FF:10079-102A7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005817 | ||
|accession_numbers=CAGE;DRX008672;DRR009544;DRZ000969;DRZ002354;DRZ012319;DRZ013704 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0007100,UBERON:0000948,UBERON:0002079,UBERON:0000479,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0002081,UBERON:0004151,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010079 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10079-102A7 | |id=FF:10079-102A7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010079 | ||
|is_obsolete= | |||
|library_id=CNhs11790 | |||
|library_id_phase_based=2:CNhs11790 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10079 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10079 | |||
|name=left atrium, adult, donor1 | |name=left atrium, adult, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11790,LSID820,release009,COMPLETED | |profile_hcage=CNhs11790,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0.660246464403414,0,0.225179326089987,0,0.385413166197324,0.975790985646705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232174345827946,0,0,0,0,0,0.680400845522411,0,0,0.935986951755004,0,0,0,0,0,0,0,0,0,0,0,0,0.132391748095693,0.385497356176373,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.234186964128339,0,0.173595131722566,0,0.681366380547863,0,0,0.136843336915242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148045974339127,0,0,0.0675674196169498,0.129515756449626,0.11709348206417,0,0.039448274740592,0.033807299895225,0.0986447574564875,0,0,0,0,-0.0980353512377064,0.6137313903772,0,0,0,0,0,0.11709348206417,0,0,0,0,0,0,0,0,0,0,0,0.0207198881417083,0.234186964128339,0,0,0.222168939309337,0.197123534939147,0,0,0.234186964128339,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0.234186964128339,0.234186964128339,0,0,0,0.25031553859162,0,0.436909006167841,-0.143515142523472,0,0,0.114693202951832,0,0.586450165845621,0,0,0.234186964128339,0,0.234186964128339,0,0,-0.128119866952565,0,0.962046682711192,0,0,0,0,0,-0.0712852667700687,0,0.118967021773301,-0.0683442610773682,0,0.102767757982979,0,0,-0.270240669334324,0,0.113307480334598,0.302777187852956,0.389429762192937,0.384819615840973,-0.055712496781182,0,0,0,0.274094600601679,-0.358132448989474,0,0,-0.121779851751874,0.734556071876085,0,0,1.37369648448703,0,0.28314634794401,0.249402418255486,0,0.197497261276504,0,0,0,0,0,0,0,0,0.234186964128339,0,0,1.23826304758657,0.0585087594974046,0,0,0,0.0597499109807268,0.405059382352801,0,0.107487562424498,0.991369041017031,0.243358498161816,0.114975903143988,-0.0530744071600863,0.0179389857706252,0.284060438835708,0.388101064833928,0.212176512719034,-0.00695253524998618,0.0867851147572,0.681139053936866,0,0.239300218207829,0.124722595805838,0.155232036793907,0.048232415856393,0.0990758740355375,-0.0895037989320546,0.00295573965316143,0,0,0.14675864943364,0.216055947315022,0,0.234186964128339,0.288244027313695,0.0775552115812181,0.263331618901796,0.245566749601272,0.019724137370296,-0.11115994688156,0.67977007464027,0.555022781403912,0.0730116042176772,0.438333802332575,0.104682327903702,0.385497356176373,0.135563499500911,0.0647373261349921,-0.288417693230138,-0.118331759301495,0,0.463537062218696,0.16584270305097,0.234186964128339,0.163139222648963,0.267232229278706,0,0.224239556934025,0.332217994048438,0,0,0,0.0206591071838809,0.497494413877184,-0.502548369899593,0.602412566324883,0.152641794620829,0,-0.114907130087093,0.171960952747285,0.323462162999194,0.0139605786646913,0.0271761000885877,0.213966442069611,0,0.204860609280948,0.0135601486944357,-0.0611917255445361,-0.110211703102492,-0.0313964589188969,-0.036897449215364,-0.0584468268118252,-0.0071663648888034,-0.0481341873469113,0.104193012711907,0.22351936951028,0,0.146060131653051,0.0527825299025654,0.128914483782126,0.91812628512362,0.0858321643333165,0.145255565436595,0,-0.197749201247426,1.41521275233563,0.0359902700133066,0,-0.00884535718015689,0.330687022013474,0.62965416695318,0.0719646199666701,0,0.0265310953946576,1.65638505663878,0.0841112132944033,0.103031029934186,0.151220141849043,0.497494413877184,0.436083082510982,0.129515756449626,0.285843986012595,-0.0218959746150253,0,-0.203629992544036,0,0.234186964128339,0.263640653449796,0.150021318411985,0,0.214424654176856,-0.223705558037023,0.0560304232081198,0.607334495451994,0.234186964128339,0,0.265294886927125,0,0.91099522491985,0.975727609641202,0.234186964128339,0.25133744952808,-0.253326341486756,0,0.551623654949158,0,0,-0.177527765965176,0,0.332949230040199,0,0,-0.0156943324704851,0,0,0,0,0,0.149114608657857,0,0,0,0.11709348206417,0,0.107470107278206,0.256139218684182,-0.120646366088109,0,0,0,0,0,0.234186964128339,0,0,0.0244341690842298,0,-0.0357862743802599,0.16238370655993,0.262479940499953,0,0,0,0,0.0184635615748639,-0.203236562094724,0,-0.131862706497632,0,0,0,0,0.148045974339127,0,0,0,0,-0.057730457053664,0.0677669516220575,0,0,0,0.841965424578028,0,0,0,0.0257719287178899,-0.0615463803709295,0,0,0.133969019647186,0.0522211811145736,0.294137385484857,-0.0815818795468414,0,-0.350711193212801,-0.582271727888289,-0.125101909086725,0,0,0.236147282087297,0,0,0.14857410992849,0,0.385497356176373,0,0,0,0,0,0,0,0.171182843776618,0,0,0,0,0,0.385497356176373,0,0,0,0,0,0.147153978013959,0.293273299517863,0,0,0,0,0,0,0,0.092987458985266,0.0333219564032205,0,0,0,0,0,0,0,0,0.306932802127226,0,0,0,0,0,0.681366380547863,0,0,0,0,1.04058674637356,0,0,0.108135223982859,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,0.52471075905076,0,0,0,0,0,0,0,0.385413166197324,0,0.91099522491985,0,0,-0.113884373708977,0,0,0,0.129390579339182,0,0.225179326089987,0.660246464403414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11709348206417,0.192748678088186,0,0,0.0152970085890192,0.0832718307080055,0.479491304803335,0.239345255198076,0,0,0.0974948795686655,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234186964128339,0,0,0,0,0,0,0.137960992838336,0,0,0,0,0,0,0,0.680400845522411,0,0,0.0250606722636433,0,0,0,0,0,0,-0.17088335859254,-0.0904717217349605,0.171191755064723,0,0,0.723305568886928,0.194361634456137,0.234186964128339,0.00561725765604182,0.188424126774015,0,0.318719968757472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232174345827946,0,0,0,0,0,0,0,0,0,0,0,0,0.192748678088186,0,0,0,0,0,0,0,0,0,0,0.11709348206417,0,0,0,0,0.941784185918322,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830976756651211,0,0,0,0.510219339229884,0,0,0,0,0,0,0.385497356176373,0,0.497494413877184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317876701936533,0,0,0,0,0,0,0,0,0,0,0.119817717669642,0,0,0.61202438916436,0,0.575869832173387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852610317757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| |||
|rna_box=102 | |rna_box=102 | ||
|rna_catalog_number=Cat:AM6854 | |rna_catalog_number=Cat:AM6854 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=100 | |rna_weight_ug=100 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.05074379250302e-252!GO:0005737;cytoplasm;5.41425388654201e-197!GO:0044444;cytoplasmic part;1.87411479872813e-150!GO:0043226;organelle;6.83176762397878e-118!GO:0043229;intracellular organelle;1.38312530317759e-117!GO:0043231;intracellular membrane-bound organelle;3.65840951372088e-106!GO:0043227;membrane-bound organelle;3.65840951372088e-106!GO:0044422;organelle part;1.83193917197173e-85!GO:0044446;intracellular organelle part;2.79312498380288e-84!GO:0005515;protein binding;4.11089080080525e-77!GO:0005739;mitochondrion;1.60334564972443e-76!GO:0032991;macromolecular complex;3.06155938552985e-74!GO:0030529;ribonucleoprotein complex;5.60755819669742e-54!GO:0044429;mitochondrial part;2.5346284112975e-53!GO:0031090;organelle membrane;6.05070377261468e-45!GO:0044237;cellular metabolic process;5.71974701295892e-42!GO:0043233;organelle lumen;2.24027597986352e-41!GO:0031974;membrane-enclosed lumen;2.24027597986352e-41!GO:0043234;protein complex;3.01638194824536e-41!GO:0044238;primary metabolic process;3.42328160812058e-41!GO:0019538;protein metabolic process;5.79418506599038e-41!GO:0031967;organelle envelope;3.89716410466049e-40!GO:0031975;envelope;6.76072359516833e-40!GO:0016043;cellular component organization and biogenesis;3.13606504264736e-39!GO:0005840;ribosome;1.47584688776939e-38!GO:0006412;translation;3.11747083569213e-37!GO:0044260;cellular macromolecule metabolic process;5.65122867833739e-37!GO:0003723;RNA binding;8.26162562950197e-37!GO:0043170;macromolecule metabolic process;6.44579409637356e-35!GO:0044267;cellular protein metabolic process;3.25942467990918e-34!GO:0005740;mitochondrial envelope;1.14261156139386e-33!GO:0003735;structural constituent of ribosome;1.38912854816006e-33!GO:0031966;mitochondrial membrane;2.11131595497913e-32!GO:0015031;protein transport;4.89871615145438e-32!GO:0033036;macromolecule localization;6.80169777849342e-32!GO:0005829;cytosol;5.97063381034935e-31!GO:0008104;protein localization;1.12480100598054e-30!GO:0045184;establishment of protein localization;1.58319919986568e-30!GO:0033279;ribosomal subunit;1.84706369083529e-29!GO:0009058;biosynthetic process;1.86145762096046e-29!GO:0009059;macromolecule biosynthetic process;2.02703131631746e-29!GO:0019866;organelle inner membrane;2.54978110406175e-29!GO:0005743;mitochondrial inner membrane;1.20260885538668e-28!GO:0044249;cellular biosynthetic process;2.50155407116218e-28!GO:0044428;nuclear part;3.90901890310728e-27!GO:0046907;intracellular transport;1.68720631364706e-26!GO:0006119;oxidative phosphorylation;2.59197236403407e-25!GO:0044455;mitochondrial membrane part;6.5635481230296e-24!GO:0031980;mitochondrial lumen;1.37181175119585e-23!GO:0005759;mitochondrial matrix;1.37181175119585e-23!GO:0065003;macromolecular complex assembly;3.90788593164371e-23!GO:0005746;mitochondrial respiratory chain;6.8767179729234e-23!GO:0022607;cellular component assembly;2.12909147814288e-22!GO:0006886;intracellular protein transport;7.17337836742766e-22!GO:0016071;mRNA metabolic process;3.40254136353114e-20!GO:0008380;RNA splicing;1.83755997789185e-19!GO:0050136;NADH dehydrogenase (quinone) activity;5.23319865381519e-19!GO:0003954;NADH dehydrogenase activity;5.23319865381519e-19!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.23319865381519e-19!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.2348558820743e-19!GO:0005783;endoplasmic reticulum;9.67384204556765e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.72682850348088e-19!GO:0051641;cellular localization;1.06941058103377e-18!GO:0006396;RNA processing;1.72058993110525e-18!GO:0043228;non-membrane-bound organelle;2.28524177009972e-18!GO:0043232;intracellular non-membrane-bound organelle;2.28524177009972e-18!GO:0051649;establishment of cellular localization;2.85318334760657e-18!GO:0005634;nucleus;6.6456892147737e-18!GO:0030964;NADH dehydrogenase complex (quinone);6.37447275185101e-17!GO:0045271;respiratory chain complex I;6.37447275185101e-17!GO:0005747;mitochondrial respiratory chain complex I;6.37447275185101e-17!GO:0051186;cofactor metabolic process;7.22073821066027e-17!GO:0006397;mRNA processing;9.63973447503208e-17!GO:0042775;organelle ATP synthesis coupled electron transport;1.06185546824526e-16!GO:0042773;ATP synthesis coupled electron transport;1.06185546824526e-16!GO:0008092;cytoskeletal protein binding;2.09496530546911e-16!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.32379745832433e-16!GO:0048770;pigment granule;3.11856071964206e-16!GO:0042470;melanosome;3.11856071964206e-16!GO:0015935;small ribosomal subunit;3.24096493621282e-16!GO:0016192;vesicle-mediated transport;4.12956555414375e-16!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.71165505531327e-16!GO:0044445;cytosolic part;6.81915041306067e-16!GO:0012505;endomembrane system;3.18096704501776e-15!GO:0006996;organelle organization and biogenesis;3.63513672620579e-15!GO:0031981;nuclear lumen;6.53515141456732e-15!GO:0005761;mitochondrial ribosome;1.80987286078136e-14!GO:0000313;organellar ribosome;1.80987286078136e-14!GO:0005794;Golgi apparatus;2.00259281359332e-14!GO:0015934;large ribosomal subunit;2.05466810192752e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.4466511817117e-14!GO:0005681;spliceosome;1.55649652889227e-13!GO:0022618;protein-RNA complex assembly;1.61118205560855e-13!GO:0044265;cellular macromolecule catabolic process;2.23079648163325e-13!GO:0009055;electron carrier activity;3.38263836864336e-13!GO:0008135;translation factor activity, nucleic acid binding;4.1979704865668e-13!GO:0008134;transcription factor binding;5.70322304531803e-13!GO:0006732;coenzyme metabolic process;5.81917872086808e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.68877766356342e-13!GO:0044248;cellular catabolic process;9.79222355789837e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;1.19973770563033e-12!GO:0016462;pyrophosphatase activity;1.35778810538845e-12!GO:0006457;protein folding;1.5668096502369e-12!GO:0006091;generation of precursor metabolites and energy;1.63750362897929e-12!GO:0000166;nucleotide binding;3.19574411932323e-12!GO:0006512;ubiquitin cycle;3.3902244278039e-12!GO:0017111;nucleoside-triphosphatase activity;4.20032730192926e-12!GO:0006605;protein targeting;7.52651813769377e-12!GO:0000502;proteasome complex (sensu Eukaryota);9.42453203480468e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.44790363058189e-11!GO:0044432;endoplasmic reticulum part;1.87711599976673e-11!GO:0048193;Golgi vesicle transport;2.00857455182913e-11!GO:0045333;cellular respiration;2.50341169700553e-11!GO:0019941;modification-dependent protein catabolic process;2.71363846503707e-11!GO:0043632;modification-dependent macromolecule catabolic process;2.71363846503707e-11!GO:0006511;ubiquitin-dependent protein catabolic process;3.43302518101214e-11!GO:0016874;ligase activity;3.43302518101214e-11!GO:0044257;cellular protein catabolic process;3.6995494652117e-11!GO:0015980;energy derivation by oxidation of organic compounds;7.35397283068835e-11!GO:0009057;macromolecule catabolic process;1.00544711263369e-10!GO:0010467;gene expression;1.69496449330173e-10!GO:0043283;biopolymer metabolic process;1.79124348431889e-10!GO:0043285;biopolymer catabolic process;2.81438835309851e-10!GO:0009060;aerobic respiration;3.08886107186023e-10!GO:0030029;actin filament-based process;3.18535779359921e-10!GO:0003779;actin binding;3.31559187690154e-10!GO:0016491;oxidoreductase activity;4.34734199821006e-10!GO:0015629;actin cytoskeleton;4.34734199821006e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.10614553875463e-10!GO:0051082;unfolded protein binding;5.48750808434537e-10!GO:0005654;nucleoplasm;9.09286501389574e-10!GO:0008565;protein transporter activity;9.2181547472421e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.06887996152783e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.16992445568597e-09!GO:0030036;actin cytoskeleton organization and biogenesis;1.2446241096072e-09!GO:0006461;protein complex assembly;1.41096674569181e-09!GO:0006413;translational initiation;1.79774287675827e-09!GO:0006446;regulation of translational initiation;2.06837622736387e-09!GO:0012501;programmed cell death;2.44910389659725e-09!GO:0003743;translation initiation factor activity;2.60834251613089e-09!GO:0048523;negative regulation of cellular process;3.2378743115625e-09!GO:0006915;apoptosis;3.40672507700127e-09!GO:0006084;acetyl-CoA metabolic process;3.41986854818819e-09!GO:0030163;protein catabolic process;3.66167674742947e-09!GO:0043412;biopolymer modification;3.8973066948792e-09!GO:0006099;tricarboxylic acid cycle;4.86957391829871e-09!GO:0046356;acetyl-CoA catabolic process;4.86957391829871e-09!GO:0005773;vacuole;5.4551205010187e-09!GO:0031982;vesicle;6.61809558635591e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.34415154063895e-09!GO:0044451;nucleoplasm part;8.65901634444184e-09!GO:0008219;cell death;9.31659921803164e-09!GO:0016265;death;9.31659921803164e-09!GO:0006464;protein modification process;9.38175799305254e-09!GO:0003924;GTPase activity;9.40342499677367e-09!GO:0051246;regulation of protein metabolic process;9.65098343541212e-09!GO:0017076;purine nucleotide binding;1.46286736689631e-08!GO:0031410;cytoplasmic vesicle;1.57391783600278e-08!GO:0031988;membrane-bound vesicle;2.07860248849392e-08!GO:0000323;lytic vacuole;2.74878562291854e-08!GO:0005764;lysosome;2.74878562291854e-08!GO:0043687;post-translational protein modification;3.36424410225521e-08!GO:0009056;catabolic process;3.41395475437951e-08!GO:0005635;nuclear envelope;3.59088504962522e-08!GO:0016023;cytoplasmic membrane-bound vesicle;3.6859220830491e-08!GO:0009109;coenzyme catabolic process;3.92713060719204e-08!GO:0048519;negative regulation of biological process;4.41206477391157e-08!GO:0005793;ER-Golgi intermediate compartment;5.08160759019245e-08!GO:0015078;hydrogen ion transmembrane transporter activity;5.16478601564951e-08!GO:0032553;ribonucleotide binding;5.16478601564951e-08!GO:0032555;purine ribonucleotide binding;5.16478601564951e-08!GO:0051187;cofactor catabolic process;5.66391182053732e-08!GO:0015986;ATP synthesis coupled proton transport;5.6929778061208e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.6929778061208e-08!GO:0051188;cofactor biosynthetic process;6.25004598896128e-08!GO:0005768;endosome;6.66274826130921e-08!GO:0019829;cation-transporting ATPase activity;7.57211255786109e-08!GO:0008639;small protein conjugating enzyme activity;8.68365578667432e-08!GO:0005525;GTP binding;1.34265584348338e-07!GO:0046034;ATP metabolic process;1.67175566735969e-07!GO:0004842;ubiquitin-protein ligase activity;1.84861155043874e-07!GO:0003712;transcription cofactor activity;1.86116576264694e-07!GO:0006913;nucleocytoplasmic transport;2.00197832871268e-07!GO:0017038;protein import;2.76648005695223e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.41850027935751e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.7284454619194e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.7284454619194e-07!GO:0016044;membrane organization and biogenesis;3.99483923302374e-07!GO:0006163;purine nucleotide metabolic process;4.08293895024521e-07!GO:0019787;small conjugating protein ligase activity;4.59833763143884e-07!GO:0051169;nuclear transport;4.69633947276051e-07!GO:0005789;endoplasmic reticulum membrane;4.75315716931701e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.86152068250133e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.9410667572933e-07!GO:0006793;phosphorus metabolic process;5.78460588893245e-07!GO:0006796;phosphate metabolic process;5.78460588893245e-07!GO:0009141;nucleoside triphosphate metabolic process;6.58171832485389e-07!GO:0031252;leading edge;6.97911543079633e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;7.55552839472971e-07!GO:0000375;RNA splicing, via transesterification reactions;7.55552839472971e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.55552839472971e-07!GO:0005788;endoplasmic reticulum lumen;8.20607844461826e-07!GO:0045259;proton-transporting ATP synthase complex;8.63694340266349e-07!GO:0044262;cellular carbohydrate metabolic process;1.12467469481809e-06!GO:0031965;nuclear membrane;1.15442375387433e-06!GO:0007010;cytoskeleton organization and biogenesis;1.16872197840292e-06!GO:0009150;purine ribonucleotide metabolic process;1.21515243092847e-06!GO:0032561;guanyl ribonucleotide binding;1.31337704856236e-06!GO:0019001;guanyl nucleotide binding;1.31337704856236e-06!GO:0044431;Golgi apparatus part;1.44159346187983e-06!GO:0006754;ATP biosynthetic process;1.95009820691999e-06!GO:0006753;nucleoside phosphate metabolic process;1.95009820691999e-06!GO:0009108;coenzyme biosynthetic process;2.27568390710609e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.55618733182e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.87483601053741e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.87483601053741e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.81747428917639e-06!GO:0008361;regulation of cell size;6.01575487777538e-06!GO:0009259;ribonucleotide metabolic process;6.02212014684299e-06!GO:0005770;late endosome;6.40961733516967e-06!GO:0009142;nucleoside triphosphate biosynthetic process;6.56412465597606e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.56412465597606e-06!GO:0016310;phosphorylation;6.96603031527761e-06!GO:0016564;transcription repressor activity;7.4474214643955e-06!GO:0006164;purine nucleotide biosynthetic process;8.60050437948243e-06!GO:0016604;nuclear body;8.78819848214969e-06!GO:0007264;small GTPase mediated signal transduction;8.78819848214969e-06!GO:0016049;cell growth;9.35966531121876e-06!GO:0043069;negative regulation of programmed cell death;1.00470410755485e-05!GO:0007517;muscle development;1.16181126923393e-05!GO:0043066;negative regulation of apoptosis;1.22894144212087e-05!GO:0006606;protein import into nucleus;1.39555056357379e-05!GO:0005741;mitochondrial outer membrane;1.44435283181411e-05!GO:0030120;vesicle coat;1.45540222031671e-05!GO:0030662;coated vesicle membrane;1.45540222031671e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.53811142372666e-05!GO:0006916;anti-apoptosis;1.65565047719988e-05!GO:0051170;nuclear import;1.83239720986722e-05!GO:0031968;organelle outer membrane;2.32996741955807e-05!GO:0019867;outer membrane;2.35851594451199e-05!GO:0016881;acid-amino acid ligase activity;2.37347060474036e-05!GO:0006950;response to stress;2.6402054389876e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.65015697640663e-05!GO:0003714;transcription corepressor activity;2.86839713008592e-05!GO:0060047;heart contraction;2.92336811172933e-05!GO:0003015;heart process;2.92336811172933e-05!GO:0009117;nucleotide metabolic process;3.01104975695907e-05!GO:0000314;organellar small ribosomal subunit;3.02423972478929e-05!GO:0005763;mitochondrial small ribosomal subunit;3.02423972478929e-05!GO:0005762;mitochondrial large ribosomal subunit;3.05405197039032e-05!GO:0000315;organellar large ribosomal subunit;3.05405197039032e-05!GO:0048475;coated membrane;3.61653412099878e-05!GO:0030117;membrane coat;3.61653412099878e-05!GO:0005730;nucleolus;3.62777838180342e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.81514895242078e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.82077271857971e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.88670847452823e-05!GO:0019899;enzyme binding;4.78751056600849e-05!GO:0006366;transcription from RNA polymerase II promoter;4.80034534190903e-05!GO:0042981;regulation of apoptosis;5.32817345691548e-05!GO:0051128;regulation of cellular component organization and biogenesis;5.44079664290569e-05!GO:0030133;transport vesicle;6.12268348206874e-05!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;6.36212775027769e-05!GO:0015002;heme-copper terminal oxidase activity;6.36212775027769e-05!GO:0016675;oxidoreductase activity, acting on heme group of donors;6.36212775027769e-05!GO:0004129;cytochrome-c oxidase activity;6.36212775027769e-05!GO:0043067;regulation of programmed cell death;6.61210077246943e-05!GO:0016607;nuclear speck;6.78484488000986e-05!GO:0005798;Golgi-associated vesicle;6.91990212378105e-05!GO:0006897;endocytosis;7.26264814921736e-05!GO:0010324;membrane invagination;7.26264814921736e-05!GO:0044453;nuclear membrane part;7.27522291246065e-05!GO:0016887;ATPase activity;7.70325562286496e-05!GO:0001558;regulation of cell growth;7.72274157503632e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.83327079905773e-05!GO:0006118;electron transport;7.88482988917494e-05!GO:0000139;Golgi membrane;9.29255946062034e-05!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.50018058699146e-05!GO:0008307;structural constituent of muscle;0.000103649892714897!GO:0004298;threonine endopeptidase activity;0.000115456224766118!GO:0030016;myofibril;0.000120664347729152!GO:0043292;contractile fiber;0.000125067517950957!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000140882295049079!GO:0000151;ubiquitin ligase complex;0.000154970168275825!GO:0030554;adenyl nucleotide binding;0.00016005764261765!GO:0009260;ribonucleotide biosynthetic process;0.000174503546257311!GO:0044449;contractile fiber part;0.000191227525306854!GO:0051789;response to protein stimulus;0.000194691744724994!GO:0006986;response to unfolded protein;0.000194691744724994!GO:0005048;signal sequence binding;0.00019999400142197!GO:0005912;adherens junction;0.000214617364598466!GO:0030532;small nuclear ribonucleoprotein complex;0.000217556086765582!GO:0006613;cotranslational protein targeting to membrane;0.000218605349482532!GO:0022890;inorganic cation transmembrane transporter activity;0.000224525008511824!GO:0050789;regulation of biological process;0.000243131531421628!GO:0006635;fatty acid beta-oxidation;0.000261032072356189!GO:0042623;ATPase activity, coupled;0.000262698287291512!GO:0048471;perinuclear region of cytoplasm;0.000280948221682294!GO:0006414;translational elongation;0.000286370348456763!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00029501908309593!GO:0004812;aminoacyl-tRNA ligase activity;0.00029501908309593!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00029501908309593!GO:0044440;endosomal part;0.00029501908309593!GO:0010008;endosome membrane;0.00029501908309593!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000316767153992871!GO:0043284;biopolymer biosynthetic process;0.000332302435162118!GO:0007005;mitochondrion organization and biogenesis;0.000360281921404153!GO:0008016;regulation of heart contraction;0.00036070440379954!GO:0032559;adenyl ribonucleotide binding;0.000391154018103821!GO:0019843;rRNA binding;0.000399284322213043!GO:0005643;nuclear pore;0.000400263536521225!GO:0000245;spliceosome assembly;0.000405035994789814!GO:0005791;rough endoplasmic reticulum;0.000408362652192829!GO:0065002;intracellular protein transport across a membrane;0.000451037451659073!GO:0030027;lamellipodium;0.000565961860888333!GO:0008654;phospholipid biosynthetic process;0.000575584297798536!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000578873949661415!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000578873949661415!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000578873949661415!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000586694749237968!GO:0043038;amino acid activation;0.000604024361760626!GO:0006418;tRNA aminoacylation for protein translation;0.000604024361760626!GO:0043039;tRNA aminoacylation;0.000604024361760626!GO:0051427;hormone receptor binding;0.000619553337989191!GO:0032446;protein modification by small protein conjugation;0.000659728417687641!GO:0046930;pore complex;0.000690812418003492!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000726099654885038!GO:0006259;DNA metabolic process;0.000750187193343217!GO:0003746;translation elongation factor activity;0.000767726901335663!GO:0016567;protein ubiquitination;0.000781862907814382!GO:0001726;ruffle;0.000812128659156407!GO:0005913;cell-cell adherens junction;0.000812128659156407!GO:0005524;ATP binding;0.000812128659156407!GO:0043021;ribonucleoprotein binding;0.000960958540272011!GO:0048522;positive regulation of cellular process;0.000963584947486074!GO:0016853;isomerase activity;0.000976406705820945!GO:0051287;NAD binding;0.00101219976495026!GO:0043566;structure-specific DNA binding;0.00105160096921539!GO:0005769;early endosome;0.00107597776043239!GO:0035257;nuclear hormone receptor binding;0.00111922321555134!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00119375343093298!GO:0003697;single-stranded DNA binding;0.00125189252521117!GO:0040008;regulation of growth;0.0013272313253939!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00138278136972644!GO:0015399;primary active transmembrane transporter activity;0.00138278136972644!GO:0003012;muscle system process;0.00143766204867635!GO:0006936;muscle contraction;0.00143766204867635!GO:0051920;peroxiredoxin activity;0.00143766204867635!GO:0006752;group transfer coenzyme metabolic process;0.00145577330290264!GO:0045786;negative regulation of progression through cell cycle;0.00146521639715671!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00146521639715671!GO:0030017;sarcomere;0.00146521639715671!GO:0045045;secretory pathway;0.00150131591783399!GO:0050662;coenzyme binding;0.00154052176346956!GO:0005905;coated pit;0.00155860268568777!GO:0005975;carbohydrate metabolic process;0.00162033910884498!GO:0019752;carboxylic acid metabolic process;0.00166513130317321!GO:0008250;oligosaccharyl transferase complex;0.00166691269461737!GO:0006631;fatty acid metabolic process;0.0016795988806653!GO:0007243;protein kinase cascade;0.00170796841892567!GO:0016197;endosome transport;0.00171236855549492!GO:0031674;I band;0.00181122583663551!GO:0006082;organic acid metabolic process;0.00183544311610271!GO:0051540;metal cluster binding;0.00205239381937131!GO:0051536;iron-sulfur cluster binding;0.00205239381937131!GO:0004576;oligosaccharyl transferase activity;0.00205351800797276!GO:0006733;oxidoreduction coenzyme metabolic process;0.00205695507886404!GO:0030867;rough endoplasmic reticulum membrane;0.00206496795212943!GO:0003713;transcription coactivator activity;0.00216437329047833!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00238270010021552!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00238270010021552!GO:0006979;response to oxidative stress;0.00246991006556087!GO:0009892;negative regulation of metabolic process;0.00251072158387965!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00252926870622981!GO:0048518;positive regulation of biological process;0.00266379372187648!GO:0009966;regulation of signal transduction;0.0028334720978868!GO:0051539;4 iron, 4 sulfur cluster binding;0.00293523510300509!GO:0031324;negative regulation of cellular metabolic process;0.00296708470835537!GO:0006612;protein targeting to membrane;0.00296882633366393!GO:0005885;Arp2/3 protein complex;0.00305862969066048!GO:0043623;cellular protein complex assembly;0.00328349109408938!GO:0001725;stress fiber;0.00330084748343777!GO:0032432;actin filament bundle;0.00330084748343777!GO:0006333;chromatin assembly or disassembly;0.00353094251384904!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00363254158633773!GO:0006607;NLS-bearing substrate import into nucleus;0.00365087807837775!GO:0051270;regulation of cell motility;0.0036584234606437!GO:0016787;hydrolase activity;0.00367825238686728!GO:0065004;protein-DNA complex assembly;0.00374406734318442!GO:0007265;Ras protein signal transduction;0.00376272549429562!GO:0045454;cell redox homeostasis;0.00376272549429562!GO:0006892;post-Golgi vesicle-mediated transport;0.00378165812685648!GO:0031902;late endosome membrane;0.00387676838179038!GO:0007507;heart development;0.0038968067503844!GO:0008154;actin polymerization and/or depolymerization;0.00394650580028768!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00397509121953071!GO:0005856;cytoskeleton;0.00398228864533493!GO:0033116;ER-Golgi intermediate compartment membrane;0.00422273719792713!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00425084941895182!GO:0050794;regulation of cellular process;0.00459455979219424!GO:0030663;COPI coated vesicle membrane;0.00460949883341539!GO:0030126;COPI vesicle coat;0.00460949883341539!GO:0044255;cellular lipid metabolic process;0.00467638469861257!GO:0019395;fatty acid oxidation;0.00467718343966845!GO:0009165;nucleotide biosynthetic process;0.00492850238501196!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00551628445396576!GO:0044264;cellular polysaccharide metabolic process;0.00551628445396576!GO:0016529;sarcoplasmic reticulum;0.00551628445396576!GO:0016528;sarcoplasm;0.00551628445396576!GO:0005774;vacuolar membrane;0.00564535653807711!GO:0065007;biological regulation;0.00565913752852801!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00593396943659253!GO:0055003;cardiac myofibril assembly;0.0059655276849847!GO:0055013;cardiac muscle cell development;0.0059655276849847!GO:0016563;transcription activator activity;0.00602871567770764!GO:0043492;ATPase activity, coupled to movement of substances;0.00605627163679966!GO:0005976;polysaccharide metabolic process;0.00632327334322563!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0065595184586444!GO:0033043;regulation of organelle organization and biogenesis;0.0065595184586444!GO:0008287;protein serine/threonine phosphatase complex;0.0065974561639729!GO:0005977;glycogen metabolic process;0.00695248541516443!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00716225124867514!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00758226749139795!GO:0005865;striated muscle thin filament;0.00780439806060108!GO:0030137;COPI-coated vesicle;0.00788895567491786!GO:0048659;smooth muscle cell proliferation;0.00802071200482039!GO:0015631;tubulin binding;0.00805975719593523!GO:0030018;Z disc;0.00805975719593523!GO:0032940;secretion by cell;0.00808058039766789!GO:0008286;insulin receptor signaling pathway;0.00815254760791444!GO:0007242;intracellular signaling cascade;0.00821131033543982!GO:0033673;negative regulation of kinase activity;0.00821131033543982!GO:0006469;negative regulation of protein kinase activity;0.00821131033543982!GO:0006007;glucose catabolic process;0.00822454300530642!GO:0016859;cis-trans isomerase activity;0.00841226995822129!GO:0005667;transcription factor complex;0.00867352731710275!GO:0050811;GABA receptor binding;0.0087139712494802!GO:0017166;vinculin binding;0.00872207222236025!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00887713556095351!GO:0006323;DNA packaging;0.00908438762468237!GO:0009967;positive regulation of signal transduction;0.00918428894737408!GO:0030132;clathrin coat of coated pit;0.00918428894737408!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00918430764326773!GO:0048644;muscle morphogenesis;0.00918430764326773!GO:0055008;cardiac muscle morphogensis;0.00918430764326773!GO:0005869;dynactin complex;0.00923124263868418!GO:0017022;myosin binding;0.00939053257865743!GO:0050657;nucleic acid transport;0.00967139017751865!GO:0051236;establishment of RNA localization;0.00967139017751865!GO:0050658;RNA transport;0.00967139017751865!GO:0051087;chaperone binding;0.00990648200999332!GO:0042254;ribosome biogenesis and assembly;0.0100051744070317!GO:0019318;hexose metabolic process;0.0100891864294039!GO:0006818;hydrogen transport;0.010147577873238!GO:0005916;fascia adherens;0.0101876903682728!GO:0030041;actin filament polymerization;0.0102296971848718!GO:0018196;peptidyl-asparagine modification;0.0102296971848718!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0102296971848718!GO:0015036;disulfide oxidoreductase activity;0.0103518309481091!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0105100704712133!GO:0001944;vasculature development;0.0106767308794378!GO:0040011;locomotion;0.0107065122163096!GO:0005765;lysosomal membrane;0.0109328425972645!GO:0006334;nucleosome assembly;0.0109635894708771!GO:0043488;regulation of mRNA stability;0.0109635894708771!GO:0043487;regulation of RNA stability;0.0109635894708771!GO:0015992;proton transport;0.0111014942620521!GO:0035258;steroid hormone receptor binding;0.0113714592095095!GO:0006417;regulation of translation;0.0113736349230535!GO:0042805;actinin binding;0.0114091730310222!GO:0016481;negative regulation of transcription;0.0114159023482982!GO:0001666;response to hypoxia;0.0114253784433942!GO:0006403;RNA localization;0.0119205654364917!GO:0040012;regulation of locomotion;0.0120375603847395!GO:0042802;identical protein binding;0.0121645235927765!GO:0048500;signal recognition particle;0.0121903888471194!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0121933191350329!GO:0006006;glucose metabolic process;0.0123492530245962!GO:0032787;monocarboxylic acid metabolic process;0.0126409040007745!GO:0031032;actomyosin structure organization and biogenesis;0.0126409040007745!GO:0008139;nuclear localization sequence binding;0.013147245883112!GO:0006633;fatty acid biosynthetic process;0.0134147897654649!GO:0031589;cell-substrate adhesion;0.0134599316545629!GO:0046314;phosphocreatine biosynthetic process;0.0134791932286128!GO:0006603;phosphocreatine metabolic process;0.0134791932286128!GO:0019902;phosphatase binding;0.0135503841338544!GO:0016791;phosphoric monoester hydrolase activity;0.0135845142615234!GO:0005996;monosaccharide metabolic process;0.0138102830397702!GO:0006891;intra-Golgi vesicle-mediated transport;0.0140606646756176!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.0140765970330516!GO:0005862;muscle thin filament tropomyosin;0.0141268627856769!GO:0030049;muscle filament sliding;0.0141268627856769!GO:0033275;actin-myosin filament sliding;0.0141268627856769!GO:0048487;beta-tubulin binding;0.0147437727074197!GO:0046474;glycerophospholipid biosynthetic process;0.0147437727074197!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0147437727074197!GO:0045792;negative regulation of cell size;0.0148126370381633!GO:0004722;protein serine/threonine phosphatase activity;0.01483511567851!GO:0030308;negative regulation of cell growth;0.0151744537111382!GO:0031326;regulation of cellular biosynthetic process;0.0152334761323982!GO:0004177;aminopeptidase activity;0.0154974854526076!GO:0019208;phosphatase regulator activity;0.0157289509903263!GO:0009081;branched chain family amino acid metabolic process;0.0158003891648538!GO:0006073;glucan metabolic process;0.0158942713154434!GO:0044437;vacuolar part;0.0160330063435889!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0160330063435889!GO:0004667;prostaglandin-D synthase activity;0.0160330063435889!GO:0050802;circadian sleep/wake cycle, sleep;0.0160330063435889!GO:0022410;circadian sleep/wake cycle process;0.0160330063435889!GO:0042749;regulation of circadian sleep/wake cycle;0.0160330063435889!GO:0016860;intramolecular oxidoreductase activity;0.0161955544769551!GO:0006693;prostaglandin metabolic process;0.0164212912679853!GO:0006692;prostanoid metabolic process;0.0164212912679853!GO:0043681;protein import into mitochondrion;0.0164803405133867!GO:0006629;lipid metabolic process;0.0168898505239951!GO:0001568;blood vessel development;0.0172447121000895!GO:0006650;glycerophospholipid metabolic process;0.0172796585326748!GO:0045098;type III intermediate filament;0.0173412336308264!GO:0001516;prostaglandin biosynthetic process;0.0179649392083022!GO:0046457;prostanoid biosynthetic process;0.0179649392083022!GO:0051348;negative regulation of transferase activity;0.0183880819322196!GO:0014706;striated muscle development;0.0184208093478517!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0185840949173588!GO:0030518;steroid hormone receptor signaling pathway;0.0186766882983464!GO:0003724;RNA helicase activity;0.0187987033931406!GO:0031072;heat shock protein binding;0.0193004204355027!GO:0000902;cell morphogenesis;0.0197439720641989!GO:0032989;cellular structure morphogenesis;0.0197439720641989!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0197881363510438!GO:0006643;membrane lipid metabolic process;0.0197881363510438!GO:0031497;chromatin assembly;0.0200322168625499!GO:0030658;transport vesicle membrane;0.0201662944872888!GO:0016405;CoA-ligase activity;0.0203438390556572!GO:0030100;regulation of endocytosis;0.0206194768203363!GO:0007160;cell-matrix adhesion;0.0209703937314214!GO:0007040;lysosome organization and biogenesis;0.021015546055466!GO:0033002;muscle cell proliferation;0.021023610557215!GO:0030055;cell-matrix junction;0.0210499153653169!GO:0030334;regulation of cell migration;0.0211094293774135!GO:0032780;negative regulation of ATPase activity;0.0213029858200033!GO:0030832;regulation of actin filament length;0.0213208403743928!GO:0048660;regulation of smooth muscle cell proliferation;0.0213521272106612!GO:0008610;lipid biosynthetic process;0.0214041990865573!GO:0030127;COPII vesicle coat;0.0214712298896005!GO:0012507;ER to Golgi transport vesicle membrane;0.0214712298896005!GO:0007006;mitochondrial membrane organization and biogenesis;0.0217029076793216!GO:0005083;small GTPase regulator activity;0.0218314029101663!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0223431596978559!GO:0045047;protein targeting to ER;0.0223431596978559!GO:0045926;negative regulation of growth;0.0223871916807293!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.02382612645903!GO:0030134;ER to Golgi transport vesicle;0.0239101386790557!GO:0005924;cell-substrate adherens junction;0.0239542780151792!GO:0032535;regulation of cellular component size;0.0240483463224874!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0240483463224874!GO:0051271;negative regulation of cell motility;0.0241612815054132!GO:0005100;Rho GTPase activator activity;0.02484824522441!GO:0048738;cardiac muscle development;0.0252288102756251!GO:0019362;pyridine nucleotide metabolic process;0.025593563700523!GO:0046467;membrane lipid biosynthetic process;0.0259342025064883!GO:0004300;enoyl-CoA hydratase activity;0.0260302391249736!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0260892163749462!GO:0019904;protein domain specific binding;0.026397499736751!GO:0030659;cytoplasmic vesicle membrane;0.0265465639398526!GO:0005523;tropomyosin binding;0.0266417295777473!GO:0003729;mRNA binding;0.0266417295777473!GO:0012506;vesicle membrane;0.0266417295777473!GO:0051235;maintenance of localization;0.0277456370927521!GO:0045892;negative regulation of transcription, DNA-dependent;0.0280858924785929!GO:0006509;membrane protein ectodomain proteolysis;0.0280858924785929!GO:0033619;membrane protein proteolysis;0.0280858924785929!GO:0018106;peptidyl-histidine phosphorylation;0.0283016625401607!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0284125332837559!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0284142886263133!GO:0009083;branched chain family amino acid catabolic process;0.0284944975149647!GO:0051252;regulation of RNA metabolic process;0.0292212591438837!GO:0018202;peptidyl-histidine modification;0.029236450906962!GO:0055010;ventricular cardiac muscle morphogenesis;0.0299621394656784!GO:0016584;nucleosome positioning;0.0302884653188103!GO:0003690;double-stranded DNA binding;0.0306593519579361!GO:0030521;androgen receptor signaling pathway;0.0307710451326927!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.031014536285079!GO:0004111;creatine kinase activity;0.031014536285079!GO:0008180;signalosome;0.0315777767292635!GO:0004185;serine carboxypeptidase activity;0.0316365845651705!GO:0004598;peptidylamidoglycolate lyase activity;0.031999178273797!GO:0004504;peptidylglycine monooxygenase activity;0.031999178273797!GO:0006096;glycolysis;0.031999178273797!GO:0045893;positive regulation of transcription, DNA-dependent;0.0320030591602591!GO:0004448;isocitrate dehydrogenase activity;0.0320053303955667!GO:0030172;troponin C binding;0.032136008345378!GO:0006402;mRNA catabolic process;0.0323558354900327!GO:0030031;cell projection biogenesis;0.0325194840345206!GO:0004721;phosphoprotein phosphatase activity;0.0326549026991267!GO:0006399;tRNA metabolic process;0.0334003125341897!GO:0045947;negative regulation of translational initiation;0.0334310696539683!GO:0031970;organelle envelope lumen;0.0334310696539683!GO:0006518;peptide metabolic process;0.0339547954727967!GO:0035035;histone acetyltransferase binding;0.0343104210356259!GO:0008147;structural constituent of bone;0.034355320202569!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0348342116398893!GO:0010257;NADH dehydrogenase complex assembly;0.0348342116398893!GO:0033108;mitochondrial respiratory chain complex assembly;0.0348342116398893!GO:0015630;microtubule cytoskeleton;0.0357888217883068!GO:0006112;energy reserve metabolic process;0.0358976783484196!GO:0019888;protein phosphatase regulator activity;0.0358976783484196!GO:0046394;carboxylic acid biosynthetic process;0.0358976783484196!GO:0016053;organic acid biosynthetic process;0.0358976783484196!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0358976783484196!GO:0001527;microfibril;0.0365901536474187!GO:0031301;integral to organelle membrane;0.0372999746510823!GO:0006778;porphyrin metabolic process;0.0372999746510823!GO:0033013;tetrapyrrole metabolic process;0.0372999746510823!GO:0007266;Rho protein signal transduction;0.0372999746510823!GO:0030140;trans-Golgi network transport vesicle;0.0372999746510823!GO:0022415;viral reproductive process;0.0374224271557647!GO:0008047;enzyme activator activity;0.0374224271557647!GO:0006644;phospholipid metabolic process;0.0374636511993621!GO:0030346;protein phosphatase 2B binding;0.0374636511993621!GO:0016408;C-acyltransferase activity;0.0378404488650473!GO:0006767;water-soluble vitamin metabolic process;0.038149833976177!GO:0051726;regulation of cell cycle;0.0381717315542211!GO:0048468;cell development;0.0381717315542211!GO:0016126;sterol biosynthetic process;0.0381717315542211!GO:0009889;regulation of biosynthetic process;0.0383304843973096!GO:0051028;mRNA transport;0.0386534041909936!GO:0030118;clathrin coat;0.0389103666586655!GO:0008312;7S RNA binding;0.0396690000373705!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0398808395552868!GO:0005813;centrosome;0.0400635725341173!GO:0051393;alpha-actinin binding;0.0408313287851325!GO:0008064;regulation of actin polymerization and/or depolymerization;0.04103653856327!GO:0031901;early endosome membrane;0.0416500854244913!GO:0009066;aspartate family amino acid metabolic process;0.0422168823777531!GO:0005853;eukaryotic translation elongation factor 1 complex;0.04268898638216!GO:0000074;regulation of progression through cell cycle;0.04268898638216!GO:0014866;skeletal myofibril assembly;0.0430748764328517!GO:0050839;cell adhesion molecule binding;0.0431537801081551!GO:0007050;cell cycle arrest;0.0438417879402493!GO:0030911;TPR domain binding;0.0438955207810535!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0440858813316585!GO:0019838;growth factor binding;0.0443338192049234!GO:0006769;nicotinamide metabolic process;0.0454817415444769!GO:0005520;insulin-like growth factor binding;0.0462208153711362!GO:0019903;protein phosphatase binding;0.046473669521743!GO:0015035;protein disulfide oxidoreductase activity;0.0470981837298488!GO:0001980;ischemic regulation of systemic arterial blood pressure;0.0474969632823544!GO:0030336;negative regulation of cell migration;0.0477301128555084!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.048100662506332!GO:0040013;negative regulation of locomotion;0.0489839332646583!GO:0030660;Golgi-associated vesicle membrane;0.0490303938869137!GO:0016311;dephosphorylation;0.0491040189751405!GO:0048662;negative regulation of smooth muscle cell proliferation;0.0491065389025771!GO:0007033;vacuole organization and biogenesis;0.0496818283622111!GO:0000096;sulfur amino acid metabolic process;0.0498030767175285 | |||
|sample_id=10079 | |sample_id=10079 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=left atrium | |sample_tissue=left atrium | ||
|top_motifs=MEF2{A,B,C,D}:5.43561568177;NR1H4:4.19959932578;NFE2L1:3.44200752478;ESRRA:3.27728408349;GCM1,2:3.22706886296;GATA4:3.02809173573;NR5A1,2:3.00276352713;SRF:2.47015038468;MYBL2:2.24478389256;PAX6:2.22640401206;TFAP2{A,C}:2.09833298786;TGIF1:2.05750010683;AR:1.96539819344;MAFB:1.88137510383;XBP1:1.84483368883;SPZ1:1.79176153004;NR6A1:1.75336501185;HOX{A4,D4}:1.74451440011;NFATC1..3:1.73569532182;POU3F1..4:1.73108791521;TFAP4:1.70785760239;IKZF2:1.70700146739;TLX1..3_NFIC{dimer}:1.60926935255;NKX2-2,8:1.54986555763;FOXL1:1.54553320479;RXR{A,B,G}:1.53588366854;GFI1B:1.53107447007;SMAD1..7,9:1.52182120616;HMX1:1.52111669978;KLF4:1.51420246502;HAND1,2:1.48392653722;UFEwm:1.45890412951;PDX1:1.44905109296;SOX5:1.40790923309;HIC1:1.39355036282;TFCP2:1.3899656369;NKX2-1,4:1.3836548208;TBP:1.37052465182;NR3C1:1.2922330953;TLX2:1.26789776131;MTF1:1.25960005985;PPARG:1.22620425898;RBPJ:1.22528759031;EVI1:1.19418258915;PRDM1:1.18666292805;PAX5:1.11269488569;CUX2:1.10615659376;ZIC1..3:1.0979164154;GATA6:1.0899085778;T:1.08373481704;TBX4,5:1.06406078378;ZNF423:1.0593798855;IRF7:1.00047962747;NKX3-2:0.992573288519;NHLH1,2:0.990326452835;HOX{A6,A7,B6,B7}:0.988272077754;RREB1:0.94650616615;MAZ:0.89269153089;TEAD1:0.891731869808;IKZF1:0.884657231743;FOXO1,3,4:0.849483529568;TFAP2B:0.828672818236;RORA:0.818621269631;EGR1..3:0.792177977333;MED-1{core}:0.776222593252;EP300:0.775638700213;PATZ1:0.767115086029;RXRA_VDR{dimer}:0.761919116286;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.760541138469;ZNF384:0.719652610132;HOX{A5,B5}:0.706002244681;SREBF1,2:0.691851952457;EN1,2:0.675840728399;REST:0.673008311756;SP1:0.653561409713;GTF2I:0.647151698544;MYFfamily:0.645715040075;ZFP161:0.590562536519;NKX6-1,2:0.582624198576;EBF1:0.58068224993;CDX1,2,4:0.567388972526;GTF2A1,2:0.565695073793;POU6F1:0.553253489478;FOXQ1:0.521059695789;FOX{D1,D2}:0.508037036545;NFIX:0.479437598256;ALX4:0.469030953694;HNF4A_NR2F1,2:0.463063534242;STAT2,4,6:0.416745121255;MZF1:0.415857435684;ESR1:0.39894004816;LMO2:0.370454336201;IRF1,2:0.3552956144;ZNF238:0.353012899079;BREu{core}:0.343033039465;MTE{core}:0.334811110834;CDC5L:0.320061647158;XCPE1{core}:0.301710218309;STAT1,3:0.240720820144;GLI1..3:0.224228448749;ATF6:0.217053491892;MYOD1:0.215115818616;ZBTB16:0.199724564217;ETS1,2:0.106125596651;BPTF:0.102341016484;GZF1:0.0990003881075;ZEB1:0.0793152822405;ATF2:0.0657385812844;ZBTB6:-0.0220205818962;TOPORS:-0.0364301946652;AIRE:-0.0415596469011;ALX1:-0.0477206489179;SOX17:-0.0595463875113;NANOG:-0.0827962333834;SOX{8,9,10}:-0.0844572658667;ZNF148:-0.099893103962;SPIB:-0.101670353504;PAX2:-0.119038077295;HSF1,2:-0.133560584756;SPI1:-0.155365453764;LHX3,4:-0.15919675528;FOX{F1,F2,J1}:-0.164322850489;FOXP3:-0.168082249165;SNAI1..3:-0.210696777162;FOSL2:-0.240625698678;LEF1_TCF7_TCF7L1,2:-0.282121754207;TP53:-0.299564647086;HNF1A:-0.339376588871;ATF4:-0.342214851812;GFI1:-0.355909838473;PAX1,9:-0.377002100119;HMGA1,2:-0.415881721201;FOXA2:-0.427435901384;JUN:-0.438315068005;ATF5_CREB3:-0.438416400784;YY1:-0.46065796744;DMAP1_NCOR{1,2}_SMARC:-0.472190787904;HOXA9_MEIS1:-0.498987896609;NANOG{mouse}:-0.521528199698;HLF:-0.528603396734;FOXN1:-0.545860875969;CEBPA,B_DDIT3:-0.549656215949;ELF1,2,4:-0.576989713617;NRF1:-0.611323189054;ARID5B:-0.625101228629;RFX2..5_RFXANK_RFXAP:-0.648772624032;ZNF143:-0.658839131385;RUNX1..3:-0.667766845661;NFKB1_REL_RELA:-0.681113432829;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.722717368889;PBX1:-0.757785044496;NKX3-1:-0.795261411269;POU1F1:-0.816197627322;POU5F1:-0.82879306118;FOXP1:-0.838737030095;STAT5{A,B}:-0.858443453321;FOXD3:-0.868308241524;TEF:-0.874072172437;NFE2:-0.912992891426;ONECUT1,2:-0.94369433934;NFIL3:-0.952438007565;TAL1_TCF{3,4,12}:-0.968409957869;SOX2:-1.00785553893;RFX1:-1.02052511399;NFY{A,B,C}:-1.02056837225;FOS_FOS{B,L1}_JUN{B,D}:-1.02184736125;VSX1,2:-1.02415115445;BACH2:-1.04908635792;NFE2L2:-1.06550156589;PAX3,7:-1.09394925886;E2F1..5:-1.12686241432;PAX8:-1.13767400399;CREB1:-1.16247405329;FOXM1:-1.2030298316;CRX:-1.21564069254;ADNP_IRX_SIX_ZHX:-1.22714289348;PITX1..3:-1.24782326313;TFDP1:-1.25599474064;HES1:-1.2769841454;OCT4_SOX2{dimer}:-1.33281717991;bHLH_family:-1.34726798879;NKX2-3_NKX2-5:-1.38770982539;AHR_ARNT_ARNT2:-1.40293863165;HIF1A:-1.5245373594;DBP:-1.60551097191;POU2F1..3:-1.63629335256;PRRX1,2:-1.67427981698;HBP1_HMGB_SSRP1_UBTF:-1.78040267279;MYB:-1.80833721091;FOX{I1,J2}:-1.86883325595;ELK1,4_GABP{A,B1}:-1.92479817847;PAX4:-2.00982757009 | |top_motifs=MEF2{A,B,C,D}:5.43561568177;NR1H4:4.19959932578;NFE2L1:3.44200752478;ESRRA:3.27728408349;GCM1,2:3.22706886296;GATA4:3.02809173573;NR5A1,2:3.00276352713;SRF:2.47015038468;MYBL2:2.24478389256;PAX6:2.22640401206;TFAP2{A,C}:2.09833298786;TGIF1:2.05750010683;AR:1.96539819344;MAFB:1.88137510383;XBP1:1.84483368883;SPZ1:1.79176153004;NR6A1:1.75336501185;HOX{A4,D4}:1.74451440011;NFATC1..3:1.73569532182;POU3F1..4:1.73108791521;TFAP4:1.70785760239;IKZF2:1.70700146739;TLX1..3_NFIC{dimer}:1.60926935255;NKX2-2,8:1.54986555763;FOXL1:1.54553320479;RXR{A,B,G}:1.53588366854;GFI1B:1.53107447007;SMAD1..7,9:1.52182120616;HMX1:1.52111669978;KLF4:1.51420246502;HAND1,2:1.48392653722;UFEwm:1.45890412951;PDX1:1.44905109296;SOX5:1.40790923309;HIC1:1.39355036282;TFCP2:1.3899656369;NKX2-1,4:1.3836548208;TBP:1.37052465182;NR3C1:1.2922330953;TLX2:1.26789776131;MTF1:1.25960005985;PPARG:1.22620425898;RBPJ:1.22528759031;EVI1:1.19418258915;PRDM1:1.18666292805;PAX5:1.11269488569;CUX2:1.10615659376;ZIC1..3:1.0979164154;GATA6:1.0899085778;T:1.08373481704;TBX4,5:1.06406078378;ZNF423:1.0593798855;IRF7:1.00047962747;NKX3-2:0.992573288519;NHLH1,2:0.990326452835;HOX{A6,A7,B6,B7}:0.988272077754;RREB1:0.94650616615;MAZ:0.89269153089;TEAD1:0.891731869808;IKZF1:0.884657231743;FOXO1,3,4:0.849483529568;TFAP2B:0.828672818236;RORA:0.818621269631;EGR1..3:0.792177977333;MED-1{core}:0.776222593252;EP300:0.775638700213;PATZ1:0.767115086029;RXRA_VDR{dimer}:0.761919116286;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.760541138469;ZNF384:0.719652610132;HOX{A5,B5}:0.706002244681;SREBF1,2:0.691851952457;EN1,2:0.675840728399;REST:0.673008311756;SP1:0.653561409713;GTF2I:0.647151698544;MYFfamily:0.645715040075;ZFP161:0.590562536519;NKX6-1,2:0.582624198576;EBF1:0.58068224993;CDX1,2,4:0.567388972526;GTF2A1,2:0.565695073793;POU6F1:0.553253489478;FOXQ1:0.521059695789;FOX{D1,D2}:0.508037036545;NFIX:0.479437598256;ALX4:0.469030953694;HNF4A_NR2F1,2:0.463063534242;STAT2,4,6:0.416745121255;MZF1:0.415857435684;ESR1:0.39894004816;LMO2:0.370454336201;IRF1,2:0.3552956144;ZNF238:0.353012899079;BREu{core}:0.343033039465;MTE{core}:0.334811110834;CDC5L:0.320061647158;XCPE1{core}:0.301710218309;STAT1,3:0.240720820144;GLI1..3:0.224228448749;ATF6:0.217053491892;MYOD1:0.215115818616;ZBTB16:0.199724564217;ETS1,2:0.106125596651;BPTF:0.102341016484;GZF1:0.0990003881075;ZEB1:0.0793152822405;ATF2:0.0657385812844;ZBTB6:-0.0220205818962;TOPORS:-0.0364301946652;AIRE:-0.0415596469011;ALX1:-0.0477206489179;SOX17:-0.0595463875113;NANOG:-0.0827962333834;SOX{8,9,10}:-0.0844572658667;ZNF148:-0.099893103962;SPIB:-0.101670353504;PAX2:-0.119038077295;HSF1,2:-0.133560584756;SPI1:-0.155365453764;LHX3,4:-0.15919675528;FOX{F1,F2,J1}:-0.164322850489;FOXP3:-0.168082249165;SNAI1..3:-0.210696777162;FOSL2:-0.240625698678;LEF1_TCF7_TCF7L1,2:-0.282121754207;TP53:-0.299564647086;HNF1A:-0.339376588871;ATF4:-0.342214851812;GFI1:-0.355909838473;PAX1,9:-0.377002100119;HMGA1,2:-0.415881721201;FOXA2:-0.427435901384;JUN:-0.438315068005;ATF5_CREB3:-0.438416400784;YY1:-0.46065796744;DMAP1_NCOR{1,2}_SMARC:-0.472190787904;HOXA9_MEIS1:-0.498987896609;NANOG{mouse}:-0.521528199698;HLF:-0.528603396734;FOXN1:-0.545860875969;CEBPA,B_DDIT3:-0.549656215949;ELF1,2,4:-0.576989713617;NRF1:-0.611323189054;ARID5B:-0.625101228629;RFX2..5_RFXANK_RFXAP:-0.648772624032;ZNF143:-0.658839131385;RUNX1..3:-0.667766845661;NFKB1_REL_RELA:-0.681113432829;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.722717368889;PBX1:-0.757785044496;NKX3-1:-0.795261411269;POU1F1:-0.816197627322;POU5F1:-0.82879306118;FOXP1:-0.838737030095;STAT5{A,B}:-0.858443453321;FOXD3:-0.868308241524;TEF:-0.874072172437;NFE2:-0.912992891426;ONECUT1,2:-0.94369433934;NFIL3:-0.952438007565;TAL1_TCF{3,4,12}:-0.968409957869;SOX2:-1.00785553893;RFX1:-1.02052511399;NFY{A,B,C}:-1.02056837225;FOS_FOS{B,L1}_JUN{B,D}:-1.02184736125;VSX1,2:-1.02415115445;BACH2:-1.04908635792;NFE2L2:-1.06550156589;PAX3,7:-1.09394925886;E2F1..5:-1.12686241432;PAX8:-1.13767400399;CREB1:-1.16247405329;FOXM1:-1.2030298316;CRX:-1.21564069254;ADNP_IRX_SIX_ZHX:-1.22714289348;PITX1..3:-1.24782326313;TFDP1:-1.25599474064;HES1:-1.2769841454;OCT4_SOX2{dimer}:-1.33281717991;bHLH_family:-1.34726798879;NKX2-3_NKX2-5:-1.38770982539;AHR_ARNT_ARNT2:-1.40293863165;HIF1A:-1.5245373594;DBP:-1.60551097191;POU2F1..3:-1.63629335256;PRRX1,2:-1.67427981698;HBP1_HMGB_SSRP1_UBTF:-1.78040267279;MYB:-1.80833721091;FOX{I1,J2}:-1.86883325595;ELK1,4_GABP{A,B1}:-1.92479817847;PAX4:-2.00982757009 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10079-102A7;search_select_hide=table117:FF:10079-102A7 | |||
}} | }} | ||
Latest revision as of 12:20, 3 June 2020
| Name: | left atrium, adult, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11790 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11790
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11790
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.798 |
| 10 | 10 | 0.105 |
| 100 | 100 | 0.441 |
| 101 | 101 | 0.83 |
| 102 | 102 | 0.684 |
| 103 | 103 | 0.977 |
| 104 | 104 | 0.267 |
| 105 | 105 | 0.777 |
| 106 | 106 | 0.275 |
| 107 | 107 | 0.0285 |
| 108 | 108 | 0.152 |
| 109 | 109 | 0.381 |
| 11 | 11 | 0.932 |
| 110 | 110 | 0.378 |
| 111 | 111 | 0.386 |
| 112 | 112 | 0.153 |
| 113 | 113 | 0.136 |
| 114 | 114 | 0.776 |
| 115 | 115 | 0.0414 |
| 116 | 116 | 0.156 |
| 117 | 117 | 0.0103 |
| 118 | 118 | 0.0219 |
| 119 | 119 | 0.0801 |
| 12 | 12 | 0.323 |
| 120 | 120 | 0.187 |
| 121 | 121 | 0.701 |
| 122 | 122 | 0.222 |
| 123 | 123 | 0.0165 |
| 124 | 124 | 0.908 |
| 125 | 125 | 0.857 |
| 126 | 126 | 0.459 |
| 127 | 127 | 0.732 |
| 128 | 128 | 0.0818 |
| 129 | 129 | 0.326 |
| 13 | 13 | 0.101 |
| 130 | 130 | 0.728 |
| 131 | 131 | 0.181 |
| 132 | 132 | 0.0424 |
| 133 | 133 | 0.0223 |
| 134 | 134 | 0.0469 |
| 135 | 135 | 0.0602 |
| 136 | 136 | 0.147 |
| 137 | 137 | 0.669 |
| 138 | 138 | 0.23 |
| 139 | 139 | 0.38 |
| 14 | 14 | 0.807 |
| 140 | 140 | 0.329 |
| 141 | 141 | 0.52 |
| 142 | 142 | 0.862 |
| 143 | 143 | 0.333 |
| 144 | 144 | 0.417 |
| 145 | 145 | 0.614 |
| 146 | 146 | 0.718 |
| 147 | 147 | 0.00465 |
| 148 | 148 | 0.158 |
| 149 | 149 | 0.036 |
| 15 | 15 | 0.251 |
| 150 | 150 | 0.896 |
| 151 | 151 | 0.414 |
| 152 | 152 | 0.237 |
| 153 | 153 | 0.476 |
| 154 | 154 | 0.838 |
| 155 | 155 | 0.881 |
| 156 | 156 | 0.889 |
| 157 | 157 | 0.98 |
| 158 | 158 | 0.276 |
| 159 | 159 | 0.594 |
| 16 | 16 | 0.941 |
| 160 | 160 | 0.395 |
| 161 | 161 | 0.422 |
| 162 | 162 | 0.903 |
| 163 | 163 | 0.501 |
| 164 | 164 | 0.0769 |
| 165 | 165 | 0.281 |
| 166 | 166 | 0.013 |
| 167 | 167 | 0.23 |
| 168 | 168 | 0.295 |
| 169 | 169 | 0.217 |
| 17 | 17 | 0.951 |
| 18 | 18 | 0.812 |
| 19 | 19 | 0.0323 |
| 2 | 2 | 0.0406 |
| 20 | 20 | 0.00672 |
| 21 | 21 | 0.823 |
| 22 | 22 | 0.29 |
| 23 | 23 | 0.0548 |
| 24 | 24 | 0.0405 |
| 25 | 25 | 0.295 |
| 26 | 26 | 0.175 |
| 27 | 27 | 0.194 |
| 28 | 28 | 0.254 |
| 29 | 29 | 0.0341 |
| 3 | 3 | 0.583 |
| 30 | 30 | 0.105 |
| 31 | 31 | 0.57 |
| 32 | 32 | 0.455 |
| 33 | 33 | 0.135 |
| 34 | 34 | 0.117 |
| 35 | 35 | 0.888 |
| 36 | 36 | 0.184 |
| 37 | 37 | 0.676 |
| 38 | 38 | 0.87 |
| 39 | 39 | 0.0996 |
| 4 | 4 | 0.33 |
| 40 | 40 | 0.0376 |
| 41 | 41 | 0.93 |
| 42 | 42 | 0.17 |
| 43 | 43 | 0.673 |
| 44 | 44 | 0.0437 |
| 45 | 45 | 0.15 |
| 46 | 46 | 0.825 |
| 47 | 47 | 0.515 |
| 48 | 48 | 0.394 |
| 49 | 49 | 0.712 |
| 5 | 5 | 0.952 |
| 50 | 50 | 0.977 |
| 51 | 51 | 0.946 |
| 52 | 52 | 0.161 |
| 53 | 53 | 0.767 |
| 54 | 54 | 0.479 |
| 55 | 55 | 0.582 |
| 56 | 56 | 0.541 |
| 57 | 57 | 0.153 |
| 58 | 58 | 0.736 |
| 59 | 59 | 0.207 |
| 6 | 6 | 0.75 |
| 60 | 60 | 0.389 |
| 61 | 61 | 0.17 |
| 62 | 62 | 0.977 |
| 63 | 63 | 0.906 |
| 64 | 64 | 0.772 |
| 65 | 65 | 0.283 |
| 66 | 66 | 0.0027 |
| 67 | 67 | 0.744 |
| 68 | 68 | 0.248 |
| 69 | 69 | 0.811 |
| 7 | 7 | 0.393 |
| 70 | 70 | 0.352 |
| 71 | 71 | 0.218 |
| 72 | 72 | 0.762 |
| 73 | 73 | 0.729 |
| 74 | 74 | 0.569 |
| 75 | 75 | 0.0329 |
| 76 | 76 | 0.0569 |
| 77 | 77 | 0.0196 |
| 78 | 78 | 0.815 |
| 79 | 79 | 0.0362 |
| 8 | 8 | 0.748 |
| 80 | 80 | 0.764 |
| 81 | 81 | 0.686 |
| 82 | 82 | 0.092 |
| 83 | 83 | 0.517 |
| 84 | 84 | 0.264 |
| 85 | 85 | 0.0455 |
| 86 | 86 | 0.539 |
| 87 | 87 | 0.0406 |
| 88 | 88 | 0.969 |
| 89 | 89 | 0.0538 |
| 9 | 9 | 0.424 |
| 90 | 90 | 0.207 |
| 91 | 91 | 0.0547 |
| 92 | 92 | 0.312 |
| 93 | 93 | 0.474 |
| 94 | 94 | 0.131 |
| 95 | 95 | 0.0453 |
| 96 | 96 | 0.606 |
| 97 | 97 | 0.809 |
| 98 | 98 | 0.975 |
| 99 | 99 | 0.108 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11790
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002079 (left cardiac atrium)
0000479 (tissue)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0002081 (cardiac atrium)
0004151 (cardiac chamber)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010079 (human left atrium - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010227 (future cardiac atrium)
UBERON:0010316 (germ layer / neural crest)
