FF:13433-144E4: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005143 | |||
|accession_numbers=CAGE;DRX008604;DRR009476;DRZ000901;DRZ002286;DRZ012251;DRZ013636 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000540,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000393,CL:0000211,CL:0000404,CL:0000255 | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000210,FF:0000101,FF:0000001,FF:0200005,FF:0200003 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|donor= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep1.CNhs13826.13433-144E4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep1.CNhs13826.13433-144E4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep1.CNhs13826.13433-144E4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep1.CNhs13826.13433-144E4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/iPS%2520differentiation%2520to%2520neuron%252c%2520control%2520donor%2520C32-CRL1502%252c%2520day00%252c%2520rep1.CNhs13826.13433-144E4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:13433-144E4 | |id=FF:13433-144E4 | ||
|is_a=FF:0000210;;FF:0200003 | |is_a=FF:0000210;;FF:0200003 | ||
|name=iPS differentiation to neuron, control donor C32-CRL1502 | |is_obsolete= | ||
|library_id=CNhs13826 | |||
|library_id_phase_based=2:CNhs13826 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;13433 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;13433 | |||
|name=iPS differentiation to neuron, control donor C32-CRL1502 | |||
|namespace= | |namespace= | ||
|part_of= | |part_of= | ||
| Line 44: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=144 | |rna_box=144 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 54: | Line 76: | ||
|rna_rin=10 | |rna_rin=10 | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.44E+06 | ||
|rna_weight_ug=5 | |rna_weight_ug=5 | ||
|sample_age=12wk gestation | |sample_age=12wk gestation | ||
|sample_category=time courses | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.04946059895068e-273!GO:0043226;organelle;1.13871534421354e-227!GO:0043229;intracellular organelle;2.37118081426426e-227!GO:0043231;intracellular membrane-bound organelle;1.10649029423438e-222!GO:0043227;membrane-bound organelle;1.61543355112077e-222!GO:0005737;cytoplasm;1.06034182058802e-178!GO:0044422;organelle part;1.68070289039572e-159!GO:0044446;intracellular organelle part;3.20540990311107e-158!GO:0044444;cytoplasmic part;1.63062421918423e-123!GO:0032991;macromolecular complex;3.07337895760736e-120!GO:0005634;nucleus;1.43413344712519e-105!GO:0044238;primary metabolic process;6.07919327321072e-103!GO:0030529;ribonucleoprotein complex;2.71601638873226e-102!GO:0044237;cellular metabolic process;7.348187043435e-102!GO:0043170;macromolecule metabolic process;5.46025541902504e-97!GO:0003723;RNA binding;5.49291518405525e-87!GO:0044428;nuclear part;7.02351854055957e-85!GO:0043233;organelle lumen;5.2933674606697e-83!GO:0031974;membrane-enclosed lumen;5.2933674606697e-83!GO:0005739;mitochondrion;4.58858067994566e-78!GO:0005515;protein binding;8.98793888725077e-63!GO:0005840;ribosome;1.07173336244219e-61!GO:0043283;biopolymer metabolic process;1.75318697952784e-61!GO:0043234;protein complex;1.04046755371851e-60!GO:0006396;RNA processing;5.38779095846966e-60!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.41032360839724e-56!GO:0006412;translation;1.36293867277404e-55!GO:0016043;cellular component organization and biogenesis;1.80676489976609e-55!GO:0003735;structural constituent of ribosome;1.68743211183545e-53!GO:0010467;gene expression;1.75693231142948e-53!GO:0031981;nuclear lumen;1.04362925268697e-50!GO:0044429;mitochondrial part;3.16044726802573e-50!GO:0006996;organelle organization and biogenesis;7.70730462740915e-48!GO:0043228;non-membrane-bound organelle;1.75357067636354e-47!GO:0043232;intracellular non-membrane-bound organelle;1.75357067636354e-47!GO:0033279;ribosomal subunit;2.5422205289036e-46!GO:0019538;protein metabolic process;4.16143292475158e-46!GO:0016071;mRNA metabolic process;3.58443739284792e-45!GO:0009058;biosynthetic process;9.69127354155868e-45!GO:0044249;cellular biosynthetic process;1.26121511354071e-44!GO:0065003;macromolecular complex assembly;1.37229567529108e-43!GO:0006259;DNA metabolic process;2.31338434002329e-43!GO:0031090;organelle membrane;3.16474929412085e-43!GO:0031967;organelle envelope;3.41872989585009e-43!GO:0031975;envelope;1.01194600850545e-42!GO:0009059;macromolecule biosynthetic process;7.41916279466353e-42!GO:0008380;RNA splicing;2.5237860034372e-41!GO:0044267;cellular protein metabolic process;4.24820582864326e-40!GO:0044260;cellular macromolecule metabolic process;1.01002955437044e-39!GO:0022607;cellular component assembly;1.72621573816225e-39!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.1142389920391e-38!GO:0033036;macromolecule localization;1.5819288994825e-38!GO:0015031;protein transport;3.00457278962332e-38!GO:0006397;mRNA processing;3.94556684863622e-38!GO:0003676;nucleic acid binding;2.76749305787251e-37!GO:0005829;cytosol;1.41783784580584e-34!GO:0046907;intracellular transport;1.76488168854838e-34!GO:0008104;protein localization;2.70159220484018e-34!GO:0045184;establishment of protein localization;2.19926329612865e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.15481317629551e-33!GO:0005681;spliceosome;1.04169253056403e-30!GO:0000166;nucleotide binding;4.12219627072391e-30!GO:0019866;organelle inner membrane;4.97325061594845e-30!GO:0005740;mitochondrial envelope;6.00664495579667e-30!GO:0005654;nucleoplasm;9.66789036816004e-29!GO:0007049;cell cycle;1.58027368442101e-28!GO:0005694;chromosome;2.5437743708351e-28!GO:0031966;mitochondrial membrane;4.61843987252191e-28!GO:0005743;mitochondrial inner membrane;4.87128814049438e-28!GO:0006886;intracellular protein transport;2.90212539888957e-27!GO:0016070;RNA metabolic process;3.15641473971611e-26!GO:0044427;chromosomal part;4.30785372931118e-26!GO:0044445;cytosolic part;9.21112427311765e-26!GO:0031980;mitochondrial lumen;1.23678225943664e-24!GO:0005759;mitochondrial matrix;1.23678225943664e-24!GO:0015934;large ribosomal subunit;5.38815070692549e-24!GO:0006974;response to DNA damage stimulus;6.86796790365413e-24!GO:0044455;mitochondrial membrane part;8.31392514636465e-24!GO:0005730;nucleolus;1.04177362728699e-23!GO:0051649;establishment of cellular localization;1.35779413721988e-23!GO:0015935;small ribosomal subunit;1.93248452385953e-23!GO:0051276;chromosome organization and biogenesis;2.15541664923433e-23!GO:0044451;nucleoplasm part;2.72103291425024e-23!GO:0051641;cellular localization;1.06276800846145e-22!GO:0006119;oxidative phosphorylation;1.51132939834821e-22!GO:0000278;mitotic cell cycle;9.69711850463951e-22!GO:0022618;protein-RNA complex assembly;1.27425712191345e-21!GO:0016462;pyrophosphatase activity;5.96796909569165e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.62856125723618e-21!GO:0016874;ligase activity;1.02838689272166e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.02838689272166e-20!GO:0022402;cell cycle process;1.04601446189387e-20!GO:0032553;ribonucleotide binding;2.22878223827126e-20!GO:0032555;purine ribonucleotide binding;2.22878223827126e-20!GO:0017111;nucleoside-triphosphatase activity;7.7874537410954e-20!GO:0006281;DNA repair;1.27993379911192e-19!GO:0017076;purine nucleotide binding;1.28918403365152e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;1.38674658830496e-18!GO:0006457;protein folding;3.32122748956863e-18!GO:0000087;M phase of mitotic cell cycle;3.57932756882141e-18!GO:0006323;DNA packaging;6.2842590332611e-18!GO:0022403;cell cycle phase;6.41678104565061e-18!GO:0007067;mitosis;6.51859837815039e-18!GO:0005761;mitochondrial ribosome;8.30002881069611e-18!GO:0000313;organellar ribosome;8.30002881069611e-18!GO:0006260;DNA replication;1.08938563177139e-17!GO:0008135;translation factor activity, nucleic acid binding;1.13201725057824e-17!GO:0044265;cellular macromolecule catabolic process;1.13201725057824e-17!GO:0042254;ribosome biogenesis and assembly;1.9452377115187e-17!GO:0006512;ubiquitin cycle;2.81189706383147e-17!GO:0012505;endomembrane system;3.19183310045767e-17!GO:0005746;mitochondrial respiratory chain;5.37065066620314e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;5.51138742223184e-17!GO:0005524;ATP binding;6.47406965471984e-17!GO:0019941;modification-dependent protein catabolic process;8.11556680616882e-17!GO:0043632;modification-dependent macromolecule catabolic process;8.11556680616882e-17!GO:0032559;adenyl ribonucleotide binding;1.23026989549717e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.25993989586797e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.26015302429943e-16!GO:0044257;cellular protein catabolic process;1.63124237560923e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.6700906050727e-16!GO:0051301;cell division;2.04848463623146e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.58212943713085e-16!GO:0003954;NADH dehydrogenase activity;2.58212943713085e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.58212943713085e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.72550723448347e-16!GO:0065004;protein-DNA complex assembly;5.10883085930086e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;5.75746532727174e-16!GO:0000375;RNA splicing, via transesterification reactions;5.75746532727174e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.75746532727174e-16!GO:0043285;biopolymer catabolic process;7.65859254416126e-16!GO:0030554;adenyl nucleotide binding;8.55821609057962e-16!GO:0000279;M phase;1.24311871694249e-15!GO:0000785;chromatin;1.55987914693508e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.96396754886673e-15!GO:0031965;nuclear membrane;2.07963399711769e-15!GO:0009719;response to endogenous stimulus;2.94673572719625e-15!GO:0009057;macromolecule catabolic process;3.13519652789937e-15!GO:0030163;protein catabolic process;1.36830818399769e-14!GO:0006333;chromatin assembly or disassembly;1.41137031303095e-14!GO:0051186;cofactor metabolic process;1.41479670578831e-14!GO:0006605;protein targeting;2.44045557752282e-14!GO:0044453;nuclear membrane part;4.43318263351987e-14!GO:0005635;nuclear envelope;4.94031012783175e-14!GO:0006413;translational initiation;4.95139506644693e-14!GO:0043412;biopolymer modification;5.06731015008943e-14!GO:0042775;organelle ATP synthesis coupled electron transport;5.30793409604803e-14!GO:0042773;ATP synthesis coupled electron transport;5.30793409604803e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.59589268508519e-14!GO:0045271;respiratory chain complex I;5.59589268508519e-14!GO:0005747;mitochondrial respiratory chain complex I;5.59589268508519e-14!GO:0005643;nuclear pore;7.12429540755509e-14!GO:0006334;nucleosome assembly;1.21917092805774e-13!GO:0044248;cellular catabolic process;1.28908882565566e-13!GO:0006399;tRNA metabolic process;1.99240843821358e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.01305460970234e-13!GO:0003743;translation initiation factor activity;2.44208446906235e-13!GO:0048770;pigment granule;2.62872934048381e-13!GO:0042470;melanosome;2.62872934048381e-13!GO:0005794;Golgi apparatus;3.27397251156372e-13!GO:0031497;chromatin assembly;5.28194833193117e-13!GO:0051082;unfolded protein binding;7.57152196089068e-13!GO:0006446;regulation of translational initiation;1.46456741513985e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.58794015756779e-12!GO:0006403;RNA localization;1.81570149632843e-12!GO:0006364;rRNA processing;2.92878525194879e-12!GO:0050657;nucleic acid transport;3.47781810712942e-12!GO:0051236;establishment of RNA localization;3.47781810712942e-12!GO:0050658;RNA transport;3.47781810712942e-12!GO:0004386;helicase activity;3.6887119639513e-12!GO:0006732;coenzyme metabolic process;3.90424572565996e-12!GO:0016072;rRNA metabolic process;4.88058852623929e-12!GO:0006464;protein modification process;8.18879271852815e-12!GO:0016604;nuclear body;9.02294008901337e-12!GO:0008565;protein transporter activity;1.4050834607183e-11!GO:0042623;ATPase activity, coupled;1.68516123963567e-11!GO:0016887;ATPase activity;2.18322859960546e-11!GO:0065002;intracellular protein transport across a membrane;2.43094767658166e-11!GO:0006461;protein complex assembly;3.22206270043973e-11!GO:0043687;post-translational protein modification;7.66633538086662e-11!GO:0008134;transcription factor binding;8.58705511443162e-11!GO:0016740;transferase activity;8.9469016585767e-11!GO:0015630;microtubule cytoskeleton;8.9469016585767e-11!GO:0046930;pore complex;9.56366657944286e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.05564398255216e-10!GO:0006913;nucleocytoplasmic transport;1.36155340622784e-10!GO:0005783;endoplasmic reticulum;1.8625693121966e-10!GO:0051028;mRNA transport;2.20464810572851e-10!GO:0048193;Golgi vesicle transport;2.7230108662254e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.91247285875436e-10!GO:0004812;aminoacyl-tRNA ligase activity;2.91247285875436e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.91247285875436e-10!GO:0051169;nuclear transport;4.19461335374864e-10!GO:0030532;small nuclear ribonucleoprotein complex;5.12312679934854e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.63718966499266e-10!GO:0008026;ATP-dependent helicase activity;6.96157436388207e-10!GO:0016607;nuclear speck;6.9657292693504e-10!GO:0043038;amino acid activation;7.71089319322136e-10!GO:0006418;tRNA aminoacylation for protein translation;7.71089319322136e-10!GO:0043039;tRNA aminoacylation;7.71089319322136e-10!GO:0006261;DNA-dependent DNA replication;7.85222338466856e-10!GO:0009259;ribonucleotide metabolic process;9.44760429651174e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.1803323181812e-09!GO:0006163;purine nucleotide metabolic process;1.21011944643788e-09!GO:0006164;purine nucleotide biosynthetic process;1.8395322914628e-09!GO:0009260;ribonucleotide biosynthetic process;3.36305732971431e-09!GO:0051726;regulation of cell cycle;3.82710912814895e-09!GO:0008639;small protein conjugating enzyme activity;4.08778316033146e-09!GO:0009055;electron carrier activity;4.84701952929799e-09!GO:0000074;regulation of progression through cell cycle;5.52485347626109e-09!GO:0004842;ubiquitin-protein ligase activity;6.25952347638126e-09!GO:0007005;mitochondrion organization and biogenesis;6.41188724538069e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.69237916024567e-09!GO:0016779;nucleotidyltransferase activity;1.16519083295593e-08!GO:0000775;chromosome, pericentric region;1.19197332672682e-08!GO:0051188;cofactor biosynthetic process;1.51194893564365e-08!GO:0009150;purine ribonucleotide metabolic process;1.51928551786984e-08!GO:0044432;endoplasmic reticulum part;1.62297169885484e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.39397831595901e-08!GO:0019787;small conjugating protein ligase activity;2.50910936093692e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.74222277486582e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.04341721476362e-08!GO:0016192;vesicle-mediated transport;3.98084359277312e-08!GO:0017038;protein import;6.02067038282607e-08!GO:0015986;ATP synthesis coupled proton transport;6.02067038282607e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.02067038282607e-08!GO:0009060;aerobic respiration;6.90274275681335e-08!GO:0003697;single-stranded DNA binding;8.80588941463084e-08!GO:0043566;structure-specific DNA binding;9.81864524390235e-08!GO:0003899;DNA-directed RNA polymerase activity;1.10405204921005e-07!GO:0000786;nucleosome;1.23085004087856e-07!GO:0016568;chromatin modification;1.35522827410356e-07!GO:0019829;cation-transporting ATPase activity;1.58537841151833e-07!GO:0005657;replication fork;1.71863572753771e-07!GO:0009056;catabolic process;1.93084087416774e-07!GO:0045333;cellular respiration;2.06503939701801e-07!GO:0009108;coenzyme biosynthetic process;2.41643524335399e-07!GO:0009117;nucleotide metabolic process;3.72696277943161e-07!GO:0009142;nucleoside triphosphate biosynthetic process;3.75318202984812e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.75318202984812e-07!GO:0005793;ER-Golgi intermediate compartment;3.75425661575195e-07!GO:0000245;spliceosome assembly;3.86618664357697e-07!GO:0008094;DNA-dependent ATPase activity;3.98083479212535e-07!GO:0043623;cellular protein complex assembly;4.08548796385253e-07!GO:0009141;nucleoside triphosphate metabolic process;4.08548796385253e-07!GO:0016881;acid-amino acid ligase activity;4.56972496611324e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.85272313532977e-07!GO:0032446;protein modification by small protein conjugation;5.01918269507623e-07!GO:0007051;spindle organization and biogenesis;5.96280662679767e-07!GO:0050794;regulation of cellular process;6.17993225930123e-07!GO:0045259;proton-transporting ATP synthase complex;7.18688762524354e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.79260024787939e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.79260024787939e-07!GO:0016567;protein ubiquitination;7.79299079240103e-07!GO:0005762;mitochondrial large ribosomal subunit;9.37433394141407e-07!GO:0000315;organellar large ribosomal subunit;9.37433394141407e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.64332621241148e-07!GO:0009144;purine nucleoside triphosphate metabolic process;9.64332621241148e-07!GO:0007010;cytoskeleton organization and biogenesis;1.45208374510019e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.48666489496778e-06!GO:0005819;spindle;1.52146653169522e-06!GO:0006754;ATP biosynthetic process;1.53008535029878e-06!GO:0006753;nucleoside phosphate metabolic process;1.53008535029878e-06!GO:0044431;Golgi apparatus part;1.55811129210801e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.59059905691054e-06!GO:0003924;GTPase activity;1.6220390222768e-06!GO:0006099;tricarboxylic acid cycle;1.67268897633355e-06!GO:0046356;acetyl-CoA catabolic process;1.67268897633355e-06!GO:0005525;GTP binding;2.34742301003773e-06!GO:0048475;coated membrane;2.39497209741356e-06!GO:0030117;membrane coat;2.39497209741356e-06!GO:0046034;ATP metabolic process;2.63767975035874e-06!GO:0051329;interphase of mitotic cell cycle;3.04318930488013e-06!GO:0006084;acetyl-CoA metabolic process;3.0536057342192e-06!GO:0005839;proteasome core complex (sensu Eukaryota);3.13991583823335e-06!GO:0000314;organellar small ribosomal subunit;3.59350429405248e-06!GO:0005763;mitochondrial small ribosomal subunit;3.59350429405248e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.97457022876136e-06!GO:0006752;group transfer coenzyme metabolic process;4.14141570046242e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.28877037465409e-06!GO:0005813;centrosome;6.50831211947182e-06!GO:0051246;regulation of protein metabolic process;6.97437046588501e-06!GO:0006793;phosphorus metabolic process;7.20942851084542e-06!GO:0006796;phosphate metabolic process;7.20942851084542e-06!GO:0051325;interphase;7.39585417874258e-06!GO:0005667;transcription factor complex;7.39858030951977e-06!GO:0012501;programmed cell death;7.39858030951977e-06!GO:0005789;endoplasmic reticulum membrane;7.55671184605242e-06!GO:0003712;transcription cofactor activity;7.81188118933611e-06!GO:0016853;isomerase activity;7.83064122507108e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.26230311162139e-06!GO:0006888;ER to Golgi vesicle-mediated transport;8.3562984683008e-06!GO:0007017;microtubule-based process;8.43458587677945e-06!GO:0006915;apoptosis;9.961752342148e-06!GO:0019222;regulation of metabolic process;1.00364893863023e-05!GO:0000075;cell cycle checkpoint;1.00568384686922e-05!GO:0003724;RNA helicase activity;1.18943717524993e-05!GO:0031982;vesicle;1.23489196852754e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.47854553481913e-05!GO:0031410;cytoplasmic vesicle;1.60687077443811e-05!GO:0005815;microtubule organizing center;1.68376651114004e-05!GO:0004298;threonine endopeptidase activity;1.77134345995129e-05!GO:0006366;transcription from RNA polymerase II promoter;1.78046164885877e-05!GO:0051170;nuclear import;1.8283464939402e-05!GO:0005874;microtubule;1.89058515920347e-05!GO:0009109;coenzyme catabolic process;1.93989504283405e-05!GO:0032561;guanyl ribonucleotide binding;1.93989504283405e-05!GO:0019001;guanyl nucleotide binding;1.93989504283405e-05!GO:0030120;vesicle coat;1.99156807733072e-05!GO:0030662;coated vesicle membrane;1.99156807733072e-05!GO:0008168;methyltransferase activity;2.00666400599048e-05!GO:0031988;membrane-bound vesicle;2.15572502934244e-05!GO:0006613;cotranslational protein targeting to membrane;2.20545271413376e-05!GO:0051187;cofactor catabolic process;2.25429718100785e-05!GO:0000139;Golgi membrane;2.26104121989427e-05!GO:0006839;mitochondrial transport;2.42114985141928e-05!GO:0016859;cis-trans isomerase activity;2.42956679820395e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.47688595628584e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.03992592869968e-05!GO:0000776;kinetochore;3.29722564922921e-05!GO:0016363;nuclear matrix;3.55897733756944e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.90923652948394e-05!GO:0051168;nuclear export;4.31702162050369e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;4.34692654986586e-05!GO:0003690;double-stranded DNA binding;4.57308676843783e-05!GO:0006606;protein import into nucleus;5.17933330131726e-05!GO:0008033;tRNA processing;5.61736258331145e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;6.20142886404844e-05!GO:0003729;mRNA binding;6.55147012133782e-05!GO:0006383;transcription from RNA polymerase III promoter;6.74369140706906e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.76623530139774e-05!GO:0044452;nucleolar part;7.49983526663255e-05!GO:0043021;ribonucleoprotein binding;7.944027695349e-05!GO:0000059;protein import into nucleus, docking;8.16727632257604e-05!GO:0051427;hormone receptor binding;8.43461126349478e-05!GO:0008219;cell death;8.81547497107217e-05!GO:0016265;death;8.81547497107217e-05!GO:0006302;double-strand break repair;9.24608610829657e-05!GO:0009165;nucleotide biosynthetic process;9.32529854830254e-05!GO:0051052;regulation of DNA metabolic process;9.85006037473155e-05!GO:0005768;endosome;9.99012659587656e-05!GO:0050789;regulation of biological process;0.000104017689023697!GO:0006520;amino acid metabolic process;0.000105128874728066!GO:0016310;phosphorylation;0.000124886390223888!GO:0000151;ubiquitin ligase complex;0.000135821420602383!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000144555784908549!GO:0043681;protein import into mitochondrion;0.000168142277919759!GO:0035257;nuclear hormone receptor binding;0.000174378523588529!GO:0003682;chromatin binding;0.000196734443827!GO:0006402;mRNA catabolic process;0.000207357877354999!GO:0008186;RNA-dependent ATPase activity;0.000210223722617168!GO:0045454;cell redox homeostasis;0.000239668621728878!GO:0003678;DNA helicase activity;0.000243617100431273!GO:0006626;protein targeting to mitochondrion;0.000246435263641229!GO:0006414;translational elongation;0.000257517984332459!GO:0003684;damaged DNA binding;0.0002737702600834!GO:0006730;one-carbon compound metabolic process;0.000309153145953703!GO:0005788;endoplasmic reticulum lumen;0.000319128486636101!GO:0030880;RNA polymerase complex;0.000345213732847723!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00037277988026774!GO:0006612;protein targeting to membrane;0.000382073416021671!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000396940491276794!GO:0051087;chaperone binding;0.000419759589653992!GO:0005770;late endosome;0.000443352272476449!GO:0007059;chromosome segregation;0.000449270346178363!GO:0005798;Golgi-associated vesicle;0.000463428938051219!GO:0007006;mitochondrial membrane organization and biogenesis;0.000476091121789948!GO:0032259;methylation;0.000529970371047106!GO:0005684;U2-dependent spliceosome;0.000532485558462968!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000534071433679308!GO:0008654;phospholipid biosynthetic process;0.000547396905786707!GO:0008250;oligosaccharyl transferase complex;0.000550011463981307!GO:0006350;transcription;0.000609916225814766!GO:0006541;glutamine metabolic process;0.000614018277582356!GO:0051920;peroxiredoxin activity;0.000625480930573365!GO:0005769;early endosome;0.000627501308451005!GO:0006401;RNA catabolic process;0.000631653877540644!GO:0006310;DNA recombination;0.00064103321385867!GO:0043414;biopolymer methylation;0.000643421060391381!GO:0004004;ATP-dependent RNA helicase activity;0.000643421060391381!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000676569244714073!GO:0005048;signal sequence binding;0.000690744369225388!GO:0007093;mitotic cell cycle checkpoint;0.000690744369225388!GO:0031323;regulation of cellular metabolic process;0.000695695899466716!GO:0032508;DNA duplex unwinding;0.000757678786132789!GO:0032392;DNA geometric change;0.000757678786132789!GO:0006352;transcription initiation;0.000800408535992253!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000831436612354298!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000831436612354298!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000831436612354298!GO:0007264;small GTPase mediated signal transduction;0.0008328646731164!GO:0015980;energy derivation by oxidation of organic compounds;0.000838173034183653!GO:0016787;hydrolase activity;0.000840070726080388!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000844261479226873!GO:0000428;DNA-directed RNA polymerase complex;0.000844261479226873!GO:0008287;protein serine/threonine phosphatase complex;0.000904246766854493!GO:0015631;tubulin binding;0.00092794660225163!GO:0004576;oligosaccharyl transferase activity;0.000944596626349659!GO:0007052;mitotic spindle organization and biogenesis;0.000944596626349659!GO:0030867;rough endoplasmic reticulum membrane;0.00114929300234988!GO:0016126;sterol biosynthetic process;0.00127832553904443!GO:0006268;DNA unwinding during replication;0.00131318213975448!GO:0048471;perinuclear region of cytoplasm;0.00151529941210125!GO:0006144;purine base metabolic process;0.00162390705256821!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00165644087225706!GO:0000049;tRNA binding;0.00170568856086213!GO:0031252;leading edge;0.00172856061248036!GO:0007088;regulation of mitosis;0.00173718039925744!GO:0006270;DNA replication initiation;0.0017457238118355!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0017778658355931!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0017778658355931!GO:0004527;exonuclease activity;0.00191729833256191!GO:0046483;heterocycle metabolic process;0.00194181655720698!GO:0051252;regulation of RNA metabolic process;0.00194198121970311!GO:0044440;endosomal part;0.00194198121970311!GO:0010008;endosome membrane;0.00194198121970311!GO:0051539;4 iron, 4 sulfur cluster binding;0.00194518349281679!GO:0005741;mitochondrial outer membrane;0.0020691531272073!GO:0008652;amino acid biosynthetic process;0.00209496368220394!GO:0006284;base-excision repair;0.00209496368220394!GO:0019843;rRNA binding;0.00210946973056347!GO:0009112;nucleobase metabolic process;0.00213454395722536!GO:0004722;protein serine/threonine phosphatase activity;0.00214682160451712!GO:0043069;negative regulation of programmed cell death;0.00218078856672005!GO:0042802;identical protein binding;0.00228450596357516!GO:0043488;regulation of mRNA stability;0.00240707092481314!GO:0043487;regulation of RNA stability;0.00240707092481314!GO:0006790;sulfur metabolic process;0.00240945171112789!GO:0000096;sulfur amino acid metabolic process;0.00243824183801692!GO:0006519;amino acid and derivative metabolic process;0.00252000412565277!GO:0048500;signal recognition particle;0.00259026072809116!GO:0043066;negative regulation of apoptosis;0.00259026072809116!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0025956452994602!GO:0016272;prefoldin complex;0.00269190232065168!GO:0005905;coated pit;0.00280979749477826!GO:0008312;7S RNA binding;0.00303054314733526!GO:0006611;protein export from nucleus;0.00321404810678771!GO:0005791;rough endoplasmic reticulum;0.00321404810678771!GO:0006405;RNA export from nucleus;0.00323940686381618!GO:0048487;beta-tubulin binding;0.0032412728067866!GO:0009451;RNA modification;0.00325105594833771!GO:0032200;telomere organization and biogenesis;0.0032776478273319!GO:0000723;telomere maintenance;0.0032776478273319!GO:0000228;nuclear chromosome;0.00329310340298853!GO:0030145;manganese ion binding;0.00330679448329669!GO:0006338;chromatin remodeling;0.00345793696452193!GO:0043596;nuclear replication fork;0.00358026390749375!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00361613800196943!GO:0006275;regulation of DNA replication;0.00371801346722922!GO:0018196;peptidyl-asparagine modification;0.00391783833157817!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00391783833157817!GO:0000178;exosome (RNase complex);0.00391783833157817!GO:0009116;nucleoside metabolic process;0.00393611946471915!GO:0016251;general RNA polymerase II transcription factor activity;0.00395881520332116!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00396718813550825!GO:0045786;negative regulation of progression through cell cycle;0.00405601015648475!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00409112116371181!GO:0030036;actin cytoskeleton organization and biogenesis;0.00411366451641222!GO:0008601;protein phosphatase type 2A regulator activity;0.00413551807033843!GO:0010468;regulation of gene expression;0.00414394271518551!GO:0008139;nuclear localization sequence binding;0.00416073641092802!GO:0031968;organelle outer membrane;0.00421457797854193!GO:0030658;transport vesicle membrane;0.00424297925610546!GO:0006916;anti-apoptosis;0.00429555060992441!GO:0030118;clathrin coat;0.00429555060992441!GO:0048523;negative regulation of cellular process;0.00429555060992441!GO:0030119;AP-type membrane coat adaptor complex;0.00431754623874887!GO:0003711;transcription elongation regulator activity;0.00457752090732836!GO:0005885;Arp2/3 protein complex;0.00489318455518963!GO:0031324;negative regulation of cellular metabolic process;0.00495337934059314!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0051126135804387!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00513670528844284!GO:0015002;heme-copper terminal oxidase activity;0.00513670528844284!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00513670528844284!GO:0004129;cytochrome-c oxidase activity;0.00513670528844284!GO:0000159;protein phosphatase type 2A complex;0.00517554511144192!GO:0008092;cytoskeletal protein binding;0.00518718355627403!GO:0005637;nuclear inner membrane;0.00530679804523511!GO:0019867;outer membrane;0.00530911055306938!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00536978207660178!GO:0045047;protein targeting to ER;0.00536978207660178!GO:0040029;regulation of gene expression, epigenetic;0.00547664410418934!GO:0031072;heat shock protein binding;0.00549159856859149!GO:0006595;polyamine metabolic process;0.00555332728463341!GO:0000725;recombinational repair;0.00561027508460785!GO:0000724;double-strand break repair via homologous recombination;0.00561027508460785!GO:0003746;translation elongation factor activity;0.00561027508460785!GO:0033116;ER-Golgi intermediate compartment membrane;0.00577858897045409!GO:0005758;mitochondrial intermembrane space;0.00587495709904905!GO:0030131;clathrin adaptor complex;0.00604723776191557!GO:0016491;oxidoreductase activity;0.00605660387516978!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00655913700622917!GO:0000792;heterochromatin;0.00656890537310146!GO:0000209;protein polyubiquitination;0.00665676051677641!GO:0016584;nucleosome positioning;0.00677523415684624!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00677523415684624!GO:0008022;protein C-terminus binding;0.00678275033525351!GO:0006695;cholesterol biosynthetic process;0.0068741547655608!GO:0031124;mRNA 3'-end processing;0.00688123117297874!GO:0065009;regulation of a molecular function;0.00688123117297874!GO:0042393;histone binding;0.00701003219201408!GO:0031970;organelle envelope lumen;0.00720930763722022!GO:0005669;transcription factor TFIID complex;0.00720930763722022!GO:0031570;DNA integrity checkpoint;0.00723960432696316!GO:0032774;RNA biosynthetic process;0.00737594671490113!GO:0008180;signalosome;0.00751103035761104!GO:0004674;protein serine/threonine kinase activity;0.00759559586253965!GO:0009081;branched chain family amino acid metabolic process;0.00763125949367739!GO:0043022;ribosome binding;0.00791227238235232!GO:0009892;negative regulation of metabolic process;0.00794247278512053!GO:0006378;mRNA polyadenylation;0.00800817163553475!GO:0045045;secretory pathway;0.00805926521614693!GO:0019752;carboxylic acid metabolic process;0.00807066476637709!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00807978120785529!GO:0030660;Golgi-associated vesicle membrane;0.00819832797486727!GO:0051540;metal cluster binding;0.00828196563349793!GO:0051536;iron-sulfur cluster binding;0.00828196563349793!GO:0007021;tubulin folding;0.0083207157818164!GO:0043067;regulation of programmed cell death;0.0083426168049514!GO:0005832;chaperonin-containing T-complex;0.00840096083037469!GO:0019899;enzyme binding;0.00840096083037469!GO:0006082;organic acid metabolic process;0.00840968537618068!GO:0042981;regulation of apoptosis;0.00869611634524387!GO:0022884;macromolecule transmembrane transporter activity;0.00872986007188746!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.00872986007188746!GO:0004532;exoribonuclease activity;0.00872986007188746!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00872986007188746!GO:0006351;transcription, DNA-dependent;0.00872986007188746!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.00873994713021671!GO:0030133;transport vesicle;0.00884912600277512!GO:0016564;transcription repressor activity;0.00889120001841676!GO:0030134;ER to Golgi transport vesicle;0.00889608294455522!GO:0009303;rRNA transcription;0.00893053081826291!GO:0031577;spindle checkpoint;0.00919133622858078!GO:0046474;glycerophospholipid biosynthetic process;0.00949537246753419!GO:0006289;nucleotide-excision repair;0.00973400790835813!GO:0046467;membrane lipid biosynthetic process;0.0097921215003397!GO:0005876;spindle microtubule;0.0103002711395337!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0103896771998584!GO:0019783;small conjugating protein-specific protease activity;0.010403786506263!GO:0044454;nuclear chromosome part;0.0104297251577068!GO:0003713;transcription coactivator activity;0.0106186928779877!GO:0006007;glucose catabolic process;0.0106269170151729!GO:0044262;cellular carbohydrate metabolic process;0.0106467011221433!GO:0051287;NAD binding;0.0109683636818731!GO:0000922;spindle pole;0.0109958966787304!GO:0050178;phenylpyruvate tautomerase activity;0.0112149492999509!GO:0003714;transcription corepressor activity;0.0112792757022275!GO:0030029;actin filament-based process;0.0113047748671971!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0114784010200522!GO:0015992;proton transport;0.0117698674308466!GO:0004003;ATP-dependent DNA helicase activity;0.0119123411330471!GO:0000097;sulfur amino acid biosynthetic process;0.0119293733264514!GO:0000082;G1/S transition of mitotic cell cycle;0.0120604933073792!GO:0008320;protein transmembrane transporter activity;0.0121953846238276!GO:0044450;microtubule organizing center part;0.0122042785420561!GO:0050662;coenzyme binding;0.0131163407435874!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0132303758959025!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0134580417346327!GO:0006818;hydrogen transport;0.0136362149964286!GO:0045947;negative regulation of translational initiation;0.0136471836101843!GO:0043284;biopolymer biosynthetic process;0.0137908945143639!GO:0004518;nuclease activity;0.0145471661242902!GO:0004843;ubiquitin-specific protease activity;0.0147523523751593!GO:0030027;lamellipodium;0.0149452251371174!GO:0035258;steroid hormone receptor binding;0.0150621715044495!GO:0030127;COPII vesicle coat;0.0152614236557456!GO:0012507;ER to Golgi transport vesicle membrane;0.0152614236557456!GO:0016311;dephosphorylation;0.0160646677491341!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0160962946415038!GO:0015399;primary active transmembrane transporter activity;0.0160962946415038!GO:0043601;nuclear replisome;0.0163508552864321!GO:0030894;replisome;0.0163508552864321!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.016453220430474!GO:0003677;DNA binding;0.016453220430474!GO:0008632;apoptotic program;0.0166037917017524!GO:0000781;chromosome, telomeric region;0.0167215009197617!GO:0000339;RNA cap binding;0.0167922744070204!GO:0006400;tRNA modification;0.0177598410658574!GO:0008408;3'-5' exonuclease activity;0.0181708892022334!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.018219255690395!GO:0006733;oxidoreduction coenzyme metabolic process;0.0182202611842992!GO:0005663;DNA replication factor C complex;0.018356096434484!GO:0051789;response to protein stimulus;0.0183708396496292!GO:0006986;response to unfolded protein;0.0183708396496292!GO:0006220;pyrimidine nucleotide metabolic process;0.0183708396496292!GO:0051053;negative regulation of DNA metabolic process;0.0185531285588806!GO:0009124;nucleoside monophosphate biosynthetic process;0.018928520239626!GO:0009123;nucleoside monophosphate metabolic process;0.018928520239626!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0189579339388295!GO:0000070;mitotic sister chromatid segregation;0.0191699315340223!GO:0030663;COPI coated vesicle membrane;0.019382281806031!GO:0030126;COPI vesicle coat;0.019382281806031!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0196652381081197!GO:0006091;generation of precursor metabolites and energy;0.0196652381081197!GO:0016791;phosphoric monoester hydrolase activity;0.0203650999371412!GO:0051656;establishment of organelle localization;0.0204868067726184!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0206043481073156!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0206043481073156!GO:0030176;integral to endoplasmic reticulum membrane;0.0206043481073156!GO:0004221;ubiquitin thiolesterase activity;0.0206649696575914!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.020736332670221!GO:0001824;blastocyst development;0.0211229394839358!GO:0008637;apoptotic mitochondrial changes;0.0211430195871929!GO:0031123;RNA 3'-end processing;0.0211430195871929!GO:0005853;eukaryotic translation elongation factor 1 complex;0.021325710465955!GO:0042770;DNA damage response, signal transduction;0.021877225016149!GO:0016407;acetyltransferase activity;0.02222515118585!GO:0043086;negative regulation of catalytic activity;0.0225971782272579!GO:0000819;sister chromatid segregation;0.0226537277308081!GO:0007004;telomere maintenance via telomerase;0.0227630063085249!GO:0016835;carbon-oxygen lyase activity;0.0236459453352115!GO:0016044;membrane organization and biogenesis;0.0242488264661525!GO:0030521;androgen receptor signaling pathway;0.0244890529169955!GO:0004721;phosphoprotein phosphatase activity;0.0246987647888839!GO:0022890;inorganic cation transmembrane transporter activity;0.0246987647888839!GO:0005652;nuclear lamina;0.0248900859867225!GO:0044433;cytoplasmic vesicle part;0.0251392670586226!GO:0030659;cytoplasmic vesicle membrane;0.0251589496756288!GO:0030137;COPI-coated vesicle;0.0252355558891546!GO:0046128;purine ribonucleoside metabolic process;0.0253266243574209!GO:0042278;purine nucleoside metabolic process;0.0253266243574209!GO:0006740;NADPH regeneration;0.0256966055905053!GO:0006098;pentose-phosphate shunt;0.0256966055905053!GO:0016563;transcription activator activity;0.025703768778756!GO:0006376;mRNA splice site selection;0.0257416177420177!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0257416177420177!GO:0042769;DNA damage response, detection of DNA damage;0.0258534154206528!GO:0032984;macromolecular complex disassembly;0.0262348725935824!GO:0012506;vesicle membrane;0.0264096025538782!GO:0030132;clathrin coat of coated pit;0.0268064638419769!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0268064638419769!GO:0008097;5S rRNA binding;0.0268387748608719!GO:0008538;proteasome activator activity;0.0268469286348224!GO:0016585;chromatin remodeling complex;0.0271127448125712!GO:0043624;cellular protein complex disassembly;0.0271372902714418!GO:0006607;NLS-bearing substrate import into nucleus;0.0273011792178477!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0276835055621413!GO:0009064;glutamine family amino acid metabolic process;0.0280058944612489!GO:0000077;DNA damage checkpoint;0.0283368071902785!GO:0048519;negative regulation of biological process;0.0288582156270311!GO:0019904;protein domain specific binding;0.0289131108317761!GO:0046365;monosaccharide catabolic process;0.0294209518201962!GO:0006278;RNA-dependent DNA replication;0.0294463218371708!GO:0005862;muscle thin filament tropomyosin;0.0295420052019272!GO:0008017;microtubule binding;0.030178113188086!GO:0016790;thiolester hydrolase activity;0.0304994172008947!GO:0005938;cell cortex;0.0307230177998763!GO:0006650;glycerophospholipid metabolic process;0.0309883939908302!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.031313980113761!GO:0009161;ribonucleoside monophosphate metabolic process;0.0317742408774496!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0317742408774496!GO:0009113;purine base biosynthetic process;0.0320121878306772!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0323869378177422!GO:0045039;protein import into mitochondrial inner membrane;0.0323869378177422!GO:0000790;nuclear chromatin;0.0335693062041452!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0336582097675385!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0340232041392397!GO:0010257;NADH dehydrogenase complex assembly;0.0340232041392397!GO:0033108;mitochondrial respiratory chain complex assembly;0.0340232041392397!GO:0009119;ribonucleoside metabolic process;0.0340232041392397!GO:0003756;protein disulfide isomerase activity;0.0347230767511333!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0347230767511333!GO:0005784;translocon complex;0.035112760706853!GO:0017134;fibroblast growth factor binding;0.0351392055426189!GO:0016884;carbon-nitrogen ligase activity, with glutamine as amido-N-donor;0.0352650350978165!GO:0008213;protein amino acid alkylation;0.0352650350978165!GO:0006479;protein amino acid methylation;0.0352650350978165!GO:0000726;non-recombinational repair;0.0355989066619038!GO:0017166;vinculin binding;0.0355989066619038!GO:0000175;3'-5'-exoribonuclease activity;0.0364118896796564!GO:0031529;ruffle organization and biogenesis;0.0364418834569913!GO:0009083;branched chain family amino acid catabolic process;0.0364418834569913!GO:0030496;midbody;0.0368209315271329!GO:0046966;thyroid hormone receptor binding;0.0370757659854883!GO:0031371;ubiquitin conjugating enzyme complex;0.0371438246421774!GO:0050811;GABA receptor binding;0.0374024173620642!GO:0001726;ruffle;0.037894420581731!GO:0065007;biological regulation;0.038374929535349!GO:0005732;small nucleolar ribonucleoprotein complex;0.0390711342461485!GO:0001522;pseudouridine synthesis;0.0398889440716031!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0399493385581299!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0401458401069569!GO:0043241;protein complex disassembly;0.0406482582845467!GO:0035267;NuA4 histone acetyltransferase complex;0.0409142708607835!GO:0008326;site-specific DNA-methyltransferase (cytosine-specific) activity;0.0417697323076592!GO:0008610;lipid biosynthetic process;0.0422385567180191!GO:0004523;ribonuclease H activity;0.0429784231141395!GO:0043631;RNA polyadenylation;0.0430113925386879!GO:0016301;kinase activity;0.0437781911785471!GO:0006891;intra-Golgi vesicle-mediated transport;0.0441799522951709!GO:0016481;negative regulation of transcription;0.0444786433175399!GO:0009308;amine metabolic process;0.0446651028624196!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0449667567583189!GO:0019320;hexose catabolic process;0.0456551538491845!GO:0005996;monosaccharide metabolic process;0.0459518990082645!GO:0046112;nucleobase biosynthetic process;0.0460804971577219!GO:0001836;release of cytochrome c from mitochondria;0.0460804971577219!GO:0051098;regulation of binding;0.0460804971577219!GO:0006096;glycolysis;0.0465888867081172!GO:0043130;ubiquitin binding;0.0465888867081172!GO:0032182;small conjugating protein binding;0.0465888867081172!GO:0004680;casein kinase activity;0.0473989119476159!GO:0007018;microtubule-based movement;0.0478488377706921!GO:0000086;G2/M transition of mitotic cell cycle;0.0487193013868105!GO:0008143;poly(A) binding;0.0489852817973089!GO:0045449;regulation of transcription;0.0493821320873767!GO:0006672;ceramide metabolic process;0.0494393637213729 | |||
|sample_id=13433 | |sample_id=13433 | ||
|sample_note= | |sample_note= | ||
| Line 75: | Line 99: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|time= day00 | |||
|timecourse=Human_iPS_to_neuron_(wt)_2 | |||
|top_motifs=OCT4_SOX2{dimer}:3.87930755594;POU2F1..3:2.39694370186;NFY{A,B,C}:2.17002785368;SOX{8,9,10}:2.11767876123;SP1:1.86918129714;E2F1..5:1.74280008079;SNAI1..3:1.60651072238;PBX1:1.51634665538;PATZ1:1.50248889854;GFI1:1.45428649877;XCPE1{core}:1.44250235086;CUX2:1.41474929797;PITX1..3:1.38744497457;ZNF143:1.32465197972;SOX2:1.30615619903;TOPORS:1.26453984692;CDX1,2,4:1.22137635205;ZEB1:1.14278292871;LMO2:1.1312998109;AIRE:1.06578463794;CDC5L:1.05291432144;YY1:0.991826677634;MYOD1:0.983889677744;TFDP1:0.967278534147;RORA:0.93146291617;ARID5B:0.930595317043;ONECUT1,2:0.929010444728;FOXP1:0.911640881503;bHLH_family:0.874822977198;MZF1:0.850917310849;NRF1:0.782207909822;POU3F1..4:0.776322182775;ZIC1..3:0.755957934343;RBPJ:0.738782137884;ALX1:0.720409159802;PAX8:0.714873780768;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.685380223452;NKX6-1,2:0.683058270934;HOX{A4,D4}:0.679237758352;SOX17:0.674521067015;ATF4:0.666461967885;POU5F1:0.655470563218;EVI1:0.637128104218;STAT1,3:0.623355434064;EBF1:0.620285071494;T:0.61371320748;ELK1,4_GABP{A,B1}:0.605322508886;IKZF2:0.602510325461;FOXM1:0.575390539045;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.516437658185;ZNF384:0.514642216301;KLF4:0.457014346409;FOXD3:0.443481903386;ZFP161:0.406568035219;UFEwm:0.401761677306;FOXQ1:0.393243819713;TBP:0.373051810573;NKX2-3_NKX2-5:0.358748390018;REST:0.332032954139;GFI1B:0.316145533456;LEF1_TCF7_TCF7L1,2:0.307030683325;MAZ:0.306391241648;FOX{I1,J2}:0.279147406083;NR5A1,2:0.271736587509;TP53:0.211977564653;MYFfamily:0.194927418804;HIC1:0.188984761389;ZBTB16:0.186312550535;BREu{core}:0.180342692142;MYB:0.160892903512;VSX1,2:0.142017908336;HIF1A:0.119576652086;STAT5{A,B}:0.118896583988;NKX2-2,8:0.0994733936617;NANOG:0.0955566347256;MTF1:0.0768610424206;HAND1,2:0.0738980866405;TEAD1:0.0731823290725;FOXL1:0.0590096657772;MTE{core}:0.0146844272745;CREB1:0.0112416401605;PAX5:-0.000441052182195;PAX1,9:-0.0024766949146;TFAP2B:-0.010583164721;JUN:-0.0335748192758;CRX:-0.057738371499;ZBTB6:-0.0718233098043;ESRRA:-0.0958134919684;LHX3,4:-0.142730421517;GATA4:-0.143415058642;HNF4A_NR2F1,2:-0.144866699633;ATF2:-0.151095265628;ZNF423:-0.154219591042;NKX3-1:-0.154284216732;NANOG{mouse}:-0.156872318258;ATF5_CREB3:-0.163205192132;PAX4:-0.166209497453;HOX{A6,A7,B6,B7}:-0.166222492106;HOX{A5,B5}:-0.203629541305;EN1,2:-0.220579014093;NHLH1,2:-0.221830440656;HNF1A:-0.267233388383;PRDM1:-0.277499834447;NFKB1_REL_RELA:-0.278554404462;FOXN1:-0.281284055904;RFX1:-0.302517226575;RREB1:-0.304906982456;NKX2-1,4:-0.305518745991;MED-1{core}:-0.310824828412;GTF2I:-0.323493852505;TBX4,5:-0.330617058512;MYBL2:-0.342154815616;NR6A1:-0.34835560207;IKZF1:-0.385584942229;TFAP2{A,C}:-0.388521300736;PAX2:-0.390592896102;SREBF1,2:-0.390980304161;XBP1:-0.404543796243;EGR1..3:-0.410184178999;GCM1,2:-0.432152508783;DBP:-0.437106827284;ALX4:-0.441468119883;FOXO1,3,4:-0.448746353839;GATA6:-0.466590834881;PAX3,7:-0.493342749208;HMGA1,2:-0.531894762744;PPARG:-0.532198080947;FOX{F1,F2,J1}:-0.532492657993;POU1F1:-0.546045922641;POU6F1:-0.551894896835;FOX{D1,D2}:-0.57716877346;DMAP1_NCOR{1,2}_SMARC:-0.595281693789;MEF2{A,B,C,D}:-0.598135158762;NR1H4:-0.599312787604;FOXP3:-0.606531071853;GTF2A1,2:-0.606761865655;RXR{A,B,G}:-0.610252923607;BACH2:-0.619654398153;TFAP4:-0.655833346977;SPIB:-0.65783110914;RFX2..5_RFXANK_RFXAP:-0.670511567235;NFE2L2:-0.691537847699;ESR1:-0.700463861195;NFE2:-0.711407905357;SPI1:-0.726283971555;NFE2L1:-0.732431582112;FOS_FOS{B,L1}_JUN{B,D}:-0.744488411109;RUNX1..3:-0.754899962398;HSF1,2:-0.76020277939;ADNP_IRX_SIX_ZHX:-0.782305856292;SPZ1:-0.808856557975;FOSL2:-0.823088470119;SOX5:-0.839134181701;SRF:-0.840685793279;AR:-0.882242580975;PRRX1,2:-0.887515903768;AHR_ARNT_ARNT2:-0.887737175505;ELF1,2,4:-0.904039404482;ZNF238:-0.915542804476;HMX1:-0.936281508717;TEF:-0.938172201436;NKX3-2:-0.957260538829;HLF:-1.0104382978;TFCP2:-1.05554645276;ZNF148:-1.09756731282;RXRA_VDR{dimer}:-1.10432851016;FOXA2:-1.12558669658;CEBPA,B_DDIT3:-1.12742072026;ETS1,2:-1.14599926135;HBP1_HMGB_SSRP1_UBTF:-1.17650897198;IRF1,2:-1.19851795507;TLX2:-1.25893226022;NR3C1:-1.26078249022;PAX6:-1.27665249932;BPTF:-1.34605954682;NFIX:-1.36611212924;NFATC1..3:-1.37966369812;HES1:-1.40249569701;HOXA9_MEIS1:-1.41602575449;NFIL3:-1.430953776;IRF7:-1.43755331084;GZF1:-1.51064166147;EP300:-1.57326233493;STAT2,4,6:-1.59135384983;GLI1..3:-1.61548059701;TAL1_TCF{3,4,12}:-1.65076914677;TLX1..3_NFIC{dimer}:-1.66220884388;TGIF1:-1.66860215255;ATF6:-1.67321833894;MAFB:-1.90229604737;PDX1:-1.97771510505;SMAD1..7,9:-2.24592239245 | |top_motifs=OCT4_SOX2{dimer}:3.87930755594;POU2F1..3:2.39694370186;NFY{A,B,C}:2.17002785368;SOX{8,9,10}:2.11767876123;SP1:1.86918129714;E2F1..5:1.74280008079;SNAI1..3:1.60651072238;PBX1:1.51634665538;PATZ1:1.50248889854;GFI1:1.45428649877;XCPE1{core}:1.44250235086;CUX2:1.41474929797;PITX1..3:1.38744497457;ZNF143:1.32465197972;SOX2:1.30615619903;TOPORS:1.26453984692;CDX1,2,4:1.22137635205;ZEB1:1.14278292871;LMO2:1.1312998109;AIRE:1.06578463794;CDC5L:1.05291432144;YY1:0.991826677634;MYOD1:0.983889677744;TFDP1:0.967278534147;RORA:0.93146291617;ARID5B:0.930595317043;ONECUT1,2:0.929010444728;FOXP1:0.911640881503;bHLH_family:0.874822977198;MZF1:0.850917310849;NRF1:0.782207909822;POU3F1..4:0.776322182775;ZIC1..3:0.755957934343;RBPJ:0.738782137884;ALX1:0.720409159802;PAX8:0.714873780768;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.685380223452;NKX6-1,2:0.683058270934;HOX{A4,D4}:0.679237758352;SOX17:0.674521067015;ATF4:0.666461967885;POU5F1:0.655470563218;EVI1:0.637128104218;STAT1,3:0.623355434064;EBF1:0.620285071494;T:0.61371320748;ELK1,4_GABP{A,B1}:0.605322508886;IKZF2:0.602510325461;FOXM1:0.575390539045;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.516437658185;ZNF384:0.514642216301;KLF4:0.457014346409;FOXD3:0.443481903386;ZFP161:0.406568035219;UFEwm:0.401761677306;FOXQ1:0.393243819713;TBP:0.373051810573;NKX2-3_NKX2-5:0.358748390018;REST:0.332032954139;GFI1B:0.316145533456;LEF1_TCF7_TCF7L1,2:0.307030683325;MAZ:0.306391241648;FOX{I1,J2}:0.279147406083;NR5A1,2:0.271736587509;TP53:0.211977564653;MYFfamily:0.194927418804;HIC1:0.188984761389;ZBTB16:0.186312550535;BREu{core}:0.180342692142;MYB:0.160892903512;VSX1,2:0.142017908336;HIF1A:0.119576652086;STAT5{A,B}:0.118896583988;NKX2-2,8:0.0994733936617;NANOG:0.0955566347256;MTF1:0.0768610424206;HAND1,2:0.0738980866405;TEAD1:0.0731823290725;FOXL1:0.0590096657772;MTE{core}:0.0146844272745;CREB1:0.0112416401605;PAX5:-0.000441052182195;PAX1,9:-0.0024766949146;TFAP2B:-0.010583164721;JUN:-0.0335748192758;CRX:-0.057738371499;ZBTB6:-0.0718233098043;ESRRA:-0.0958134919684;LHX3,4:-0.142730421517;GATA4:-0.143415058642;HNF4A_NR2F1,2:-0.144866699633;ATF2:-0.151095265628;ZNF423:-0.154219591042;NKX3-1:-0.154284216732;NANOG{mouse}:-0.156872318258;ATF5_CREB3:-0.163205192132;PAX4:-0.166209497453;HOX{A6,A7,B6,B7}:-0.166222492106;HOX{A5,B5}:-0.203629541305;EN1,2:-0.220579014093;NHLH1,2:-0.221830440656;HNF1A:-0.267233388383;PRDM1:-0.277499834447;NFKB1_REL_RELA:-0.278554404462;FOXN1:-0.281284055904;RFX1:-0.302517226575;RREB1:-0.304906982456;NKX2-1,4:-0.305518745991;MED-1{core}:-0.310824828412;GTF2I:-0.323493852505;TBX4,5:-0.330617058512;MYBL2:-0.342154815616;NR6A1:-0.34835560207;IKZF1:-0.385584942229;TFAP2{A,C}:-0.388521300736;PAX2:-0.390592896102;SREBF1,2:-0.390980304161;XBP1:-0.404543796243;EGR1..3:-0.410184178999;GCM1,2:-0.432152508783;DBP:-0.437106827284;ALX4:-0.441468119883;FOXO1,3,4:-0.448746353839;GATA6:-0.466590834881;PAX3,7:-0.493342749208;HMGA1,2:-0.531894762744;PPARG:-0.532198080947;FOX{F1,F2,J1}:-0.532492657993;POU1F1:-0.546045922641;POU6F1:-0.551894896835;FOX{D1,D2}:-0.57716877346;DMAP1_NCOR{1,2}_SMARC:-0.595281693789;MEF2{A,B,C,D}:-0.598135158762;NR1H4:-0.599312787604;FOXP3:-0.606531071853;GTF2A1,2:-0.606761865655;RXR{A,B,G}:-0.610252923607;BACH2:-0.619654398153;TFAP4:-0.655833346977;SPIB:-0.65783110914;RFX2..5_RFXANK_RFXAP:-0.670511567235;NFE2L2:-0.691537847699;ESR1:-0.700463861195;NFE2:-0.711407905357;SPI1:-0.726283971555;NFE2L1:-0.732431582112;FOS_FOS{B,L1}_JUN{B,D}:-0.744488411109;RUNX1..3:-0.754899962398;HSF1,2:-0.76020277939;ADNP_IRX_SIX_ZHX:-0.782305856292;SPZ1:-0.808856557975;FOSL2:-0.823088470119;SOX5:-0.839134181701;SRF:-0.840685793279;AR:-0.882242580975;PRRX1,2:-0.887515903768;AHR_ARNT_ARNT2:-0.887737175505;ELF1,2,4:-0.904039404482;ZNF238:-0.915542804476;HMX1:-0.936281508717;TEF:-0.938172201436;NKX3-2:-0.957260538829;HLF:-1.0104382978;TFCP2:-1.05554645276;ZNF148:-1.09756731282;RXRA_VDR{dimer}:-1.10432851016;FOXA2:-1.12558669658;CEBPA,B_DDIT3:-1.12742072026;ETS1,2:-1.14599926135;HBP1_HMGB_SSRP1_UBTF:-1.17650897198;IRF1,2:-1.19851795507;TLX2:-1.25893226022;NR3C1:-1.26078249022;PAX6:-1.27665249932;BPTF:-1.34605954682;NFIX:-1.36611212924;NFATC1..3:-1.37966369812;HES1:-1.40249569701;HOXA9_MEIS1:-1.41602575449;NFIL3:-1.430953776;IRF7:-1.43755331084;GZF1:-1.51064166147;EP300:-1.57326233493;STAT2,4,6:-1.59135384983;GLI1..3:-1.61548059701;TAL1_TCF{3,4,12}:-1.65076914677;TLX1..3_NFIC{dimer}:-1.66220884388;TGIF1:-1.66860215255;ATF6:-1.67321833894;MAFB:-1.90229604737;PDX1:-1.97771510505;SMAD1..7,9:-2.24592239245 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:13433-144E4;search_select_hide=table117:FF:13433-144E4 | |||
}} | }} | ||
Latest revision as of 18:59, 4 June 2020
| Name: | iPS differentiation to neuron, control donor C32-CRL1502 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13826 |
| Sample type: | time courses |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13826
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13826
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.135 |
| 10 | 10 | 0.143 |
| 100 | 100 | 0.63 |
| 101 | 101 | 0.682 |
| 102 | 102 | 0.66 |
| 103 | 103 | 0.0581 |
| 104 | 104 | 0.643 |
| 105 | 105 | 0.171 |
| 106 | 106 | 0.0485 |
| 107 | 107 | 0.335 |
| 108 | 108 | 0.94 |
| 109 | 109 | 0.288 |
| 11 | 11 | 0.19 |
| 110 | 110 | 0.212 |
| 111 | 111 | 0.0675 |
| 112 | 112 | 0.25 |
| 113 | 113 | 0.122 |
| 114 | 114 | 0.0435 |
| 115 | 115 | 0.209 |
| 116 | 116 | 0.731 |
| 117 | 117 | 0.322 |
| 118 | 118 | 0.51 |
| 119 | 119 | 0.216 |
| 12 | 12 | 0.977 |
| 120 | 120 | 0.863 |
| 121 | 121 | 0.675 |
| 122 | 122 | 0.789 |
| 123 | 123 | 0.856 |
| 124 | 124 | 0.232 |
| 125 | 125 | 0.656 |
| 126 | 126 | 0.413 |
| 127 | 127 | 0.303 |
| 128 | 128 | 0.34 |
| 129 | 129 | 0.217 |
| 13 | 13 | 0.768 |
| 130 | 130 | 0.628 |
| 131 | 131 | 0.72 |
| 132 | 132 | 0.929 |
| 133 | 133 | 0.0478 |
| 134 | 134 | 0.425 |
| 135 | 135 | 0.00142 |
| 136 | 136 | 0.0767 |
| 137 | 137 | 0.466 |
| 138 | 138 | 0.18 |
| 139 | 139 | 0.0187 |
| 14 | 14 | 0.661 |
| 140 | 140 | 0.0261 |
| 141 | 141 | 0.328 |
| 142 | 142 | 0.334 |
| 143 | 143 | 0.00462 |
| 144 | 144 | 0.609 |
| 145 | 145 | 0.62 |
| 146 | 146 | 0.457 |
| 147 | 147 | 0.679 |
| 148 | 148 | 0.0381 |
| 149 | 149 | 0.0153 |
| 15 | 15 | 0.0885 |
| 150 | 150 | 0.675 |
| 151 | 151 | 0.0885 |
| 152 | 152 | 0.69 |
| 153 | 153 | 0.151 |
| 154 | 154 | 0.56 |
| 155 | 155 | 0.949 |
| 156 | 156 | 0.387 |
| 157 | 157 | 0.556 |
| 158 | 158 | 0.164 |
| 159 | 159 | 0.221 |
| 16 | 16 | 0.392 |
| 160 | 160 | 0.447 |
| 161 | 161 | 0.666 |
| 162 | 162 | 0.349 |
| 163 | 163 | 0.428 |
| 164 | 164 | 0.335 |
| 165 | 165 | 0.415 |
| 166 | 166 | 0.871 |
| 167 | 167 | 0.147 |
| 168 | 168 | 0.19 |
| 169 | 169 | 7.60522e-4 |
| 17 | 17 | 0.172 |
| 18 | 18 | 0.134 |
| 19 | 19 | 0.138 |
| 2 | 2 | 0.416 |
| 20 | 20 | 0.904 |
| 21 | 21 | 0.746 |
| 22 | 22 | 0.109 |
| 23 | 23 | 0.0116 |
| 24 | 24 | 0.765 |
| 25 | 25 | 0.439 |
| 26 | 26 | 0.587 |
| 27 | 27 | 0.272 |
| 28 | 28 | 0.911 |
| 29 | 29 | 0.547 |
| 3 | 3 | 0.157 |
| 30 | 30 | 0.851 |
| 31 | 31 | 0.716 |
| 32 | 32 | 0.0922 |
| 33 | 33 | 0.954 |
| 34 | 34 | 0.509 |
| 35 | 35 | 0.23 |
| 36 | 36 | 0.506 |
| 37 | 37 | 0.225 |
| 38 | 38 | 0.261 |
| 39 | 39 | 0.804 |
| 4 | 4 | 0.552 |
| 40 | 40 | 0.909 |
| 41 | 41 | 0.0909 |
| 42 | 42 | 0.323 |
| 43 | 43 | 0.0988 |
| 44 | 44 | 0.931 |
| 45 | 45 | 0.386 |
| 46 | 46 | 0.0605 |
| 47 | 47 | 0.884 |
| 48 | 48 | 0.758 |
| 49 | 49 | 0.0887 |
| 5 | 5 | 0.08 |
| 50 | 50 | 0.928 |
| 51 | 51 | 0.401 |
| 52 | 52 | 0.368 |
| 53 | 53 | 0.453 |
| 54 | 54 | 0.32 |
| 55 | 55 | 0.0478 |
| 56 | 56 | 0.579 |
| 57 | 57 | 0.534 |
| 58 | 58 | 0.0608 |
| 59 | 59 | 0.161 |
| 6 | 6 | 0.879 |
| 60 | 60 | 0.0563 |
| 61 | 61 | 0.953 |
| 62 | 62 | 0.0176 |
| 63 | 63 | 0.178 |
| 64 | 64 | 0.467 |
| 65 | 65 | 0.0537 |
| 66 | 66 | 0.529 |
| 67 | 67 | 0.334 |
| 68 | 68 | 0.935 |
| 69 | 69 | 0.827 |
| 7 | 7 | 0.354 |
| 70 | 70 | 0.0141 |
| 71 | 71 | 0.0881 |
| 72 | 72 | 0.445 |
| 73 | 73 | 0.301 |
| 74 | 74 | 0.357 |
| 75 | 75 | 0.205 |
| 76 | 76 | 0.582 |
| 77 | 77 | 0.22 |
| 78 | 78 | 0.568 |
| 79 | 79 | 0.151 |
| 8 | 8 | 0.137 |
| 80 | 80 | 0.06 |
| 81 | 81 | 0.331 |
| 82 | 82 | 0.124 |
| 83 | 83 | 0.654 |
| 84 | 84 | 0.522 |
| 85 | 85 | 0.036 |
| 86 | 86 | 0.601 |
| 87 | 87 | 0.0923 |
| 88 | 88 | 0.756 |
| 89 | 89 | 0.0763 |
| 9 | 9 | 0.102 |
| 90 | 90 | 0.325 |
| 91 | 91 | 0.18 |
| 92 | 92 | 0.031 |
| 93 | 93 | 0.123 |
| 94 | 94 | 0.0817 |
| 95 | 95 | 0.961 |
| 96 | 96 | 0.0322 |
| 97 | 97 | 0.566 |
| 98 | 98 | 0.169 |
| 99 | 99 | 0.626 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13826
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)
FF: FANTOM5
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0200005 (iPS differentiation to neuron sample)
0200003 (iPS differentiation to neuron, control sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)
