;EP300:0.230631863727;ATF4:0.22144102063;DMAP1_NCOR{1,2}_SMARC:0.212732840573;STAT1,3:0.202159318145;IKZF1:0.201724428192;IRF1,2:0.195784557633;FOX{I1,J2}:0.188620015898;HBP1_HMGB_SSRP1_UBTF:0.15901632668;PAX5:0.157395088146;ZBTB16:0.137079260041;TFAP2{A,C}:0.127067474379;FOXO1,3,4:0.109982259831;HIC1:0.101844397464;FOXP3:0.0931657341444;PAX2:0.0870991068551;MTF1:0.0859094640329;YY1:0.083941991483;EGR1..3:0.0784901710472;RREB1:0.0716388956366;MYFfamily:0.0676697013723;TFAP2B:0.0672328151525;DBP:0.0518052599688;GCM1,2:0.0387860383236;ZNF423:0.0350328352253;MAZ:0.0202597864499;HNF1A:0.0111545052817;PAX3,7:0.00896245811587;NR1H4:0.00379163665533;SOX17:-0.0177428222752;TLX2:-0.0199349908828;NKX2-3_NKX2-5:-0.0597673120414;REST:-0.0619759157614;TFAP4:-0.0783901277152;PRRX1,2:-0.0851026767927;PAX8:-0.0917209821788;FOXD3:-0.096567320768;ARID5B:-0.111076360161;ATF2:-0.115557415267;NRF1:-0.131557725403;ZNF384:-0.139446454427;SP1:-0.159318631155;STAT5{A,B}:-0.170137929646;LEF1_TCF7_TCF7L1,2:-0.172556136062;TGIF1:-0.175903082222;ZFP161:-0.178809687705;NFKB1_REL_RELA:-0.192785411995;SPZ1:-0.194093529953;GFI1:-0.200952545599;LMO2:-0.228280590089;FOX{D1,D2}:-0.255054765482;ZNF148:-0.267154581196;ELK1,4_GABP{A,B1}:-0.268897365202;HMGA1,2:-0.280046965262;HNF4A_NR2F1,2:-0.299046523832;PPARG:-0.304653181092;AR:-0.324601581839;MED-1{core}:-0.328654614821;CEBPA,B_DDIT3:-0.348170852328;TFDP1:-0.351385731968;XCPE1{core}:-0.365987065283;ZNF143:-0.392009275699;SOX5:-0.397585492237;MYB:-0.435139472207;IRF7:-0.436953387982;POU1F1:-0.440570216037;NFIL3:-0.447615779355;NANOG:-0.451815414231;ETS1,2:-0.472175855641;PBX1:-0.479893623964;CRX:-0.487111057877;POU6F1:-0.487355459648;SOX2:-0.488677858844;RORA:-0.499069904777;SPI1:-0.502618285682;PDX1:-0.503174931227;FOXN1:-0.520485154938;ELF1,2,4:-0.524161696465;CDX1,2,4:-0.533427456033;SPIB:-0.550314660347;ADNP_IRX_SIX_ZHX:-0.571449530536;VSX1,2:-0.572280200339;MYOD1:-0.583254478062;FOXA2:-0.611570290793;NFY{A,B,C}:-0.640891512168;NR5A1,2:-0.665366217068;POU5F1:-0.700944521907;OCT4_SOX2{dimer}:-0.732741811652;PAX6:-0.747642536378;E2F1..5:-0.750413006816;IKZF2:-0.759814794157;FOXP1:-0.768625012443;FOXM1:-0.784771210434;RBPJ:-0.784898891217;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.809568969932;CUX2:-0.814182782682;HOX{A6,A7,B6,B7}:-0.832138774376;FOX{F1,F2,J1}:-0.840332601539;FOXQ1:-0.852699998122;BREu{core}:-0.85459053482;GATA6:-0.854843310856;HOXA9_MEIS1:-0.882081328872;ZEB1:-0.913440109183;SNAI1..3:-0.931646079547;ONECUT1,2:-0.970220608591;TOPORS:-1.00190055715;POU2F1..3:-1.03226340655;SOX{8,9,10}:-1.09200964673;T:-1.21102202326;ALX1:-1.35228430733;PITX1..3:-1.70566155186
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11750-123G4;search_select_hide=table117:FF:11750-123G4
}}
}}

Latest revision as of 18:17, 4 June 2020

Name:mesenchymal precursor cell - bone marrow, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12366
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005856
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12366 CAGE DRX008548 DRR009420
Accession ID Hg19

Library idBAMCTSS
CNhs12366 DRZ000845 DRZ002230
Accession ID Hg38

Library idBAMCTSS
CNhs12366 DRZ012195 DRZ013580
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0685
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.141
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.195
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0838
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.118
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0753
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.551
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.137
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0791
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.14
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.506
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.245
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.14
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0103
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.195
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0753
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0363
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.362
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.447
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.163
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0753
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.289
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.195
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.14
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.245
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.367
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.00798
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.924
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12366

Jaspar motifP-value
MA0002.20.955
MA0003.10.886
MA0004.10.535
MA0006.10.378
MA0007.10.283
MA0009.10.838
MA0014.10.823
MA0017.10.436
MA0018.20.889
MA0019.10.183
MA0024.13.06237e-6
MA0025.10.00545
MA0027.10.929
MA0028.10.00471
MA0029.10.431
MA0030.10.106
MA0031.10.418
MA0035.23.14237e-4
MA0038.10.144
MA0039.20.00118
MA0040.10.378
MA0041.10.354
MA0042.10.292
MA0043.10.879
MA0046.10.501
MA0047.20.646
MA0048.10.209
MA0050.10.766
MA0051.10.91
MA0052.10.0472
MA0055.10.574
MA0057.10.712
MA0058.10.125
MA0059.10.338
MA0060.15.68289e-7
MA0061.10.513
MA0062.29.35016e-8
MA0065.20.0486
MA0066.10.613
MA0067.10.121
MA0068.10.0807
MA0069.10.171
MA0070.10.679
MA0071.10.185
MA0072.10.626
MA0073.10.883
MA0074.10.123
MA0076.17.06473e-4
MA0077.10.0282
MA0078.10.334
MA0079.20.924
MA0080.25.89137e-8
MA0081.10.0406
MA0083.12.89226e-7
MA0084.10.546
MA0087.10.91
MA0088.10.18
MA0090.12.80814e-4
MA0091.10.395
MA0092.10.824
MA0093.10.337
MA0099.29.45473e-9
MA0100.10.569
MA0101.10.194
MA0102.20.912
MA0103.12.16274e-4
MA0104.20.781
MA0105.10.913
MA0106.10.299
MA0107.10.108
MA0108.20.00565
MA0111.10.0669
MA0112.20.0574
MA0113.10.952
MA0114.10.121
MA0115.10.127
MA0116.10.391
MA0117.10.0935
MA0119.10.375
MA0122.10.796
MA0124.10.903
MA0125.10.238
MA0131.10.114
MA0135.10.732
MA0136.19.31077e-8
MA0137.20.15
MA0138.20.687
MA0139.10.862
MA0140.10.0162
MA0141.10.892
MA0142.10.32
MA0143.10.665
MA0144.10.193
MA0145.10.757
MA0146.10.0701
MA0147.10.933
MA0148.10.333
MA0149.10.677
MA0150.10.0192
MA0152.15.35396e-4
MA0153.10.632
MA0154.10.498
MA0155.10.891
MA0156.13.78046e-7
MA0157.10.572
MA0159.10.399
MA0160.10.508
MA0162.10.407
MA0163.10.785
MA0164.10.99
MA0258.10.498
MA0259.10.565



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12366

Novel motifP-value
10.85
100.397
1000.541
1010.248
1020.034
1030.376
1040.987
1050.718
1060.921
1070.52
1080.714
1090.941
110.846
1100.245
1110.565
1120.886
1130.00144
1140.379
1150.889
1160.666
1170.962
1180.47
1190.703
120.441
1200.682
1210.985
1220.0615
1231.48386e-5
1240.213
1250.862
1260.741
1270.661
1280.372
1290.603
130.793
1300.473
1310.279
1320.786
1330.499
1340.0762
1350.483
1360.641
1370.971
1380.761
1390.816
140.579
1400.0555
1410.0914
1420.505
1430.465
1440.356
1450.577
1460.617
1470.0415
1480.787
1490.237
150.939
1500.672
1510.77
1520.761
1530.282
1540.581
1550.0157
1560.207
1570.167
1580.0969
1590.102
160.067
1600.45
1610.171
1620.806
1630.73
1640.164
1650.407
1660.016
1670.978
1680.646
1690.247
170.872
180.118
190.0346
20.677
200.834
210.547
220.295
230.0845
240.33
250.291
260.531
270.758
280.354
290.233
30.846
300.347
310.807
321.34982e-6
330.468
340.268
350.824
360.033
370.0301
380.277
390.185
40.0149
400.0435
410.881
420.409
430.752
440.849
450.618
460.666
470.0601
480.0958
490.267
50.779
500.48
510.538
520.848
530.0518
540.852
550.0598
560.903
570.996
580.219
590.918
60.404
600.665
610.711
620.52
630.295
640.413
650.769
660.372
670.969
680.953
690.77
70.472
700.938
710.602
720.851
730.129
740.318
750.963
760.793
770.263
780.0474
790.0118
80.77
800.594
810.969
820.751
830.972
840.946
850.303
860.261
870.939
880.676
890.0857
90.317
900.775
910.533
920.0909
930.536
940.967
950.67
960.929
970.29
980.322
990.879



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12366


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002092 (bone marrow cell)
0002540 (mesenchymal stem cell of the bone marrow)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000269 (human mesenchymal precursor cell of bone marrow sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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