FF:11756-123H1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005641 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008555;DRR009427;DRZ000852;DRZ002237;DRZ012202;DRZ013587 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002119,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000273 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor1.CNhs12372.11756-123H1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor1.CNhs12372.11756-123H1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor1.CNhs12372.11756-123H1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor1.CNhs12372.11756-123H1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor1.CNhs12372.11756-123H1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11756-123H1 | |id=FF:11756-123H1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000273 | ||
|is_obsolete= | |||
|library_id=CNhs12372 | |||
|library_id_phase_based=2:CNhs12372 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11756 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11756 | |||
|name=mesenchymal precursor cell - ovarian cancer left ovary, donor1 | |name=mesenchymal precursor cell - ovarian cancer left ovary, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12372,LSID914,release011,COMPLETED | |profile_hcage=CNhs12372,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=37.8422 | |rna_weight_ug=37.8422 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.26588509186787e-227!GO:0005737;cytoplasm;4.08742258204172e-196!GO:0043226;organelle;3.17823094100563e-174!GO:0043229;intracellular organelle;9.52513469492441e-174!GO:0043231;intracellular membrane-bound organelle;2.89002476657473e-171!GO:0043227;membrane-bound organelle;5.22250518672556e-171!GO:0044444;cytoplasmic part;3.03408283052211e-138!GO:0044422;organelle part;4.62747716638209e-136!GO:0044446;intracellular organelle part;1.79100176604957e-134!GO:0032991;macromolecular complex;6.22069398214022e-90!GO:0005515;protein binding;1.65631334505527e-88!GO:0044238;primary metabolic process;1.78319959641154e-78!GO:0030529;ribonucleoprotein complex;7.9719518238201e-77!GO:0044237;cellular metabolic process;2.78895098118655e-76!GO:0043170;macromolecule metabolic process;5.21663898277547e-73!GO:0043233;organelle lumen;2.10421415457499e-64!GO:0031974;membrane-enclosed lumen;2.10421415457499e-64!GO:0044428;nuclear part;2.78785737226224e-64!GO:0005634;nucleus;3.32725212868417e-60!GO:0003723;RNA binding;3.36892109106001e-60!GO:0031090;organelle membrane;6.07513330588465e-54!GO:0005739;mitochondrion;4.06500499176219e-53!GO:0019538;protein metabolic process;2.04943114812275e-52!GO:0016043;cellular component organization and biogenesis;5.64924139062676e-50!GO:0044260;cellular macromolecule metabolic process;3.74345707254359e-46!GO:0044267;cellular protein metabolic process;5.44907404196542e-46!GO:0033036;macromolecule localization;9.93376980422387e-46!GO:0015031;protein transport;1.08223065574067e-45!GO:0043234;protein complex;3.22203478005185e-45!GO:0005840;ribosome;3.78542032167819e-45!GO:0006412;translation;6.63971540180389e-45!GO:0006396;RNA processing;1.50287771379854e-42!GO:0008104;protein localization;1.5543171614889e-42!GO:0045184;establishment of protein localization;1.81826565777323e-42!GO:0005829;cytosol;3.84085754061814e-42!GO:0003735;structural constituent of ribosome;1.23789511793181e-39!GO:0031981;nuclear lumen;4.07614584854469e-39!GO:0009058;biosynthetic process;2.94170493315972e-38!GO:0043283;biopolymer metabolic process;4.13681720183102e-38!GO:0044429;mitochondrial part;1.43248577394077e-37!GO:0031967;organelle envelope;2.23376149842003e-37!GO:0031975;envelope;5.55000891650598e-37!GO:0009059;macromolecule biosynthetic process;1.47617767647485e-36!GO:0046907;intracellular transport;2.53478465872513e-35!GO:0016071;mRNA metabolic process;1.69334733837696e-34!GO:0044249;cellular biosynthetic process;2.50934278767197e-34!GO:0033279;ribosomal subunit;2.60777978342941e-34!GO:0008380;RNA splicing;2.67765304765927e-34!GO:0010467;gene expression;4.53734447884054e-32!GO:0043228;non-membrane-bound organelle;1.14360167630436e-30!GO:0043232;intracellular non-membrane-bound organelle;1.14360167630436e-30!GO:0006996;organelle organization and biogenesis;1.29250174335e-30!GO:0006397;mRNA processing;1.29250174335e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.91848362972487e-30!GO:0006886;intracellular protein transport;5.47703604405234e-29!GO:0065003;macromolecular complex assembly;1.90200069348551e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.89718298693877e-27!GO:0005740;mitochondrial envelope;9.61129589812503e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.23679847167901e-25!GO:0022607;cellular component assembly;2.94178641236365e-25!GO:0005783;endoplasmic reticulum;3.61137795125295e-25!GO:0012505;endomembrane system;3.76585303693905e-25!GO:0031966;mitochondrial membrane;4.67990303873653e-24!GO:0005654;nucleoplasm;1.24901094635872e-23!GO:0005681;spliceosome;1.56732675220912e-23!GO:0019866;organelle inner membrane;2.52219015977823e-23!GO:0051641;cellular localization;5.87788816049788e-23!GO:0051649;establishment of cellular localization;6.96519181183661e-23!GO:0006259;DNA metabolic process;3.3798133120357e-22!GO:0044445;cytosolic part;8.16659905338254e-22!GO:0007049;cell cycle;9.77191612043891e-22!GO:0006119;oxidative phosphorylation;1.22529206220169e-21!GO:0006457;protein folding;1.50352353180306e-21!GO:0005743;mitochondrial inner membrane;1.81855988887311e-21!GO:0016462;pyrophosphatase activity;1.82665845071227e-21!GO:0000166;nucleotide binding;2.11446960458474e-21!GO:0005794;Golgi apparatus;2.26384814156681e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.29089409545281e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;3.63737312978934e-21!GO:0017111;nucleoside-triphosphatase activity;1.17358445931666e-20!GO:0044451;nucleoplasm part;4.30792851283982e-19!GO:0048770;pigment granule;4.96495738918461e-19!GO:0042470;melanosome;4.96495738918461e-19!GO:0044432;endoplasmic reticulum part;7.74151843773503e-19!GO:0044455;mitochondrial membrane part;1.15371601353764e-18!GO:0015934;large ribosomal subunit;1.68217770348855e-18!GO:0008134;transcription factor binding;3.71904000818684e-17!GO:0022618;protein-RNA complex assembly;5.63441953173151e-17!GO:0000502;proteasome complex (sensu Eukaryota);6.34145793420198e-17!GO:0015935;small ribosomal subunit;9.8655807001856e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.40821236907102e-16!GO:0043285;biopolymer catabolic process;5.23573881051568e-16!GO:0022402;cell cycle process;5.64587829128201e-16!GO:0005730;nucleolus;6.06457589835184e-16!GO:0019941;modification-dependent protein catabolic process;8.37576913132883e-16!GO:0043632;modification-dependent macromolecule catabolic process;8.37576913132883e-16!GO:0048193;Golgi vesicle transport;8.58941663644282e-16!GO:0005746;mitochondrial respiratory chain;1.02846847453873e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.0935132110923e-15!GO:0044257;cellular protein catabolic process;1.19658453563529e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.42320863888334e-15!GO:0006512;ubiquitin cycle;1.42597421945341e-15!GO:0030163;protein catabolic process;1.42597421945341e-15!GO:0032553;ribonucleotide binding;1.90960642220642e-15!GO:0032555;purine ribonucleotide binding;1.90960642220642e-15!GO:0016874;ligase activity;2.66480565877762e-15!GO:0044265;cellular macromolecule catabolic process;2.81034379471254e-15!GO:0017076;purine nucleotide binding;2.82017025496086e-15!GO:0009057;macromolecule catabolic process;5.79291345603642e-15!GO:0003676;nucleic acid binding;5.90433499908579e-15!GO:0051082;unfolded protein binding;6.88422399495708e-15!GO:0006605;protein targeting;9.36738029397963e-15!GO:0016192;vesicle-mediated transport;1.89870211541273e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.54681693495883e-14!GO:0003954;NADH dehydrogenase activity;2.54681693495883e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.54681693495883e-14!GO:0031980;mitochondrial lumen;3.51878958575284e-14!GO:0005759;mitochondrial matrix;3.51878958575284e-14!GO:0051186;cofactor metabolic process;4.34592704371958e-14!GO:0008135;translation factor activity, nucleic acid binding;5.86964973125462e-14!GO:0043412;biopolymer modification;6.4128318662757e-14!GO:0000278;mitotic cell cycle;1.15977823061381e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.63226366685132e-13!GO:0012501;programmed cell death;1.88650096652236e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.50174609334873e-13!GO:0006915;apoptosis;4.97464352171245e-13!GO:0005793;ER-Golgi intermediate compartment;5.7420126589521e-13!GO:0005789;endoplasmic reticulum membrane;7.30451468236736e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;1.02516343750231e-12!GO:0000375;RNA splicing, via transesterification reactions;1.02516343750231e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.02516343750231e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.44671114623018e-12!GO:0045271;respiratory chain complex I;1.44671114623018e-12!GO:0005747;mitochondrial respiratory chain complex I;1.44671114623018e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.44671114623018e-12!GO:0042773;ATP synthesis coupled electron transport;1.44671114623018e-12!GO:0006464;protein modification process;1.44671114623018e-12!GO:0044248;cellular catabolic process;1.4549220138381e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.57140781406381e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.57320423071414e-12!GO:0048523;negative regulation of cellular process;2.3787003979935e-12!GO:0006974;response to DNA damage stimulus;3.50676246837544e-12!GO:0005635;nuclear envelope;3.54847792868887e-12!GO:0016070;RNA metabolic process;3.54847792868887e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.09515278344489e-12!GO:0005761;mitochondrial ribosome;4.23037267898254e-12!GO:0000313;organellar ribosome;4.23037267898254e-12!GO:0008219;cell death;7.02289487440202e-12!GO:0016265;death;7.02289487440202e-12!GO:0005524;ATP binding;8.80276075479425e-12!GO:0032559;adenyl ribonucleotide binding;1.60888872798825e-11!GO:0009055;electron carrier activity;1.88423655865797e-11!GO:0000074;regulation of progression through cell cycle;1.88423655865797e-11!GO:0051726;regulation of cell cycle;2.42677648686617e-11!GO:0030554;adenyl nucleotide binding;3.06698119807142e-11!GO:0031965;nuclear membrane;3.14966933116362e-11!GO:0003743;translation initiation factor activity;4.39421458988779e-11!GO:0003712;transcription cofactor activity;4.4709959384543e-11!GO:0006732;coenzyme metabolic process;5.33048341452551e-11!GO:0042254;ribosome biogenesis and assembly;6.92450628350277e-11!GO:0009259;ribonucleotide metabolic process;7.75993419413378e-11!GO:0006413;translational initiation;9.52637490632852e-11!GO:0005694;chromosome;1.01633519617702e-10!GO:0048519;negative regulation of biological process;1.06153758924053e-10!GO:0016604;nuclear body;1.47073272011538e-10!GO:0006163;purine nucleotide metabolic process;2.03923386162222e-10!GO:0043687;post-translational protein modification;2.08608977718305e-10!GO:0051301;cell division;2.87871033183366e-10!GO:0044453;nuclear membrane part;3.24929872394886e-10!GO:0009150;purine ribonucleotide metabolic process;3.54593176908692e-10!GO:0006446;regulation of translational initiation;4.95458013631749e-10!GO:0000087;M phase of mitotic cell cycle;8.504668780762e-10!GO:0044427;chromosomal part;8.75943614321773e-10!GO:0005768;endosome;1.00986523998557e-09!GO:0006281;DNA repair;1.07091557646836e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.13554725118263e-09!GO:0008639;small protein conjugating enzyme activity;1.1991086761685e-09!GO:0051276;chromosome organization and biogenesis;1.20545290819732e-09!GO:0006164;purine nucleotide biosynthetic process;1.24851466581091e-09!GO:0007067;mitosis;1.31858487080339e-09!GO:0016887;ATPase activity;1.42839978485962e-09!GO:0044431;Golgi apparatus part;1.50169544481875e-09!GO:0042623;ATPase activity, coupled;1.50755095223554e-09!GO:0003924;GTPase activity;1.70698272200039e-09!GO:0009260;ribonucleotide biosynthetic process;1.71305219091878e-09!GO:0006913;nucleocytoplasmic transport;1.71710891938476e-09!GO:0050794;regulation of cellular process;1.85466847736758e-09!GO:0019787;small conjugating protein ligase activity;2.00735239980078e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.08359473371328e-09!GO:0004842;ubiquitin-protein ligase activity;2.13042460375428e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.81827969249161e-09!GO:0051169;nuclear transport;3.4325467940975e-09!GO:0009199;ribonucleoside triphosphate metabolic process;3.66934228075084e-09!GO:0043067;regulation of programmed cell death;4.25972951437834e-09!GO:0009141;nucleoside triphosphate metabolic process;4.53743401191175e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.17758920678357e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.28769552330649e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.52301015182351e-09!GO:0022403;cell cycle phase;5.56895743344753e-09!GO:0043069;negative regulation of programmed cell death;6.05890242073373e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;6.6181236423731e-09!GO:0042981;regulation of apoptosis;6.93277684908036e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.20010765712988e-09!GO:0009144;purine nucleoside triphosphate metabolic process;7.20010765712988e-09!GO:0009719;response to endogenous stimulus;9.6373087982413e-09!GO:0051246;regulation of protein metabolic process;1.10458698310922e-08!GO:0016607;nuclear speck;1.58603377324049e-08!GO:0005788;endoplasmic reticulum lumen;1.84828444691172e-08!GO:0008565;protein transporter activity;1.84828444691172e-08!GO:0043066;negative regulation of apoptosis;1.93380152884381e-08!GO:0015986;ATP synthesis coupled proton transport;1.96215745374183e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.96215745374183e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.96215745374183e-08!GO:0006260;DNA replication;2.0111494578499e-08!GO:0006323;DNA packaging;2.01823625656232e-08!GO:0006916;anti-apoptosis;2.05055952709033e-08!GO:0004386;helicase activity;2.08052548444327e-08!GO:0006461;protein complex assembly;2.21868277667613e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.30486435183846e-08!GO:0016881;acid-amino acid ligase activity;2.34105365587145e-08!GO:0030120;vesicle coat;2.42747448765098e-08!GO:0030662;coated vesicle membrane;2.42747448765098e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.15011737547573e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.15011737547573e-08!GO:0006366;transcription from RNA polymerase II promoter;3.64615498465758e-08!GO:0046034;ATP metabolic process;3.65570006040174e-08!GO:0009060;aerobic respiration;3.94238931715898e-08!GO:0031988;membrane-bound vesicle;4.05668119224215e-08!GO:0016023;cytoplasmic membrane-bound vesicle;4.63958102218902e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.94414355610871e-08!GO:0009056;catabolic process;6.05575865581688e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.25156778490723e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.25156778490723e-08!GO:0017038;protein import;6.92195107910955e-08!GO:0008026;ATP-dependent helicase activity;6.95873101762547e-08!GO:0019829;cation-transporting ATPase activity;7.62722785592967e-08!GO:0045333;cellular respiration;9.1883539301719e-08!GO:0006399;tRNA metabolic process;1.20764795816359e-07!GO:0000139;Golgi membrane;1.39488136787006e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.64102786430476e-07!GO:0005643;nuclear pore;1.64851666432474e-07!GO:0015630;microtubule cytoskeleton;1.98096708162122e-07!GO:0006754;ATP biosynthetic process;2.85687246896726e-07!GO:0006753;nucleoside phosphate metabolic process;2.85687246896726e-07!GO:0006099;tricarboxylic acid cycle;3.14764636917854e-07!GO:0046356;acetyl-CoA catabolic process;3.14764636917854e-07!GO:0031252;leading edge;4.00474798723689e-07!GO:0044440;endosomal part;4.1485895739762e-07!GO:0010008;endosome membrane;4.1485895739762e-07!GO:0006333;chromatin assembly or disassembly;4.19404057187168e-07!GO:0065002;intracellular protein transport across a membrane;4.71116628095641e-07!GO:0051188;cofactor biosynthetic process;4.71492360439213e-07!GO:0005525;GTP binding;4.94250420784821e-07!GO:0065004;protein-DNA complex assembly;5.34419292281898e-07!GO:0000785;chromatin;5.70460550472164e-07!GO:0048475;coated membrane;5.72509520688894e-07!GO:0030117;membrane coat;5.72509520688894e-07!GO:0031982;vesicle;5.94796718979462e-07!GO:0009117;nucleotide metabolic process;6.26992448768349e-07!GO:0006364;rRNA processing;6.37844471798316e-07!GO:0000279;M phase;6.50460089778176e-07!GO:0051187;cofactor catabolic process;6.74770566884455e-07!GO:0031410;cytoplasmic vesicle;8.91291607593584e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;9.11311936173108e-07!GO:0004812;aminoacyl-tRNA ligase activity;9.11311936173108e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;9.11311936173108e-07!GO:0016072;rRNA metabolic process;1.12457193262676e-06!GO:0007005;mitochondrion organization and biogenesis;1.15521632887767e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.28057601810615e-06!GO:0006084;acetyl-CoA metabolic process;1.29235817547947e-06!GO:0043038;amino acid activation;1.42519173297382e-06!GO:0006418;tRNA aminoacylation for protein translation;1.42519173297382e-06!GO:0043039;tRNA aminoacylation;1.42519173297382e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.63747453138476e-06!GO:0016787;hydrolase activity;1.66026713803003e-06!GO:0045786;negative regulation of progression through cell cycle;1.92111813067421e-06!GO:0006403;RNA localization;1.97560197138676e-06!GO:0032446;protein modification by small protein conjugation;2.00160884590151e-06!GO:0050789;regulation of biological process;2.00160884590151e-06!GO:0009109;coenzyme catabolic process;2.00262949446456e-06!GO:0005770;late endosome;2.13482239484911e-06!GO:0005798;Golgi-associated vesicle;2.14212586366726e-06!GO:0050657;nucleic acid transport;2.16604221975105e-06!GO:0051236;establishment of RNA localization;2.16604221975105e-06!GO:0050658;RNA transport;2.16604221975105e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.27995460460587e-06!GO:0006793;phosphorus metabolic process;2.5089342365898e-06!GO:0006796;phosphate metabolic process;2.5089342365898e-06!GO:0046930;pore complex;2.53179789556186e-06!GO:0000245;spliceosome assembly;2.9840456693273e-06!GO:0005769;early endosome;3.1247446219714e-06!GO:0016567;protein ubiquitination;3.38484597071188e-06!GO:0003714;transcription corepressor activity;3.67151553674844e-06!GO:0048522;positive regulation of cellular process;3.80973460912966e-06!GO:0030036;actin cytoskeleton organization and biogenesis;3.92693213869279e-06!GO:0003697;single-stranded DNA binding;4.26625272796863e-06!GO:0006613;cotranslational protein targeting to membrane;5.35076819566548e-06!GO:0045259;proton-transporting ATP synthase complex;5.47271826292058e-06!GO:0032561;guanyl ribonucleotide binding;5.57816321974291e-06!GO:0019001;guanyl nucleotide binding;5.57816321974291e-06!GO:0016740;transferase activity;5.8832734844344e-06!GO:0016491;oxidoreductase activity;6.16336124452517e-06!GO:0005667;transcription factor complex;6.5160244730008e-06!GO:0043566;structure-specific DNA binding;6.64524666021398e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.86245828514585e-06!GO:0051170;nuclear import;8.10332883691182e-06!GO:0031324;negative regulation of cellular metabolic process;8.28372548230393e-06!GO:0009108;coenzyme biosynthetic process;8.96078155999293e-06!GO:0004298;threonine endopeptidase activity;9.16904644659233e-06!GO:0016853;isomerase activity;9.56796221788063e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.01069871438441e-05!GO:0006752;group transfer coenzyme metabolic process;1.06207472614357e-05!GO:0016310;phosphorylation;1.11967454065226e-05!GO:0005813;centrosome;1.1973368078408e-05!GO:0007010;cytoskeleton organization and biogenesis;1.28907729075687e-05!GO:0007243;protein kinase cascade;1.32582304310119e-05!GO:0006334;nucleosome assembly;1.39716586085579e-05!GO:0006606;protein import into nucleus;1.56660833690519e-05!GO:0016564;transcription repressor activity;1.56669998721059e-05!GO:0045454;cell redox homeostasis;1.83109827479948e-05!GO:0003724;RNA helicase activity;1.87910495735435e-05!GO:0000151;ubiquitin ligase complex;1.94057663261237e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.94344133266948e-05!GO:0016563;transcription activator activity;2.21927172002999e-05!GO:0005773;vacuole;2.46580516996519e-05!GO:0016568;chromatin modification;2.54217344524244e-05!GO:0008654;phospholipid biosynthetic process;2.58386796585975e-05!GO:0030867;rough endoplasmic reticulum membrane;2.72439870729759e-05!GO:0003713;transcription coactivator activity;2.87041466358149e-05!GO:0005815;microtubule organizing center;3.05389786460699e-05!GO:0031497;chromatin assembly;3.62304527497598e-05!GO:0016859;cis-trans isomerase activity;3.81496780403068e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.31205889493513e-05!GO:0030029;actin filament-based process;4.39413427747537e-05!GO:0051028;mRNA transport;4.94791611718473e-05!GO:0006612;protein targeting to membrane;5.1996922947806e-05!GO:0051789;response to protein stimulus;5.52979984240414e-05!GO:0006986;response to unfolded protein;5.52979984240414e-05!GO:0009892;negative regulation of metabolic process;6.56936262808094e-05!GO:0043623;cellular protein complex assembly;6.57064288732816e-05!GO:0005762;mitochondrial large ribosomal subunit;6.82881341582006e-05!GO:0000315;organellar large ribosomal subunit;6.82881341582006e-05!GO:0031968;organelle outer membrane;7.39392893418258e-05!GO:0016779;nucleotidyltransferase activity;8.12806946499759e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.36641215010379e-05!GO:0030133;transport vesicle;8.41270769394141e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.41379542993397e-05!GO:0007264;small GTPase mediated signal transduction;9.62411725312734e-05!GO:0005819;spindle;0.000104679101419633!GO:0005905;coated pit;0.000117822687430522!GO:0051427;hormone receptor binding;0.000119582785856909!GO:0019867;outer membrane;0.000141328584379286!GO:0019899;enzyme binding;0.000145037826702272!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00016537490653538!GO:0005048;signal sequence binding;0.000183708882967379!GO:0000323;lytic vacuole;0.000191342807771124!GO:0005764;lysosome;0.000191342807771124!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000192612442476299!GO:0008361;regulation of cell size;0.000201502437279416!GO:0043021;ribonucleoprotein binding;0.000218899728030209!GO:0035257;nuclear hormone receptor binding;0.000253846067088238!GO:0008092;cytoskeletal protein binding;0.000254763415340571!GO:0005885;Arp2/3 protein complex;0.000254763415340571!GO:0015980;energy derivation by oxidation of organic compounds;0.000256996933419493!GO:0051329;interphase of mitotic cell cycle;0.000269934962372457!GO:0016049;cell growth;0.000270105329142935!GO:0006091;generation of precursor metabolites and energy;0.000274654376868803!GO:0005791;rough endoplasmic reticulum;0.000317903118960822!GO:0004576;oligosaccharyl transferase activity;0.000330394257512085!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000357694243228271!GO:0009165;nucleotide biosynthetic process;0.000368532142804328!GO:0006950;response to stress;0.000382820831110451!GO:0016044;membrane organization and biogenesis;0.000392090279042536!GO:0008250;oligosaccharyl transferase complex;0.000412630026850825!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000440719566096234!GO:0005741;mitochondrial outer membrane;0.000440719566096234!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000443414742405615!GO:0001726;ruffle;0.000480528777146138!GO:0016126;sterol biosynthetic process;0.000499246644849192!GO:0016481;negative regulation of transcription;0.000517143926938069!GO:0051325;interphase;0.000521296270497683!GO:0007051;spindle organization and biogenesis;0.000529094848512571!GO:0018196;peptidyl-asparagine modification;0.000536845993040361!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000536845993040361!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000585438322387844!GO:0008047;enzyme activator activity;0.000592531135009002!GO:0001558;regulation of cell growth;0.000630680075682712!GO:0008186;RNA-dependent ATPase activity;0.000647467138126377!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000722772440741938!GO:0048518;positive regulation of biological process;0.000722772440741938!GO:0016363;nuclear matrix;0.000752882077042705!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000831022718439049!GO:0030663;COPI coated vesicle membrane;0.000831022718439049!GO:0030126;COPI vesicle coat;0.000831022718439049!GO:0051920;peroxiredoxin activity;0.000858204509302304!GO:0048468;cell development;0.000887078931211812!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000906675626331358!GO:0030659;cytoplasmic vesicle membrane;0.000907191475382471!GO:0000075;cell cycle checkpoint;0.000911105223823482!GO:0065007;biological regulation;0.000968542257924915!GO:0003899;DNA-directed RNA polymerase activity;0.00105426008634765!GO:0000314;organellar small ribosomal subunit;0.00111381502783525!GO:0005763;mitochondrial small ribosomal subunit;0.00111381502783525!GO:0042802;identical protein binding;0.001160815293719!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00120047780091923!GO:0006261;DNA-dependent DNA replication;0.00132116527958754!GO:0009967;positive regulation of signal transduction;0.00135464065005262!GO:0048500;signal recognition particle;0.00140353852425944!GO:0016197;endosome transport;0.00141110115999862!GO:0065009;regulation of a molecular function;0.0014387712526884!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0014506714194861!GO:0031072;heat shock protein binding;0.00146183483836994!GO:0031901;early endosome membrane;0.00146913981430516!GO:0030658;transport vesicle membrane;0.00152910073276482!GO:0004004;ATP-dependent RNA helicase activity;0.00176361078219266!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00176932365655151!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00176932365655151!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00176932365655151!GO:0043681;protein import into mitochondrion;0.00177244382951727!GO:0008632;apoptotic program;0.00178486296827744!GO:0030027;lamellipodium;0.00180316604549774!GO:0007050;cell cycle arrest;0.0019932569356717!GO:0008243;plasminogen activator activity;0.00200390296946539!GO:0048471;perinuclear region of cytoplasm;0.00205844941809651!GO:0046474;glycerophospholipid biosynthetic process;0.00205934212454556!GO:0044433;cytoplasmic vesicle part;0.00213868436742675!GO:0044262;cellular carbohydrate metabolic process;0.00214039232489606!GO:0030137;COPI-coated vesicle;0.00214186296232653!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00215544997792497!GO:0035258;steroid hormone receptor binding;0.00218239435066838!GO:0030134;ER to Golgi transport vesicle;0.00239056545408108!GO:0006414;translational elongation;0.00239056545408108!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00239135413512148!GO:0019843;rRNA binding;0.00248418650446284!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00251732806610349!GO:0006839;mitochondrial transport;0.00257776506374005!GO:0051168;nuclear export;0.00261853223163278!GO:0006891;intra-Golgi vesicle-mediated transport;0.00268243161264212!GO:0006383;transcription from RNA polymerase III promoter;0.00268243161264212!GO:0006626;protein targeting to mitochondrion;0.00270468463447804!GO:0030176;integral to endoplasmic reticulum membrane;0.00276118312729231!GO:0003729;mRNA binding;0.00280492662590663!GO:0000775;chromosome, pericentric region;0.0029038458768567!GO:0051252;regulation of RNA metabolic process;0.00299850851669911!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00315766117428796!GO:0006695;cholesterol biosynthetic process;0.00322564791709939!GO:0015631;tubulin binding;0.00322564791709939!GO:0046467;membrane lipid biosynthetic process;0.00322924679992115!GO:0000776;kinetochore;0.00337307889318652!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00344079124901739!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00344079124901739!GO:0003690;double-stranded DNA binding;0.00345566717091389!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00347654722859358!GO:0045047;protein targeting to ER;0.00347654722859358!GO:0030132;clathrin coat of coated pit;0.00348511205404366!GO:0008094;DNA-dependent ATPase activity;0.00348511205404366!GO:0030127;COPII vesicle coat;0.00356781232113722!GO:0012507;ER to Golgi transport vesicle membrane;0.00356781232113722!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00359293176038409!GO:0012506;vesicle membrane;0.00362724445140734!GO:0046489;phosphoinositide biosynthetic process;0.00365083229276054!GO:0030880;RNA polymerase complex;0.00390210085486078!GO:0006892;post-Golgi vesicle-mediated transport;0.00391229047947217!GO:0030660;Golgi-associated vesicle membrane;0.0039167880543024!GO:0008139;nuclear localization sequence binding;0.00406330925068321!GO:0000059;protein import into nucleus, docking;0.00422142918641167!GO:0005657;replication fork;0.00427149751248546!GO:0005684;U2-dependent spliceosome;0.004338250669782!GO:0030521;androgen receptor signaling pathway;0.004338250669782!GO:0008610;lipid biosynthetic process;0.00436753360694131!GO:0005096;GTPase activator activity;0.0045467803967122!GO:0008312;7S RNA binding;0.00512161385195802!GO:0017166;vinculin binding;0.0051898829149022!GO:0043284;biopolymer biosynthetic process;0.00553606136722083!GO:0045045;secretory pathway;0.00554479040288203!GO:0006818;hydrogen transport;0.00583714994798894!GO:0006302;double-strand break repair;0.00592663607156564!GO:0015992;proton transport;0.00593359425704396!GO:0000786;nucleosome;0.00612335916663605!GO:0008180;signalosome;0.0061659799281461!GO:0006979;response to oxidative stress;0.0061903398439625!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00619343447890523!GO:0015399;primary active transmembrane transporter activity;0.00619343447890523!GO:0048487;beta-tubulin binding;0.00632485410245194!GO:0019222;regulation of metabolic process;0.00638773830806709!GO:0006509;membrane protein ectodomain proteolysis;0.00642660542510962!GO:0033619;membrane protein proteolysis;0.00642660542510962!GO:0030118;clathrin coat;0.00686133474591856!GO:0022406;membrane docking;0.00691642343523256!GO:0048278;vesicle docking;0.00691642343523256!GO:0006650;glycerophospholipid metabolic process;0.00719091595496128!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0073071563390255!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0073071563390255!GO:0050681;androgen receptor binding;0.00760706244685793!GO:0051087;chaperone binding;0.00761932148282013!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00788510800231316!GO:0000428;DNA-directed RNA polymerase complex;0.00788510800231316!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00793262675157148!GO:0044452;nucleolar part;0.0080055307332403!GO:0005637;nuclear inner membrane;0.00806675662910108!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00808397718869095!GO:0003711;transcription elongation regulator activity;0.0081426303824032!GO:0031543;peptidyl-proline dioxygenase activity;0.00819702136720173!GO:0007242;intracellular signaling cascade;0.00820290002537381!GO:0003678;DNA helicase activity;0.00888955984793226!GO:0016272;prefoldin complex;0.00890371676868814!GO:0051052;regulation of DNA metabolic process;0.00891344008783055!GO:0005862;muscle thin filament tropomyosin;0.00910920699533626!GO:0006417;regulation of translation;0.00917667623553646!GO:0005869;dynactin complex;0.0093494814095616!GO:0031418;L-ascorbic acid binding;0.00947179039288615!GO:0005874;microtubule;0.00952812765307499!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00957065755051045!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0100080795280206!GO:0000082;G1/S transition of mitotic cell cycle;0.0101415096223672!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0101415096223672!GO:0031902;late endosome membrane;0.010282084503746!GO:0007006;mitochondrial membrane organization and biogenesis;0.010282084503746!GO:0007052;mitotic spindle organization and biogenesis;0.0106717398904844!GO:0007093;mitotic cell cycle checkpoint;0.0106717398904844!GO:0006904;vesicle docking during exocytosis;0.01070713978138!GO:0000339;RNA cap binding;0.0108854169757437!GO:0051128;regulation of cellular component organization and biogenesis;0.0110105400786206!GO:0046483;heterocycle metabolic process;0.0115102121776562!GO:0016251;general RNA polymerase II transcription factor activity;0.0115134233778995!GO:0003684;damaged DNA binding;0.011634489723654!GO:0030125;clathrin vesicle coat;0.0116441511646736!GO:0030665;clathrin coated vesicle membrane;0.0116441511646736!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0119261188187248!GO:0032984;macromolecular complex disassembly;0.012414730134109!GO:0006402;mRNA catabolic process;0.0125845071938613!GO:0004674;protein serine/threonine kinase activity;0.012634809006248!GO:0003746;translation elongation factor activity;0.0128108035539537!GO:0006740;NADPH regeneration;0.0128115710455682!GO:0006098;pentose-phosphate shunt;0.0128115710455682!GO:0031625;ubiquitin protein ligase binding;0.0128134678625297!GO:0030384;phosphoinositide metabolic process;0.0132094823789965!GO:0008283;cell proliferation;0.0132094823789965!GO:0048144;fibroblast proliferation;0.0133856289860465!GO:0048145;regulation of fibroblast proliferation;0.0133856289860465!GO:0006595;polyamine metabolic process;0.013499296212617!GO:0019798;procollagen-proline dioxygenase activity;0.0136370413426149!GO:0005832;chaperonin-containing T-complex;0.0137251312741235!GO:0006984;ER-nuclear signaling pathway;0.0146066329344826!GO:0007088;regulation of mitosis;0.0146387509438881!GO:0045941;positive regulation of transcription;0.014740098780614!GO:0045893;positive regulation of transcription, DNA-dependent;0.0151584461743784!GO:0007034;vacuolar transport;0.0152804591214915!GO:0030041;actin filament polymerization;0.0157023556398956!GO:0031529;ruffle organization and biogenesis;0.0158855796862835!GO:0051101;regulation of DNA binding;0.0161008475821622!GO:0008033;tRNA processing;0.0161272648083642!GO:0051540;metal cluster binding;0.0161272648083642!GO:0051536;iron-sulfur cluster binding;0.0161272648083642!GO:0048146;positive regulation of fibroblast proliferation;0.016324018597885!GO:0030032;lamellipodium biogenesis;0.0169609139506397!GO:0046519;sphingoid metabolic process;0.0171563080822923!GO:0007030;Golgi organization and biogenesis;0.0174448347382465!GO:0043022;ribosome binding;0.0176204189851019!GO:0003682;chromatin binding;0.0177310986304508!GO:0045892;negative regulation of transcription, DNA-dependent;0.0183158678529017!GO:0022890;inorganic cation transmembrane transporter activity;0.0183486616599848!GO:0007265;Ras protein signal transduction;0.0187237413573777!GO:0006352;transcription initiation;0.0188343777569215!GO:0043065;positive regulation of apoptosis;0.018863495982467!GO:0031124;mRNA 3'-end processing;0.0188795135139513!GO:0043488;regulation of mRNA stability;0.0196948780316718!GO:0043487;regulation of RNA stability;0.0196948780316718!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.019857648608408!GO:0015002;heme-copper terminal oxidase activity;0.019857648608408!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.019857648608408!GO:0004129;cytochrome-c oxidase activity;0.019857648608408!GO:0050790;regulation of catalytic activity;0.01994043794661!GO:0043241;protein complex disassembly;0.0199739938063065!GO:0006354;RNA elongation;0.0200330882350466!GO:0030518;steroid hormone receptor signaling pathway;0.0200330882350466!GO:0003779;actin binding;0.0201009905580012!GO:0016408;C-acyltransferase activity;0.0207317250555928!GO:0043068;positive regulation of programmed cell death;0.0210350851938979!GO:0004177;aminopeptidase activity;0.0216810023399093!GO:0040008;regulation of growth;0.021768206441007!GO:0009889;regulation of biosynthetic process;0.0219532617746013!GO:0030833;regulation of actin filament polymerization;0.0220126270644763!GO:0005938;cell cortex;0.0221071443548673!GO:0006672;ceramide metabolic process;0.0221237571051661!GO:0051287;NAD binding;0.0223179237432805!GO:0006007;glucose catabolic process;0.0228714712472282!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0228750733720445!GO:0030433;ER-associated protein catabolic process;0.0229757399817549!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0229757399817549!GO:0031326;regulation of cellular biosynthetic process;0.0230906895404448!GO:0006497;protein amino acid lipidation;0.0233467633807742!GO:0032940;secretion by cell;0.0236152663229346!GO:0006790;sulfur metabolic process;0.024094688593782!GO:0030119;AP-type membrane coat adaptor complex;0.0241334079369781!GO:0043492;ATPase activity, coupled to movement of substances;0.0250380480383573!GO:0008022;protein C-terminus binding;0.0251354092270141!GO:0000096;sulfur amino acid metabolic process;0.0255359316302073!GO:0006401;RNA catabolic process;0.0257032855348442!GO:0016584;nucleosome positioning;0.0261257981613765!GO:0005581;collagen;0.0262020207223156!GO:0003756;protein disulfide isomerase activity;0.0262164112141787!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0262164112141787!GO:0005774;vacuolar membrane;0.0263072138618766!GO:0033673;negative regulation of kinase activity;0.02663734227859!GO:0006469;negative regulation of protein kinase activity;0.02663734227859!GO:0043624;cellular protein complex disassembly;0.0270323338729175!GO:0008234;cysteine-type peptidase activity;0.027169222061322!GO:0045792;negative regulation of cell size;0.0276557518998055!GO:0031371;ubiquitin conjugating enzyme complex;0.0278356420054835!GO:0006310;DNA recombination;0.0281192178503947!GO:0006611;protein export from nucleus;0.0283208311481231!GO:0000209;protein polyubiquitination;0.0284652123370493!GO:0050811;GABA receptor binding;0.0292131164798838!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0296943289242627!GO:0042168;heme metabolic process;0.0296943289242627!GO:0051272;positive regulation of cell motility;0.0302612476225468!GO:0040017;positive regulation of locomotion;0.0302612476225468!GO:0006778;porphyrin metabolic process;0.0303746681373126!GO:0033013;tetrapyrrole metabolic process;0.0303746681373126!GO:0007021;tubulin folding;0.030481747227634!GO:0007040;lysosome organization and biogenesis;0.0305601363689287!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0307710083532976!GO:0030308;negative regulation of cell growth;0.0312062791770936!GO:0005801;cis-Golgi network;0.0320684111768175!GO:0000910;cytokinesis;0.0321660804481814!GO:0007033;vacuole organization and biogenesis;0.0321703838813563!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0321703838813563!GO:0031301;integral to organelle membrane;0.0323394680580184!GO:0008154;actin polymerization and/or depolymerization;0.0327775906141657!GO:0004287;prolyl oligopeptidase activity;0.032964524157877!GO:0000049;tRNA binding;0.0341139453165719!GO:0005100;Rho GTPase activator activity;0.0341430079365216!GO:0051348;negative regulation of transferase activity;0.0342108378693605!GO:0006739;NADP metabolic process;0.0343919410671114!GO:0022411;cellular component disassembly;0.0349912695649729!GO:0006378;mRNA polyadenylation;0.0350970954289049!GO:0006897;endocytosis;0.0350970954289049!GO:0010324;membrane invagination;0.0350970954289049!GO:0030031;cell projection biogenesis;0.0354942410944235!GO:0051270;regulation of cell motility;0.0359758293073008!GO:0006289;nucleotide-excision repair;0.0370226110760865!GO:0004003;ATP-dependent DNA helicase activity;0.0372571455771571!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0374256716662906!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0374256716662906!GO:0008538;proteasome activator activity;0.0377051913095395!GO:0006376;mRNA splice site selection;0.0378675649929696!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0378675649929696!GO:0006607;NLS-bearing substrate import into nucleus;0.0382882299966792!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0382882299966792!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0384586923211993!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0386413349286393!GO:0032508;DNA duplex unwinding;0.0386413349286393!GO:0032392;DNA geometric change;0.0386413349286393!GO:0008637;apoptotic mitochondrial changes;0.0387410182708!GO:0030503;regulation of cell redox homeostasis;0.0390015417762301!GO:0030131;clathrin adaptor complex;0.0390497153984877!GO:0006275;regulation of DNA replication;0.0393873077753254!GO:0022415;viral reproductive process;0.0393873077753254!GO:0005092;GDP-dissociation inhibitor activity;0.0395389434662653!GO:0001952;regulation of cell-matrix adhesion;0.0398338490713159!GO:0006144;purine base metabolic process;0.0415814998490834!GO:0009225;nucleotide-sugar metabolic process;0.0422858938926422!GO:0009112;nucleobase metabolic process;0.0426977311743254!GO:0030911;TPR domain binding;0.0427710777597242!GO:0000792;heterochromatin;0.0429672592346704!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0431733478879127!GO:0005784;translocon complex;0.0432080990465373!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0432577286368514!GO:0004722;protein serine/threonine phosphatase activity;0.0433822893915688!GO:0030508;thiol-disulfide exchange intermediate activity;0.043559381698205!GO:0035035;histone acetyltransferase binding;0.0437137442686508!GO:0051539;4 iron, 4 sulfur cluster binding;0.0442183963994384!GO:0043433;negative regulation of transcription factor activity;0.0454128180224425!GO:0046426;negative regulation of JAK-STAT cascade;0.0460840677006928!GO:0000118;histone deacetylase complex;0.0465315904459684!GO:0006506;GPI anchor biosynthetic process;0.0486026857859027!GO:0006643;membrane lipid metabolic process;0.0486193114320504!GO:0005099;Ras GTPase activator activity;0.0486574329101513!GO:0043281;regulation of caspase activity;0.0491442382872859!GO:0009966;regulation of signal transduction;0.0491876505955362 | |||
|sample_id=11756 | |sample_id=11756 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=HSF1,2:1.97401061992;NKX3-1:1.64501219368;FOX{I1,J2}:1.49552654633;POU3F1..4:1.36598740002;GZF1:1.29804302461;NFIX:1.26025825509;ALX4:1.25135308953;NFATC1..3:1.24572969592;CDC5L:1.2122353532;TAL1_TCF{3,4,12}:1.17851459776;ALX1:1.17439957042;HOX{A5,B5}:1.12638134737;NKX2-2,8:1.12585009999;AIRE:1.10709984789;EN1,2:1.00663524724;TEF:0.997944839721;ZNF384:0.99783547573;EVI1:0.985551026953;NKX2-1,4:0.905803948049;SRF:0.902704997705;CRX:0.894350575883;ZNF238:0.866010674989;TEAD1:0.863628378084;PAX1,9:0.855016806887;HMGA1,2:0.824156040921;PAX8:0.805827023821;UFEwm:0.794990515226;HBP1_HMGB_SSRP1_UBTF:0.786158410949;HIF1A:0.755961382021;MYBL2:0.753866695287;TLX1..3_NFIC{dimer}:0.733932784721;NFE2L2:0.702913003078;IKZF1:0.690372735129;HOX{A4,D4}:0.67358023666;PPARG:0.656953415923;ZIC1..3:0.620531351013;PRDM1:0.617551988997;XBP1:0.593358344944;NFE2L1:0.577637568891;MZF1:0.5732307246;ZBTB6:0.572228254321;NR3C1:0.555875642749;FOS_FOS{B,L1}_JUN{B,D}:0.534539768722;XCPE1{core}:0.513888443765;BACH2:0.501896425523;RXRA_VDR{dimer}:0.495606882455;GATA4:0.475900615802;TFCP2:0.464590857496;GTF2I:0.445182485816;ATF6:0.444191796986;KLF4:0.443849618399;TBP:0.428658122695;SOX17:0.403914330984;TP53:0.383767937836;ONECUT1,2:0.383650643305;TLX2:0.36211140897;ZBTB16:0.357872373889;TBX4,5:0.332721063169;TFDP1:0.332417248605;GTF2A1,2:0.330670055498;GLI1..3:0.298853809658;PAX6:0.294401075312;HLF:0.292271927913;MAFB:0.291961622007;GFI1B:0.291071408783;FOXM1:0.2873857026;NKX3-2:0.286170884623;AR:0.279515902488;HES1:0.277188446309;PAX2:0.275202159934;RXR{A,B,G}:0.265110213521;NFE2:0.263006297621;EBF1:0.242318010331;JUN:0.228936389361;SMAD1..7,9:0.226882081678;SPZ1:0.226389856653;ELK1,4_GABP{A,B1}:0.220962510542;NFIL3:0.219419124971;GCM1,2:0.218430391007;HMX1:0.208739854373;NANOG{mouse}:0.207317768156;MAZ:0.200054548712;POU1F1:0.197851236375;FOSL2:0.18896128003;LEF1_TCF7_TCF7L1,2:0.185123984523;bHLH_family:0.176559658138;AHR_ARNT_ARNT2:0.168801806034;PAX4:0.154026944371;NRF1:0.148100152077;RUNX1..3:0.145788306063;FOXL1:0.145049582842;MTE{core}:0.142890303799;POU5F1:0.14157628552;CDX1,2,4:0.129538585271;NHLH1,2:0.11916993419;PAX3,7:0.0968824492672;ESR1:0.0788058933685;SOX2:0.0747274733453;ARID5B:0.0571630683636;E2F1..5:0.0535964752845;TFAP2B:0.0508587851182;NKX6-1,2:0.0491751821284;ZFP161:0.0420289251354;HNF1A:0.0295109819556;PATZ1:0.0278336867183;RFX1:0.0264870927496;ZNF143:0.0140621459329;ADNP_IRX_SIX_ZHX:0.00531894557514;EP300:0.00472683994437;DBP:-0.000419827753675;ZNF148:-0.000897257209398;NFKB1_REL_RELA:-0.00516233178867;ELF1,2,4:-0.0259921262862;LHX3,4:-0.0269395983438;ATF2:-0.0465913674639;SOX5:-0.0597748522793;IRF1,2:-0.0774053406621;FOXD3:-0.104231897281;POU2F1..3:-0.105956638694;MED-1{core}:-0.112277038628;ETS1,2:-0.121067581714;CEBPA,B_DDIT3:-0.122578158938;MYFfamily:-0.133498567966;STAT5{A,B}:-0.135977423788;MYB:-0.145439465924;STAT1,3:-0.154614104971;EGR1..3:-0.157583570511;POU6F1:-0.161843965349;SP1:-0.164581680324;TFAP2{A,C}:-0.170390273062;GFI1:-0.172601156304;DMAP1_NCOR{1,2}_SMARC:-0.173343614781;HIC1:-0.176565094504;PAX5:-0.178750357297;OCT4_SOX2{dimer}:-0.19157061014;TFAP4:-0.193459546536;RREB1:-0.195262092879;REST:-0.21770027331;PRRX1,2:-0.221211245474;IRF7:-0.234325952179;SREBF1,2:-0.235309695551;SOX{8,9,10}:-0.260373192318;MEF2{A,B,C,D}:-0.260758991897;NR1H4:-0.279285197618;STAT2,4,6:-0.28487734016;PBX1:-0.291792100559;HNF4A_NR2F1,2:-0.294124709898;NR6A1:-0.294993440331;ESRRA:-0.298567694378;CREB1:-0.30090343513;SPI1:-0.302975845839;FOX{D1,D2}:-0.308162229194;YY1:-0.317228913282;ATF5_CREB3:-0.325449269495;GATA6:-0.368580555588;MTF1:-0.368828108572;HOXA9_MEIS1:-0.385248807059;NFY{A,B,C}:-0.395374690407;LMO2:-0.409746420957;TGIF1:-0.415604285314;BPTF:-0.41583169768;SPIB:-0.422430553068;FOXN1:-0.423087002777;FOXA2:-0.431450019175;FOXQ1:-0.455839337997;ZNF423:-0.471024888599;RBPJ:-0.477208960958;FOXO1,3,4:-0.525166637591;TOPORS:-0.526018963065;FOXP3:-0.55809146089;SNAI1..3:-0.566266596413;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.573031123502;HAND1,2:-0.633124150103;FOXP1:-0.64846213998;IKZF2:-0.66551584301;NR5A1,2:-0.678707523208;MYOD1:-0.682522678823;RFX2..5_RFXANK_RFXAP:-0.703197136213;CUX2:-0.706491245116;ZEB1:-0.762060346265;NKX2-3_NKX2-5:-0.797512767679;RORA:-0.802806525718;ATF4:-0.871314091313;NANOG:-0.871674788464;VSX1,2:-0.890650999034;BREu{core}:-0.89068243198;HOX{A6,A7,B6,B7}:-0.927612063317;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.96446174203;PITX1..3:-0.99122643836;T:-1.08626912861;FOX{F1,F2,J1}:-1.10223033397;PDX1:-1.10436892074 | |top_motifs=HSF1,2:1.97401061992;NKX3-1:1.64501219368;FOX{I1,J2}:1.49552654633;POU3F1..4:1.36598740002;GZF1:1.29804302461;NFIX:1.26025825509;ALX4:1.25135308953;NFATC1..3:1.24572969592;CDC5L:1.2122353532;TAL1_TCF{3,4,12}:1.17851459776;ALX1:1.17439957042;HOX{A5,B5}:1.12638134737;NKX2-2,8:1.12585009999;AIRE:1.10709984789;EN1,2:1.00663524724;TEF:0.997944839721;ZNF384:0.99783547573;EVI1:0.985551026953;NKX2-1,4:0.905803948049;SRF:0.902704997705;CRX:0.894350575883;ZNF238:0.866010674989;TEAD1:0.863628378084;PAX1,9:0.855016806887;HMGA1,2:0.824156040921;PAX8:0.805827023821;UFEwm:0.794990515226;HBP1_HMGB_SSRP1_UBTF:0.786158410949;HIF1A:0.755961382021;MYBL2:0.753866695287;TLX1..3_NFIC{dimer}:0.733932784721;NFE2L2:0.702913003078;IKZF1:0.690372735129;HOX{A4,D4}:0.67358023666;PPARG:0.656953415923;ZIC1..3:0.620531351013;PRDM1:0.617551988997;XBP1:0.593358344944;NFE2L1:0.577637568891;MZF1:0.5732307246;ZBTB6:0.572228254321;NR3C1:0.555875642749;FOS_FOS{B,L1}_JUN{B,D}:0.534539768722;XCPE1{core}:0.513888443765;BACH2:0.501896425523;RXRA_VDR{dimer}:0.495606882455;GATA4:0.475900615802;TFCP2:0.464590857496;GTF2I:0.445182485816;ATF6:0.444191796986;KLF4:0.443849618399;TBP:0.428658122695;SOX17:0.403914330984;TP53:0.383767937836;ONECUT1,2:0.383650643305;TLX2:0.36211140897;ZBTB16:0.357872373889;TBX4,5:0.332721063169;TFDP1:0.332417248605;GTF2A1,2:0.330670055498;GLI1..3:0.298853809658;PAX6:0.294401075312;HLF:0.292271927913;MAFB:0.291961622007;GFI1B:0.291071408783;FOXM1:0.2873857026;NKX3-2:0.286170884623;AR:0.279515902488;HES1:0.277188446309;PAX2:0.275202159934;RXR{A,B,G}:0.265110213521;NFE2:0.263006297621;EBF1:0.242318010331;JUN:0.228936389361;SMAD1..7,9:0.226882081678;SPZ1:0.226389856653;ELK1,4_GABP{A,B1}:0.220962510542;NFIL3:0.219419124971;GCM1,2:0.218430391007;HMX1:0.208739854373;NANOG{mouse}:0.207317768156;MAZ:0.200054548712;POU1F1:0.197851236375;FOSL2:0.18896128003;LEF1_TCF7_TCF7L1,2:0.185123984523;bHLH_family:0.176559658138;AHR_ARNT_ARNT2:0.168801806034;PAX4:0.154026944371;NRF1:0.148100152077;RUNX1..3:0.145788306063;FOXL1:0.145049582842;MTE{core}:0.142890303799;POU5F1:0.14157628552;CDX1,2,4:0.129538585271;NHLH1,2:0.11916993419;PAX3,7:0.0968824492672;ESR1:0.0788058933685;SOX2:0.0747274733453;ARID5B:0.0571630683636;E2F1..5:0.0535964752845;TFAP2B:0.0508587851182;NKX6-1,2:0.0491751821284;ZFP161:0.0420289251354;HNF1A:0.0295109819556;PATZ1:0.0278336867183;RFX1:0.0264870927496;ZNF143:0.0140621459329;ADNP_IRX_SIX_ZHX:0.00531894557514;EP300:0.00472683994437;DBP:-0.000419827753675;ZNF148:-0.000897257209398;NFKB1_REL_RELA:-0.00516233178867;ELF1,2,4:-0.0259921262862;LHX3,4:-0.0269395983438;ATF2:-0.0465913674639;SOX5:-0.0597748522793;IRF1,2:-0.0774053406621;FOXD3:-0.104231897281;POU2F1..3:-0.105956638694;MED-1{core}:-0.112277038628;ETS1,2:-0.121067581714;CEBPA,B_DDIT3:-0.122578158938;MYFfamily:-0.133498567966;STAT5{A,B}:-0.135977423788;MYB:-0.145439465924;STAT1,3:-0.154614104971;EGR1..3:-0.157583570511;POU6F1:-0.161843965349;SP1:-0.164581680324;TFAP2{A,C}:-0.170390273062;GFI1:-0.172601156304;DMAP1_NCOR{1,2}_SMARC:-0.173343614781;HIC1:-0.176565094504;PAX5:-0.178750357297;OCT4_SOX2{dimer}:-0.19157061014;TFAP4:-0.193459546536;RREB1:-0.195262092879;REST:-0.21770027331;PRRX1,2:-0.221211245474;IRF7:-0.234325952179;SREBF1,2:-0.235309695551;SOX{8,9,10}:-0.260373192318;MEF2{A,B,C,D}:-0.260758991897;NR1H4:-0.279285197618;STAT2,4,6:-0.28487734016;PBX1:-0.291792100559;HNF4A_NR2F1,2:-0.294124709898;NR6A1:-0.294993440331;ESRRA:-0.298567694378;CREB1:-0.30090343513;SPI1:-0.302975845839;FOX{D1,D2}:-0.308162229194;YY1:-0.317228913282;ATF5_CREB3:-0.325449269495;GATA6:-0.368580555588;MTF1:-0.368828108572;HOXA9_MEIS1:-0.385248807059;NFY{A,B,C}:-0.395374690407;LMO2:-0.409746420957;TGIF1:-0.415604285314;BPTF:-0.41583169768;SPIB:-0.422430553068;FOXN1:-0.423087002777;FOXA2:-0.431450019175;FOXQ1:-0.455839337997;ZNF423:-0.471024888599;RBPJ:-0.477208960958;FOXO1,3,4:-0.525166637591;TOPORS:-0.526018963065;FOXP3:-0.55809146089;SNAI1..3:-0.566266596413;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.573031123502;HAND1,2:-0.633124150103;FOXP1:-0.64846213998;IKZF2:-0.66551584301;NR5A1,2:-0.678707523208;MYOD1:-0.682522678823;RFX2..5_RFXANK_RFXAP:-0.703197136213;CUX2:-0.706491245116;ZEB1:-0.762060346265;NKX2-3_NKX2-5:-0.797512767679;RORA:-0.802806525718;ATF4:-0.871314091313;NANOG:-0.871674788464;VSX1,2:-0.890650999034;BREu{core}:-0.89068243198;HOX{A6,A7,B6,B7}:-0.927612063317;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.96446174203;PITX1..3:-0.99122643836;T:-1.08626912861;FOX{F1,F2,J1}:-1.10223033397;PDX1:-1.10436892074 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11756-123H1;search_select_hide=table117:FF:11756-123H1 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer left ovary, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12372 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12372
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12372
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.673 |
| 10 | 10 | 0.496 |
| 100 | 100 | 0.317 |
| 101 | 101 | 0.923 |
| 102 | 102 | 0.193 |
| 103 | 103 | 0.709 |
| 104 | 104 | 0.992 |
| 105 | 105 | 0.303 |
| 106 | 106 | 0.884 |
| 107 | 107 | 0.499 |
| 108 | 108 | 0.734 |
| 109 | 109 | 0.455 |
| 11 | 11 | 0.729 |
| 110 | 110 | 0.184 |
| 111 | 111 | 0.107 |
| 112 | 112 | 0.914 |
| 113 | 113 | 0.0087 |
| 114 | 114 | 0.646 |
| 115 | 115 | 0.448 |
| 116 | 116 | 0.562 |
| 117 | 117 | 0.842 |
| 118 | 118 | 0.579 |
| 119 | 119 | 0.666 |
| 12 | 12 | 0.336 |
| 120 | 120 | 0.145 |
| 121 | 121 | 0.772 |
| 122 | 122 | 0.24 |
| 123 | 123 | 1.95607e-4 |
| 124 | 124 | 0.187 |
| 125 | 125 | 0.973 |
| 126 | 126 | 0.515 |
| 127 | 127 | 0.574 |
| 128 | 128 | 0.851 |
| 129 | 129 | 0.862 |
| 13 | 13 | 0.439 |
| 130 | 130 | 0.616 |
| 131 | 131 | 0.0111 |
| 132 | 132 | 0.803 |
| 133 | 133 | 0.659 |
| 134 | 134 | 0.471 |
| 135 | 135 | 0.487 |
| 136 | 136 | 0.969 |
| 137 | 137 | 0.958 |
| 138 | 138 | 0.618 |
| 139 | 139 | 0.667 |
| 14 | 14 | 0.0895 |
| 140 | 140 | 0.98 |
| 141 | 141 | 0.595 |
| 142 | 142 | 0.428 |
| 143 | 143 | 0.123 |
| 144 | 144 | 0.922 |
| 145 | 145 | 0.679 |
| 146 | 146 | 0.555 |
| 147 | 147 | 0.0294 |
| 148 | 148 | 0.658 |
| 149 | 149 | 0.594 |
| 15 | 15 | 0.816 |
| 150 | 150 | 0.141 |
| 151 | 151 | 0.402 |
| 152 | 152 | 0.32 |
| 153 | 153 | 0.978 |
| 154 | 154 | 0.633 |
| 155 | 155 | 2.0594e-4 |
| 156 | 156 | 0.468 |
| 157 | 157 | 0.249 |
| 158 | 158 | 0.00923 |
| 159 | 159 | 0.122 |
| 16 | 16 | 0.0962 |
| 160 | 160 | 0.904 |
| 161 | 161 | 0.213 |
| 162 | 162 | 0.783 |
| 163 | 163 | 0.111 |
| 164 | 164 | 0.45 |
| 165 | 165 | 0.936 |
| 166 | 166 | 0.187 |
| 167 | 167 | 0.313 |
| 168 | 168 | 0.985 |
| 169 | 169 | 0.867 |
| 17 | 17 | 0.867 |
| 18 | 18 | 0.114 |
| 19 | 19 | 0.626 |
| 2 | 2 | 0.484 |
| 20 | 20 | 0.55 |
| 21 | 21 | 0.656 |
| 22 | 22 | 0.875 |
| 23 | 23 | 0.0813 |
| 24 | 24 | 0.225 |
| 25 | 25 | 0.126 |
| 26 | 26 | 0.925 |
| 27 | 27 | 0.951 |
| 28 | 28 | 0.521 |
| 29 | 29 | 0.622 |
| 3 | 3 | 0.923 |
| 30 | 30 | 0.518 |
| 31 | 31 | 0.585 |
| 32 | 32 | 0.00176 |
| 33 | 33 | 0.795 |
| 34 | 34 | 0.699 |
| 35 | 35 | 0.932 |
| 36 | 36 | 0.0404 |
| 37 | 37 | 0.318 |
| 38 | 38 | 0.434 |
| 39 | 39 | 0.127 |
| 4 | 4 | 0.196 |
| 40 | 40 | 0.0635 |
| 41 | 41 | 0.945 |
| 42 | 42 | 0.814 |
| 43 | 43 | 0.586 |
| 44 | 44 | 0.868 |
| 45 | 45 | 0.808 |
| 46 | 46 | 0.952 |
| 47 | 47 | 0.243 |
| 48 | 48 | 0.799 |
| 49 | 49 | 0.0149 |
| 5 | 5 | 0.963 |
| 50 | 50 | 0.674 |
| 51 | 51 | 0.772 |
| 52 | 52 | 0.789 |
| 53 | 53 | 0.0251 |
| 54 | 54 | 0.879 |
| 55 | 55 | 0.283 |
| 56 | 56 | 0.533 |
| 57 | 57 | 0.686 |
| 58 | 58 | 0.123 |
| 59 | 59 | 0.649 |
| 6 | 6 | 0.499 |
| 60 | 60 | 0.544 |
| 61 | 61 | 0.425 |
| 62 | 62 | 0.428 |
| 63 | 63 | 0.916 |
| 64 | 64 | 0.517 |
| 65 | 65 | 0.739 |
| 66 | 66 | 0.662 |
| 67 | 67 | 0.559 |
| 68 | 68 | 0.683 |
| 69 | 69 | 0.133 |
| 7 | 7 | 0.137 |
| 70 | 70 | 0.254 |
| 71 | 71 | 0.374 |
| 72 | 72 | 0.638 |
| 73 | 73 | 0.16 |
| 74 | 74 | 0.569 |
| 75 | 75 | 0.709 |
| 76 | 76 | 0.933 |
| 77 | 77 | 0.323 |
| 78 | 78 | 0.0832 |
| 79 | 79 | 0.04 |
| 8 | 8 | 0.812 |
| 80 | 80 | 0.921 |
| 81 | 81 | 0.778 |
| 82 | 82 | 0.344 |
| 83 | 83 | 0.758 |
| 84 | 84 | 0.583 |
| 85 | 85 | 0.762 |
| 86 | 86 | 0.873 |
| 87 | 87 | 0.354 |
| 88 | 88 | 0.945 |
| 89 | 89 | 0.341 |
| 9 | 9 | 0.494 |
| 90 | 90 | 0.409 |
| 91 | 91 | 0.964 |
| 92 | 92 | 0.928 |
| 93 | 93 | 0.878 |
| 94 | 94 | 0.89 |
| 95 | 95 | 0.534 |
| 96 | 96 | 0.956 |
| 97 | 97 | 0.264 |
| 98 | 98 | 0.00911 |
| 99 | 99 | 0.0292 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12372
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000273 human mesenchymal precursor cell- ovarian cancer-left ovary sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002119 (left ovary)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000273 (human mesenchymal precursor cell- ovarian cancer-left ovary sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
