FF:11749-123G3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005254 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008547;DRR009419;DRZ000844;DRZ002229;DRZ012194;DRZ013579 | ||
|ancestors_in_anatomy_facet=UBERON:0001013,UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002570 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000270 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520adipose%252c%2520donor3.CNhs12365.11749-123G3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520adipose%252c%2520donor3.CNhs12365.11749-123G3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520adipose%252c%2520donor3.CNhs12365.11749-123G3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520adipose%252c%2520donor3.CNhs12365.11749-123G3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520adipose%252c%2520donor3.CNhs12365.11749-123G3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11749-123G3 | |id=FF:11749-123G3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000270 | ||
|is_obsolete= | |||
|library_id=CNhs12365 | |||
|library_id_phase_based=2:CNhs12365 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11749 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11749 | |||
|name=mesenchymal precursor cell - adipose, donor3 | |name=mesenchymal precursor cell - adipose, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12365,LSID914,release011,COMPLETED | |profile_hcage=CNhs12365,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.265284261145816,0,0.0468403979509542,0.422630899380045,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0.409793225804772,0,0,0.683155968570765,0,0,0,0,0,0,0,0,0,0,0.191676169220254,0,-0.0500616323558859,0.636371049303614,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0142567459114251,0,0.094683807977649,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105535179431043,0,0,-0.0348467656813919,-0.069547565278699,0.095838084610127,0,0,-0.241702259433086,-0.115359318085741,0,0.425602291232202,0,0,-0.0980353512377064,0.758273679206565,0,0,0,0,0,0,0.191676169220254,0,0,0,0,0,0,0,0,0,0,-0.00053550931233394,0.191676169220254,0,0,0,0.107743997104092,0,0,0.191676169220254,0,0,0 | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=55.7025 | |rna_weight_ug=55.7025 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.14676628462458e-220!GO:0005737;cytoplasm;3.242851491473e-186!GO:0043226;organelle;1.36217700297191e-171!GO:0043229;intracellular organelle;2.87289456102546e-171!GO:0043231;intracellular membrane-bound organelle;1.14116293958399e-170!GO:0043227;membrane-bound organelle;2.19340168438326e-170!GO:0044444;cytoplasmic part;2.54444297536153e-141!GO:0044422;organelle part;1.27115650296793e-136!GO:0044446;intracellular organelle part;4.05716136955621e-135!GO:0032991;macromolecular complex;2.66477744960335e-92!GO:0044237;cellular metabolic process;1.14370950343226e-83!GO:0030529;ribonucleoprotein complex;1.06621197272079e-82!GO:0044238;primary metabolic process;2.78134630804485e-82!GO:0043170;macromolecule metabolic process;6.4024791854092e-74!GO:0043233;organelle lumen;2.04315167175735e-69!GO:0031974;membrane-enclosed lumen;2.04315167175735e-69!GO:0005515;protein binding;8.25587402869489e-69!GO:0005739;mitochondrion;8.20679061461873e-68!GO:0044428;nuclear part;2.86351540723214e-62!GO:0003723;RNA binding;4.22429809852867e-60!GO:0005634;nucleus;1.09114993133813e-55!GO:0031090;organelle membrane;4.845583317618e-53!GO:0005840;ribosome;2.15482524512433e-51!GO:0019538;protein metabolic process;4.40971882492008e-49!GO:0006412;translation;4.66086840113842e-49!GO:0006396;RNA processing;4.73147377756627e-46!GO:0003735;structural constituent of ribosome;1.00297682184657e-45!GO:0043234;protein complex;1.23065885207637e-45!GO:0009058;biosynthetic process;1.87178594384097e-45!GO:0044429;mitochondrial part;7.92925308447206e-45!GO:0044260;cellular macromolecule metabolic process;3.01479639824995e-44!GO:0044267;cellular protein metabolic process;2.45002494577505e-43!GO:0016043;cellular component organization and biogenesis;4.93743979812585e-42!GO:0015031;protein transport;5.90034085037761e-42!GO:0044249;cellular biosynthetic process;1.12933317010817e-41!GO:0033036;macromolecule localization;3.09742043420369e-41!GO:0005829;cytosol;1.34323437216401e-40!GO:0033279;ribosomal subunit;2.12947067866749e-40!GO:0009059;macromolecule biosynthetic process;2.68587274130113e-40!GO:0045184;establishment of protein localization;2.88048786329017e-39!GO:0031981;nuclear lumen;2.41405239787448e-38!GO:0008104;protein localization;3.74708003857415e-38!GO:0031967;organelle envelope;7.13957809342693e-38!GO:0031975;envelope;1.64431427062887e-37!GO:0043283;biopolymer metabolic process;7.41567388689594e-36!GO:0010467;gene expression;1.23206078517256e-34!GO:0016071;mRNA metabolic process;1.8563203255051e-34!GO:0008380;RNA splicing;1.76813776545643e-32!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.12401559134326e-32!GO:0046907;intracellular transport;3.09906310155951e-32!GO:0006397;mRNA processing;1.97992694361574e-30!GO:0043228;non-membrane-bound organelle;2.70480420475199e-29!GO:0043232;intracellular non-membrane-bound organelle;2.70480420475199e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.4767338447467e-28!GO:0005740;mitochondrial envelope;1.81434822785114e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.63496587882914e-28!GO:0065003;macromolecular complex assembly;7.32416369092526e-27!GO:0006996;organelle organization and biogenesis;1.12585236015253e-26!GO:0031966;mitochondrial membrane;1.14376883921154e-26!GO:0006886;intracellular protein transport;1.23089664469836e-26!GO:0019866;organelle inner membrane;7.04271615492374e-26!GO:0022607;cellular component assembly;2.3265454166836e-24!GO:0005743;mitochondrial inner membrane;2.81549454082273e-24!GO:0005783;endoplasmic reticulum;2.29190018132656e-23!GO:0044445;cytosolic part;2.9184716328351e-23!GO:0006119;oxidative phosphorylation;3.13462651550681e-23!GO:0012505;endomembrane system;9.81125685624936e-23!GO:0005681;spliceosome;2.90059664261087e-22!GO:0005654;nucleoplasm;4.72853033892448e-22!GO:0006259;DNA metabolic process;6.42168328993563e-22!GO:0015934;large ribosomal subunit;6.96911819482241e-22!GO:0006457;protein folding;9.65269321966665e-21!GO:0016462;pyrophosphatase activity;3.83117123824886e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.93024092747512e-20!GO:0051649;establishment of cellular localization;4.64561758747859e-20!GO:0044455;mitochondrial membrane part;5.2599824369642e-20!GO:0051641;cellular localization;5.35256352476812e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;5.54215049423363e-20!GO:0044432;endoplasmic reticulum part;6.50485263245571e-20!GO:0031980;mitochondrial lumen;1.19328160158066e-19!GO:0005759;mitochondrial matrix;1.19328160158066e-19!GO:0015935;small ribosomal subunit;1.79572493121978e-19!GO:0017111;nucleoside-triphosphatase activity;2.07139781175711e-19!GO:0048770;pigment granule;2.47316830995915e-18!GO:0042470;melanosome;2.47316830995915e-18!GO:0007049;cell cycle;1.20893055023389e-17!GO:0000166;nucleotide binding;1.2788937829128e-17!GO:0005730;nucleolus;1.63988024540028e-17!GO:0044451;nucleoplasm part;1.92887122741262e-17!GO:0005746;mitochondrial respiratory chain;3.55662482351533e-17!GO:0051186;cofactor metabolic process;3.61421802748406e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.55551224959948e-17!GO:0022618;protein-RNA complex assembly;9.45055456630354e-17!GO:0003676;nucleic acid binding;2.09661925705792e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.46639149097545e-16!GO:0005794;Golgi apparatus;3.52029690492655e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.5376071108528e-15!GO:0003954;NADH dehydrogenase activity;1.5376071108528e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.5376071108528e-15!GO:0005761;mitochondrial ribosome;1.88763437913171e-15!GO:0000313;organellar ribosome;1.88763437913171e-15!GO:0016874;ligase activity;3.15100625042726e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.31576810716991e-15!GO:0044265;cellular macromolecule catabolic process;8.35897166039987e-15!GO:0048193;Golgi vesicle transport;1.13383598095616e-14!GO:0043285;biopolymer catabolic process;1.1736687948402e-14!GO:0008135;translation factor activity, nucleic acid binding;1.52848006070805e-14!GO:0008134;transcription factor binding;1.79673492882108e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.47346244149101e-14!GO:0006605;protein targeting;3.75745986145087e-14!GO:0051082;unfolded protein binding;4.52635889748029e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;5.62820833132564e-14!GO:0044248;cellular catabolic process;7.30254552886359e-14!GO:0009057;macromolecule catabolic process;9.18207309246527e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.53394673843278e-14!GO:0045271;respiratory chain complex I;9.53394673843278e-14!GO:0005747;mitochondrial respiratory chain complex I;9.53394673843278e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.07249831070614e-13!GO:0005793;ER-Golgi intermediate compartment;1.08699908173666e-13!GO:0006512;ubiquitin cycle;1.09566790306854e-13!GO:0019941;modification-dependent protein catabolic process;1.09566790306854e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.09566790306854e-13!GO:0044257;cellular protein catabolic process;1.10126062056566e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.10126062056566e-13!GO:0042773;ATP synthesis coupled electron transport;1.10126062056566e-13!GO:0005789;endoplasmic reticulum membrane;1.38307338069157e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.63733490277375e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.75271976236784e-13!GO:0006732;coenzyme metabolic process;1.84029146875653e-13!GO:0022402;cell cycle process;1.94666753369522e-13!GO:0016070;RNA metabolic process;2.31137652392404e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.91366790743356e-13!GO:0006974;response to DNA damage stimulus;2.94181033037844e-13!GO:0030163;protein catabolic process;1.03451880734916e-12!GO:0042254;ribosome biogenesis and assembly;1.86617461692483e-12!GO:0017076;purine nucleotide binding;2.2265365651104e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;3.09010711433413e-12!GO:0000375;RNA splicing, via transesterification reactions;3.09010711433413e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.09010711433413e-12!GO:0032553;ribonucleotide binding;4.10723452416303e-12!GO:0032555;purine ribonucleotide binding;4.10723452416303e-12!GO:0000278;mitotic cell cycle;5.50076759230271e-12!GO:0016192;vesicle-mediated transport;1.26351649809798e-11!GO:0003743;translation initiation factor activity;2.61483384791286e-11!GO:0009259;ribonucleotide metabolic process;6.59467536108018e-11!GO:0006163;purine nucleotide metabolic process;8.58188776341144e-11!GO:0006413;translational initiation;9.15197889551724e-11!GO:0016887;ATPase activity;1.16205682921828e-10!GO:0009055;electron carrier activity;1.16205682921828e-10!GO:0006281;DNA repair;1.47134909333844e-10!GO:0006399;tRNA metabolic process;1.70209068002312e-10!GO:0009150;purine ribonucleotide metabolic process;2.18414331443944e-10!GO:0005635;nuclear envelope;3.03119385275398e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.13002975245879e-10!GO:0009719;response to endogenous stimulus;4.19304865397948e-10!GO:0005524;ATP binding;4.24377920562354e-10!GO:0006164;purine nucleotide biosynthetic process;4.78993128833631e-10!GO:0006446;regulation of translational initiation;5.22832841715368e-10!GO:0042623;ATPase activity, coupled;5.31913167672746e-10!GO:0005694;chromosome;5.82265414077051e-10!GO:0043412;biopolymer modification;6.0716552211392e-10!GO:0030554;adenyl nucleotide binding;6.15017216134657e-10!GO:0032559;adenyl ribonucleotide binding;8.37912824723705e-10!GO:0009260;ribonucleotide biosynthetic process;9.70815346597437e-10!GO:0031965;nuclear membrane;9.70972830159871e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.09446918187121e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.16943857637453e-09!GO:0003712;transcription cofactor activity;1.36659169168192e-09!GO:0016491;oxidoreductase activity;1.52825742931625e-09!GO:0016604;nuclear body;2.22822431406225e-09!GO:0000074;regulation of progression through cell cycle;2.4091353835517e-09!GO:0006913;nucleocytoplasmic transport;2.45094271894501e-09!GO:0044427;chromosomal part;2.55896634550787e-09!GO:0012501;programmed cell death;2.65778378910133e-09!GO:0051726;regulation of cell cycle;2.93330347694537e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.98836504972286e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.32305844395033e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.6501183304318e-09!GO:0009144;purine nucleoside triphosphate metabolic process;3.6501183304318e-09!GO:0009141;nucleoside triphosphate metabolic process;3.97659891855763e-09!GO:0006915;apoptosis;4.13594658645657e-09!GO:0005788;endoplasmic reticulum lumen;4.64977107905401e-09!GO:0051169;nuclear transport;4.74843712689326e-09!GO:0044453;nuclear membrane part;5.46407550123105e-09!GO:0048523;negative regulation of cellular process;7.79847784286977e-09!GO:0015986;ATP synthesis coupled proton transport;8.17665082500783e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.17665082500783e-09!GO:0009056;catabolic process;1.26055916737497e-08!GO:0006260;DNA replication;1.27314834523074e-08!GO:0006464;protein modification process;1.32656451170972e-08!GO:0008219;cell death;1.44256098069917e-08!GO:0016265;death;1.44256098069917e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.44256098069917e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.44256098069917e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.44256098069917e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.57401053336527e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.57401053336527e-08!GO:0000087;M phase of mitotic cell cycle;1.78911503066566e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.90576186387341e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.90576186387341e-08!GO:0008565;protein transporter activity;1.93238734263325e-08!GO:0051276;chromosome organization and biogenesis;1.99392907340191e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.05986859077869e-08!GO:0043038;amino acid activation;2.16356321031897e-08!GO:0006418;tRNA aminoacylation for protein translation;2.16356321031897e-08!GO:0043039;tRNA aminoacylation;2.16356321031897e-08!GO:0009060;aerobic respiration;2.16930335196098e-08!GO:0009117;nucleotide metabolic process;2.7478392048138e-08!GO:0007067;mitosis;2.7478392048138e-08!GO:0046034;ATP metabolic process;2.99701393857487e-08!GO:0051188;cofactor biosynthetic process;3.51278339230021e-08!GO:0006364;rRNA processing;4.22935688092515e-08!GO:0019829;cation-transporting ATPase activity;4.45169960897278e-08!GO:0016787;hydrolase activity;5.724892420438e-08!GO:0016072;rRNA metabolic process;5.99721082375276e-08!GO:0045333;cellular respiration;6.11312459839491e-08!GO:0030120;vesicle coat;6.33934782364963e-08!GO:0030662;coated vesicle membrane;6.33934782364963e-08!GO:0004386;helicase activity;6.36767629186861e-08!GO:0017038;protein import;1.29650822061275e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.3054889949448e-07!GO:0006754;ATP biosynthetic process;1.353664361661e-07!GO:0006753;nucleoside phosphate metabolic process;1.353664361661e-07!GO:0008639;small protein conjugating enzyme activity;1.43281101497863e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.54820393924138e-07!GO:0044431;Golgi apparatus part;1.5983798967322e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.61643806314417e-07!GO:0008026;ATP-dependent helicase activity;1.62411459747349e-07!GO:0051187;cofactor catabolic process;1.66114530616351e-07!GO:0016607;nuclear speck;1.9105872272177e-07!GO:0005768;endosome;1.97609770809473e-07!GO:0022403;cell cycle phase;2.03700499123345e-07!GO:0006461;protein complex assembly;2.17581145826427e-07!GO:0004842;ubiquitin-protein ligase activity;2.39724522969213e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.7436338568606e-07!GO:0006099;tricarboxylic acid cycle;3.0183191443055e-07!GO:0046356;acetyl-CoA catabolic process;3.0183191443055e-07!GO:0065002;intracellular protein transport across a membrane;3.13956375448243e-07!GO:0003924;GTPase activity;3.13956375448243e-07!GO:0019787;small conjugating protein ligase activity;3.42628567349173e-07!GO:0006323;DNA packaging;3.58117682050223e-07!GO:0048519;negative regulation of biological process;3.85902927808291e-07!GO:0006366;transcription from RNA polymerase II promoter;3.92068002844829e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.17205544615007e-07!GO:0043566;structure-specific DNA binding;4.26202094642747e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.852404259399e-07!GO:0051246;regulation of protein metabolic process;5.07129343576645e-07!GO:0009109;coenzyme catabolic process;6.37674982933215e-07!GO:0048475;coated membrane;7.6405464929723e-07!GO:0030117;membrane coat;7.6405464929723e-07!GO:0007005;mitochondrion organization and biogenesis;8.64627096963713e-07!GO:0005643;nuclear pore;8.83024743787101e-07!GO:0016853;isomerase activity;8.86075660417741e-07!GO:0065004;protein-DNA complex assembly;9.12485788893503e-07!GO:0003697;single-stranded DNA binding;9.24298053440623e-07!GO:0009108;coenzyme biosynthetic process;9.65368687059538e-07!GO:0051301;cell division;9.84146646919749e-07!GO:0006084;acetyl-CoA metabolic process;1.02113532370209e-06!GO:0043687;post-translational protein modification;1.09064175497468e-06!GO:0006091;generation of precursor metabolites and energy;1.40073063190507e-06!GO:0016881;acid-amino acid ligase activity;2.17751087260876e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.36140824299265e-06!GO:0004298;threonine endopeptidase activity;2.43128252521019e-06!GO:0006333;chromatin assembly or disassembly;2.67579614475695e-06!GO:0045259;proton-transporting ATP synthase complex;2.8506792957702e-06!GO:0006752;group transfer coenzyme metabolic process;2.87446687846828e-06!GO:0005762;mitochondrial large ribosomal subunit;3.29097536612669e-06!GO:0000315;organellar large ribosomal subunit;3.29097536612669e-06!GO:0000139;Golgi membrane;3.44139839643308e-06!GO:0000785;chromatin;3.83284785022583e-06!GO:0044440;endosomal part;3.85558970360768e-06!GO:0010008;endosome membrane;3.85558970360768e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.97689322152665e-06!GO:0046930;pore complex;4.34227164300791e-06!GO:0005770;late endosome;4.34957347616946e-06!GO:0003714;transcription corepressor activity;4.60809784202936e-06!GO:0042981;regulation of apoptosis;4.95955806674586e-06!GO:0045786;negative regulation of progression through cell cycle;6.18635136545935e-06!GO:0005773;vacuole;6.31341246600321e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.35797734410342e-06!GO:0016779;nucleotidyltransferase activity;6.67413926109733e-06!GO:0043067;regulation of programmed cell death;6.7429247041726e-06!GO:0000279;M phase;6.94078005993439e-06!GO:0006403;RNA localization;7.27692661116964e-06!GO:0000245;spliceosome assembly;7.61863218025595e-06!GO:0045454;cell redox homeostasis;8.49414923816194e-06!GO:0015630;microtubule cytoskeleton;8.49414923816194e-06!GO:0050657;nucleic acid transport;9.49046393953961e-06!GO:0051236;establishment of RNA localization;9.49046393953961e-06!GO:0050658;RNA transport;9.49046393953961e-06!GO:0008654;phospholipid biosynthetic process;9.83869565269332e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.1151651652334e-05!GO:0005813;centrosome;1.30222598212975e-05!GO:0043069;negative regulation of programmed cell death;1.59575327632012e-05!GO:0006613;cotranslational protein targeting to membrane;1.70476182162775e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.82168555936976e-05!GO:0043066;negative regulation of apoptosis;1.90913314041917e-05!GO:0051170;nuclear import;2.16089855136551e-05!GO:0031324;negative regulation of cellular metabolic process;2.19890151014769e-05!GO:0016859;cis-trans isomerase activity;2.26642771705893e-05!GO:0031252;leading edge;2.4796073227928e-05!GO:0031988;membrane-bound vesicle;2.60684830971664e-05!GO:0005667;transcription factor complex;2.64325475983141e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.64589935551897e-05!GO:0006916;anti-apoptosis;2.85850938741472e-05!GO:0050794;regulation of cellular process;2.88061999829862e-05!GO:0016740;transferase activity;3.21854610099189e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.54377990919361e-05!GO:0005815;microtubule organizing center;3.8039642357173e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.92342210531347e-05!GO:0016564;transcription repressor activity;4.03938632612229e-05!GO:0006606;protein import into nucleus;4.79202810658466e-05!GO:0000323;lytic vacuole;4.79202810658466e-05!GO:0005764;lysosome;4.79202810658466e-05!GO:0008361;regulation of cell size;4.81579242493016e-05!GO:0006334;nucleosome assembly;4.88930873080803e-05!GO:0016049;cell growth;5.25285191758003e-05!GO:0009165;nucleotide biosynthetic process;5.45653008476552e-05!GO:0043021;ribonucleoprotein binding;5.45653008476552e-05!GO:0033116;ER-Golgi intermediate compartment membrane;6.91050980943871e-05!GO:0001558;regulation of cell growth;6.97675173641882e-05!GO:0003899;DNA-directed RNA polymerase activity;6.97675173641882e-05!GO:0030867;rough endoplasmic reticulum membrane;7.00492383576068e-05!GO:0005525;GTP binding;7.39321977680137e-05!GO:0005798;Golgi-associated vesicle;7.39321977680137e-05!GO:0032446;protein modification by small protein conjugation;7.73282343005309e-05!GO:0031497;chromatin assembly;8.78410083281878e-05!GO:0000314;organellar small ribosomal subunit;9.89307549733078e-05!GO:0005763;mitochondrial small ribosomal subunit;9.89307549733078e-05!GO:0016567;protein ubiquitination;0.000127898549827892!GO:0006612;protein targeting to membrane;0.000127898549827892!GO:0003724;RNA helicase activity;0.000128768514208805!GO:0051028;mRNA transport;0.000134518640746821!GO:0015980;energy derivation by oxidation of organic compounds;0.000135296995711267!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000153183249847132!GO:0009892;negative regulation of metabolic process;0.00017019096745394!GO:0051789;response to protein stimulus;0.000188412439933294!GO:0006986;response to unfolded protein;0.000188412439933294!GO:0031982;vesicle;0.00019946464273303!GO:0005769;early endosome;0.000202709667418888!GO:0016568;chromatin modification;0.000208452580943304!GO:0043623;cellular protein complex assembly;0.000209673507389021!GO:0019867;outer membrane;0.000212423494424988!GO:0031410;cytoplasmic vesicle;0.000234497585845874!GO:0005048;signal sequence binding;0.000253804726226402!GO:0006793;phosphorus metabolic process;0.000275081600321266!GO:0006796;phosphate metabolic process;0.000275081600321266!GO:0016563;transcription activator activity;0.000292081009300286!GO:0031968;organelle outer membrane;0.000292425586146493!GO:0000151;ubiquitin ligase complex;0.000292425586146493!GO:0003713;transcription coactivator activity;0.000293534959840917!GO:0051427;hormone receptor binding;0.000294992325780226!GO:0046474;glycerophospholipid biosynthetic process;0.000315326442265814!GO:0005791;rough endoplasmic reticulum;0.000335922715246059!GO:0006261;DNA-dependent DNA replication;0.000350438185271873!GO:0008610;lipid biosynthetic process;0.000360757911370002!GO:0008250;oligosaccharyl transferase complex;0.000361760026157829!GO:0005905;coated pit;0.00036450493801717!GO:0032561;guanyl ribonucleotide binding;0.00039498389430955!GO:0019001;guanyl nucleotide binding;0.00039498389430955!GO:0030036;actin cytoskeleton organization and biogenesis;0.000405417328418124!GO:0004576;oligosaccharyl transferase activity;0.000430938074130206!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00044816917757375!GO:0030663;COPI coated vesicle membrane;0.00045672022315441!GO:0030126;COPI vesicle coat;0.00045672022315441!GO:0019752;carboxylic acid metabolic process;0.000474190950404836!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000497371720583303!GO:0019843;rRNA binding;0.000498142192134981!GO:0007050;cell cycle arrest;0.000508693922802109!GO:0016310;phosphorylation;0.000511861412764129!GO:0006082;organic acid metabolic process;0.000518807840931228!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000521233047279038!GO:0005885;Arp2/3 protein complex;0.00056871765341869!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000582343628632295!GO:0035257;nuclear hormone receptor binding;0.000585364460854563!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000636415360633947!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000688725281875838!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000744183077864276!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0007533748176084!GO:0006950;response to stress;0.000836149184268523!GO:0051920;peroxiredoxin activity;0.000845972534892221!GO:0016363;nuclear matrix;0.000863118438166789!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000904996649418785!GO:0018196;peptidyl-asparagine modification;0.000915313497978406!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000915313497978406!GO:0043681;protein import into mitochondrion;0.000924652887323822!GO:0006626;protein targeting to mitochondrion;0.000933596472031826!GO:0030133;transport vesicle;0.00093814608196005!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00093814608196005!GO:0008033;tRNA processing;0.00101793090059383!GO:0003690;double-stranded DNA binding;0.00102062422842911!GO:0016126;sterol biosynthetic process;0.00108847266676277!GO:0046489;phosphoinositide biosynthetic process;0.00110959183625667!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00114054894383923!GO:0015399;primary active transmembrane transporter activity;0.00114054894383923!GO:0006383;transcription from RNA polymerase III promoter;0.00118986487608503!GO:0051329;interphase of mitotic cell cycle;0.00119038626147593!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.001244999739259!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00129951622301854!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00129951622301854!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00129951622301854!GO:0048522;positive regulation of cellular process;0.00129951622301854!GO:0005741;mitochondrial outer membrane;0.00133164813509965!GO:0016481;negative regulation of transcription;0.00141631463481831!GO:0006414;translational elongation;0.00145070709381205!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00153125797587578!GO:0030137;COPI-coated vesicle;0.00169843151038972!GO:0007006;mitochondrial membrane organization and biogenesis;0.0018885749472066!GO:0019899;enzyme binding;0.00190829209817106!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00191993994459278!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00191993994459278!GO:0008186;RNA-dependent ATPase activity;0.00193426676305507!GO:0005819;spindle;0.00193426676305507!GO:0044262;cellular carbohydrate metabolic process;0.00193426676305507!GO:0007010;cytoskeleton organization and biogenesis;0.00193994762786686!GO:0043284;biopolymer biosynthetic process;0.00210882550409635!GO:0030029;actin filament-based process;0.00221292843789354!GO:0007051;spindle organization and biogenesis;0.00222566619089552!GO:0048500;signal recognition particle;0.00223337704113259!GO:0051252;regulation of RNA metabolic process;0.00237409749106076!GO:0046483;heterocycle metabolic process;0.00258887057086138!GO:0050789;regulation of biological process;0.00272198554151976!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00274221780461971!GO:0048471;perinuclear region of cytoplasm;0.00311487732797381!GO:0031072;heat shock protein binding;0.00318423869631957!GO:0006839;mitochondrial transport;0.00336659236613926!GO:0005657;replication fork;0.00341371744151333!GO:0000775;chromosome, pericentric region;0.00341634013472779!GO:0030132;clathrin coat of coated pit;0.00365654643609534!GO:0046467;membrane lipid biosynthetic process;0.00375746432281926!GO:0015992;proton transport;0.00375746432281926!GO:0003729;mRNA binding;0.00380139666690759!GO:0006979;response to oxidative stress;0.00381830797027372!GO:0000096;sulfur amino acid metabolic process;0.00381830797027372!GO:0030176;integral to endoplasmic reticulum membrane;0.00384253099111184!GO:0008180;signalosome;0.00389333466728777!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00404606357629354!GO:0006818;hydrogen transport;0.00407874026654195!GO:0030134;ER to Golgi transport vesicle;0.0042951515156536!GO:0051168;nuclear export;0.0042951515156536!GO:0006497;protein amino acid lipidation;0.00443095596733708!GO:0030658;transport vesicle membrane;0.00457662769543547!GO:0016044;membrane organization and biogenesis;0.00459646988096036!GO:0000075;cell cycle checkpoint;0.00464330832881255!GO:0016197;endosome transport;0.00465533827845482!GO:0022890;inorganic cation transmembrane transporter activity;0.00474308018101321!GO:0004004;ATP-dependent RNA helicase activity;0.00477979119851602!GO:0050662;coenzyme binding;0.00481124514927967!GO:0015631;tubulin binding;0.00481580485573444!GO:0008168;methyltransferase activity;0.00494536673950335!GO:0051325;interphase;0.00506468214232037!GO:0040008;regulation of growth;0.00506468214232037!GO:0007243;protein kinase cascade;0.00506961510338559!GO:0042802;identical protein binding;0.00506961510338559!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00510224059293938!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00510224059293938!GO:0044452;nucleolar part;0.0052228211662955!GO:0004177;aminopeptidase activity;0.00554775154966225!GO:0016741;transferase activity, transferring one-carbon groups;0.00558329868636196!GO:0008632;apoptotic program;0.00559196511042182!GO:0006891;intra-Golgi vesicle-mediated transport;0.00559196511042182!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00559196511042182!GO:0045047;protein targeting to ER;0.00559196511042182!GO:0035258;steroid hormone receptor binding;0.00560865069286909!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00560865069286909!GO:0006740;NADPH regeneration;0.0056132092516526!GO:0006098;pentose-phosphate shunt;0.0056132092516526!GO:0030127;COPII vesicle coat;0.00563801742820534!GO:0012507;ER to Golgi transport vesicle membrane;0.00563801742820534!GO:0030880;RNA polymerase complex;0.00566797051150186!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0057321518558274!GO:0031901;early endosome membrane;0.0057321518558274!GO:0000786;nucleosome;0.00592398368262057!GO:0017166;vinculin binding;0.00604261217542625!GO:0006402;mRNA catabolic process;0.00615127761395948!GO:0048144;fibroblast proliferation;0.00619590193261516!GO:0048145;regulation of fibroblast proliferation;0.00619590193261516!GO:0008312;7S RNA binding;0.00634927468309969!GO:0005684;U2-dependent spliceosome;0.0067150673229523!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00673435560181425!GO:0015002;heme-copper terminal oxidase activity;0.00673435560181425!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00673435560181425!GO:0004129;cytochrome-c oxidase activity;0.00673435560181425!GO:0030027;lamellipodium;0.00676386334072825!GO:0006595;polyamine metabolic process;0.00684138611063558!GO:0051087;chaperone binding;0.0069866789037863!GO:0006118;electron transport;0.00709579031040072!GO:0051052;regulation of DNA metabolic process;0.00709684172139263!GO:0030145;manganese ion binding;0.00752657901582057!GO:0000049;tRNA binding;0.0075571665052627!GO:0016272;prefoldin complex;0.00758605117741687!GO:0043492;ATPase activity, coupled to movement of substances;0.00758605117741687!GO:0006695;cholesterol biosynthetic process;0.00772685411133604!GO:0003711;transcription elongation regulator activity;0.00803180604349034!GO:0006892;post-Golgi vesicle-mediated transport;0.00810284795037092!GO:0006520;amino acid metabolic process;0.00817084365431426!GO:0000059;protein import into nucleus, docking;0.00827617191024308!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00848073980935355!GO:0008047;enzyme activator activity;0.00856903018606294!GO:0009116;nucleoside metabolic process;0.00862047554104368!GO:0048146;positive regulation of fibroblast proliferation;0.00866960104893713!GO:0006302;double-strand break repair;0.00873001714691516!GO:0042158;lipoprotein biosynthetic process;0.00873001714691516!GO:0006509;membrane protein ectodomain proteolysis;0.00873001714691516!GO:0033619;membrane protein proteolysis;0.00873001714691516!GO:0000339;RNA cap binding;0.00875861132448823!GO:0008094;DNA-dependent ATPase activity;0.00877318276598557!GO:0009112;nucleobase metabolic process;0.00880994698360418!GO:0051287;NAD binding;0.00896656899200911!GO:0031902;late endosome membrane;0.00902635343847116!GO:0043488;regulation of mRNA stability;0.00904041271420115!GO:0043487;regulation of RNA stability;0.00904041271420115!GO:0030659;cytoplasmic vesicle membrane;0.00961411541923964!GO:0003678;DNA helicase activity;0.00967847369555085!GO:0005869;dynactin complex;0.00991298908171257!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00991386535631403!GO:0022408;negative regulation of cell-cell adhesion;0.00993716547823101!GO:0005586;collagen type III;0.0101713544395627!GO:0003746;translation elongation factor activity;0.0102514270974127!GO:0016860;intramolecular oxidoreductase activity;0.0102550154108636!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0106499023633624!GO:0043022;ribosome binding;0.0106529482363223!GO:0006506;GPI anchor biosynthetic process;0.010659087300425!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0107838284220468!GO:0030660;Golgi-associated vesicle membrane;0.0108130877154553!GO:0019222;regulation of metabolic process;0.0109412096774781!GO:0030118;clathrin coat;0.0109438032478741!GO:0000776;kinetochore;0.0109569049600823!GO:0003684;damaged DNA binding;0.0109926558446002!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0111175773031461!GO:0008092;cytoskeletal protein binding;0.0111313638701477!GO:0001726;ruffle;0.0111805457032687!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0115869600279105!GO:0006289;nucleotide-excision repair;0.0116224040600767!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0117746897588732!GO:0000428;DNA-directed RNA polymerase complex;0.0117746897588732!GO:0030521;androgen receptor signaling pathway;0.011907358571992!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.011912713369215!GO:0065009;regulation of a molecular function;0.0119551894166131!GO:0048037;cofactor binding;0.012301284657497!GO:0016251;general RNA polymerase II transcription factor activity;0.0123933783512762!GO:0007034;vacuolar transport;0.0127574182461403!GO:0031124;mRNA 3'-end processing;0.012884286283696!GO:0050681;androgen receptor binding;0.0132121862751438!GO:0048487;beta-tubulin binding;0.0134860533995068!GO:0008243;plasminogen activator activity;0.0136200626069872!GO:0016408;C-acyltransferase activity;0.0143944618148381!GO:0006505;GPI anchor metabolic process;0.0144019187170607!GO:0048518;positive regulation of biological process;0.0147896065105351!GO:0031529;ruffle organization and biogenesis;0.0149763844993368!GO:0006401;RNA catabolic process;0.0149763844993368!GO:0008139;nuclear localization sequence binding;0.0149763844993368!GO:0008652;amino acid biosynthetic process;0.015014257512119!GO:0051128;regulation of cellular component organization and biogenesis;0.015144816619323!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0155845187686824!GO:0006275;regulation of DNA replication;0.0160389560952912!GO:0006790;sulfur metabolic process;0.016288876359057!GO:0005832;chaperonin-containing T-complex;0.0171546871951549!GO:0051539;4 iron, 4 sulfur cluster binding;0.0174496457565238!GO:0006650;glycerophospholipid metabolic process;0.0179186065876208!GO:0005637;nuclear inner membrane;0.0180237083122605!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0180237083122605!GO:0045045;secretory pathway;0.0180237083122605!GO:0006778;porphyrin metabolic process;0.0182102351156211!GO:0033013;tetrapyrrole metabolic process;0.0182102351156211!GO:0001953;negative regulation of cell-matrix adhesion;0.0182102351156211!GO:0006007;glucose catabolic process;0.0183710445086882!GO:0007021;tubulin folding;0.0184673493416091!GO:0006354;RNA elongation;0.0186914395543134!GO:0045792;negative regulation of cell size;0.0187370123909381!GO:0030308;negative regulation of cell growth;0.0188446081685123!GO:0005583;fibrillar collagen;0.0188707721636344!GO:0003682;chromatin binding;0.0189986889207087!GO:0003756;protein disulfide isomerase activity;0.0192805856371925!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0192805856371925!GO:0005862;muscle thin filament tropomyosin;0.0196428476997179!GO:0001527;microfibril;0.0199964563943578!GO:0008154;actin polymerization and/or depolymerization;0.0202587145828803!GO:0030384;phosphoinositide metabolic process;0.02037654560633!GO:0032984;macromolecular complex disassembly;0.0205793397027607!GO:0000082;G1/S transition of mitotic cell cycle;0.020857465698903!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.020857465698903!GO:0007052;mitotic spindle organization and biogenesis;0.020857465698903!GO:0044433;cytoplasmic vesicle part;0.0211012780977326!GO:0035035;histone acetyltransferase binding;0.0212234894386345!GO:0004527;exonuclease activity;0.0214502108906606!GO:0007040;lysosome organization and biogenesis;0.0220961294299889!GO:0006769;nicotinamide metabolic process;0.0222830014053862!GO:0000209;protein polyubiquitination;0.022372461573666!GO:0006352;transcription initiation;0.022372461573666!GO:0042168;heme metabolic process;0.0224089449473045!GO:0008022;protein C-terminus binding;0.0228753260362118!GO:0004287;prolyl oligopeptidase activity;0.0238112121044636!GO:0043433;negative regulation of transcription factor activity;0.0238112121044636!GO:0030125;clathrin vesicle coat;0.0240561690837008!GO:0030665;clathrin coated vesicle membrane;0.0240561690837008!GO:0030508;thiol-disulfide exchange intermediate activity;0.0240759789615102!GO:0006378;mRNA polyadenylation;0.0244562117483722!GO:0030032;lamellipodium biogenesis;0.0249918782861491!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0252417109553287!GO:0006739;NADP metabolic process;0.0253437086023039!GO:0051271;negative regulation of cell motility;0.0259153944528966!GO:0047485;protein N-terminus binding;0.0272773003101406!GO:0005669;transcription factor TFIID complex;0.0273433214858495!GO:0031371;ubiquitin conjugating enzyme complex;0.0273484674265594!GO:0009967;positive regulation of signal transduction;0.0277998277635261!GO:0051270;regulation of cell motility;0.0280245813632174!GO:0005758;mitochondrial intermembrane space;0.0295920661758863!GO:0000097;sulfur amino acid biosynthetic process;0.0296087685178765!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0301870808850379!GO:0006417;regulation of translation;0.030398645280638!GO:0033673;negative regulation of kinase activity;0.030632118497726!GO:0006469;negative regulation of protein kinase activity;0.030632118497726!GO:0001872;zymosan binding;0.0307412778001013!GO:0001878;response to yeast;0.0307412778001013!GO:0031543;peptidyl-proline dioxygenase activity;0.031058672410248!GO:0015036;disulfide oxidoreductase activity;0.0316590895567153!GO:0030041;actin filament polymerization;0.0320868198746136!GO:0043065;positive regulation of apoptosis;0.0324293825464807!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0336603733385039!GO:0046519;sphingoid metabolic process;0.0337733563512601!GO:0006144;purine base metabolic process;0.0339470897173887!GO:0005801;cis-Golgi network;0.0342050848752249!GO:0051348;negative regulation of transferase activity;0.0345490706115444!GO:0012506;vesicle membrane;0.0346201614978099!GO:0050811;GABA receptor binding;0.0349540708327307!GO:0019798;procollagen-proline dioxygenase activity;0.0355163115999047!GO:0005096;GTPase activator activity;0.0357071362127614!GO:0008147;structural constituent of bone;0.036331606243077!GO:0043241;protein complex disassembly;0.0364196923130312!GO:0006310;DNA recombination;0.0369088144500786!GO:0045941;positive regulation of transcription;0.0377359854485269!GO:0030518;steroid hormone receptor signaling pathway;0.0380722586476512!GO:0006693;prostaglandin metabolic process;0.0387998908685457!GO:0006692;prostanoid metabolic process;0.0387998908685457!GO:0003923;GPI-anchor transamidase activity;0.0389060657077823!GO:0016255;attachment of GPI anchor to protein;0.0389060657077823!GO:0042765;GPI-anchor transamidase complex;0.0389060657077823!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0399171060194733!GO:0005774;vacuolar membrane;0.0403170693492695!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0409740630901827!GO:0019206;nucleoside kinase activity;0.0410060701051547!GO:0043068;positive regulation of programmed cell death;0.0415458178920827!GO:0009081;branched chain family amino acid metabolic process;0.0419692125591977!GO:0008234;cysteine-type peptidase activity;0.042387066310414!GO:0031123;RNA 3'-end processing;0.0429117940640481!GO:0008538;proteasome activator activity;0.0429796016623077!GO:0030119;AP-type membrane coat adaptor complex;0.0437813786606575!GO:0007033;vacuole organization and biogenesis;0.0441287130827044!GO:0030911;TPR domain binding;0.0441513898419756!GO:0043414;biopolymer methylation;0.0444088791060905!GO:0016125;sterol metabolic process;0.0446462532506717!GO:0006733;oxidoreduction coenzyme metabolic process;0.0446462532506717!GO:0009119;ribonucleoside metabolic process;0.0448948342320282!GO:0009303;rRNA transcription;0.0450229910034001!GO:0043624;cellular protein complex disassembly;0.045458680669173!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0458895925449892!GO:0016407;acetyltransferase activity;0.0459348141811418!GO:0007041;lysosomal transport;0.0460591858898541!GO:0006368;RNA elongation from RNA polymerase II promoter;0.046187887839201!GO:0001952;regulation of cell-matrix adhesion;0.0463169397989812!GO:0045892;negative regulation of transcription, DNA-dependent;0.0464318252726711!GO:0007030;Golgi organization and biogenesis;0.0464862698741543!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0473541646684445!GO:0004448;isocitrate dehydrogenase activity;0.0476860830655971!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0489934329928864!GO:0042157;lipoprotein metabolic process;0.0490723658539671!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0490723658539671!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0490723658539671!GO:0006672;ceramide metabolic process;0.0490723658539671!GO:0006376;mRNA splice site selection;0.0490723658539671!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0490723658539671!GO:0009225;nucleotide-sugar metabolic process;0.0492045182079539!GO:0006767;water-soluble vitamin metabolic process;0.0492045182079539!GO:0006807;nitrogen compound metabolic process;0.049292854562061!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0493362653888786!GO:0048468;cell development;0.0497364960529473 | |||
|sample_id=11749 | |sample_id=11749 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=adipose tissue | |sample_tissue=adipose tissue | ||
|top_motifs=ALX4:1.56861303494;EN1,2:1.52438826779;HOX{A5,B5}:1.40539437554;GZF1:1.35735976835;HOX{A4,D4}:1.31045526668;PAX8:1.28347621413;TAL1_TCF{3,4,12}:1.25070304732;FOX{I1,J2}:1.21894645668;GFI1B:1.11639466296;UFEwm:1.08289891581;IKZF1:1.07651640029;XBP1:1.04472739086;ZNF238:0.994547303023;PAX4:0.990441355111;MYBL2:0.897815858827;NFE2L2:0.871131911529;KLF4:0.867112380132;FOXQ1:0.822187795301;PAX1,9:0.812250798109;NKX3-2:0.799888499641;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.7859768372;NFE2L1:0.760319266343;SPZ1:0.754741588504;GLI1..3:0.739230112117;RXR{A,B,G}:0.735810183455;GCM1,2:0.730600380934;HIF1A:0.691805410181;TLX1..3_NFIC{dimer}:0.688838308633;NR3C1:0.673012753408;RFX1:0.669027669627;RXRA_VDR{dimer}:0.646946213655;HES1:0.628648211052;NFIX:0.603243665916;ESR1:0.583994190228;PRDM1:0.582045139103;HLF:0.580238941509;ATF6:0.578674518592;POU3F1..4:0.575000927793;TEAD1:0.574389311174;AR:0.553984677217;SRF:0.54727503116;YY1:0.540739394702;EBF1:0.539479370379;CDC5L:0.538438486511;TFCP2:0.532154358653;HSF1,2:0.525411480233;SOX17:0.512878220331;ZNF423:0.491023524436;NR6A1:0.471571990132;NFATC1..3:0.4405017822;NKX3-1:0.439850962558;STAT2,4,6:0.436602666976;NKX2-2,8:0.428763730549;ARID5B:0.426277880458;GTF2I:0.411233243846;FOS_FOS{B,L1}_JUN{B,D}:0.360284984603;EVI1:0.350214397974;HAND1,2:0.340342777619;DBP:0.333712378669;GFI1:0.328470360625;ZNF384:0.315175090475;BACH2:0.308579369447;TFAP4:0.305777518921;NANOG{mouse}:0.294124574894;TBP:0.293775798971;POU6F1:0.270863360972;TP53:0.257520097461;HBP1_HMGB_SSRP1_UBTF:0.250290632092;EP300:0.234671386948;AHR_ARNT_ARNT2:0.230518276475;MYB:0.223793898763;TBX4,5:0.223531298044;bHLH_family:0.207771500699;LHX3,4:0.204103802265;ZBTB16:0.170085231166;ALX1:0.168985056357;TEF:0.161529365239;ZBTB6:0.139925301093;MZF1:0.105869627153;ZIC1..3:0.0922433612851;FOXO1,3,4:0.0702677460125;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0654054025926;GATA4:0.0638093789001;RUNX1..3:0.063769965432;ELK1,4_GABP{A,B1}:0.0619815933893;NFE2:0.0597808037382;NRF1:0.0537973328676;MAFB:0.0527858684334;AIRE:0.0431130465594;ZNF148:0.0340188028343;HMX1:0.0227578686621;FOSL2:0.00124295982003;PAX2:-0.00803149238013;NKX2-1,4:-0.012769094931;CEBPA,B_DDIT3:-0.0130518763369;MYFfamily:-0.0337670648027;ZNF143:-0.0392491745196;ATF2:-0.0396528999929;DMAP1_NCOR{1,2}_SMARC:-0.0422750429443;PATZ1:-0.0529978478559;NR5A1,2:-0.0599281303345;E2F1..5:-0.080285301045;STAT1,3:-0.10543574975;RREB1:-0.108977870626;HNF1A:-0.109610759662;HOXA9_MEIS1:-0.11081088714;ELF1,2,4:-0.122553247148;NKX6-1,2:-0.141859229208;RFX2..5_RFXANK_RFXAP:-0.159807350516;SMAD1..7,9:-0.162594961133;VSX1,2:-0.171137085484;IRF1,2:-0.176840063124;NKX2-3_NKX2-5:-0.187337478937;STAT5{A,B}:-0.205597857727;FOXM1:-0.208317383262;XCPE1{core}:-0.253271478686;MEF2{A,B,C,D}:-0.254015942053;NHLH1,2:-0.260863092975;ONECUT1,2:-0.265379427174;ESRRA:-0.26735575436;TLX2:-0.281671156419;PRRX1,2:-0.283574462363;NFIL3:-0.29824639402;CREB1:-0.30446435691;FOXN1:-0.334062518222;MTE{core}:-0.338337584463;REST:-0.33907053811;LEF1_TCF7_TCF7L1,2:-0.350179601755;TGIF1:-0.351612283965;HNF4A_NR2F1,2:-0.356386957714;ATF5_CREB3:-0.38126827069;IRF7:-0.386002292209;FOXL1:-0.390967491178;SPI1:-0.402359900506;GTF2A1,2:-0.408843770444;NANOG:-0.414949717587;NFKB1_REL_RELA:-0.417823154499;MAZ:-0.423191253248;TFAP2{A,C}:-0.462188555882;JUN:-0.464808247833;MED-1{core}:-0.477029344832;PAX3,7:-0.480539793881;ATF4:-0.487797437325;FOXD3:-0.496121320933;PAX5:-0.505684502828;HOX{A6,A7,B6,B7}:-0.512000098374;ADNP_IRX_SIX_ZHX:-0.51576230447;TOPORS:-0.520917631415;CDX1,2,4:-0.521626778359;PDX1:-0.53646106205;ZFP161:-0.539234309277;ETS1,2:-0.539426049328;NR1H4:-0.548643585996;PAX6:-0.555311191892;GATA6:-0.558919400908;SOX2:-0.564299456688;POU5F1:-0.572785160968;BPTF:-0.573871079321;POU1F1:-0.575931892362;POU2F1..3:-0.581382305276;SPIB:-0.586985607568;SOX{8,9,10}:-0.588391873021;FOXA2:-0.594820085115;FOXP3:-0.598607128331;PBX1:-0.605787082297;LMO2:-0.617449613728;EGR1..3:-0.627867186293;FOX{D1,D2}:-0.63686959748;SREBF1,2:-0.64341247161;SOX5:-0.655869292205;NFY{A,B,C}:-0.661518293745;TFAP2B:-0.675766190714;HIC1:-0.699943870561;HMGA1,2:-0.712470387881;MTF1:-0.755136240626;TFDP1:-0.76170974581;ZEB1:-0.824568438679;SNAI1..3:-0.835366898249;CUX2:-0.853512455794;CRX:-0.861226818037;RBPJ:-0.884457682095;PPARG:-0.946807195324;RORA:-0.952899131116;OCT4_SOX2{dimer}:-0.953732855089;FOXP1:-0.969732601124;SP1:-1.04093909509;T:-1.09954889372;IKZF2:-1.11276052085;MYOD1:-1.13109083758;BREu{core}:-1.17683694871;PITX1..3:-1.2126003996;FOX{F1,F2,J1}:-1.32643899451 | |top_motifs=ALX4:1.56861303494;EN1,2:1.52438826779;HOX{A5,B5}:1.40539437554;GZF1:1.35735976835;HOX{A4,D4}:1.31045526668;PAX8:1.28347621413;TAL1_TCF{3,4,12}:1.25070304732;FOX{I1,J2}:1.21894645668;GFI1B:1.11639466296;UFEwm:1.08289891581;IKZF1:1.07651640029;XBP1:1.04472739086;ZNF238:0.994547303023;PAX4:0.990441355111;MYBL2:0.897815858827;NFE2L2:0.871131911529;KLF4:0.867112380132;FOXQ1:0.822187795301;PAX1,9:0.812250798109;NKX3-2:0.799888499641;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.7859768372;NFE2L1:0.760319266343;SPZ1:0.754741588504;GLI1..3:0.739230112117;RXR{A,B,G}:0.735810183455;GCM1,2:0.730600380934;HIF1A:0.691805410181;TLX1..3_NFIC{dimer}:0.688838308633;NR3C1:0.673012753408;RFX1:0.669027669627;RXRA_VDR{dimer}:0.646946213655;HES1:0.628648211052;NFIX:0.603243665916;ESR1:0.583994190228;PRDM1:0.582045139103;HLF:0.580238941509;ATF6:0.578674518592;POU3F1..4:0.575000927793;TEAD1:0.574389311174;AR:0.553984677217;SRF:0.54727503116;YY1:0.540739394702;EBF1:0.539479370379;CDC5L:0.538438486511;TFCP2:0.532154358653;HSF1,2:0.525411480233;SOX17:0.512878220331;ZNF423:0.491023524436;NR6A1:0.471571990132;NFATC1..3:0.4405017822;NKX3-1:0.439850962558;STAT2,4,6:0.436602666976;NKX2-2,8:0.428763730549;ARID5B:0.426277880458;GTF2I:0.411233243846;FOS_FOS{B,L1}_JUN{B,D}:0.360284984603;EVI1:0.350214397974;HAND1,2:0.340342777619;DBP:0.333712378669;GFI1:0.328470360625;ZNF384:0.315175090475;BACH2:0.308579369447;TFAP4:0.305777518921;NANOG{mouse}:0.294124574894;TBP:0.293775798971;POU6F1:0.270863360972;TP53:0.257520097461;HBP1_HMGB_SSRP1_UBTF:0.250290632092;EP300:0.234671386948;AHR_ARNT_ARNT2:0.230518276475;MYB:0.223793898763;TBX4,5:0.223531298044;bHLH_family:0.207771500699;LHX3,4:0.204103802265;ZBTB16:0.170085231166;ALX1:0.168985056357;TEF:0.161529365239;ZBTB6:0.139925301093;MZF1:0.105869627153;ZIC1..3:0.0922433612851;FOXO1,3,4:0.0702677460125;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0654054025926;GATA4:0.0638093789001;RUNX1..3:0.063769965432;ELK1,4_GABP{A,B1}:0.0619815933893;NFE2:0.0597808037382;NRF1:0.0537973328676;MAFB:0.0527858684334;AIRE:0.0431130465594;ZNF148:0.0340188028343;HMX1:0.0227578686621;FOSL2:0.00124295982003;PAX2:-0.00803149238013;NKX2-1,4:-0.012769094931;CEBPA,B_DDIT3:-0.0130518763369;MYFfamily:-0.0337670648027;ZNF143:-0.0392491745196;ATF2:-0.0396528999929;DMAP1_NCOR{1,2}_SMARC:-0.0422750429443;PATZ1:-0.0529978478559;NR5A1,2:-0.0599281303345;E2F1..5:-0.080285301045;STAT1,3:-0.10543574975;RREB1:-0.108977870626;HNF1A:-0.109610759662;HOXA9_MEIS1:-0.11081088714;ELF1,2,4:-0.122553247148;NKX6-1,2:-0.141859229208;RFX2..5_RFXANK_RFXAP:-0.159807350516;SMAD1..7,9:-0.162594961133;VSX1,2:-0.171137085484;IRF1,2:-0.176840063124;NKX2-3_NKX2-5:-0.187337478937;STAT5{A,B}:-0.205597857727;FOXM1:-0.208317383262;XCPE1{core}:-0.253271478686;MEF2{A,B,C,D}:-0.254015942053;NHLH1,2:-0.260863092975;ONECUT1,2:-0.265379427174;ESRRA:-0.26735575436;TLX2:-0.281671156419;PRRX1,2:-0.283574462363;NFIL3:-0.29824639402;CREB1:-0.30446435691;FOXN1:-0.334062518222;MTE{core}:-0.338337584463;REST:-0.33907053811;LEF1_TCF7_TCF7L1,2:-0.350179601755;TGIF1:-0.351612283965;HNF4A_NR2F1,2:-0.356386957714;ATF5_CREB3:-0.38126827069;IRF7:-0.386002292209;FOXL1:-0.390967491178;SPI1:-0.402359900506;GTF2A1,2:-0.408843770444;NANOG:-0.414949717587;NFKB1_REL_RELA:-0.417823154499;MAZ:-0.423191253248;TFAP2{A,C}:-0.462188555882;JUN:-0.464808247833;MED-1{core}:-0.477029344832;PAX3,7:-0.480539793881;ATF4:-0.487797437325;FOXD3:-0.496121320933;PAX5:-0.505684502828;HOX{A6,A7,B6,B7}:-0.512000098374;ADNP_IRX_SIX_ZHX:-0.51576230447;TOPORS:-0.520917631415;CDX1,2,4:-0.521626778359;PDX1:-0.53646106205;ZFP161:-0.539234309277;ETS1,2:-0.539426049328;NR1H4:-0.548643585996;PAX6:-0.555311191892;GATA6:-0.558919400908;SOX2:-0.564299456688;POU5F1:-0.572785160968;BPTF:-0.573871079321;POU1F1:-0.575931892362;POU2F1..3:-0.581382305276;SPIB:-0.586985607568;SOX{8,9,10}:-0.588391873021;FOXA2:-0.594820085115;FOXP3:-0.598607128331;PBX1:-0.605787082297;LMO2:-0.617449613728;EGR1..3:-0.627867186293;FOX{D1,D2}:-0.63686959748;SREBF1,2:-0.64341247161;SOX5:-0.655869292205;NFY{A,B,C}:-0.661518293745;TFAP2B:-0.675766190714;HIC1:-0.699943870561;HMGA1,2:-0.712470387881;MTF1:-0.755136240626;TFDP1:-0.76170974581;ZEB1:-0.824568438679;SNAI1..3:-0.835366898249;CUX2:-0.853512455794;CRX:-0.861226818037;RBPJ:-0.884457682095;PPARG:-0.946807195324;RORA:-0.952899131116;OCT4_SOX2{dimer}:-0.953732855089;FOXP1:-0.969732601124;SP1:-1.04093909509;T:-1.09954889372;IKZF2:-1.11276052085;MYOD1:-1.13109083758;BREu{core}:-1.17683694871;PITX1..3:-1.2126003996;FOX{F1,F2,J1}:-1.32643899451 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11749-123G3;search_select_hide=table117:FF:11749-123G3 | |||
}} | }} | ||
Latest revision as of 18:17, 4 June 2020
| Name: | mesenchymal precursor cell - adipose, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12365 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12365
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12365
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.101 |
| 10 | 10 | 0.12 |
| 100 | 100 | 0.886 |
| 101 | 101 | 0.988 |
| 102 | 102 | 0.0192 |
| 103 | 103 | 0.141 |
| 104 | 104 | 0.804 |
| 105 | 105 | 0.225 |
| 106 | 106 | 0.861 |
| 107 | 107 | 0.84 |
| 108 | 108 | 0.653 |
| 109 | 109 | 0.378 |
| 11 | 11 | 0.143 |
| 110 | 110 | 0.0204 |
| 111 | 111 | 0.787 |
| 112 | 112 | 0.0364 |
| 113 | 113 | 0.035 |
| 114 | 114 | 0.0638 |
| 115 | 115 | 0.714 |
| 116 | 116 | 0.105 |
| 117 | 117 | 0.138 |
| 118 | 118 | 0.806 |
| 119 | 119 | 0.836 |
| 12 | 12 | 0.781 |
| 120 | 120 | 0.135 |
| 121 | 121 | 0.734 |
| 122 | 122 | 0.0155 |
| 123 | 123 | 0.00529 |
| 124 | 124 | 0.407 |
| 125 | 125 | 0.966 |
| 126 | 126 | 0.641 |
| 127 | 127 | 0.849 |
| 128 | 128 | 0.757 |
| 129 | 129 | 0.8 |
| 13 | 13 | 0.125 |
| 130 | 130 | 0.727 |
| 131 | 131 | 0.401 |
| 132 | 132 | 0.941 |
| 133 | 133 | 0.36 |
| 134 | 134 | 0.419 |
| 135 | 135 | 0.871 |
| 136 | 136 | 0.457 |
| 137 | 137 | 0.93 |
| 138 | 138 | 0.774 |
| 139 | 139 | 0.492 |
| 14 | 14 | 0.229 |
| 140 | 140 | 0.846 |
| 141 | 141 | 0.529 |
| 142 | 142 | 0.378 |
| 143 | 143 | 0.567 |
| 144 | 144 | 0.625 |
| 145 | 145 | 0.805 |
| 146 | 146 | 0.499 |
| 147 | 147 | 0.0367 |
| 148 | 148 | 0.516 |
| 149 | 149 | 0.0262 |
| 15 | 15 | 0.398 |
| 150 | 150 | 0.563 |
| 151 | 151 | 0.776 |
| 152 | 152 | 0.834 |
| 153 | 153 | 0.45 |
| 154 | 154 | 0.873 |
| 155 | 155 | 0.00704 |
| 156 | 156 | 0.672 |
| 157 | 157 | 0.855 |
| 158 | 158 | 0.00691 |
| 159 | 159 | 0.0865 |
| 16 | 16 | 0.00478 |
| 160 | 160 | 0.306 |
| 161 | 161 | 0.758 |
| 162 | 162 | 0.787 |
| 163 | 163 | 0.314 |
| 164 | 164 | 0.0261 |
| 165 | 165 | 0.622 |
| 166 | 166 | 0.0609 |
| 167 | 167 | 0.662 |
| 168 | 168 | 0.667 |
| 169 | 169 | 0.00828 |
| 17 | 17 | 0.55 |
| 18 | 18 | 0.0568 |
| 19 | 19 | 0.0334 |
| 2 | 2 | 0.394 |
| 20 | 20 | 0.266 |
| 21 | 21 | 0.187 |
| 22 | 22 | 0.213 |
| 23 | 23 | 0.272 |
| 24 | 24 | 0.705 |
| 25 | 25 | 0.817 |
| 26 | 26 | 0.213 |
| 27 | 27 | 0.267 |
| 28 | 28 | 0.254 |
| 29 | 29 | 0.0612 |
| 3 | 3 | 0.205 |
| 30 | 30 | 0.727 |
| 31 | 31 | 0.888 |
| 32 | 32 | 8.49958e-11 |
| 33 | 33 | 0.581 |
| 34 | 34 | 0.967 |
| 35 | 35 | 0.282 |
| 36 | 36 | 0.451 |
| 37 | 37 | 0.0601 |
| 38 | 38 | 0.889 |
| 39 | 39 | 0.161 |
| 4 | 4 | 0.307 |
| 40 | 40 | 0.572 |
| 41 | 41 | 0.987 |
| 42 | 42 | 0.713 |
| 43 | 43 | 0.207 |
| 44 | 44 | 0.672 |
| 45 | 45 | 0.858 |
| 46 | 46 | 0.122 |
| 47 | 47 | 0.581 |
| 48 | 48 | 0.471 |
| 49 | 49 | 0.787 |
| 5 | 5 | 0.466 |
| 50 | 50 | 0.555 |
| 51 | 51 | 0.482 |
| 52 | 52 | 0.87 |
| 53 | 53 | 0.0966 |
| 54 | 54 | 0.687 |
| 55 | 55 | 0.0748 |
| 56 | 56 | 0.999 |
| 57 | 57 | 0.741 |
| 58 | 58 | 0.728 |
| 59 | 59 | 0.117 |
| 6 | 6 | 0.146 |
| 60 | 60 | 0.733 |
| 61 | 61 | 0.922 |
| 62 | 62 | 0.3 |
| 63 | 63 | 0.319 |
| 64 | 64 | 0.657 |
| 65 | 65 | 0.501 |
| 66 | 66 | 0.721 |
| 67 | 67 | 0.598 |
| 68 | 68 | 0.644 |
| 69 | 69 | 0.532 |
| 7 | 7 | 0.569 |
| 70 | 70 | 0.228 |
| 71 | 71 | 0.00609 |
| 72 | 72 | 0.78 |
| 73 | 73 | 0.504 |
| 74 | 74 | 0.00781 |
| 75 | 75 | 0.139 |
| 76 | 76 | 0.674 |
| 77 | 77 | 0.0304 |
| 78 | 78 | 0.0915 |
| 79 | 79 | 0.0767 |
| 8 | 8 | 0.0101 |
| 80 | 80 | 0.869 |
| 81 | 81 | 0.277 |
| 82 | 82 | 0.308 |
| 83 | 83 | 0.677 |
| 84 | 84 | 0.782 |
| 85 | 85 | 0.229 |
| 86 | 86 | 0.37 |
| 87 | 87 | 0.352 |
| 88 | 88 | 0.489 |
| 89 | 89 | 0.0503 |
| 9 | 9 | 0.248 |
| 90 | 90 | 0.391 |
| 91 | 91 | 0.455 |
| 92 | 92 | 0.117 |
| 93 | 93 | 0.822 |
| 94 | 94 | 0.573 |
| 95 | 95 | 0.13 |
| 96 | 96 | 0.849 |
| 97 | 97 | 0.186 |
| 98 | 98 | 0.807 |
| 99 | 99 | 0.00827 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12365
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002570 (mesenchymal stem cell of adipose)
UBERON: Anatomy
0001013 (adipose tissue)
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000270 (mesenchymal precursor cell of adipose)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
