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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005438
|accession_numbers=CAGE;DRX007940;DRR008812;DRZ000237;DRZ001622;DRZ011587;DRZ012972
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000076,CL:0000077,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002321
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000255,CL:0000077
|ancestors_in_disease_facet=DOID:4,DOID:7
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0102424
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr20:30433396..30433414,-!p1@FOXS1!2.01!102.02!FOXS1;;chr6:10415276..10415341,-!p2@TFAP2A!1.71!60.76!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.59!61.44!TFAP2A;;chr3:12330560..12330579,+!p1@PPARG!1.37!25.84!PPARG;;chr6:1389789..1389821,+!p1@FOXF2!1.30!25.84!FOXF2;;chr15:83953397..83953425,-!p1@BNC1!1.30!21.76!BNC1;;chr6:10412392..10412409,-!p4@TFAP2A!1.29!21.31!TFAP2A;;chr21:38071430..38071456,+!p1@SIM2!1.29!18.59!SIM2;;chr12:54332608..54332636,+!p1@HOXC13!1.19!14.51!HOXC13;;chr17:46682321..46682362,-!p1@HOXB6!1.16!13.38!HOXB6;;chr2:172949484..172949522,+!p1@DLX1!1.15!13.15!DLX1;;chr11:61520075..61520136,+!p1@C11orf9!1.11!25.16!C11orf9;;chr18:19749541..19749557,+!p1@GATA6!1.10!36.50!GATA6;;chr10:8096772..8096787,+!p2@GATA3!1.10!13.60!GATA3;;chr5:50679228..50679288,+!p1@ISL1!1.08!11.11!ISL1;;chr7:35293685..35293718,-!p1@TBX20!1.08!11.11!TBX20;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.07!10.66!HOXC5;;chr8:72756667..72756736,-!p2@MSC!1.06!16.55!MSC;;chr8:72756063..72756125,-!p1@MSC!1.05!21.08!MSC;;chr5:134369905..134369972,-!p1@PITX1!1.04!15.42!PITX1;;chr12:80084167..80084197,-!p5@PAWR!1.03!23.35!PAWR;;chr8:60031619..60031676,-!p1@TOX!1.03!21.31!TOX;;chr11:46299199..46299233,+!p1@CREB3L1!1.02!49.88!CREB3L1;;chr19:45908292..45908374,-!p1@PPP1R13L!1.01!83.20!PPP1R13L;;chr2:172967621..172967637,-!p1@DLX2!1.01!24.94!DLX2;;chr12:26277817..26277863,-!p2@BHLHE41!0.99!12.02!BHLHE41;;chr3:169381420..169381535,-!p1@MECOM!0.99!10.43!MECOM;;chr7:19157248..19157268,-!p1@TWIST1!0.98!24.48!TWIST1;;chr20:42295745..42295765,+!p1@MYBL2!0.97!141.24!MYBL2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.97!86.37!GLIS2;;chr12:26277956..26277980,-!p1@BHLHE41!0.97!30.83!BHLHE41;;chr20:50721803..50721857,-!p2@ZFP64!0.97!13.38!ZFP64;;chr5:172662197..172662216,-!p1@NKX2-5!0.97!8.39!NKX2-5;;chr12:124873357..124873401,-!p1@NCOR2!0.96!96.35!NCOR2;;chr12:80084737..80084763,-!p3@PAWR!0.96!31.06!PAWR;;chr12:54393880..54393962,+!p1@HOXC9!0.96!8.16!HOXC9;;chr3:138665937..138665968,-!p1@FOXL2!0.93!7.48!FOXL2;;chr7:19157043..19157088,-!p2@TWIST1!0.92!19.04!TWIST1;;chr12:80085061..80085119,-!p6@PAWR!0.92!11.79!PAWR;;chrY:21906594..21906622,-!p1@KDM5D!0.92!7.25!KDM5D;;chr6:1312325..1312340,+!p1@FOXQ1!0.91!11.79!FOXQ1;;chr12:26277929..26277955,-!p3@BHLHE41!0.91!10.20!BHLHE41;;chr8:72756637..72756664,-!p3@MSC!0.91!8.16!MSC;;chr20:42295713..42295738,+!p2@MYBL2!0.90!42.85!MYBL2;;chr17:46687959..46688007,-!p2@HOXB7!0.90!9.75!HOXB7;;chr15:67418119..67418162,+!p5@SMAD3!0.90!7.71!SMAD3;;chr3:25470156..25470227,+!p2@RARB!0.90!7.03!RARB;;chr6:10412576..10412599,-!p5@TFAP2A!0.89!6.80!TFAP2A;;chr12:80084137..80084165,-!p10@PAWR!0.88!8.61!PAWR;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.88!6.57!SEBOX;;chr7:27153454..27153469,-!p2@HOXA3!0.88!6.57!HOXA3;;chr8:72756267..72756296,-!p4@MSC!0.87!9.75!MSC;;chr10:8096631..8096660,+!p1@GATA3!0.87!7.93!GATA3;;chr3:170076314..170076334,+!p2@SKIL!0.85!8.16!SKIL;;chr16:86544113..86544145,+!p1@FOXF1!0.84!7.48!FOXF1;;chr11:65667846..65667868,-!p1@FOSL1!0.83!163.91!FOSL1;;chr11:44331576..44331650,-!p1@ALX4!0.82!5.67!ALX4;;chr12:54394309..54394336,+!p2@HOXC9!0.82!5.67!HOXC9;;chr12:57853634..57853662,+!p2@GLI1!0.82!5.67!GLI1;;chr16:85932760..85932775,+!p1@IRF8!0.81!5.44!IRF8;;chr8:72756213..72756243,-!p5@MSC!0.79!6.80!MSC;;chr12:54402745..54402788,+!p1@HOXC8!0.79!5.21!HOXC8;;chr2:172967242..172967265,-!p2@DLX2!0.79!5.21!DLX2;;chr18:19749386..19749404,+!p2@GATA6!0.78!7.48!GATA6;;chr16:1429010..1429038,-!p5@UNKL!0.78!4.99!UNKL;;chr12:124873852..124873881,-!p3@NCOR2!0.77!32.42!NCOR2;;chr7:27835758..27835772,+!p3@TAX1BP1!0.77!6.80!TAX1BP1;;chr12:80084303..80084332,-!p1@PAWR!0.76!30.61!PAWR;;chr11:65667884..65667895,-!p2@FOSL1!0.76!20.18!FOSL1;;chr5:92918894..92918912,+!p2@NR2F1!0.76!16.78!NR2F1;;chr7:1577899..1577943,+!p3@MAFK!0.76!4.76!MAFK;;chr12:54332652..54332671,+!p2@HOXC13!0.76!4.76!HOXC13;;chr5:92918919..92918942,+!p1@NR2F1!0.75!22.44!NR2F1;;chr3:168864315..168864339,-!p2@MECOM!0.75!7.93!MECOM;;chr16:29818199..29818216,+!p11@MAZ!0.75!7.93!MAZ;;chr1:23885981..23886002,-!p1@ID3!0.74!884.83!ID3;;chr12:80084279..80084293,-!p8@PAWR!0.74!7.93!PAWR;;chr12:54332687..54332701,+!p3@HOXC13!0.74!4.53!HOXC13;;chr15:83953373..83953386,-!p2@BNC1!0.74!4.53!BNC1;;chr8:11561684..11561751,+!p1@GATA4!0.74!4.53!GATA4;;chr21:38071403..38071428,+!p2@SIM2!0.74!4.53!SIM2;;chr7:77428149..77428220,+!p1@PHTF2!0.73!49.20!PHTF2;;chr15:67418047..67418093,+!p4@SMAD3!0.73!5.67!SMAD3;;chr7:26191809..26191890,+!p1@NFE2L3!0.72!23.35!NFE2L3;;chr12:80083544..80083558,-!p13@PAWR!0.72!5.44!PAWR;;chr5:172662230..172662241,-!p3@NKX2-5!0.72!4.31!NKX2-5;;chr5:2751762..2751784,-!p1@IRX2!0.72!4.31!IRX2;;chr6:10415484..10415508,-!p3@TFAP2A!0.72!4.31!TFAP2A;;chr6:1389989..1390019,+!p2@FOXF2!0.72!4.31!FOXF2;;chr2:113994526..113994556,-!p3@PAX8!0.72!4.31!PAX8;;chr2:239756739..239756755,+!p2@TWIST2!0.71!7.48!TWIST2;;chr7:27788205..27788255,+!p2@TAX1BP1!0.71!6.80!TAX1BP1;;chr6:10412477..10412490,-!p10@TFAP2A!0.71!4.08!TFAP2A;;chr13:73633131..73633149,+!p1@KLF5!0.70!48.29!KLF5;;chr8:60031682..60031710,-!p2@TOX!0.69!6.80!TOX;;chr12:54447599..54447630,+!p3@HOXC4!0.69!4.99!HOXC4;;chr18:53068911..53068935,-!p4@TCF4!0.69!4.53!TCF4;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.85!IRX1;;chr20:30193083..30193098,+!p1@ID1!0.68!356.38!ID1;;chr6:19837592..19837621,+!p1@ID4!0.68!26.30!ID4;;chr17:46622114..46622138,-!p4@HOXB2!0.68!6.12!HOXB2;;chr8:72756023..72756055,-!p6@MSC!0.67!4.76!MSC;;chr6:1389824..1389840,+!p3@FOXF2!0.67!3.63!FOXF2;;chr15:80843484..80843499,+!p5@ARNT2!0.67!3.63!ARNT2;;chr12:80084120..80084136,-!p15@PAWR!0.67!3.63!PAWR;;chrY:2803415..2803468,+!p1@ZFY!0.67!3.63!ZFY;;chr16:29818160..29818188,+!p6@MAZ!0.66!19.04!MAZ;;chr8:67525443..67525459,-!p2@MYBL1!0.66!5.67!MYBL1;;chr10:48355030..48355090,+!p1@ZNF488!0.66!4.76!ZNF488;;chr20:32274179..32274213,-!p1@E2F1!0.65!26.75!E2F1;;chr2:239756671..239756732,+!p1@TWIST2!0.65!12.70!TWIST2;;chr1:45805872..45805900,+!p2@TOE1!0.65!9.29!TOE1;;chr17:46622070..46622109,-!p1@HOXB2!0.65!8.61!HOXB2;;chr12:26278008..26278024,-!p4@BHLHE41!0.65!4.31!BHLHE41;;chr12:3068544..3068597,+!p1@TEAD4!0.64!23.80!TEAD4;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.64!3.40!HOXC5;;chr5:3595934..3595957,+!p2@IRX1!0.64!3.40!IRX1;;chr4:299227..299272,-!p1@ZNF732!0.64!3.40!ZNF732;;chr12:2986275..2986363,-!p1@FOXM1!0.63!38.54!FOXM1;;chr6:126240380..126240430,+!p2@NCOA7!0.63!9.52!NCOA7;;chr12:57853565..57853579,+!p1@GLI1!0.62!3.40!GLI1;;chr1:197886461..197886558,+!p1@LHX9!0.62!3.17!LHX9;;chr7:101917407..101917443,+!p3@CUX1!0.62!3.17!CUX1;;chr8:72756380..72756427,-!p8@MSC!0.62!3.17!MSC;;chr12:3069037..3069119,+!p2@TEAD4!0.61!12.24!TEAD4;;chr1:200379104..200379128,-!p2@ZNF281!0.61!8.61!ZNF281;;chr3:25469724..25469773,+!p1@RARB!0.61!4.76!RARB;;chr17:46688334..46688385,-!p1@HOXB7!0.61!4.76!HOXB7;;chr7:27779729..27779819,+!p1@TAX1BP1!0.60!229.20!TAX1BP1;;chr17:41277372..41277418,-!p1@BRCA1!0.60!12.70!BRCA1;;chr15:37392094..37392116,-!p6@MEIS2!0.60!3.85!MEIS2;;chr6:1612300..1612324,+!p3@FOXC1!0.60!2.95!FOXC1;;chr2:176994408..176994492,+!p1@HOXD8!0.60!2.95!HOXD8;;chr12:54447637..54447659,+!p4@HOXC4!0.60!2.95!HOXC4;;chr14:37131058..37131139,+!p1@PAX9!0.60!2.95!PAX9;;chr2:121493425..121493474,+!p1@GLI2!0.59!7.25!GLI2;;chr8:23540441..23540466,-!p1@NKX3-1!0.59!6.57!NKX3-1;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.58!16.10!GLIS2;;chr11:46299539..46299620,+!p2@CREB3L1!0.58!5.21!CREB3L1;;chr3:168865194..168865245,-!p3@MECOM!0.58!3.85!MECOM;;chr12:80084768..80084821,-!p2@PAWR!0.57!23.12!PAWR;;chr1:35656508..35656584,-!p2@SFPQ!0.57!10.20!SFPQ;;chr1:35657108..35657135,-!p5@SFPQ!0.57!5.89!SFPQ;;chr12:80085255..80085284,-!p9@PAWR!0.57!4.31!PAWR;;chr15:80696703..80696754,+!p1@ARNT2!0.57!3.85!ARNT2;;chr15:67418177..67418204,+!p9@SMAD3!0.57!2.72!SMAD3;;chr1:201979703..201979721,+!p2@ELF3!0.57!2.72!ELF3;;chr5:139492456..139492489,+!p7@PURA!0.57!2.72!PURA;;chr11:16627528..16627550,-!p7@SOX6!0.57!2.72!SOX6;;chr3:69915385..69915438,+!p3@MITF!0.57!2.72!MITF;;chr6:21593973..21593988,+!p1@SOX4!0.56!118.57!SOX4;;chr16:1429627..1429662,-!p2@UNKL!0.56!9.07!UNKL;;chr19:20188776..20188826,+!p1@ZNF90!0.56!8.39!ZNF90;;chrX:66763856..66763896,+!p1@AR!0.56!4.08!AR;;chr6:85473156..85473210,-!p2@TBX18!0.56!3.40!TBX18;;chr19:6110474..6110551,-!p1@RFX2!0.55!19.27!RFX2;;chr12:77459306..77459365,-!p1@E2F7!0.54!39.45!E2F7;;chr12:27485785..27485816,+!p1@ARNTL2!0.54!21.31!ARNTL2;;chr8:77593474..77593612,+!p1@ZFHX4!0.54!12.70!ZFHX4;;chr6:20402102..20402152,+!p1@E2F3!0.54!12.47!E2F3;;chr18:19749517..19749531,+!p3@GATA6!0.54!4.99!GATA6;;chr1:221052776..221052799,+!p1@HLX!0.54!4.99!HLX;;chr11:120107344..120107351,+!p1@POU2F3!0.54!3.17!POU2F3;;chr12:54394059..54394088,+!p3@HOXC9!0.54!2.49!HOXC9;;chr7:27142290..27142310,-!p1@HOXA2!0.54!2.49!HOXA2;;chr8:60031934..60031986,-!p6@TOX!0.54!2.49!TOX;;chr2:172950227..172950249,+!p2@DLX1!0.54!2.49!DLX1;;chr6:31126291..31126399,+!p1@TCF19!0.53!29.02!TCF19;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.53!13.60!TAL1;;chr3:12329397..12329433,+!p2@PPARG!0.53!6.35!PPARG;;chr9:99180617..99180658,-!p1@ZNF367!0.53!6.12!ZNF367;;chr2:200323414..200323455,-!p1@SATB2!0.53!5.89!SATB2;;chr11:8102846..8102892,+!p1@TUB!0.53!3.63!TUB;;chr10:8095593..8095625,+!p3@GATA3!0.53!2.95!GATA3;;chr3:114343768..114343822,-!p1@ZBTB20!0.52!12.70!ZBTB20;;chr7:27135591..27135658,-!p1@HOXA1!0.52!5.21!HOXA1;;chr6:45390077..45390105,+!p9@RUNX2!0.52!3.17!RUNX2;;chr1:164528410..164528428,+!p1@PBX1!0.51!21.54!PBX1;;chr21:27107465..27107557,+!p3@GABPA!0.51!10.20!GABPA;;chr12:53625966..53626012,-!p2@RARG!0.51!7.25!RARG;;chr5:158526917..158526932,-!p1@EBF1!0.51!6.80!EBF1;;chr11:12696002..12696022,+!p2@TEAD1!0.51!6.57!TEAD1;;chrX:66763815..66763854,+!p2@AR!0.51!3.17!AR;;chr3:157823517..157823562,-!p1@SHOX2!0.51!2.49!SHOX2;;chr2:172967323..172967336,-!p4@DLX2!0.51!2.27!DLX2;;chr3:138665969..138665993,-!p2@FOXL2!0.51!2.27!FOXL2;;chr4:103423079..103423112,+!p4@NFKB1!0.51!2.27!NFKB1;;chr1:201979743..201979762,+!p1@ELF3!0.51!2.27!ELF3;;chr11:1662926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|ffid_belonging_in_development=CL:0000222
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Line 34: Line 41:
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|name=mesothelioma cell line:Mero-41
|name=mesothelioma cell line:Mero-41
|namespace=FANTOM5
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Line 41: Line 60:
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|rna_box=111
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|rna_catalog_number=
|rna_catalog_number=
Line 56: Line 78:
|rna_weight_ug=83.3526
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|sample_age=60
|sample_age=60
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|sample_cell_line=Mero-41
Line 68: Line 91:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.7161177761244e-254!GO:0043226;organelle;8.02075957116819e-207!GO:0043229;intracellular organelle;2.12503968801645e-206!GO:0043231;intracellular membrane-bound organelle;8.49613941092352e-205!GO:0043227;membrane-bound organelle;8.49613941092352e-205!GO:0005737;cytoplasm;8.3083059609259e-181!GO:0044422;organelle part;1.39964715035472e-153!GO:0044446;intracellular organelle part;8.51081744952469e-152!GO:0044444;cytoplasmic part;1.07786259336739e-125!GO:0032991;macromolecular complex;3.77185807149902e-109!GO:0044237;cellular metabolic process;9.97555730160303e-100!GO:0044238;primary metabolic process;8.05356216744451e-98!GO:0043170;macromolecule metabolic process;1.37561276046954e-94!GO:0030529;ribonucleoprotein complex;2.29460862740629e-93!GO:0005634;nucleus;3.0845049929858e-90!GO:0044428;nuclear part;4.74748606056397e-84!GO:0043233;organelle lumen;1.81420069895508e-80!GO:0031974;membrane-enclosed lumen;1.81420069895508e-80!GO:0005515;protein binding;3.82884187901939e-79!GO:0003723;RNA binding;4.54000598692729e-77!GO:0005739;mitochondrion;2.05945687117332e-63!GO:0019538;protein metabolic process;1.22831688709369e-56!GO:0043234;protein complex;5.22207219305287e-55!GO:0043283;biopolymer metabolic process;1.35785924137899e-54!GO:0005840;ribosome;3.76562092321182e-54!GO:0006396;RNA processing;6.50052026868184e-54!GO:0006412;translation;6.61003502395352e-54!GO:0016043;cellular component organization and biogenesis;3.04007289760444e-52!GO:0031981;nuclear lumen;2.73661432781809e-51!GO:0044260;cellular macromolecule metabolic process;7.35303306285834e-50!GO:0044267;cellular protein metabolic process;9.11238697924289e-50!GO:0031090;organelle membrane;8.21513991808133e-48!GO:0003735;structural constituent of ribosome;1.0344850045458e-47!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.41784378102025e-47!GO:0010467;gene expression;2.05666360532339e-46!GO:0044249;cellular biosynthetic process;3.67946787660002e-43!GO:0033036;macromolecule localization;3.28192585639728e-42!GO:0044429;mitochondrial part;3.91456083583585e-42!GO:0005829;cytosol;7.00969930701786e-42!GO:0015031;protein transport;1.57450493002131e-41!GO:0016071;mRNA metabolic process;1.80178206379317e-40!GO:0009058;biosynthetic process;1.90415661516778e-40!GO:0033279;ribosomal subunit;2.17268612505148e-40!GO:0031967;organelle envelope;5.6669931917225e-40!GO:0009059;macromolecule biosynthetic process;7.32827826763518e-40!GO:0031975;envelope;9.18859435102412e-40!GO:0043228;non-membrane-bound organelle;7.3761079182206e-39!GO:0043232;intracellular non-membrane-bound organelle;7.3761079182206e-39!GO:0008104;protein localization;5.73729047684543e-38!GO:0045184;establishment of protein localization;8.96615651889522e-38!GO:0008380;RNA splicing;3.14613832948022e-37!GO:0046907;intracellular transport;2.09527055516946e-35!GO:0006397;mRNA processing;3.84692845468911e-35!GO:0006996;organelle organization and biogenesis;5.92326993494005e-35!GO:0065003;macromolecular complex assembly;8.85371402550061e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.67069066280022e-34!GO:0006259;DNA metabolic process;4.1491597264172e-34!GO:0022607;cellular component assembly;1.91395589997678e-31!GO:0005654;nucleoplasm;1.27659861395707e-30!GO:0007049;cell cycle;2.21047357450839e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.40295348410583e-29!GO:0006886;intracellular protein transport;2.23576023563373e-28!GO:0000166;nucleotide binding;3.01637585178113e-28!GO:0003676;nucleic acid binding;4.50459129056589e-28!GO:0005681;spliceosome;3.288761267878e-27!GO:0005740;mitochondrial envelope;4.9612024436385e-26!GO:0019866;organelle inner membrane;6.16407489224563e-25!GO:0044451;nucleoplasm part;1.05284362628325e-24!GO:0031966;mitochondrial membrane;4.16901938503268e-24!GO:0044445;cytosolic part;1.08604924692092e-23!GO:0000278;mitotic cell cycle;1.38698990649828e-23!GO:0016462;pyrophosphatase activity;2.68960156199932e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.14701044030463e-23!GO:0017111;nucleoside-triphosphatase activity;6.0256003517083e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;6.56541294679239e-23!GO:0051649;establishment of cellular localization;7.07541353989644e-23!GO:0005743;mitochondrial inner membrane;1.34873438996078e-22!GO:0022402;cell cycle process;2.04384966863159e-22!GO:0051641;cellular localization;2.88797551822349e-22!GO:0006974;response to DNA damage stimulus;3.1329904129484e-22!GO:0005730;nucleolus;5.09243942304181e-22!GO:0015935;small ribosomal subunit;3.18025979617995e-21!GO:0016070;RNA metabolic process;3.61574718460326e-21!GO:0012505;endomembrane system;3.64684386712554e-21!GO:0006119;oxidative phosphorylation;8.67209002139318e-21!GO:0015934;large ribosomal subunit;2.65567381486467e-20!GO:0032553;ribonucleotide binding;2.9010353073903e-20!GO:0032555;purine ribonucleotide binding;2.9010353073903e-20!GO:0016874;ligase activity;4.36983696728752e-20!GO:0006457;protein folding;5.87466736812349e-20!GO:0017076;purine nucleotide binding;1.60741749819048e-19!GO:0022618;protein-RNA complex assembly;4.44275526545935e-19!GO:0031980;mitochondrial lumen;4.56554673311141e-19!GO:0005759;mitochondrial matrix;4.56554673311141e-19!GO:0006512;ubiquitin cycle;2.22096388368527e-18!GO:0005524;ATP binding;2.48705044671639e-18!GO:0006281;DNA repair;3.06309192374187e-18!GO:0032559;adenyl ribonucleotide binding;3.77629544125845e-18!GO:0022403;cell cycle phase;4.18748791191681e-18!GO:0000087;M phase of mitotic cell cycle;4.66396810470984e-18!GO:0007067;mitosis;7.70754885723006e-18!GO:0044455;mitochondrial membrane part;1.11760220084978e-17!GO:0008134;transcription factor binding;1.28087884465157e-17!GO:0005783;endoplasmic reticulum;2.30721544030919e-17!GO:0000502;proteasome complex (sensu Eukaryota);2.3339507676022e-17!GO:0030554;adenyl nucleotide binding;3.41237723607351e-17!GO:0044265;cellular macromolecule catabolic process;3.60751961270673e-17!GO:0043285;biopolymer catabolic process;5.3621000565824e-17!GO:0051301;cell division;6.43409110626269e-17!GO:0005694;chromosome;1.11534989219833e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.2288313665146e-16!GO:0019941;modification-dependent protein catabolic process;1.72713894256774e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.72713894256774e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.81183491265932e-16!GO:0048770;pigment granule;3.46149228027888e-16!GO:0042470;melanosome;3.46149228027888e-16!GO:0044257;cellular protein catabolic process;3.71451744389055e-16!GO:0009719;response to endogenous stimulus;4.20361180169043e-16!GO:0006260;DNA replication;5.42678599015252e-16!GO:0042254;ribosome biogenesis and assembly;1.28170425961587e-15!GO:0005761;mitochondrial ribosome;1.43273290380021e-15!GO:0000313;organellar ribosome;1.43273290380021e-15!GO:0044427;chromosomal part;1.49683166597779e-15!GO:0008135;translation factor activity, nucleic acid binding;1.69199036746955e-15!GO:0009057;macromolecule catabolic process;1.83591955752009e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.03973069886422e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.10690361509464e-15!GO:0051186;cofactor metabolic process;2.66359495899757e-15!GO:0005746;mitochondrial respiratory chain;5.35304380105818e-15!GO:0048193;Golgi vesicle transport;5.82597750755034e-15!GO:0043412;biopolymer modification;6.94477591719319e-15!GO:0000279;M phase;7.03592857510569e-15!GO:0044432;endoplasmic reticulum part;8.56748432401243e-15!GO:0051082;unfolded protein binding;1.09023390214185e-14!GO:0006605;protein targeting;1.74342892371528e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.75418094628309e-14!GO:0003954;NADH dehydrogenase activity;1.75418094628309e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.75418094628309e-14!GO:0030163;protein catabolic process;1.77390968375825e-14!GO:0044453;nuclear membrane part;2.86972180592995e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.24445891268992e-14!GO:0005635;nuclear envelope;3.30648848958815e-14!GO:0016887;ATPase activity;6.32558006600751e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;6.83527877460166e-14!GO:0000375;RNA splicing, via transesterification reactions;6.83527877460166e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.83527877460166e-14!GO:0042623;ATPase activity, coupled;1.18442423319186e-13!GO:0031965;nuclear membrane;1.58806254717809e-13!GO:0044248;cellular catabolic process;2.46833995197266e-13!GO:0005794;Golgi apparatus;3.56770149320986e-13!GO:0006464;protein modification process;4.77614129194329e-13!GO:0003743;translation initiation factor activity;7.58306754317336e-13!GO:0051276;chromosome organization and biogenesis;1.19167271897109e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.38771673894954e-12!GO:0042773;ATP synthesis coupled electron transport;1.38771673894954e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.53105345013453e-12!GO:0045271;respiratory chain complex I;1.53105345013453e-12!GO:0005747;mitochondrial respiratory chain complex I;1.53105345013453e-12!GO:0006399;tRNA metabolic process;1.57621237259631e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.08128614522226e-12!GO:0003712;transcription cofactor activity;4.28272624498745e-12!GO:0006413;translational initiation;5.70821463423127e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.24096195760568e-12!GO:0016192;vesicle-mediated transport;1.16834884122215e-11!GO:0043687;post-translational protein modification;1.18932207771702e-11!GO:0006732;coenzyme metabolic process;1.82219279483106e-11!GO:0009055;electron carrier activity;2.22519019683838e-11!GO:0005643;nuclear pore;2.22519019683838e-11!GO:0006913;nucleocytoplasmic transport;2.54851280723453e-11!GO:0012501;programmed cell death;2.80271127193212e-11!GO:0006461;protein complex assembly;3.01239057607245e-11!GO:0016604;nuclear body;4.22996593569353e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.59983609563694e-11!GO:0006366;transcription from RNA polymerase II promoter;5.79102819796869e-11!GO:0006915;apoptosis;5.87199566760584e-11!GO:0051169;nuclear transport;6.42565072646996e-11!GO:0051726;regulation of cell cycle;1.05738626554289e-10!GO:0000074;regulation of progression through cell cycle;1.21972326844603e-10!GO:0004386;helicase activity;1.46696987481683e-10!GO:0006403;RNA localization;1.52067660788372e-10!GO:0050657;nucleic acid transport;2.09406629361835e-10!GO:0051236;establishment of RNA localization;2.09406629361835e-10!GO:0050658;RNA transport;2.09406629361835e-10!GO:0005789;endoplasmic reticulum membrane;2.16498260437444e-10!GO:0009259;ribonucleotide metabolic process;2.56769596173931e-10!GO:0006364;rRNA processing;3.43660574082792e-10!GO:0008219;cell death;3.97935847737283e-10!GO:0016265;death;3.97935847737283e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.0737923170315e-10!GO:0006446;regulation of translational initiation;4.7212096358814e-10!GO:0008639;small protein conjugating enzyme activity;5.20236337886806e-10!GO:0065002;intracellular protein transport across a membrane;5.85824468669798e-10!GO:0016072;rRNA metabolic process;7.59567838927475e-10!GO:0046930;pore complex;9.80637331196248e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;9.81649422657537e-10!GO:0008026;ATP-dependent helicase activity;1.1729650292546e-09!GO:0004842;ubiquitin-protein ligase activity;1.39183033971384e-09!GO:0006163;purine nucleotide metabolic process;1.60769602439864e-09!GO:0050794;regulation of cellular process;1.75791197948774e-09!GO:0009260;ribonucleotide biosynthetic process;2.27593024986963e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.70462466188572e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.70462466188572e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.70462466188572e-09!GO:0019787;small conjugating protein ligase activity;2.70462466188572e-09!GO:0006323;DNA packaging;2.83298587800553e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.56071364574227e-09!GO:0008565;protein transporter activity;4.24593708951555e-09!GO:0009150;purine ribonucleotide metabolic process;4.48458257300349e-09!GO:0006164;purine nucleotide biosynthetic process;5.4137208203579e-09!GO:0016607;nuclear speck;5.98352893736329e-09!GO:0043038;amino acid activation;7.0610072478656e-09!GO:0006418;tRNA aminoacylation for protein translation;7.0610072478656e-09!GO:0043039;tRNA aminoacylation;7.0610072478656e-09!GO:0016881;acid-amino acid ligase activity;7.87453733800311e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.40454517832696e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.49268688987642e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.56537418272647e-08!GO:0015630;microtubule cytoskeleton;1.59396677358178e-08!GO:0003697;single-stranded DNA binding;1.60948097664887e-08!GO:0009141;nucleoside triphosphate metabolic process;1.81136026590163e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.01512568389399e-08!GO:0030120;vesicle coat;2.17527922482844e-08!GO:0030662;coated vesicle membrane;2.17527922482844e-08!GO:0051028;mRNA transport;2.28063983286941e-08!GO:0048523;negative regulation of cellular process;3.28020619527667e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.29282194741704e-08!GO:0009144;purine nucleoside triphosphate metabolic process;3.29282194741704e-08!GO:0065004;protein-DNA complex assembly;3.45815802758419e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.45815802758419e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.45815802758419e-08!GO:0051188;cofactor biosynthetic process;3.50021805075685e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.74927791659314e-08!GO:0005793;ER-Golgi intermediate compartment;3.74982196079161e-08!GO:0000785;chromatin;3.94851635518815e-08!GO:0005667;transcription factor complex;4.01508420565355e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.36129799245144e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.53364431192015e-08!GO:0016779;nucleotidyltransferase activity;6.60730746550519e-08!GO:0009060;aerobic respiration;7.14961027816657e-08!GO:0007005;mitochondrion organization and biogenesis;7.27251304919909e-08!GO:0051246;regulation of protein metabolic process;7.38875172251313e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.40144704545867e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.40144704545867e-08!GO:0006333;chromatin assembly or disassembly;9.06469139618863e-08!GO:0043067;regulation of programmed cell death;1.08829506638413e-07!GO:0048475;coated membrane;1.09018099281937e-07!GO:0030117;membrane coat;1.09018099281937e-07!GO:0015986;ATP synthesis coupled proton transport;1.09018099281937e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.09018099281937e-07!GO:0016740;transferase activity;1.25257963436126e-07!GO:0043566;structure-specific DNA binding;1.30595158644312e-07!GO:0042981;regulation of apoptosis;1.6615549585766e-07!GO:0009056;catabolic process;1.68319457380807e-07!GO:0017038;protein import;1.82398902414524e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.99910554455938e-07!GO:0019829;cation-transporting ATPase activity;2.05687837419854e-07!GO:0032446;protein modification by small protein conjugation;2.06564321198653e-07!GO:0005819;spindle;2.69907548239272e-07!GO:0016567;protein ubiquitination;2.77794123146999e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.47175550871003e-07!GO:0005768;endosome;3.96864216028122e-07!GO:0000775;chromosome, pericentric region;4.75073675555643e-07!GO:0046034;ATP metabolic process;5.65658616361634e-07!GO:0000245;spliceosome assembly;6.09659651353346e-07!GO:0009117;nucleotide metabolic process;6.74845205653046e-07!GO:0003924;GTPase activity;7.14383016961097e-07!GO:0006261;DNA-dependent DNA replication;8.7686260525188e-07!GO:0045333;cellular respiration;8.91677879861646e-07!GO:0004298;threonine endopeptidase activity;1.03052627855525e-06!GO:0048519;negative regulation of biological process;1.09342808622974e-06!GO:0043069;negative regulation of programmed cell death;1.10590889003148e-06!GO:0051329;interphase of mitotic cell cycle;1.18556908992171e-06!GO:0006754;ATP biosynthetic process;1.31985882544419e-06!GO:0006753;nucleoside phosphate metabolic process;1.31985882544419e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.31985882544419e-06!GO:0051325;interphase;1.67621734534203e-06!GO:0009108;coenzyme biosynthetic process;1.83824543580142e-06!GO:0043623;cellular protein complex assembly;1.87107822533296e-06!GO:0003714;transcription corepressor activity;2.42432591473614e-06!GO:0016491;oxidoreductase activity;2.55618014081221e-06!GO:0005788;endoplasmic reticulum lumen;2.55618014081221e-06!GO:0006099;tricarboxylic acid cycle;2.63099986352065e-06!GO:0046356;acetyl-CoA catabolic process;2.63099986352065e-06!GO:0016787;hydrolase activity;2.69196694081252e-06!GO:0043066;negative regulation of apoptosis;3.0897046900275e-06!GO:0016564;transcription repressor activity;3.2768800537724e-06!GO:0003899;DNA-directed RNA polymerase activity;3.58423908995825e-06!GO:0050789;regulation of biological process;3.70664850335155e-06!GO:0006793;phosphorus metabolic process;3.76711793662195e-06!GO:0006796;phosphate metabolic process;3.76711793662195e-06!GO:0051168;nuclear export;4.19863607007037e-06!GO:0016310;phosphorylation;4.69657857201768e-06!GO:0051187;cofactor catabolic process;4.77295088419511e-06!GO:0005657;replication fork;4.865451213349e-06!GO:0006916;anti-apoptosis;5.48463411261791e-06!GO:0016563;transcription activator activity;5.78890880079514e-06!GO:0006084;acetyl-CoA metabolic process;5.84113063053473e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.87572621311006e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.06136668916409e-06!GO:0045454;cell redox homeostasis;6.64047313239349e-06!GO:0016568;chromatin modification;6.64047313239349e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.82699410548993e-06!GO:0003713;transcription coactivator activity;7.97265886439355e-06!GO:0015078;hydrogen ion transmembrane transporter activity;8.09430669093112e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.51586616727071e-06!GO:0016853;isomerase activity;9.25308828074384e-06!GO:0003724;RNA helicase activity;1.06928342899843e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.16350752830921e-05!GO:0045259;proton-transporting ATP synthase complex;1.18209345901227e-05!GO:0006613;cotranslational protein targeting to membrane;1.20747001966844e-05!GO:0005798;Golgi-associated vesicle;1.2612315214938e-05!GO:0000151;ubiquitin ligase complex;1.31643925688576e-05!GO:0005762;mitochondrial large ribosomal subunit;1.40896150808257e-05!GO:0000315;organellar large ribosomal subunit;1.40896150808257e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.42540140689564e-05!GO:0007051;spindle organization and biogenesis;1.42540140689564e-05!GO:0031324;negative regulation of cellular metabolic process;1.4877700743931e-05!GO:0044431;Golgi apparatus part;1.51539100917826e-05!GO:0051170;nuclear import;1.5833495577589e-05!GO:0006752;group transfer coenzyme metabolic process;1.78926836976715e-05!GO:0008094;DNA-dependent ATPase activity;1.89923326596601e-05!GO:0009109;coenzyme catabolic process;1.92134102979466e-05!GO:0006334;nucleosome assembly;2.09703764501508e-05!GO:0019222;regulation of metabolic process;2.25294635787933e-05!GO:0000075;cell cycle checkpoint;2.38680512686513e-05!GO:0005769;early endosome;2.66520979801954e-05!GO:0044452;nucleolar part;2.85145449557537e-05!GO:0031252;leading edge;3.0588669369247e-05!GO:0006612;protein targeting to membrane;3.34902741848197e-05!GO:0006091;generation of precursor metabolites and energy;3.56613242929239e-05!GO:0005813;centrosome;3.92946772594692e-05!GO:0031497;chromatin assembly;4.14318855228532e-05!GO:0043021;ribonucleoprotein binding;4.20384549421987e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.30025723673845e-05!GO:0006606;protein import into nucleus;4.5362986669842e-05!GO:0031988;membrane-bound vesicle;4.93826185310076e-05!GO:0019843;rRNA binding;5.09468827317047e-05!GO:0003682;chromatin binding;5.60490786675209e-05!GO:0008033;tRNA processing;5.7264617085015e-05!GO:0051427;hormone receptor binding;5.91757082246135e-05!GO:0016859;cis-trans isomerase activity;6.16316707660263e-05!GO:0005815;microtubule organizing center;6.16316707660263e-05!GO:0000314;organellar small ribosomal subunit;6.1703169089406e-05!GO:0005763;mitochondrial small ribosomal subunit;6.1703169089406e-05!GO:0016023;cytoplasmic membrane-bound vesicle;6.49373811824809e-05!GO:0007010;cytoskeleton organization and biogenesis;6.93532147053541e-05!GO:0003684;damaged DNA binding;6.99126661047996e-05!GO:0048522;positive regulation of cellular process;7.18481840311956e-05!GO:0030867;rough endoplasmic reticulum membrane;7.34801320449322e-05!GO:0006302;double-strand break repair;7.6945642059861e-05!GO:0044440;endosomal part;8.50178962841255e-05!GO:0010008;endosome membrane;8.50178962841255e-05!GO:0009892;negative regulation of metabolic process;0.000103245853514805!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000110264948093379!GO:0005773;vacuole;0.000123768776560177!GO:0035257;nuclear hormone receptor binding;0.000129568856839607!GO:0051789;response to protein stimulus;0.000130090363904979!GO:0006986;response to unfolded protein;0.000130090363904979!GO:0003729;mRNA binding;0.000133228256958563!GO:0005525;GTP binding;0.000146808266249983!GO:0051052;regulation of DNA metabolic process;0.000155160522016143!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000161479761849273!GO:0016363;nuclear matrix;0.00016396076307878!GO:0005048;signal sequence binding;0.000187086788861968!GO:0000139;Golgi membrane;0.000199291079690348!GO:0000776;kinetochore;0.000204771629704686!GO:0006626;protein targeting to mitochondrion;0.000226687278253266!GO:0019899;enzyme binding;0.000238253991471814!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000257544837984372!GO:0008186;RNA-dependent ATPase activity;0.00027647318667369!GO:0007243;protein kinase cascade;0.000283604102138857!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000285335012987978!GO:0015399;primary active transmembrane transporter activity;0.000285335012987978!GO:0008654;phospholipid biosynthetic process;0.000288794333294204!GO:0030663;COPI coated vesicle membrane;0.000289911793620721!GO:0030126;COPI vesicle coat;0.000289911793620721!GO:0005885;Arp2/3 protein complex;0.00029282189178414!GO:0006383;transcription from RNA polymerase III promoter;0.00032483227390243!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000325934695701756!GO:0031982;vesicle;0.000348576975887728!GO:0045786;negative regulation of progression through cell cycle;0.000388407226130591!GO:0031968;organelle outer membrane;0.000428381436897349!GO:0006414;translational elongation;0.000452517024363131!GO:0005905;coated pit;0.000454813814683879!GO:0003690;double-stranded DNA binding;0.000472309374924694!GO:0005770;late endosome;0.000482252210074435!GO:0031410;cytoplasmic vesicle;0.000495331850347102!GO:0030133;transport vesicle;0.000503104902913592!GO:0015980;energy derivation by oxidation of organic compounds;0.000507660727216325!GO:0006891;intra-Golgi vesicle-mediated transport;0.000538339279137353!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000541020551063735!GO:0033116;ER-Golgi intermediate compartment membrane;0.000581797847586259!GO:0008250;oligosaccharyl transferase complex;0.000593370706167379!GO:0019867;outer membrane;0.000604128982319262!GO:0048471;perinuclear region of cytoplasm;0.000663457291555524!GO:0030137;COPI-coated vesicle;0.000667515598245888!GO:0007088;regulation of mitosis;0.00067843128844707!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00068637616278715!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000709171864329909!GO:0009165;nucleotide biosynthetic process;0.000732839310502471!GO:0006405;RNA export from nucleus;0.00076187960580543!GO:0000082;G1/S transition of mitotic cell cycle;0.00076187960580543!GO:0004576;oligosaccharyl transferase activity;0.00076187960580543!GO:0004004;ATP-dependent RNA helicase activity;0.000770544076977552!GO:0043681;protein import into mitochondrion;0.000805252346603732!GO:0016197;endosome transport;0.000814267693389934!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000857135473564746!GO:0032561;guanyl ribonucleotide binding;0.000892472930049925!GO:0019001;guanyl nucleotide binding;0.000892472930049925!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00090367090523436!GO:0051920;peroxiredoxin activity;0.000925672170772296!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000935099553530118!GO:0030036;actin cytoskeleton organization and biogenesis;0.000937014831069485!GO:0007093;mitotic cell cycle checkpoint;0.00094982549543447!GO:0000323;lytic vacuole;0.000955099244495738!GO:0005764;lysosome;0.000955099244495738!GO:0030659;cytoplasmic vesicle membrane;0.000976918380692189!GO:0004674;protein serine/threonine kinase activity;0.000983667327994058!GO:0006402;mRNA catabolic process;0.000991524310144376!GO:0031072;heat shock protein binding;0.00100292311360174!GO:0005874;microtubule;0.00101911189089539!GO:0030880;RNA polymerase complex;0.00102967826295695!GO:0008361;regulation of cell size;0.00104621686212808!GO:0051252;regulation of RNA metabolic process;0.00111387569604167!GO:0030132;clathrin coat of coated pit;0.00114858033307618!GO:0016049;cell growth;0.00115738082147!GO:0000059;protein import into nucleus, docking;0.00123911588341937!GO:0042802;identical protein binding;0.0012478752462724!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00128776796085995!GO:0046483;heterocycle metabolic process;0.00137824081276534!GO:0006275;regulation of DNA replication;0.00141984305420199!GO:0006839;mitochondrial transport;0.00147228136222952!GO:0016481;negative regulation of transcription;0.00158333732600027!GO:0031323;regulation of cellular metabolic process;0.00160435604709435!GO:0007059;chromosome segregation;0.00160682026572411!GO:0006401;RNA catabolic process;0.0016458059200734!GO:0005741;mitochondrial outer membrane;0.00173097855712615!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00173279209527848!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00173279209527848!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00173279209527848!GO:0018196;peptidyl-asparagine modification;0.00180197374526831!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00180197374526831!GO:0006310;DNA recombination;0.00181780795556871!GO:0043284;biopolymer biosynthetic process;0.00189973667000666!GO:0003678;DNA helicase activity;0.0019539438915348!GO:0005637;nuclear inner membrane;0.00197593261097513!GO:0030658;transport vesicle membrane;0.00203657681903797!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00219836294373933!GO:0000428;DNA-directed RNA polymerase complex;0.00219836294373933!GO:0008092;cytoskeletal protein binding;0.00222324008453103!GO:0006950;response to stress;0.00230405782423847!GO:0001558;regulation of cell growth;0.00231107092086917!GO:0044433;cytoplasmic vesicle part;0.00243625668294946!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00254407224283356!GO:0046474;glycerophospholipid biosynthetic process;0.0026479634494332!GO:0048500;signal recognition particle;0.0026691474801432!GO:0007052;mitotic spindle organization and biogenesis;0.00271943628932917!GO:0006611;protein export from nucleus;0.00283968400796564!GO:0005684;U2-dependent spliceosome;0.00295426383246403!GO:0008139;nuclear localization sequence binding;0.00298403986720287!GO:0043492;ATPase activity, coupled to movement of substances;0.00301322597066078!GO:0015631;tubulin binding;0.00305710259469591!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00306873355874345!GO:0065009;regulation of a molecular function;0.00321822535071827!GO:0046489;phosphoinositide biosynthetic process;0.00324541599718977!GO:0008632;apoptotic program;0.00342866410407457!GO:0048518;positive regulation of biological process;0.00342866410407457!GO:0012506;vesicle membrane;0.00355341449358555!GO:0000049;tRNA binding;0.00363668164806531!GO:0001726;ruffle;0.00363736004005793!GO:0006352;transcription initiation;0.0036652105788112!GO:0019752;carboxylic acid metabolic process;0.00397316954305237!GO:0065007;biological regulation;0.00397316954305237!GO:0006520;amino acid metabolic process;0.00400562642329408!GO:0008312;7S RNA binding;0.00404498295211833!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00421445721386177!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00433221838542017!GO:0030118;clathrin coat;0.00447110117261918!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00450887512021945!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00470279969208122!GO:0030134;ER to Golgi transport vesicle;0.00480734995973575!GO:0045941;positive regulation of transcription;0.00481124152517914!GO:0007006;mitochondrial membrane organization and biogenesis;0.00481734375362766!GO:0006082;organic acid metabolic process;0.00485429914660174!GO:0006350;transcription;0.00486725875958863!GO:0051087;chaperone binding;0.00488945366978447!GO:0007017;microtubule-based process;0.0050737254809147!GO:0016272;prefoldin complex;0.00513506896937402!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00519243361093491!GO:0006740;NADPH regeneration;0.00578483457843971!GO:0006098;pentose-phosphate shunt;0.00578483457843971!GO:0030660;Golgi-associated vesicle membrane;0.00581071850780819!GO:0051540;metal cluster binding;0.00592405286607216!GO:0051536;iron-sulfur cluster binding;0.00592405286607216!GO:0030029;actin filament-based process;0.00595547161235133!GO:0017166;vinculin binding;0.0060529713767425!GO:0045893;positive regulation of transcription, DNA-dependent;0.00623105810495097!GO:0048487;beta-tubulin binding;0.00624963793229244!GO:0006284;base-excision repair;0.00632433789129466!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00652550236140954!GO:0045047;protein targeting to ER;0.00652550236140954!GO:0043488;regulation of mRNA stability;0.00652550236140954!GO:0043487;regulation of RNA stability;0.00652550236140954!GO:0032984;macromolecular complex disassembly;0.00666858156242199!GO:0005791;rough endoplasmic reticulum;0.00666858156242199!GO:0016301;kinase activity;0.00684543111082543!GO:0050662;coenzyme binding;0.00696544480426042!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00699682670718016!GO:0030521;androgen receptor signaling pathway;0.00706797668462616!GO:0044262;cellular carbohydrate metabolic process;0.00708470591231935!GO:0030127;COPII vesicle coat;0.00733053142719925!GO:0012507;ER to Golgi transport vesicle membrane;0.00733053142719925!GO:0003702;RNA polymerase II transcription factor activity;0.007421473801248!GO:0006595;polyamine metabolic process;0.0074997533533612!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00752434012391909!GO:0035258;steroid hormone receptor binding;0.00752906186579505!GO:0006289;nucleotide-excision repair;0.00808658404509717!GO:0043596;nuclear replication fork;0.00812960677823073!GO:0009112;nucleobase metabolic process;0.00834071864569771!GO:0042770;DNA damage response, signal transduction;0.00867195352162839!GO:0030027;lamellipodium;0.00881865113784376!GO:0009116;nucleoside metabolic process;0.00886888061849598!GO:0000209;protein polyubiquitination;0.00908634785142889!GO:0006778;porphyrin metabolic process;0.00908634785142889!GO:0033013;tetrapyrrole metabolic process;0.00908634785142889!GO:0043624;cellular protein complex disassembly;0.00909668206341664!GO:0051287;NAD binding;0.00911898049061307!GO:0051539;4 iron, 4 sulfur cluster binding;0.00920431860589111!GO:0005862;muscle thin filament tropomyosin;0.00929113904963293!GO:0000725;recombinational repair;0.00929113904963293!GO:0000724;double-strand break repair via homologous recombination;0.00929113904963293!GO:0008629;induction of apoptosis by intracellular signals;0.00936450620210042!GO:0000096;sulfur amino acid metabolic process;0.00957055874100312!GO:0009451;RNA modification;0.0096904247650029!GO:0003711;transcription elongation regulator activity;0.00969284762384068!GO:0007346;regulation of progression through mitotic cell cycle;0.00969284762384068!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00971962354571551!GO:0006509;membrane protein ectodomain proteolysis;0.0097738038239419!GO:0033619;membrane protein proteolysis;0.0097738038239419!GO:0045045;secretory pathway;0.00995201210750113!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0100396034851748!GO:0030176;integral to endoplasmic reticulum membrane;0.01006858272545!GO:0006892;post-Golgi vesicle-mediated transport;0.010288427439903!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0106023677962769!GO:0006144;purine base metabolic process;0.0106085624399444!GO:0016044;membrane organization and biogenesis;0.0106411420412377!GO:0008180;signalosome;0.0109408397499805!GO:0043241;protein complex disassembly;0.0110082079388912!GO:0004527;exonuclease activity;0.0112420677063178!GO:0006818;hydrogen transport;0.0116926530380855!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0117138036467437!GO:0043022;ribosome binding;0.0120262251273418!GO:0008022;protein C-terminus binding;0.012119513226752!GO:0005832;chaperonin-containing T-complex;0.0123089564812069!GO:0030125;clathrin vesicle coat;0.0127133762803263!GO:0030665;clathrin coated vesicle membrane;0.0127133762803263!GO:0008234;cysteine-type peptidase activity;0.0127182899801246!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0129909481657658!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0129909481657658!GO:0005876;spindle microtubule;0.0131087867058166!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0132826439098972!GO:0016251;general RNA polymerase II transcription factor activity;0.0133048414717343!GO:0048468;cell development;0.0133048414717343!GO:0006376;mRNA splice site selection;0.0134680201321557!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0134680201321557!GO:0031124;mRNA 3'-end processing;0.0136385430170379!GO:0006417;regulation of translation;0.013810893498405!GO:0000922;spindle pole;0.0142020171839151!GO:0015992;proton transport;0.0143995337592017!GO:0032508;DNA duplex unwinding;0.0147222242623688!GO:0032392;DNA geometric change;0.0147222242623688!GO:0006220;pyrimidine nucleotide metabolic process;0.0148401307188451!GO:0006497;protein amino acid lipidation;0.0149956675674851!GO:0006519;amino acid and derivative metabolic process;0.0149956675674851!GO:0006270;DNA replication initiation;0.0149989671193077!GO:0031901;early endosome membrane;0.0159685648321475!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.016160866408948!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0162146613396078!GO:0009303;rRNA transcription;0.0170963353923454!GO:0008168;methyltransferase activity;0.0177275095844101!GO:0046426;negative regulation of JAK-STAT cascade;0.0177963817929207!GO:0006739;NADP metabolic process;0.0178367615455619!GO:0042168;heme metabolic process;0.0178873721634283!GO:0051128;regulation of cellular component organization and biogenesis;0.0179453185881236!GO:0007021;tubulin folding;0.018351701373734!GO:0035267;NuA4 histone acetyltransferase complex;0.0183685637398245!GO:0016741;transferase activity, transferring one-carbon groups;0.0185589430017084!GO:0004518;nuclease activity;0.0187764082050133!GO:0000339;RNA cap binding;0.0188017056662513!GO:0006672;ceramide metabolic process;0.0188237717772041!GO:0006400;tRNA modification;0.0194057890257775!GO:0031529;ruffle organization and biogenesis;0.0194534407504149!GO:0004177;aminopeptidase activity;0.0195472757826541!GO:0004003;ATP-dependent DNA helicase activity;0.0198253745790655!GO:0006807;nitrogen compound metabolic process;0.0205896972016289!GO:0008637;apoptotic mitochondrial changes;0.020844099382181!GO:0043433;negative regulation of transcription factor activity;0.020941163367963!GO:0006506;GPI anchor biosynthetic process;0.0209961973610903!GO:0005758;mitochondrial intermembrane space;0.0210753290274762!GO:0030384;phosphoinositide metabolic process;0.0216955163410679!GO:0031570;DNA integrity checkpoint;0.022066266324736!GO:0030119;AP-type membrane coat adaptor complex;0.0223743516793056!GO:0006118;electron transport;0.0227107771740379!GO:0006378;mRNA polyadenylation;0.0230135986795259!GO:0033239;negative regulation of amine metabolic process;0.0238751082612786!GO:0045763;negative regulation of amino acid metabolic process;0.0238751082612786!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0238751082612786!GO:0046966;thyroid hormone receptor binding;0.0240065502673964!GO:0006650;glycerophospholipid metabolic process;0.024188305722326!GO:0006268;DNA unwinding during replication;0.024600490575107!GO:0046519;sphingoid metabolic process;0.0257406331144971!GO:0000287;magnesium ion binding;0.0258120464452667!GO:0005663;DNA replication factor C complex;0.0261368013838166!GO:0008601;protein phosphatase type 2A regulator activity;0.0261368013838166!GO:0009308;amine metabolic process;0.0266920283012712!GO:0008017;microtubule binding;0.0268703639241372!GO:0050681;androgen receptor binding;0.0270309858021508!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0274675241169583!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0276889604303875!GO:0045892;negative regulation of transcription, DNA-dependent;0.0277713761230574!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0281133336796502!GO:0005869;dynactin complex;0.0282685386341902!GO:0010468;regulation of gene expression;0.0283154935465402!GO:0043065;positive regulation of apoptosis;0.0284015142048576!GO:0046467;membrane lipid biosynthetic process;0.0290199934445939!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0292380282781019!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0295645627704711!GO:0043189;H4/H2A histone acetyltransferase complex;0.0295721551752778!GO:0032906;transforming growth factor-beta2 production;0.0297718443478161!GO:0032909;regulation of transforming growth factor-beta2 production;0.0297718443478161!GO:0006518;peptide metabolic process;0.0300106263046896!GO:0005732;small nucleolar ribonucleoprotein complex;0.0302361035972247!GO:0051101;regulation of DNA binding;0.0303979670294534!GO:0000910;cytokinesis;0.030431748903511!GO:0006505;GPI anchor metabolic process;0.0304780592115643!GO:0000228;nuclear chromosome;0.0306454624520267!GO:0006979;response to oxidative stress;0.0307398892974694!GO:0001666;response to hypoxia;0.0307398892974694!GO:0043068;positive regulation of programmed cell death;0.0307586697285282!GO:0000786;nucleosome;0.0310469755282365!GO:0042393;histone binding;0.0310830823449219!GO:0030503;regulation of cell redox homeostasis;0.0313685845019289!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0316562655838014!GO:0031970;organelle envelope lumen;0.0316562655838014!GO:0004197;cysteine-type endopeptidase activity;0.0324452600257072!GO:0008652;amino acid biosynthetic process;0.0332350885127752!GO:0003756;protein disulfide isomerase activity;0.0332350885127752!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0332350885127752!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0332350885127752!GO:0010257;NADH dehydrogenase complex assembly;0.0332350885127752!GO:0033108;mitochondrial respiratory chain complex assembly;0.0332350885127752!GO:0003746;translation elongation factor activity;0.0334328904751468!GO:0008047;enzyme activator activity;0.0334916929173482!GO:0045792;negative regulation of cell size;0.0334916929173482!GO:0051053;negative regulation of DNA metabolic process;0.0337199828054082!GO:0006779;porphyrin biosynthetic process;0.0337199828054082!GO:0033014;tetrapyrrole biosynthetic process;0.0337199828054082!GO:0016860;intramolecular oxidoreductase activity;0.0340834732815511!GO:0046822;regulation of nucleocytoplasmic transport;0.0346382522798166!GO:0008538;proteasome activator activity;0.0349696402898884!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0349772353255694!GO:0004532;exoribonuclease activity;0.0349772353255694!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0349772353255694!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0352736731685239!GO:0033673;negative regulation of kinase activity;0.0356389224751784!GO:0006469;negative regulation of protein kinase activity;0.0356389224751784!GO:0030131;clathrin adaptor complex;0.0356991797678075!GO:0031123;RNA 3'-end processing;0.0356991797678075!GO:0043601;nuclear replisome;0.0356991797678075!GO:0030894;replisome;0.0356991797678075!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0356991797678075!GO:0006984;ER-nuclear signaling pathway;0.0357093864590996!GO:0022411;cellular component disassembly;0.0358123838544374!GO:0007034;vacuolar transport;0.0359739324499561!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0365301913579878!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0365301913579878!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0365301913579878!GO:0000123;histone acetyltransferase complex;0.0371609101261115!GO:0043256;laminin complex;0.0371865942522667!GO:0035035;histone acetyltransferase binding;0.037668574633677!GO:0019887;protein kinase regulator activity;0.037668574633677!GO:0030518;steroid hormone receptor signaling pathway;0.0378718122246812!GO:0042158;lipoprotein biosynthetic process;0.0379162684680695!GO:0006338;chromatin remodeling;0.0382081102025041!GO:0031326;regulation of cellular biosynthetic process;0.0384011240515892!GO:0005784;translocon complex;0.0386410638606311!GO:0046982;protein heterodimerization activity;0.0389678055332569!GO:0000070;mitotic sister chromatid segregation;0.0393081584582491!GO:0030308;negative regulation of cell growth;0.0395247815912313!GO:0006767;water-soluble vitamin metabolic process;0.0397538253185231!GO:0047485;protein N-terminus binding;0.0397630541430356!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0398931544932927!GO:0031371;ubiquitin conjugating enzyme complex;0.0401803094854147!GO:0000819;sister chromatid segregation;0.040184905800665!GO:0040008;regulation of growth;0.040294473122516!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0409455337868181!GO:0015002;heme-copper terminal oxidase activity;0.0409455337868181!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0409455337868181!GO:0004129;cytochrome-c oxidase activity;0.0409455337868181!GO:0006360;transcription from RNA polymerase I promoter;0.0413913201944735!GO:0008287;protein serine/threonine phosphatase complex;0.0414299463469311!GO:0022890;inorganic cation transmembrane transporter activity;0.0424136456140242!GO:0000178;exosome (RNase complex);0.042453672178328!GO:0051098;regulation of binding;0.0429205749034871!GO:0005669;transcription factor TFIID complex;0.0429246368914277!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0432454911044583!GO:0050790;regulation of catalytic activity;0.0433662324277879!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0437066405908702!GO:0030508;thiol-disulfide exchange intermediate activity;0.0438692106875251!GO:0000159;protein phosphatase type 2A complex;0.0438692106875251!GO:0030911;TPR domain binding;0.043890413887761!GO:0007050;cell cycle arrest;0.0441040933796503!GO:0006406;mRNA export from nucleus;0.0441040933796503!GO:0051348;negative regulation of transferase activity;0.0443917862093522!GO:0000781;chromosome, telomeric region;0.0450726997902395!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0450726997902395!GO:0009889;regulation of biosynthetic process;0.0456924092154634!GO:0008408;3'-5' exonuclease activity;0.0456924092154634!GO:0007040;lysosome organization and biogenesis;0.0457123071990988!GO:0048037;cofactor binding;0.04612900012527!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0468235228410049!GO:0043130;ubiquitin binding;0.0479059254454477!GO:0032182;small conjugating protein binding;0.0479059254454477!GO:0007030;Golgi organization and biogenesis;0.047926626577625!GO:0000152;nuclear ubiquitin ligase complex;0.0480123041340891!GO:0009225;nucleotide-sugar metabolic process;0.0482064722018175!GO:0006541;glutamine metabolic process;0.0484063537118035!GO:0003923;GPI-anchor transamidase activity;0.048921933177326!GO:0016255;attachment of GPI anchor to protein;0.048921933177326!GO:0042765;GPI-anchor transamidase complex;0.048921933177326!GO:0016408;C-acyltransferase activity;0.0492319749267631!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0492319749267631!GO:0000118;histone deacetylase complex;0.0494957762554349!GO:0051881;regulation of mitochondrial membrane potential;0.0494957762554349!GO:0043154;negative regulation of caspase activity;0.0496962566038338!GO:0006354;RNA elongation;0.0497396363057629!GO:0031902;late endosome membrane;0.0499298284479517
|sample_id=10851
|sample_id=10851
|sample_note=
|sample_note=
Line 75: Line 99:
|sample_tissue=mesothelium
|sample_tissue=mesothelium
|top_motifs=NR3C1:1.92360010564;AIRE:1.27048358446;ADNP_IRX_SIX_ZHX:1.25150724299;POU1F1:1.2175170462;HSF1,2:1.16262435032;E2F1..5:0.94021099716;UFEwm:0.939558351937;NKX3-2:0.925221294027;ZBTB16:0.879644447359;NKX3-1:0.85957597076;TEAD1:0.857223404674;PAX8:0.811767777907;TEF:0.795581584595;EVI1:0.777160841576;ONECUT1,2:0.74928807743;FOXA2:0.697723783923;ZNF384:0.688845949687;MYB:0.682921717174;NFE2L2:0.682507100736;T:0.660692861157;TAL1_TCF{3,4,12}:0.660595387752;HAND1,2:0.658953315255;NFE2L1:0.647960540507;TLX1..3_NFIC{dimer}:0.640746896512;TFDP1:0.631854812911;PAX6:0.563736337955;HMGA1,2:0.53761801865;NKX2-2,8:0.528326971964;HMX1:0.527895289579;ALX4:0.46091904169;TBX4,5:0.455182834768;RFX1:0.4362750417;STAT5{A,B}:0.436190140734;ELK1,4_GABP{A,B1}:0.413435646088;HOX{A4,D4}:0.405268095245;HES1:0.391452803851;KLF4:0.383393538635;OCT4_SOX2{dimer}:0.380148778983;NFE2:0.379226170533;ALX1:0.369804715882;HOX{A5,B5}:0.360546142934;NR6A1:0.352737318281;ZNF143:0.348573733082;HOXA9_MEIS1:0.338756673146;bHLH_family:0.325452055593;FOXL1:0.317315865557;GLI1..3:0.281562038588;SOX17:0.266221154407;PRDM1:0.265387395616;NFATC1..3:0.245714868776;MYBL2:0.240429139944;TP53:0.214914932022;GFI1:0.207482002724;LEF1_TCF7_TCF7L1,2:0.206684972483;TOPORS:0.200380335223;NFY{A,B,C}:0.195876330409;FOXP3:0.140964244873;CDX1,2,4:0.140817412942;IKZF2:0.123652059798;EN1,2:0.11805198992;TFAP2B:0.107890712263;TFCP2:0.103667219579;BACH2:0.0994385789578;NKX6-1,2:0.0981448948028;GFI1B:0.0951491988838;FOXD3:0.0823843161024;GTF2A1,2:0.0820244577305;IKZF1:0.0789986532975;SRF:0.0757850656961;XBP1:0.0683513576957;CDC5L:0.0656006852566;XCPE1{core}:0.0626623088053;PAX4:0.0585210597075;RXRA_VDR{dimer}:0.0570010373688;RXR{A,B,G}:0.0480062521634;POU3F1..4:0.0352424891889;FOXM1:0.0285047742558;MYOD1:0.02628808648;PAX5:0.0202317093904;HNF4A_NR2F1,2:0.0166080367621;TBP:0.0109887596493;POU5F1:0.00644637116054;HLF:0.00482261753241;CUX2:-0.00589328468835;AHR_ARNT_ARNT2:-0.00854440429854;LHX3,4:-0.0127623208412;MAFB:-0.0139477770349;SNAI1..3:-0.0202309344143;MTE{core}:-0.020290445477;IRF1,2:-0.020319115544;FOX{I1,J2}:-0.0279268424896;GATA4:-0.0363391021622;FOS_FOS{B,L1}_JUN{B,D}:-0.0371236548633;HNF1A:-0.0415049541758;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0420677406337;HIC1:-0.070402098774;NRF1:-0.0788175184082;STAT1,3:-0.0818316669755;EBF1:-0.082232390983;MZF1:-0.0876895728909;MAZ:-0.0912652844342;CRX:-0.0976354100951;GTF2I:-0.126021352451;YY1:-0.126868078865;ZNF238:-0.128023359466;ZBTB6:-0.134546282284;IRF7:-0.135888786293;NR5A1,2:-0.136816163459;SOX{8,9,10}:-0.145858627517;ZIC1..3:-0.152414264275;GCM1,2:-0.166339159521;VSX1,2:-0.171767700081;PRRX1,2:-0.172970932271;SOX2:-0.192591413717;PDX1:-0.201823280541;NFKB1_REL_RELA:-0.20445073557;FOSL2:-0.218004366694;LMO2:-0.226181228548;GZF1:-0.235482173161;ZEB1:-0.244725436998;SMAD1..7,9:-0.245887233416;BREu{core}:-0.249042731079;POU6F1:-0.250883763639;ARID5B:-0.257960879171;ZNF148:-0.315509505765;NFIX:-0.319978899723;EGR1..3:-0.322448155731;PITX1..3:-0.328430929479;ESR1:-0.343198578638;HBP1_HMGB_SSRP1_UBTF:-0.352930964957;RREB1:-0.386740162847;POU2F1..3:-0.39046076841;CEBPA,B_DDIT3:-0.391741424064;SP1:-0.395570845607;STAT2,4,6:-0.398713147527;ELF1,2,4:-0.401618301303;GATA6:-0.402780961661;RFX2..5_RFXANK_RFXAP:-0.403599116582;FOXQ1:-0.405351700434;NKX2-1,4:-0.428641219574;FOXP1:-0.442259287055;NR1H4:-0.481793458739;EP300:-0.483032402818;AR:-0.486061000866;MED-1{core}:-0.496649964787;ZFP161:-0.498208738802;PAX1,9:-0.501165291627;MEF2{A,B,C,D}:-0.505288613315;NKX2-3_NKX2-5:-0.509375926605;ETS1,2:-0.522710247288;TFAP2{A,C}:-0.531714951579;DMAP1_NCOR{1,2}_SMARC:-0.532489918435;PPARG:-0.539403566903;ATF6:-0.552160844191;SPIB:-0.55311158833;PBX1:-0.554824312688;REST:-0.559269195905;ATF5_CREB3:-0.567920958922;PAX2:-0.57774313453;MYFfamily:-0.599166106588;RUNX1..3:-0.610818470678;NFIL3:-0.610882549587;RBPJ:-0.611703920361;SPI1:-0.616606868005;PATZ1:-0.616813072123;PAX3,7:-0.628096568834;DBP:-0.68579671677;HOX{A6,A7,B6,B7}:-0.694500610878;SPZ1:-0.701258457312;FOX{F1,F2,J1}:-0.709105389443;HIF1A:-0.748789409196;MTF1:-0.757116483597;BPTF:-0.761732694948;FOXO1,3,4:-0.765246068991;ATF4:-0.781380243679;TFAP4:-0.789595817828;NANOG:-0.814352534556;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.820717354454;NHLH1,2:-0.872374084186;ZNF423:-0.880934837901;FOX{D1,D2}:-0.886275393442;CREB1:-0.957167747857;ESRRA:-0.970136239172;FOXN1:-0.992470091929;SREBF1,2:-1.04734984104;TGIF1:-1.04783779905;ATF2:-1.11168401191;SOX5:-1.12765020878;TLX2:-1.15211937805;NANOG{mouse}:-1.16931888298;RORA:-1.33867689439;JUN:-1.4201909485
|top_motifs=NR3C1:1.92360010564;AIRE:1.27048358446;ADNP_IRX_SIX_ZHX:1.25150724299;POU1F1:1.2175170462;HSF1,2:1.16262435032;E2F1..5:0.94021099716;UFEwm:0.939558351937;NKX3-2:0.925221294027;ZBTB16:0.879644447359;NKX3-1:0.85957597076;TEAD1:0.857223404674;PAX8:0.811767777907;TEF:0.795581584595;EVI1:0.777160841576;ONECUT1,2:0.74928807743;FOXA2:0.697723783923;ZNF384:0.688845949687;MYB:0.682921717174;NFE2L2:0.682507100736;T:0.660692861157;TAL1_TCF{3,4,12}:0.660595387752;HAND1,2:0.658953315255;NFE2L1:0.647960540507;TLX1..3_NFIC{dimer}:0.640746896512;TFDP1:0.631854812911;PAX6:0.563736337955;HMGA1,2:0.53761801865;NKX2-2,8:0.528326971964;HMX1:0.527895289579;ALX4:0.46091904169;TBX4,5:0.455182834768;RFX1:0.4362750417;STAT5{A,B}:0.436190140734;ELK1,4_GABP{A,B1}:0.413435646088;HOX{A4,D4}:0.405268095245;HES1:0.391452803851;KLF4:0.383393538635;OCT4_SOX2{dimer}:0.380148778983;NFE2:0.379226170533;ALX1:0.369804715882;HOX{A5,B5}:0.360546142934;NR6A1:0.352737318281;ZNF143:0.348573733082;HOXA9_MEIS1:0.338756673146;bHLH_family:0.325452055593;FOXL1:0.317315865557;GLI1..3:0.281562038588;SOX17:0.266221154407;PRDM1:0.265387395616;NFATC1..3:0.245714868776;MYBL2:0.240429139944;TP53:0.214914932022;GFI1:0.207482002724;LEF1_TCF7_TCF7L1,2:0.206684972483;TOPORS:0.200380335223;NFY{A,B,C}:0.195876330409;FOXP3:0.140964244873;CDX1,2,4:0.140817412942;IKZF2:0.123652059798;EN1,2:0.11805198992;TFAP2B:0.107890712263;TFCP2:0.103667219579;BACH2:0.0994385789578;NKX6-1,2:0.0981448948028;GFI1B:0.0951491988838;FOXD3:0.0823843161024;GTF2A1,2:0.0820244577305;IKZF1:0.0789986532975;SRF:0.0757850656961;XBP1:0.0683513576957;CDC5L:0.0656006852566;XCPE1{core}:0.0626623088053;PAX4:0.0585210597075;RXRA_VDR{dimer}:0.0570010373688;RXR{A,B,G}:0.0480062521634;POU3F1..4:0.0352424891889;FOXM1:0.0285047742558;MYOD1:0.02628808648;PAX5:0.0202317093904;HNF4A_NR2F1,2:0.0166080367621;TBP:0.0109887596493;POU5F1:0.00644637116054;HLF:0.00482261753241;CUX2:-0.00589328468835;AHR_ARNT_ARNT2:-0.00854440429854;LHX3,4:-0.0127623208412;MAFB:-0.0139477770349;SNAI1..3:-0.0202309344143;MTE{core}:-0.020290445477;IRF1,2:-0.020319115544;FOX{I1,J2}:-0.0279268424896;GATA4:-0.0363391021622;FOS_FOS{B,L1}_JUN{B,D}:-0.0371236548633;HNF1A:-0.0415049541758;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0420677406337;HIC1:-0.070402098774;NRF1:-0.0788175184082;STAT1,3:-0.0818316669755;EBF1:-0.082232390983;MZF1:-0.0876895728909;MAZ:-0.0912652844342;CRX:-0.0976354100951;GTF2I:-0.126021352451;YY1:-0.126868078865;ZNF238:-0.128023359466;ZBTB6:-0.134546282284;IRF7:-0.135888786293;NR5A1,2:-0.136816163459;SOX{8,9,10}:-0.145858627517;ZIC1..3:-0.152414264275;GCM1,2:-0.166339159521;VSX1,2:-0.171767700081;PRRX1,2:-0.172970932271;SOX2:-0.192591413717;PDX1:-0.201823280541;NFKB1_REL_RELA:-0.20445073557;FOSL2:-0.218004366694;LMO2:-0.226181228548;GZF1:-0.235482173161;ZEB1:-0.244725436998;SMAD1..7,9:-0.245887233416;BREu{core}:-0.249042731079;POU6F1:-0.250883763639;ARID5B:-0.257960879171;ZNF148:-0.315509505765;NFIX:-0.319978899723;EGR1..3:-0.322448155731;PITX1..3:-0.328430929479;ESR1:-0.343198578638;HBP1_HMGB_SSRP1_UBTF:-0.352930964957;RREB1:-0.386740162847;POU2F1..3:-0.39046076841;CEBPA,B_DDIT3:-0.391741424064;SP1:-0.395570845607;STAT2,4,6:-0.398713147527;ELF1,2,4:-0.401618301303;GATA6:-0.402780961661;RFX2..5_RFXANK_RFXAP:-0.403599116582;FOXQ1:-0.405351700434;NKX2-1,4:-0.428641219574;FOXP1:-0.442259287055;NR1H4:-0.481793458739;EP300:-0.483032402818;AR:-0.486061000866;MED-1{core}:-0.496649964787;ZFP161:-0.498208738802;PAX1,9:-0.501165291627;MEF2{A,B,C,D}:-0.505288613315;NKX2-3_NKX2-5:-0.509375926605;ETS1,2:-0.522710247288;TFAP2{A,C}:-0.531714951579;DMAP1_NCOR{1,2}_SMARC:-0.532489918435;PPARG:-0.539403566903;ATF6:-0.552160844191;SPIB:-0.55311158833;PBX1:-0.554824312688;REST:-0.559269195905;ATF5_CREB3:-0.567920958922;PAX2:-0.57774313453;MYFfamily:-0.599166106588;RUNX1..3:-0.610818470678;NFIL3:-0.610882549587;RBPJ:-0.611703920361;SPI1:-0.616606868005;PATZ1:-0.616813072123;PAX3,7:-0.628096568834;DBP:-0.68579671677;HOX{A6,A7,B6,B7}:-0.694500610878;SPZ1:-0.701258457312;FOX{F1,F2,J1}:-0.709105389443;HIF1A:-0.748789409196;MTF1:-0.757116483597;BPTF:-0.761732694948;FOXO1,3,4:-0.765246068991;ATF4:-0.781380243679;TFAP4:-0.789595817828;NANOG:-0.814352534556;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.820717354454;NHLH1,2:-0.872374084186;ZNF423:-0.880934837901;FOX{D1,D2}:-0.886275393442;CREB1:-0.957167747857;ESRRA:-0.970136239172;FOXN1:-0.992470091929;SREBF1,2:-1.04734984104;TGIF1:-1.04783779905;ATF2:-1.11168401191;SOX5:-1.12765020878;TLX2:-1.15211937805;NANOG{mouse}:-1.16931888298;RORA:-1.33867689439;JUN:-1.4201909485
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10851-111F5;search_select_hide=table117:FF:10851-111F5
}}
}}

Latest revision as of 15:09, 3 June 2020

Name:mesothelioma cell line:Mero-41
Species:Human (Homo sapiens)
Library ID:CNhs13067
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuemesothelium
dev stageNA
sexmale
age60
cell typemesothelial cell
cell lineMero-41
companyECACC
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005438
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13067 CAGE DRX007940 DRR008812
Accession ID Hg19

Library idBAMCTSS
CNhs13067 DRZ000237 DRZ001622
Accession ID Hg38

Library idBAMCTSS
CNhs13067 DRZ011587 DRZ012972
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
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C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13067

Jaspar motifP-value
MA0002.20.244
MA0003.10.324
MA0004.10.678
MA0006.10.318
MA0007.10.695
MA0009.10.76
MA0014.10.351
MA0017.10.697
MA0018.21.73242e-6
MA0019.10.891
MA0024.14.64257e-5
MA0025.10.00203
MA0027.10.598
MA0028.10.0436
MA0029.10.963
MA0030.10.0159
MA0031.10.00479
MA0035.20.573
MA0038.10.726
MA0039.20.79
MA0040.10.92
MA0041.10.86
MA0042.10.79
MA0043.11.66743e-9
MA0046.10.383
MA0047.20.0304
MA0048.10.0017
MA0050.10.314
MA0051.10.387
MA0052.10.00149
MA0055.10.00436
MA0057.10.144
MA0058.10.155
MA0059.10.0815
MA0060.10.258
MA0061.10.337
MA0062.20.586
MA0065.20.117
MA0066.10.375
MA0067.16.87172e-4
MA0068.18.43059e-5
MA0069.10.769
MA0070.10.605
MA0071.10.589
MA0072.10.132
MA0073.10.705
MA0074.10.759
MA0076.10.829
MA0077.10.368
MA0078.10.86
MA0079.20.0218
MA0080.22.94732e-12
MA0081.10.0044
MA0083.10.365
MA0084.10.414
MA0087.10.401
MA0088.10.00249
MA0090.10.00302
MA0091.10.964
MA0092.10.248
MA0093.10.799
MA0099.20.179
MA0100.10.731
MA0101.10.254
MA0102.25.50757e-4
MA0103.10.465
MA0104.20.343
MA0105.10.679
MA0106.10.0264
MA0107.10.109
MA0108.20.0169
MA0111.10.846
MA0112.20.00897
MA0113.10.515
MA0114.10.0866
MA0115.10.172
MA0116.10.959
MA0117.10.929
MA0119.10.00765
MA0122.10.514
MA0124.10.56
MA0125.10.749
MA0131.10.877
MA0135.10.00612
MA0136.12.01726e-9
MA0137.20.504
MA0138.20.0839
MA0139.10.683
MA0140.10.662
MA0141.10.532
MA0142.10.386
MA0143.10.976
MA0144.10.909
MA0145.10.212
MA0146.10.872
MA0147.10.135
MA0148.10.106
MA0149.10.0833
MA0150.10.155
MA0152.10.74
MA0153.10.251
MA0154.10.949
MA0155.10.931
MA0156.10.00178
MA0157.10.0324
MA0159.10.736
MA0160.10.886
MA0162.10.392
MA0163.10.311
MA0164.10.314
MA0258.10.348
MA0259.10.863



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13067

Novel motifP-value
10.32
100.423
1000.14
1010.236
1020.314
1030.272
1040.752
1050.0248
1060.577
1070.0454
1080.887
1090.0826
110.793
1100.546
1110.994
1120.762
1130.00921
1140.402
1150.309
1160.453
1170.891
1180.488
1190.301
120.774
1200.276
1210.663
1220.422
1230.0839
1240.0168
1250.934
1260.703
1270.77
1280.228
1290.963
130.0989
1300.431
1310.916
1320.937
1330.0788
1340.458
1350.42
1360.156
1370.136
1380.97
1390.0824
140.319
1400.221
1410.758
1420.606
1430.226
1440.491
1450.571
1460.656
1470.242
1480.411
1490.841
150.404
1500.0326
1510.264
1520.179
1530.417
1540.966
1550.0127
1560.173
1570.18
1580.133
1590.781
160.146
1600.312
1610.532
1620.934
1630.804
1640.00787
1650.817
1660.289
1670.308
1680.397
1690.0169
170.808
180.144
190.7
20.711
200.996
210.0726
220.923
230.837
240.621
250.762
260.172
270.848
280.622
290.00509
30.281
300.649
310.634
320.035
330.305
340.166
350.335
360.837
370.92
380.868
390.963
40.372
400.255
410.0927
420.244
430.452
440.313
450.253
460.501
470.619
480.544
490.361
50.849
500.96
510.585
520.51
530.466
540.996
550.796
560.495
570.0624
580.238
590.601
60.918
600.439
610.929
620.577
630.641
640.848
650.911
660.415
670.78
680.861
690.971
70.956
700.268
710.00743
720.691
730.338
740.0135
750.742
760.433
770.212
780.44
790.0574
80.0572
800.114
810.0534
821
830.796
840.49
850.55
860.0649
870.192
880.506
890.354
90.333
900.436
910.596
920.561
930.751
940.472
950.801
960.647
970.88
980.099
990.0417



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13067


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0102424 (mesothelioma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)

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