FF:11758-123H3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005281 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008559;DRR009431;DRZ000856;DRZ002241;DRZ012206;DRZ013591 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000274 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor1.CNhs12374.11758-123H3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor1.CNhs12374.11758-123H3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor1.CNhs12374.11758-123H3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor1.CNhs12374.11758-123H3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520metastasis%252c%2520donor1.CNhs12374.11758-123H3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11758-123H3 | |id=FF:11758-123H3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000274 | ||
|is_obsolete= | |||
|library_id=CNhs12374 | |||
|library_id_phase_based=2:CNhs12374 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11758 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11758 | |||
|name=mesenchymal precursor cell - ovarian cancer metastasis, donor1 | |name=mesenchymal precursor cell - ovarian cancer metastasis, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12374,LSID914,release011,COMPLETED | |profile_hcage=CNhs12374,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=22.33715 | |rna_weight_ug=22.33715 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.54615029289658e-205!GO:0005737;cytoplasm;9.71101534402548e-197!GO:0043226;organelle;5.7406319415379e-154!GO:0043229;intracellular organelle;9.92745699160596e-154!GO:0043231;intracellular membrane-bound organelle;1.6433445365413e-152!GO:0043227;membrane-bound organelle;3.44145715718788e-152!GO:0044444;cytoplasmic part;2.33058631450693e-146!GO:0044422;organelle part;1.20972326525968e-122!GO:0044446;intracellular organelle part;3.26719627530474e-121!GO:0032991;macromolecular complex;6.32767208636913e-83!GO:0005515;protein binding;2.8098624554706e-76!GO:0030529;ribonucleoprotein complex;1.86067738141978e-74!GO:0044238;primary metabolic process;5.89998369444463e-69!GO:0044237;cellular metabolic process;2.54634169378163e-67!GO:0043170;macromolecule metabolic process;3.75133762941411e-64!GO:0043233;organelle lumen;1.9342344628992e-58!GO:0031974;membrane-enclosed lumen;1.9342344628992e-58!GO:0005739;mitochondrion;5.57375370219928e-57!GO:0031090;organelle membrane;6.06398079595143e-56!GO:0003723;RNA binding;1.25152294635023e-54!GO:0044428;nuclear part;9.1410695716189e-53!GO:0019538;protein metabolic process;1.29881752161552e-51!GO:0033036;macromolecule localization;6.69371278940481e-46!GO:0015031;protein transport;8.30415329731723e-46!GO:0044260;cellular macromolecule metabolic process;1.18861456023917e-45!GO:0005840;ribosome;2.70261493521544e-45!GO:0044267;cellular protein metabolic process;6.53676890089975e-45!GO:0006412;translation;7.09479707109481e-45!GO:0045184;establishment of protein localization;7.81593376407174e-44!GO:0008104;protein localization;1.62955303595882e-43!GO:0005634;nucleus;2.40407238714986e-42!GO:0016043;cellular component organization and biogenesis;6.51747210626164e-42!GO:0043234;protein complex;7.61485650875468e-41!GO:0003735;structural constituent of ribosome;1.32635024107185e-40!GO:0009058;biosynthetic process;2.23411428028108e-40!GO:0005829;cytosol;6.38377581900818e-40!GO:0044429;mitochondrial part;1.324061700002e-39!GO:0009059;macromolecule biosynthetic process;3.79304805891482e-39!GO:0006396;RNA processing;1.57666207140755e-38!GO:0031967;organelle envelope;1.08266138477315e-35!GO:0033279;ribosomal subunit;2.28088876738929e-35!GO:0031975;envelope;2.49806852012957e-35!GO:0046907;intracellular transport;2.13189743165503e-34!GO:0044249;cellular biosynthetic process;2.39772429843126e-34!GO:0031981;nuclear lumen;4.01390148376339e-32!GO:0016071;mRNA metabolic process;3.81250194993298e-30!GO:0008380;RNA splicing;4.59439643059049e-30!GO:0006886;intracellular protein transport;1.83199169804919e-29!GO:0043283;biopolymer metabolic process;1.92265270384965e-29!GO:0005740;mitochondrial envelope;1.94878987620103e-27!GO:0006397;mRNA processing;5.90771516825809e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.78057898071945e-26!GO:0005783;endoplasmic reticulum;3.29298259272988e-26!GO:0010467;gene expression;5.28684430355121e-26!GO:0031966;mitochondrial membrane;7.44116822875486e-26!GO:0012505;endomembrane system;2.82149653567108e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.22177621478503e-25!GO:0019866;organelle inner membrane;1.86541742130039e-24!GO:0065003;macromolecular complex assembly;3.85405269899553e-24!GO:0006119;oxidative phosphorylation;1.44080832201533e-23!GO:0005794;Golgi apparatus;2.20657843007003e-23!GO:0005743;mitochondrial inner membrane;3.77265674256477e-23!GO:0051649;establishment of cellular localization;4.73335408521834e-23!GO:0051641;cellular localization;6.14506496344828e-23!GO:0006457;protein folding;4.15941023765796e-22!GO:0006996;organelle organization and biogenesis;4.73368991775515e-22!GO:0043228;non-membrane-bound organelle;1.19879525910849e-21!GO:0043232;intracellular non-membrane-bound organelle;1.19879525910849e-21!GO:0044445;cytosolic part;1.40987515649171e-21!GO:0044455;mitochondrial membrane part;2.57862539996731e-21!GO:0022607;cellular component assembly;3.6835345728232e-21!GO:0005681;spliceosome;4.09954061864216e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.86787428821001e-21!GO:0044432;endoplasmic reticulum part;8.79931515017371e-20!GO:0048770;pigment granule;1.37489406679518e-19!GO:0042470;melanosome;1.37489406679518e-19!GO:0005654;nucleoplasm;3.07013053741144e-19!GO:0015934;large ribosomal subunit;3.55518161172545e-19!GO:0016462;pyrophosphatase activity;6.16607918431936e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.77916160831954e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;1.02164186250332e-18!GO:0005746;mitochondrial respiratory chain;4.61553437391338e-18!GO:0017111;nucleoside-triphosphatase activity;4.61553437391338e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.54361835264513e-17!GO:0015935;small ribosomal subunit;4.1011221170576e-17!GO:0000166;nucleotide binding;7.20538969081686e-17!GO:0000502;proteasome complex (sensu Eukaryota);1.20441043063578e-16!GO:0022618;protein-RNA complex assembly;1.88544069047302e-16!GO:0048193;Golgi vesicle transport;2.4722426646841e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.73749474652851e-16!GO:0003954;NADH dehydrogenase activity;4.73749474652851e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.73749474652851e-16!GO:0044451;nucleoplasm part;1.00992742097593e-15!GO:0051186;cofactor metabolic process;1.00992742097593e-15!GO:0016192;vesicle-mediated transport;3.59670908630392e-15!GO:0051082;unfolded protein binding;6.60765675216314e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;8.03393844146342e-15!GO:0031980;mitochondrial lumen;1.04034589362019e-14!GO:0005759;mitochondrial matrix;1.04034589362019e-14!GO:0044265;cellular macromolecule catabolic process;1.1401970246134e-14!GO:0008134;transcription factor binding;1.45563286194527e-14!GO:0019941;modification-dependent protein catabolic process;1.53259412194734e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.53259412194734e-14!GO:0006512;ubiquitin cycle;1.81029102669598e-14!GO:0044257;cellular protein catabolic process;1.95445916998682e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.23283249443778e-14!GO:0043285;biopolymer catabolic process;2.36469647606278e-14!GO:0006511;ubiquitin-dependent protein catabolic process;3.1533640143741e-14!GO:0006605;protein targeting;3.58644210246896e-14!GO:0030964;NADH dehydrogenase complex (quinone);3.58644210246896e-14!GO:0045271;respiratory chain complex I;3.58644210246896e-14!GO:0005747;mitochondrial respiratory chain complex I;3.58644210246896e-14!GO:0016874;ligase activity;4.29418454243836e-14!GO:0042775;organelle ATP synthesis coupled electron transport;4.75551518964842e-14!GO:0042773;ATP synthesis coupled electron transport;4.75551518964842e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.86121218261647e-14!GO:0008135;translation factor activity, nucleic acid binding;5.64929998118126e-14!GO:0009057;macromolecule catabolic process;5.79530248473638e-14!GO:0030163;protein catabolic process;7.39291207153163e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.70590365947436e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.13450390009933e-13!GO:0005793;ER-Golgi intermediate compartment;1.31242045611098e-13!GO:0005730;nucleolus;2.21452077912268e-13!GO:0005789;endoplasmic reticulum membrane;3.38401882006732e-13!GO:0043412;biopolymer modification;3.58614190740807e-13!GO:0006259;DNA metabolic process;4.7361871191504e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.70841171874769e-13!GO:0044248;cellular catabolic process;1.10953934425516e-12!GO:0032553;ribonucleotide binding;1.32350520791813e-12!GO:0032555;purine ribonucleotide binding;1.32350520791813e-12!GO:0005761;mitochondrial ribosome;1.41820351207435e-12!GO:0000313;organellar ribosome;1.41820351207435e-12!GO:0017076;purine nucleotide binding;1.54964800337564e-12!GO:0006732;coenzyme metabolic process;1.58394402426314e-12!GO:0009055;electron carrier activity;2.96770013946339e-12!GO:0007049;cell cycle;3.13636733124483e-12!GO:0012501;programmed cell death;3.79557001435195e-12!GO:0006464;protein modification process;4.02061470717277e-12!GO:0006915;apoptosis;8.77263091834948e-12!GO:0044431;Golgi apparatus part;1.0009848801156e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.29747313466205e-11!GO:0000375;RNA splicing, via transesterification reactions;3.29747313466205e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.29747313466205e-11!GO:0003743;translation initiation factor activity;6.50737942040656e-11!GO:0006413;translational initiation;1.0528627362052e-10!GO:0009259;ribonucleotide metabolic process;1.12104548667809e-10!GO:0048523;negative regulation of cellular process;1.17238227908386e-10!GO:0008219;cell death;1.93004480938218e-10!GO:0016265;death;1.93004480938218e-10!GO:0006163;purine nucleotide metabolic process;2.39214994066101e-10!GO:0009150;purine ribonucleotide metabolic process;2.39309062582847e-10!GO:0005768;endosome;3.19388654060241e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.30710317242556e-10!GO:0003712;transcription cofactor activity;9.15079333380572e-10!GO:0042254;ribosome biogenesis and assembly;9.64809954859743e-10!GO:0009199;ribonucleoside triphosphate metabolic process;9.94106661066448e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.37850746498779e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.37850746498779e-09!GO:0009141;nucleoside triphosphate metabolic process;1.39594519269085e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.44602731641492e-09!GO:0006164;purine nucleotide biosynthetic process;1.49341651001655e-09!GO:0005788;endoplasmic reticulum lumen;1.6775572873394e-09!GO:0006446;regulation of translational initiation;1.69419445149618e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.36088043141914e-09!GO:0005524;ATP binding;2.39699911003393e-09!GO:0009260;ribonucleotide biosynthetic process;2.5187320171296e-09!GO:0048519;negative regulation of biological process;2.58886719861124e-09!GO:0043687;post-translational protein modification;2.69476618047105e-09!GO:0000139;Golgi membrane;2.98163641806492e-09!GO:0005635;nuclear envelope;3.07041511602067e-09!GO:0022402;cell cycle process;3.25193438948796e-09!GO:0006888;ER to Golgi vesicle-mediated transport;3.42057540699638e-09!GO:0032559;adenyl ribonucleotide binding;4.72809480006229e-09!GO:0003924;GTPase activity;4.78435836839585e-09!GO:0008639;small protein conjugating enzyme activity;5.13823209290108e-09!GO:0003676;nucleic acid binding;5.41811582699304e-09!GO:0008565;protein transporter activity;6.28898964253665e-09!GO:0030554;adenyl nucleotide binding;6.8859017748158e-09!GO:0015986;ATP synthesis coupled proton transport;7.67822844818607e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.67822844818607e-09!GO:0009142;nucleoside triphosphate biosynthetic process;9.59118601011248e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.59118601011248e-09!GO:0019787;small conjugating protein ligase activity;9.74685953220534e-09!GO:0004842;ubiquitin-protein ligase activity;1.08040226653313e-08!GO:0031965;nuclear membrane;1.3239215318945e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.3239215318945e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.3239215318945e-08!GO:0046034;ATP metabolic process;1.4626168452091e-08!GO:0009060;aerobic respiration;1.6321902106937e-08!GO:0043069;negative regulation of programmed cell death;1.64864422402421e-08!GO:0016070;RNA metabolic process;2.07588411037524e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.19270887187124e-08!GO:0016491;oxidoreductase activity;2.58166072794371e-08!GO:0042623;ATPase activity, coupled;2.75789209241233e-08!GO:0016604;nuclear body;2.83888454125624e-08!GO:0043067;regulation of programmed cell death;3.31030365982317e-08!GO:0030120;vesicle coat;3.3607990954532e-08!GO:0030662;coated vesicle membrane;3.3607990954532e-08!GO:0016887;ATPase activity;3.45832333850071e-08!GO:0000074;regulation of progression through cell cycle;3.68976596083796e-08!GO:0006913;nucleocytoplasmic transport;3.69187960089072e-08!GO:0043066;negative regulation of apoptosis;4.71263208284683e-08!GO:0051726;regulation of cell cycle;4.78711416353371e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.78711416353371e-08!GO:0019829;cation-transporting ATPase activity;4.8905438110989e-08!GO:0042981;regulation of apoptosis;5.23924576108194e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.78843535230925e-08!GO:0051169;nuclear transport;6.57339980803379e-08!GO:0045333;cellular respiration;7.09808452844762e-08!GO:0016881;acid-amino acid ligase activity;8.20155175356698e-08!GO:0051246;regulation of protein metabolic process;9.15682545324444e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.38392629489515e-08!GO:0015078;hydrogen ion transmembrane transporter activity;9.38392629489515e-08!GO:0016023;cytoplasmic membrane-bound vesicle;9.48308088095553e-08!GO:0006916;anti-apoptosis;1.01328342908165e-07!GO:0006461;protein complex assembly;1.02445576720787e-07!GO:0031988;membrane-bound vesicle;1.07822866402245e-07!GO:0044453;nuclear membrane part;1.13662388221999e-07!GO:0006974;response to DNA damage stimulus;1.24201142775952e-07!GO:0006754;ATP biosynthetic process;1.250203706957e-07!GO:0006753;nucleoside phosphate metabolic process;1.250203706957e-07!GO:0009056;catabolic process;1.58245649499698e-07!GO:0048475;coated membrane;1.5917977325778e-07!GO:0030117;membrane coat;1.5917977325778e-07!GO:0051188;cofactor biosynthetic process;1.69158289833616e-07!GO:0006399;tRNA metabolic process;1.91566124128596e-07!GO:0017038;protein import;1.94421126131628e-07!GO:0006099;tricarboxylic acid cycle;3.11033010399674e-07!GO:0046356;acetyl-CoA catabolic process;3.11033010399674e-07!GO:0044440;endosomal part;3.461082036955e-07!GO:0010008;endosome membrane;3.461082036955e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.19788928521163e-07!GO:0005773;vacuole;4.23531323199627e-07!GO:0051187;cofactor catabolic process;4.29775757616166e-07!GO:0016607;nuclear speck;4.5848908565667e-07!GO:0030532;small nuclear ribonucleoprotein complex;5.21459078197676e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.55964742608201e-07!GO:0003714;transcription corepressor activity;7.64709256361158e-07!GO:0000278;mitotic cell cycle;7.65247187989922e-07!GO:0031252;leading edge;9.14105973404319e-07!GO:0007005;mitochondrion organization and biogenesis;9.62076830544794e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.87542528254147e-07!GO:0005770;late endosome;1.01167588123527e-06!GO:0006084;acetyl-CoA metabolic process;1.01555031830648e-06!GO:0009109;coenzyme catabolic process;1.02138110526618e-06!GO:0009117;nucleotide metabolic process;1.22100464020803e-06!GO:0005525;GTP binding;1.69237864450934e-06!GO:0016740;transferase activity;1.75378714865984e-06!GO:0031982;vesicle;1.77668244082203e-06!GO:0031410;cytoplasmic vesicle;1.88012012139457e-06!GO:0008026;ATP-dependent helicase activity;1.95206578697954e-06!GO:0016787;hydrolase activity;1.98886709189607e-06!GO:0004386;helicase activity;2.2411477357357e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.43405889751499e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.43405889751499e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.43405889751499e-06!GO:0043038;amino acid activation;2.57008759756044e-06!GO:0006418;tRNA aminoacylation for protein translation;2.57008759756044e-06!GO:0043039;tRNA aminoacylation;2.57008759756044e-06!GO:0006364;rRNA processing;2.81627292475268e-06!GO:0004298;threonine endopeptidase activity;3.08597452039041e-06!GO:0006752;group transfer coenzyme metabolic process;3.42031240993795e-06!GO:0009108;coenzyme biosynthetic process;3.58910327196465e-06!GO:0045259;proton-transporting ATP synthase complex;3.88130920987825e-06!GO:0005798;Golgi-associated vesicle;4.12417303793303e-06!GO:0006281;DNA repair;4.44060514806893e-06!GO:0016072;rRNA metabolic process;4.99578905602741e-06!GO:0016853;isomerase activity;5.08687315829512e-06!GO:0008654;phospholipid biosynthetic process;5.67700529835425e-06!GO:0000323;lytic vacuole;6.02202440606761e-06!GO:0005764;lysosome;6.02202440606761e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.10906657522549e-06!GO:0065002;intracellular protein transport across a membrane;6.11882058107521e-06!GO:0045786;negative regulation of progression through cell cycle;7.83939052602172e-06!GO:0050794;regulation of cellular process;8.2511359112735e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.36742514957957e-06!GO:0045454;cell redox homeostasis;9.76206845687056e-06!GO:0006613;cotranslational protein targeting to membrane;9.92690289124697e-06!GO:0016859;cis-trans isomerase activity;1.03284154765636e-05!GO:0032446;protein modification by small protein conjugation;1.12067450951801e-05!GO:0006366;transcription from RNA polymerase II promoter;1.12661493079772e-05!GO:0032561;guanyl ribonucleotide binding;1.35036314064571e-05!GO:0019001;guanyl nucleotide binding;1.35036314064571e-05!GO:0005643;nuclear pore;1.40861403847646e-05!GO:0016564;transcription repressor activity;1.59407169706807e-05!GO:0006091;generation of precursor metabolites and energy;1.81954638017206e-05!GO:0006793;phosphorus metabolic process;1.91963118711374e-05!GO:0006796;phosphate metabolic process;1.91963118711374e-05!GO:0009719;response to endogenous stimulus;2.08847937737372e-05!GO:0016567;protein ubiquitination;2.13996285121749e-05!GO:0015630;microtubule cytoskeleton;2.29269124710475e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.30513908757998e-05!GO:0000245;spliceosome assembly;2.45976699340696e-05!GO:0005769;early endosome;2.51260025561379e-05!GO:0051789;response to protein stimulus;2.59399309314845e-05!GO:0006986;response to unfolded protein;2.59399309314845e-05!GO:0005667;transcription factor complex;3.0588112079842e-05!GO:0003697;single-stranded DNA binding;3.06062876881823e-05!GO:0030867;rough endoplasmic reticulum membrane;3.57674473256597e-05!GO:0043566;structure-specific DNA binding;3.71983012249323e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;3.85009321212805e-05!GO:0051170;nuclear import;3.8928484281543e-05!GO:0033116;ER-Golgi intermediate compartment membrane;4.57111216655646e-05!GO:0005905;coated pit;4.6672743651153e-05!GO:0006612;protein targeting to membrane;5.65665238928539e-05!GO:0016310;phosphorylation;6.4896933031316e-05!GO:0005762;mitochondrial large ribosomal subunit;6.73850130078768e-05!GO:0000315;organellar large ribosomal subunit;6.73850130078768e-05!GO:0006606;protein import into nucleus;6.73850130078768e-05!GO:0030133;transport vesicle;6.94193858886914e-05!GO:0007243;protein kinase cascade;7.05348200874772e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.27386918134337e-05!GO:0030036;actin cytoskeleton organization and biogenesis;7.52868668094983e-05!GO:0019867;outer membrane;8.48326856187489e-05!GO:0006323;DNA packaging;8.6810355294283e-05!GO:0031968;organelle outer membrane;8.71834124222257e-05!GO:0046930;pore complex;8.99886922103122e-05!GO:0015980;energy derivation by oxidation of organic compounds;9.44504586959393e-05!GO:0000151;ubiquitin ligase complex;9.5049687408134e-05!GO:0005813;centrosome;9.6987426588663e-05!GO:0031324;negative regulation of cellular metabolic process;0.000101928579989949!GO:0044262;cellular carbohydrate metabolic process;0.000114240966350005!GO:0005791;rough endoplasmic reticulum;0.000131100809357904!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000132361373069429!GO:0051276;chromosome organization and biogenesis;0.000133165510290349!GO:0006260;DNA replication;0.000134139169556707!GO:0008361;regulation of cell size;0.000147852498716535!GO:0000087;M phase of mitotic cell cycle;0.000166135073217402!GO:0006403;RNA localization;0.000183631507866913!GO:0004576;oligosaccharyl transferase activity;0.000188637514268072!GO:0007067;mitosis;0.000216935727945891!GO:0016049;cell growth;0.000228711059166469!GO:0003724;RNA helicase activity;0.000230372470930133!GO:0050657;nucleic acid transport;0.000242612103705144!GO:0051236;establishment of RNA localization;0.000242612103705144!GO:0050658;RNA transport;0.000242612103705144!GO:0016779;nucleotidyltransferase activity;0.000244599730480422!GO:0008250;oligosaccharyl transferase complex;0.00025695995747694!GO:0005694;chromosome;0.000258205134861956!GO:0051301;cell division;0.000258205134861956!GO:0005885;Arp2/3 protein complex;0.000258205134861956!GO:0043021;ribonucleoprotein binding;0.000264448795981205!GO:0005048;signal sequence binding;0.000269090751359471!GO:0005815;microtubule organizing center;0.000269747058151883!GO:0046474;glycerophospholipid biosynthetic process;0.000280580816390855!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000291936511823257!GO:0030663;COPI coated vesicle membrane;0.000293753194704494!GO:0030126;COPI vesicle coat;0.000293753194704494!GO:0006891;intra-Golgi vesicle-mediated transport;0.000384657682706749!GO:0065004;protein-DNA complex assembly;0.000415903780830332!GO:0005741;mitochondrial outer membrane;0.000466690811099892!GO:0030029;actin filament-based process;0.000498554569470991!GO:0001558;regulation of cell growth;0.00050764553052141!GO:0016568;chromatin modification;0.000546845166740035!GO:0018196;peptidyl-asparagine modification;0.000562445644815338!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000562445644815338!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000596001903790724!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000599005983024302!GO:0003713;transcription coactivator activity;0.000601233291206939!GO:0009892;negative regulation of metabolic process;0.000612080648737535!GO:0016563;transcription activator activity;0.000646625379443747!GO:0050789;regulation of biological process;0.000701740599907802!GO:0007264;small GTPase mediated signal transduction;0.000723153358738192!GO:0019843;rRNA binding;0.000763074702517995!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000763444303868313!GO:0048522;positive regulation of cellular process;0.000782301533953828!GO:0022403;cell cycle phase;0.000782301533953828!GO:0000314;organellar small ribosomal subunit;0.000808628827665916!GO:0005763;mitochondrial small ribosomal subunit;0.000808628827665916!GO:0051920;peroxiredoxin activity;0.000808628827665916!GO:0030137;COPI-coated vesicle;0.000844624764787565!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000846774024260424!GO:0016044;membrane organization and biogenesis;0.000864432957440051!GO:0030176;integral to endoplasmic reticulum membrane;0.000879915066902092!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000899512144743971!GO:0046489;phosphoinositide biosynthetic process;0.000944585110694474!GO:0048471;perinuclear region of cytoplasm;0.000991401650678406!GO:0016126;sterol biosynthetic process;0.00100521524452048!GO:0043623;cellular protein complex assembly;0.00102695079883186!GO:0051427;hormone receptor binding;0.00109776651844472!GO:0009165;nucleotide biosynthetic process;0.00121209058403525!GO:0006333;chromatin assembly or disassembly;0.0013326569226243!GO:0044427;chromosomal part;0.00133410388749089!GO:0045045;secretory pathway;0.0013369261434424!GO:0019899;enzyme binding;0.00139946031568775!GO:0031072;heat shock protein binding;0.00140416007868005!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00143693273825241!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00143693273825241!GO:0015399;primary active transmembrane transporter activity;0.00143693273825241!GO:0006839;mitochondrial transport;0.00150059791595614!GO:0001726;ruffle;0.00153374573214449!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00153791992148696!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157817056302855!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157817056302855!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157817056302855!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00159516270575256!GO:0046467;membrane lipid biosynthetic process;0.00159781029899546!GO:0008092;cytoskeletal protein binding;0.00162814808399721!GO:0007050;cell cycle arrest;0.00166721161022508!GO:0043681;protein import into mitochondrion;0.00170042771338158!GO:0016197;endosome transport;0.00170386399627539!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00173655034337656!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00190797770194734!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00190797770194734!GO:0008047;enzyme activator activity;0.00201966623788203!GO:0035257;nuclear hormone receptor binding;0.00206247741556194!GO:0007010;cytoskeleton organization and biogenesis;0.00214338008819413!GO:0048500;signal recognition particle;0.00217684356836481!GO:0006626;protein targeting to mitochondrion;0.00232564518821483!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00237113615998884!GO:0032940;secretion by cell;0.002385121134377!GO:0030659;cytoplasmic vesicle membrane;0.00246170553659927!GO:0030027;lamellipodium;0.00249485531949095!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00249949871439105!GO:0051028;mRNA transport;0.00270432823363434!GO:0065009;regulation of a molecular function;0.00273716557526232!GO:0006414;translational elongation;0.0029826145037113!GO:0009967;positive regulation of signal transduction;0.00304086523384668!GO:0042802;identical protein binding;0.0031948090709481!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00320356412871777!GO:0030658;transport vesicle membrane;0.00320356412871777!GO:0016481;negative regulation of transcription;0.00330143592734667!GO:0006509;membrane protein ectodomain proteolysis;0.00350081278261187!GO:0033619;membrane protein proteolysis;0.00350081278261187!GO:0043284;biopolymer biosynthetic process;0.00351312613565155!GO:0030132;clathrin coat of coated pit;0.00356054771162654!GO:0022890;inorganic cation transmembrane transporter activity;0.00362560978478561!GO:0008243;plasminogen activator activity;0.00384933053462911!GO:0006497;protein amino acid lipidation;0.00386245327596313!GO:0000785;chromatin;0.00405440873083664!GO:0003899;DNA-directed RNA polymerase activity;0.00410099204533589!GO:0030134;ER to Golgi transport vesicle;0.00411743710374932!GO:0008610;lipid biosynthetic process;0.00417892552126441!GO:0048487;beta-tubulin binding;0.00424206102023634!GO:0008186;RNA-dependent ATPase activity;0.004245207760144!GO:0015631;tubulin binding;0.00449305755142463!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00452163859103134!GO:0045047;protein targeting to ER;0.00452163859103134!GO:0046519;sphingoid metabolic process;0.00454389111286338!GO:0044433;cytoplasmic vesicle part;0.00477797666651584!GO:0031418;L-ascorbic acid binding;0.00487001319695952!GO:0048468;cell development;0.00488298427094077!GO:0006740;NADPH regeneration;0.00491625266978619!GO:0006098;pentose-phosphate shunt;0.00491625266978619!GO:0030127;COPII vesicle coat;0.00505718380111861!GO:0012507;ER to Golgi transport vesicle membrane;0.00505718380111861!GO:0008180;signalosome;0.0050816490202199!GO:0046483;heterocycle metabolic process;0.00542045788913732!GO:0017166;vinculin binding;0.00556760682647153!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00560053805648321!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00563392180062573!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00563392180062573!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00563392180062573!GO:0006007;glucose catabolic process;0.00568780359394121!GO:0051252;regulation of RNA metabolic process;0.00575750272493612!GO:0031902;late endosome membrane;0.00600766762669778!GO:0031901;early endosome membrane;0.00603944752351037!GO:0007006;mitochondrial membrane organization and biogenesis;0.00609456521395382!GO:0015992;proton transport;0.00636873998199137!GO:0005869;dynactin complex;0.00636873998199137!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00653513038524236!GO:0008312;7S RNA binding;0.00655027581755498!GO:0006892;post-Golgi vesicle-mediated transport;0.00677448935853541!GO:0005684;U2-dependent spliceosome;0.00678382937370636!GO:0006818;hydrogen transport;0.00682170381241065!GO:0030118;clathrin coat;0.00707514524407065!GO:0006695;cholesterol biosynthetic process;0.00710202132007092!GO:0006979;response to oxidative stress;0.00712498785883594!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00730509557559156!GO:0015002;heme-copper terminal oxidase activity;0.00730509557559156!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00730509557559156!GO:0004129;cytochrome-c oxidase activity;0.00730509557559156!GO:0008632;apoptotic program;0.00731361218741522!GO:0043492;ATPase activity, coupled to movement of substances;0.00744470178404282!GO:0051329;interphase of mitotic cell cycle;0.00745822794394836!GO:0016272;prefoldin complex;0.00747989739323741!GO:0007040;lysosome organization and biogenesis;0.00796303959506019!GO:0016363;nuclear matrix;0.00796602344845134!GO:0006672;ceramide metabolic process;0.00819466874856663!GO:0003746;translation elongation factor activity;0.00820818809330092!GO:0006650;glycerophospholipid metabolic process;0.00831274185086701!GO:0003729;mRNA binding;0.00831274185086701!GO:0004177;aminopeptidase activity;0.00857817018820315!GO:0051087;chaperone binding;0.00870584453425624!GO:0030660;Golgi-associated vesicle membrane;0.00873501127577802!GO:0005096;GTPase activator activity;0.00879075943347643!GO:0031301;integral to organelle membrane;0.00895098919358102!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00919071044359287!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00926595960971697!GO:0005581;collagen;0.00929997654791686!GO:0003690;double-stranded DNA binding;0.00938852328967942!GO:0006383;transcription from RNA polymerase III promoter;0.00939375952669338!GO:0006595;polyamine metabolic process;0.00968405547621282!GO:0012506;vesicle membrane;0.00980827229222424!GO:0004004;ATP-dependent RNA helicase activity;0.00985572686429772!GO:0031543;peptidyl-proline dioxygenase activity;0.0100743344539386!GO:0007034;vacuolar transport;0.0101642138062858!GO:0006506;GPI anchor biosynthetic process;0.010289342997985!GO:0000339;RNA cap binding;0.0105953311530432!GO:0000279;M phase;0.0107908245919422!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0108280976981979!GO:0048144;fibroblast proliferation;0.0109181250959788!GO:0048145;regulation of fibroblast proliferation;0.0109181250959788!GO:0051168;nuclear export;0.0117388680950431!GO:0005862;muscle thin filament tropomyosin;0.0119379082846566!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0122615402510753!GO:0006417;regulation of translation;0.0122615402510753!GO:0022406;membrane docking;0.0129760012069944!GO:0048278;vesicle docking;0.0129760012069944!GO:0042158;lipoprotein biosynthetic process;0.0130844876062767!GO:0005774;vacuolar membrane;0.0134422605578924!GO:0019798;procollagen-proline dioxygenase activity;0.0134455760678732!GO:0051128;regulation of cellular component organization and biogenesis;0.013579489912592!GO:0006334;nucleosome assembly;0.0138902422000939!GO:0030880;RNA polymerase complex;0.0140647398668593!GO:0008139;nuclear localization sequence binding;0.0144372341024962!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0145199768123585!GO:0000059;protein import into nucleus, docking;0.0148969520297482!GO:0040008;regulation of growth;0.0149861805883696!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.015197584787142!GO:0031529;ruffle organization and biogenesis;0.0153732236968662!GO:0030384;phosphoinositide metabolic process;0.0154264233535675!GO:0030119;AP-type membrane coat adaptor complex;0.0154432908382481!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0154930074958598!GO:0008033;tRNA processing;0.0156657222456565!GO:0006354;RNA elongation;0.0157663573712009!GO:0006904;vesicle docking during exocytosis;0.0157663573712009!GO:0005801;cis-Golgi network;0.0159497194193574!GO:0043022;ribosome binding;0.0161210649909551!GO:0006505;GPI anchor metabolic process;0.0161649455314822!GO:0007033;vacuole organization and biogenesis;0.0163355065778781!GO:0030041;actin filament polymerization;0.0163524418102321!GO:0050811;GABA receptor binding;0.0174439606864453!GO:0051325;interphase;0.0179109991461163!GO:0007030;Golgi organization and biogenesis;0.0180680503054616!GO:0030833;regulation of actin filament polymerization;0.0180689455862121!GO:0030521;androgen receptor signaling pathway;0.0183005967369255!GO:0035258;steroid hormone receptor binding;0.0185634210332131!GO:0003711;transcription elongation regulator activity;0.0189234076564534!GO:0003756;protein disulfide isomerase activity;0.0190033518448599!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0190033518448599!GO:0005832;chaperonin-containing T-complex;0.0190033518448599!GO:0048146;positive regulation of fibroblast proliferation;0.0191332938456592!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0192437912190277!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0196638157048318!GO:0048518;positive regulation of biological process;0.0199988205266943!GO:0030433;ER-associated protein catabolic process;0.0206932953243456!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0206932953243456!GO:0000209;protein polyubiquitination;0.0211234230250664!GO:0051287;NAD binding;0.0212908401457477!GO:0030125;clathrin vesicle coat;0.0215602862506962!GO:0030665;clathrin coated vesicle membrane;0.0215602862506962!GO:0033673;negative regulation of kinase activity;0.0216749443261462!GO:0006469;negative regulation of protein kinase activity;0.0216749443261462!GO:0043488;regulation of mRNA stability;0.0222186635321727!GO:0043487;regulation of RNA stability;0.0222186635321727!GO:0030145;manganese ion binding;0.0228964534448377!GO:0016408;C-acyltransferase activity;0.0230657684055341!GO:0043433;negative regulation of transcription factor activity;0.023404827817537!GO:0005819;spindle;0.0237327177898926!GO:0005975;carbohydrate metabolic process;0.0238090830422407!GO:0008154;actin polymerization and/or depolymerization;0.0241902880755478!GO:0001872;zymosan binding;0.0242685213851446!GO:0001878;response to yeast;0.0242685213851446!GO:0000049;tRNA binding;0.0243613755277901!GO:0009225;nucleotide-sugar metabolic process;0.0244181623626542!GO:0030032;lamellipodium biogenesis;0.0244181623626542!GO:0065007;biological regulation;0.0244429120324258!GO:0044420;extracellular matrix part;0.0244429120324258!GO:0006739;NADP metabolic process;0.0245667857957365!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0246547570031723!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.025272505383935!GO:0000428;DNA-directed RNA polymerase complex;0.025272505383935!GO:0022408;negative regulation of cell-cell adhesion;0.025272505383935!GO:0031497;chromatin assembly;0.0256712135109019!GO:0007021;tubulin folding;0.0262366371373536!GO:0044452;nucleolar part;0.0267309369946372!GO:0050662;coenzyme binding;0.0273361156997169!GO:0030131;clathrin adaptor complex;0.0277124134151375!GO:0001952;regulation of cell-matrix adhesion;0.0279646297851037!GO:0006769;nicotinamide metabolic process;0.0280078540356948!GO:0019318;hexose metabolic process;0.0287206124538335!GO:0006984;ER-nuclear signaling pathway;0.0287206124538335!GO:0000096;sulfur amino acid metabolic process;0.0287640980876192!GO:0044437;vacuolar part;0.0293254373564466!GO:0051348;negative regulation of transferase activity;0.0293254373564466!GO:0004656;procollagen-proline 4-dioxygenase activity;0.029655949537432!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.029655949537432!GO:0051540;metal cluster binding;0.029999180291001!GO:0051536;iron-sulfur cluster binding;0.029999180291001!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0305740816235913!GO:0033043;regulation of organelle organization and biogenesis;0.0305740816235913!GO:0005874;microtubule;0.0313148393734188!GO:0006778;porphyrin metabolic process;0.0321479323699853!GO:0033013;tetrapyrrole metabolic process;0.0321479323699853!GO:0006352;transcription initiation;0.0321479323699853!GO:0006458;'de novo' protein folding;0.0325777443573917!GO:0051084;'de novo' posttranslational protein folding;0.0325777443573917!GO:0045792;negative regulation of cell size;0.0328546387193644!GO:0031371;ubiquitin conjugating enzyme complex;0.0333431390935939!GO:0051101;regulation of DNA binding;0.0341078512836929!GO:0005586;collagen type III;0.0344212488903639!GO:0050790;regulation of catalytic activity;0.0346044055587598!GO:0016860;intramolecular oxidoreductase activity;0.034844944126432!GO:0005637;nuclear inner membrane;0.0350691245397559!GO:0035035;histone acetyltransferase binding;0.0350691245397559!GO:0005996;monosaccharide metabolic process;0.0350810492403761!GO:0030308;negative regulation of cell growth;0.0364479379839184!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0365856930798591!GO:0033559;unsaturated fatty acid metabolic process;0.0369046189050991!GO:0006636;unsaturated fatty acid biosynthetic process;0.0369046189050991!GO:0005583;fibrillar collagen;0.036972010395521!GO:0051272;positive regulation of cell motility;0.036972010395521!GO:0040017;positive regulation of locomotion;0.036972010395521!GO:0006118;electron transport;0.0373724572338681!GO:0006950;response to stress;0.0376967728345978!GO:0050681;androgen receptor binding;0.0378502453927036!GO:0030508;thiol-disulfide exchange intermediate activity;0.0378502453927036!GO:0007041;lysosomal transport;0.037904986115652!GO:0006790;sulfur metabolic process;0.0379197144403906!GO:0030984;kininogen binding;0.0379197144403906!GO:0004213;cathepsin B activity;0.0379197144403906!GO:0001953;negative regulation of cell-matrix adhesion;0.0380362581594217!GO:0042168;heme metabolic process;0.0381793045685956!GO:0005765;lysosomal membrane;0.0385304869688264!GO:0003923;GPI-anchor transamidase activity;0.0387596550371148!GO:0016255;attachment of GPI anchor to protein;0.0387596550371148!GO:0042765;GPI-anchor transamidase complex;0.0387596550371148!GO:0031326;regulation of cellular biosynthetic process;0.0394996493674137!GO:0030149;sphingolipid catabolic process;0.0396445237373951!GO:0004287;prolyl oligopeptidase activity;0.0397219991577389!GO:0000082;G1/S transition of mitotic cell cycle;0.0397219991577389!GO:0009112;nucleobase metabolic process;0.0397219991577389!GO:0006767;water-soluble vitamin metabolic process;0.0402242182502708!GO:0008234;cysteine-type peptidase activity;0.0406009354047356!GO:0006289;nucleotide-excision repair;0.0406223080309839!GO:0016251;general RNA polymerase II transcription factor activity;0.0408393516944727!GO:0043065;positive regulation of apoptosis;0.0409624200111271!GO:0008637;apoptotic mitochondrial changes;0.0414898946674219!GO:0006914;autophagy;0.0418546639039633!GO:0051098;regulation of binding;0.0421254573978441!GO:0019752;carboxylic acid metabolic process;0.0421254573978441!GO:0006082;organic acid metabolic process;0.0429407255991966!GO:0043068;positive regulation of programmed cell death;0.0433686944972883!GO:0030911;TPR domain binding;0.0438102483166796!GO:0045936;negative regulation of phosphate metabolic process;0.0438102483166796!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0440517857371403!GO:0015923;mannosidase activity;0.0441298089294001!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0441715563043621!GO:0031625;ubiquitin protein ligase binding;0.0443660191961589!GO:0045892;negative regulation of transcription, DNA-dependent;0.0443660191961589!GO:0008538;proteasome activator activity;0.0443704521444432!GO:0008601;protein phosphatase type 2A regulator activity;0.0443704521444432!GO:0009889;regulation of biosynthetic process;0.0449454671655893!GO:0046365;monosaccharide catabolic process;0.0451157946037462!GO:0030503;regulation of cell redox homeostasis;0.0453870362084462!GO:0031124;mRNA 3'-end processing;0.0454655710705784!GO:0006096;glycolysis;0.0457716562852856!GO:0019206;nucleoside kinase activity;0.0459988640763508!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0461148290024633!GO:0006897;endocytosis;0.046366047488605!GO:0010324;membrane invagination;0.046366047488605!GO:0001527;microfibril;0.0472377638251543!GO:0030031;cell projection biogenesis;0.0480135939693928!GO:0000075;cell cycle checkpoint;0.0481737714923583!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0489183219470099!GO:0006002;fructose 6-phosphate metabolic process;0.0494615735354843 | |||
|sample_id=11758 | |sample_id=11758 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=TAL1_TCF{3,4,12}:2.00565519604;HOX{A5,B5}:1.83875834371;HSF1,2:1.64559556243;EN1,2:1.55093963752;UFEwm:1.50798701702;POU3F1..4:1.46548781448;HMGA1,2:1.3685718148;XBP1:1.35714261215;PAX4:1.3541246862;ALX4:1.22460619518;GZF1:1.11258733382;ESR1:1.09855181263;PAX1,9:1.06846198172;EVI1:1.06817653403;SRF:1.05356107094;NFE2L1:1.03162975444;DBP:1.01991767651;AIRE:1.00869241818;NFATC1..3:0.986913235096;MYBL2:0.914453131977;TP53:0.889294096532;GLI1..3:0.845475382504;NKX3-2:0.842169622764;NKX3-1:0.834086412211;NFE2L2:0.822135782981;RXRA_VDR{dimer}:0.808583148319;ZIC1..3:0.808230666651;ATF6:0.805737835753;KLF4:0.76370444332;FOXM1:0.760337449707;ALX1:0.74192917903;TEAD1:0.740571507196;TBX4,5:0.730814982573;NR3C1:0.730462729214;GATA4:0.729126740906;HES1:0.724779330666;HOX{A4,D4}:0.720951197201;HIF1A:0.718519217479;NKX2-2,8:0.691003690864;CDC5L:0.665208851358;ZBTB16:0.648310405669;ARID5B:0.64722221565;ZNF238:0.641538765922;XCPE1{core}:0.618404884399;IKZF1:0.608154637617;TLX1..3_NFIC{dimer}:0.603373633083;ZNF384:0.553464653549;PRDM1:0.538258449729;POU6F1:0.497293053239;PAX6:0.496277016898;SOX17:0.488999476646;FOX{I1,J2}:0.488766572725;AR:0.482536415052;MAFB:0.479312881473;HLF:0.478459942127;ZBTB6:0.471539738138;EBF1:0.463331604301;TEF:0.45617988075;MTE{core}:0.446518867561;PPARG:0.437339148719;BACH2:0.414055415779;GTF2I:0.403731900871;RXR{A,B,G}:0.358755096934;GFI1B:0.358580216844;TFCP2:0.357519336141;NFIX:0.326590426187;GCM1,2:0.301165314026;FOS_FOS{B,L1}_JUN{B,D}:0.291229875626;TLX2:0.267303670322;CRX:0.265810119082;PAX8:0.257030565283;FOSL2:0.215976639613;HMX1:0.214094715824;TFAP4:0.198789370711;NKX2-1,4:0.184192836625;RUNX1..3:0.178049185639;STAT2,4,6:0.177904295051;ZNF148:0.163223394746;AHR_ARNT_ARNT2:0.162775181674;GTF2A1,2:0.158876763127;TFAP2B:0.140974437432;RFX1:0.131256169852;SMAD1..7,9:0.121961062612;MZF1:0.120667362846;NR6A1:0.115494185405;MAZ:0.0909118023183;HAND1,2:0.0838288915535;ELK1,4_GABP{A,B1}:0.0770358311008;LHX3,4:0.0721080283623;ONECUT1,2:0.0691381597542;FOXL1:0.067441165595;TBP:0.0635359655789;NFE2:0.058580710602;HOX{A6,A7,B6,B7}:0.0530027999219;HBP1_HMGB_SSRP1_UBTF:0.0469133309982;STAT5{A,B}:0.0467978972265;PAX2:-0.00383985554402;CDX1,2,4:-0.0136268375602;HNF1A:-0.0157924505856;NHLH1,2:-0.0181710572617;bHLH_family:-0.0228994140447;POU1F1:-0.0364777495088;HIC1:-0.0463017430628;OCT4_SOX2{dimer}:-0.0572260024069;IRF1,2:-0.0677894467304;SOX2:-0.0767032356777;NANOG{mouse}:-0.0814676968202;IRF7:-0.0823286687145;POU5F1:-0.109792406789;PAX5:-0.113190282936;ZFP161:-0.163761505599;LEF1_TCF7_TCF7L1,2:-0.166276207756;SP1:-0.170152817848;TFAP2{A,C}:-0.181745303544;NFIL3:-0.192181339992;DMAP1_NCOR{1,2}_SMARC:-0.204127294485;EGR1..3:-0.209944024559;ADNP_IRX_SIX_ZHX:-0.213270195414;MYFfamily:-0.218491703677;FOXP3:-0.233900579535;PATZ1:-0.251588145716;REST:-0.253785763014;FOXA2:-0.259487454988;JUN:-0.266969159196;ZNF423:-0.26890809019;PAX3,7:-0.269709965001;FOXD3:-0.274526400274;RREB1:-0.277294071173;FOXO1,3,4:-0.283587741513;SPZ1:-0.289169496578;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.290954391382;CREB1:-0.296516529096;MYB:-0.302351056694;EP300:-0.309336888349;ZNF143:-0.311162951425;MEF2{A,B,C,D}:-0.315041477147;GATA6:-0.322406778465;CEBPA,B_DDIT3:-0.343492953445;NFKB1_REL_RELA:-0.3439920728;YY1:-0.361587338966;NRF1:-0.36774059751;LMO2:-0.368954880714;TGIF1:-0.380115835632;PRRX1,2:-0.388213289251;TOPORS:-0.390832842291;TFDP1:-0.397693866151;ELF1,2,4:-0.417644062303;HNF4A_NR2F1,2:-0.424769859975;SPI1:-0.435109579659;GFI1:-0.457958879648;SREBF1,2:-0.468569528814;ETS1,2:-0.499480086;ESRRA:-0.5204203313;NR1H4:-0.522587419414;MED-1{core}:-0.53435109478;BPTF:-0.537296031052;FOXN1:-0.540142665397;FOX{D1,D2}:-0.56158061746;SNAI1..3:-0.567764822681;SOX5:-0.603054563689;SPIB:-0.625668123886;MTF1:-0.695351307218;ATF2:-0.697087596738;FOXP1:-0.747661962941;E2F1..5:-0.750891233139;PBX1:-0.783815101172;ZEB1:-0.789834332091;SOX{8,9,10}:-0.798280344204;T:-0.807512774405;ATF5_CREB3:-0.816421034621;CUX2:-0.834631756858;NR5A1,2:-0.85163319283;NKX6-1,2:-0.852765076993;STAT1,3:-0.866726255525;IKZF2:-0.876462531694;MYOD1:-0.906808309394;RORA:-0.944916482158;HOXA9_MEIS1:-0.985031025155;ATF4:-0.985117542287;FOXQ1:-1.00895348204;NFY{A,B,C}:-1.0467429841;RFX2..5_RFXANK_RFXAP:-1.04963007831;NANOG:-1.07766692315;VSX1,2:-1.08837141416;FOX{F1,F2,J1}:-1.08967239617;PITX1..3:-1.09132605901;PDX1:-1.18584674742;POU2F1..3:-1.21707647698;BREu{core}:-1.22953654175;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.33876084964;NKX2-3_NKX2-5:-1.35154340314;RBPJ:-1.41967256066 | |top_motifs=TAL1_TCF{3,4,12}:2.00565519604;HOX{A5,B5}:1.83875834371;HSF1,2:1.64559556243;EN1,2:1.55093963752;UFEwm:1.50798701702;POU3F1..4:1.46548781448;HMGA1,2:1.3685718148;XBP1:1.35714261215;PAX4:1.3541246862;ALX4:1.22460619518;GZF1:1.11258733382;ESR1:1.09855181263;PAX1,9:1.06846198172;EVI1:1.06817653403;SRF:1.05356107094;NFE2L1:1.03162975444;DBP:1.01991767651;AIRE:1.00869241818;NFATC1..3:0.986913235096;MYBL2:0.914453131977;TP53:0.889294096532;GLI1..3:0.845475382504;NKX3-2:0.842169622764;NKX3-1:0.834086412211;NFE2L2:0.822135782981;RXRA_VDR{dimer}:0.808583148319;ZIC1..3:0.808230666651;ATF6:0.805737835753;KLF4:0.76370444332;FOXM1:0.760337449707;ALX1:0.74192917903;TEAD1:0.740571507196;TBX4,5:0.730814982573;NR3C1:0.730462729214;GATA4:0.729126740906;HES1:0.724779330666;HOX{A4,D4}:0.720951197201;HIF1A:0.718519217479;NKX2-2,8:0.691003690864;CDC5L:0.665208851358;ZBTB16:0.648310405669;ARID5B:0.64722221565;ZNF238:0.641538765922;XCPE1{core}:0.618404884399;IKZF1:0.608154637617;TLX1..3_NFIC{dimer}:0.603373633083;ZNF384:0.553464653549;PRDM1:0.538258449729;POU6F1:0.497293053239;PAX6:0.496277016898;SOX17:0.488999476646;FOX{I1,J2}:0.488766572725;AR:0.482536415052;MAFB:0.479312881473;HLF:0.478459942127;ZBTB6:0.471539738138;EBF1:0.463331604301;TEF:0.45617988075;MTE{core}:0.446518867561;PPARG:0.437339148719;BACH2:0.414055415779;GTF2I:0.403731900871;RXR{A,B,G}:0.358755096934;GFI1B:0.358580216844;TFCP2:0.357519336141;NFIX:0.326590426187;GCM1,2:0.301165314026;FOS_FOS{B,L1}_JUN{B,D}:0.291229875626;TLX2:0.267303670322;CRX:0.265810119082;PAX8:0.257030565283;FOSL2:0.215976639613;HMX1:0.214094715824;TFAP4:0.198789370711;NKX2-1,4:0.184192836625;RUNX1..3:0.178049185639;STAT2,4,6:0.177904295051;ZNF148:0.163223394746;AHR_ARNT_ARNT2:0.162775181674;GTF2A1,2:0.158876763127;TFAP2B:0.140974437432;RFX1:0.131256169852;SMAD1..7,9:0.121961062612;MZF1:0.120667362846;NR6A1:0.115494185405;MAZ:0.0909118023183;HAND1,2:0.0838288915535;ELK1,4_GABP{A,B1}:0.0770358311008;LHX3,4:0.0721080283623;ONECUT1,2:0.0691381597542;FOXL1:0.067441165595;TBP:0.0635359655789;NFE2:0.058580710602;HOX{A6,A7,B6,B7}:0.0530027999219;HBP1_HMGB_SSRP1_UBTF:0.0469133309982;STAT5{A,B}:0.0467978972265;PAX2:-0.00383985554402;CDX1,2,4:-0.0136268375602;HNF1A:-0.0157924505856;NHLH1,2:-0.0181710572617;bHLH_family:-0.0228994140447;POU1F1:-0.0364777495088;HIC1:-0.0463017430628;OCT4_SOX2{dimer}:-0.0572260024069;IRF1,2:-0.0677894467304;SOX2:-0.0767032356777;NANOG{mouse}:-0.0814676968202;IRF7:-0.0823286687145;POU5F1:-0.109792406789;PAX5:-0.113190282936;ZFP161:-0.163761505599;LEF1_TCF7_TCF7L1,2:-0.166276207756;SP1:-0.170152817848;TFAP2{A,C}:-0.181745303544;NFIL3:-0.192181339992;DMAP1_NCOR{1,2}_SMARC:-0.204127294485;EGR1..3:-0.209944024559;ADNP_IRX_SIX_ZHX:-0.213270195414;MYFfamily:-0.218491703677;FOXP3:-0.233900579535;PATZ1:-0.251588145716;REST:-0.253785763014;FOXA2:-0.259487454988;JUN:-0.266969159196;ZNF423:-0.26890809019;PAX3,7:-0.269709965001;FOXD3:-0.274526400274;RREB1:-0.277294071173;FOXO1,3,4:-0.283587741513;SPZ1:-0.289169496578;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.290954391382;CREB1:-0.296516529096;MYB:-0.302351056694;EP300:-0.309336888349;ZNF143:-0.311162951425;MEF2{A,B,C,D}:-0.315041477147;GATA6:-0.322406778465;CEBPA,B_DDIT3:-0.343492953445;NFKB1_REL_RELA:-0.3439920728;YY1:-0.361587338966;NRF1:-0.36774059751;LMO2:-0.368954880714;TGIF1:-0.380115835632;PRRX1,2:-0.388213289251;TOPORS:-0.390832842291;TFDP1:-0.397693866151;ELF1,2,4:-0.417644062303;HNF4A_NR2F1,2:-0.424769859975;SPI1:-0.435109579659;GFI1:-0.457958879648;SREBF1,2:-0.468569528814;ETS1,2:-0.499480086;ESRRA:-0.5204203313;NR1H4:-0.522587419414;MED-1{core}:-0.53435109478;BPTF:-0.537296031052;FOXN1:-0.540142665397;FOX{D1,D2}:-0.56158061746;SNAI1..3:-0.567764822681;SOX5:-0.603054563689;SPIB:-0.625668123886;MTF1:-0.695351307218;ATF2:-0.697087596738;FOXP1:-0.747661962941;E2F1..5:-0.750891233139;PBX1:-0.783815101172;ZEB1:-0.789834332091;SOX{8,9,10}:-0.798280344204;T:-0.807512774405;ATF5_CREB3:-0.816421034621;CUX2:-0.834631756858;NR5A1,2:-0.85163319283;NKX6-1,2:-0.852765076993;STAT1,3:-0.866726255525;IKZF2:-0.876462531694;MYOD1:-0.906808309394;RORA:-0.944916482158;HOXA9_MEIS1:-0.985031025155;ATF4:-0.985117542287;FOXQ1:-1.00895348204;NFY{A,B,C}:-1.0467429841;RFX2..5_RFXANK_RFXAP:-1.04963007831;NANOG:-1.07766692315;VSX1,2:-1.08837141416;FOX{F1,F2,J1}:-1.08967239617;PITX1..3:-1.09132605901;PDX1:-1.18584674742;POU2F1..3:-1.21707647698;BREu{core}:-1.22953654175;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.33876084964;NKX2-3_NKX2-5:-1.35154340314;RBPJ:-1.41967256066 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11758-123H3;search_select_hide=table117:FF:11758-123H3 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer metastasis, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12374 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12374
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12374
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.421 |
| 10 | 10 | 0.712 |
| 100 | 100 | 0.527 |
| 101 | 101 | 0.761 |
| 102 | 102 | 0.494 |
| 103 | 103 | 0.206 |
| 104 | 104 | 0.972 |
| 105 | 105 | 0.281 |
| 106 | 106 | 0.0697 |
| 107 | 107 | 0.0294 |
| 108 | 108 | 0.288 |
| 109 | 109 | 0.384 |
| 11 | 11 | 0.238 |
| 110 | 110 | 0.103 |
| 111 | 111 | 0.8 |
| 112 | 112 | 0.33 |
| 113 | 113 | 0.0211 |
| 114 | 114 | 0.0865 |
| 115 | 115 | 0.134 |
| 116 | 116 | 0.11 |
| 117 | 117 | 0.509 |
| 118 | 118 | 0.852 |
| 119 | 119 | 0.472 |
| 12 | 12 | 0.285 |
| 120 | 120 | 0.15 |
| 121 | 121 | 0.749 |
| 122 | 122 | 0.0936 |
| 123 | 123 | 0.00198 |
| 124 | 124 | 0.674 |
| 125 | 125 | 0.655 |
| 126 | 126 | 0.811 |
| 127 | 127 | 0.296 |
| 128 | 128 | 0.0737 |
| 129 | 129 | 0.852 |
| 13 | 13 | 0.959 |
| 130 | 130 | 0.386 |
| 131 | 131 | 0.135 |
| 132 | 132 | 0.398 |
| 133 | 133 | 0.45 |
| 134 | 134 | 0.343 |
| 135 | 135 | 0.947 |
| 136 | 136 | 0.623 |
| 137 | 137 | 0.607 |
| 138 | 138 | 0.763 |
| 139 | 139 | 0.278 |
| 14 | 14 | 0.203 |
| 140 | 140 | 0.657 |
| 141 | 141 | 0.263 |
| 142 | 142 | 0.612 |
| 143 | 143 | 0.0874 |
| 144 | 144 | 0.541 |
| 145 | 145 | 0.485 |
| 146 | 146 | 0.814 |
| 147 | 147 | 0.0605 |
| 148 | 148 | 0.534 |
| 149 | 149 | 0.174 |
| 15 | 15 | 0.486 |
| 150 | 150 | 0.134 |
| 151 | 151 | 0.767 |
| 152 | 152 | 0.0547 |
| 153 | 153 | 0.367 |
| 154 | 154 | 0.977 |
| 155 | 155 | 0.0279 |
| 156 | 156 | 0.511 |
| 157 | 157 | 0.572 |
| 158 | 158 | 0.0407 |
| 159 | 159 | 0.159 |
| 16 | 16 | 0.0211 |
| 160 | 160 | 0.494 |
| 161 | 161 | 0.49 |
| 162 | 162 | 0.572 |
| 163 | 163 | 0.231 |
| 164 | 164 | 0.0823 |
| 165 | 165 | 0.88 |
| 166 | 166 | 0.0646 |
| 167 | 167 | 0.864 |
| 168 | 168 | 0.683 |
| 169 | 169 | 0.121 |
| 17 | 17 | 0.168 |
| 18 | 18 | 0.092 |
| 19 | 19 | 0.0629 |
| 2 | 2 | 0.649 |
| 20 | 20 | 0.586 |
| 21 | 21 | 0.469 |
| 22 | 22 | 0.357 |
| 23 | 23 | 0.0208 |
| 24 | 24 | 0.952 |
| 25 | 25 | 0.256 |
| 26 | 26 | 0.455 |
| 27 | 27 | 0.467 |
| 28 | 28 | 0.404 |
| 29 | 29 | 0.0935 |
| 3 | 3 | 0.299 |
| 30 | 30 | 0.629 |
| 31 | 31 | 0.561 |
| 32 | 32 | 5.50552e-10 |
| 33 | 33 | 0.76 |
| 34 | 34 | 0.85 |
| 35 | 35 | 0.441 |
| 36 | 36 | 0.0496 |
| 37 | 37 | 0.026 |
| 38 | 38 | 0.614 |
| 39 | 39 | 0.21 |
| 4 | 4 | 0.792 |
| 40 | 40 | 0.339 |
| 41 | 41 | 0.88 |
| 42 | 42 | 0.872 |
| 43 | 43 | 0.203 |
| 44 | 44 | 0.197 |
| 45 | 45 | 0.907 |
| 46 | 46 | 0.182 |
| 47 | 47 | 0.754 |
| 48 | 48 | 0.542 |
| 49 | 49 | 0.994 |
| 5 | 5 | 0.555 |
| 50 | 50 | 0.831 |
| 51 | 51 | 0.974 |
| 52 | 52 | 0.927 |
| 53 | 53 | 0.0596 |
| 54 | 54 | 0.811 |
| 55 | 55 | 0.112 |
| 56 | 56 | 0.928 |
| 57 | 57 | 0.914 |
| 58 | 58 | 0.519 |
| 59 | 59 | 0.178 |
| 6 | 6 | 0.536 |
| 60 | 60 | 0.701 |
| 61 | 61 | 0.689 |
| 62 | 62 | 0.576 |
| 63 | 63 | 0.424 |
| 64 | 64 | 0.73 |
| 65 | 65 | 0.439 |
| 66 | 66 | 0.29 |
| 67 | 67 | 0.293 |
| 68 | 68 | 0.995 |
| 69 | 69 | 0.47 |
| 7 | 7 | 0.226 |
| 70 | 70 | 0.171 |
| 71 | 71 | 0.383 |
| 72 | 72 | 0.906 |
| 73 | 73 | 0.0215 |
| 74 | 74 | 0.0991 |
| 75 | 75 | 0.362 |
| 76 | 76 | 0.593 |
| 77 | 77 | 0.0673 |
| 78 | 78 | 0.688 |
| 79 | 79 | 0.00473 |
| 8 | 8 | 0.0627 |
| 80 | 80 | 0.935 |
| 81 | 81 | 0.543 |
| 82 | 82 | 0.419 |
| 83 | 83 | 0.877 |
| 84 | 84 | 0.67 |
| 85 | 85 | 0.0947 |
| 86 | 86 | 0.948 |
| 87 | 87 | 0.282 |
| 88 | 88 | 0.883 |
| 89 | 89 | 0.0271 |
| 9 | 9 | 0.469 |
| 90 | 90 | 0.433 |
| 91 | 91 | 0.514 |
| 92 | 92 | 0.0386 |
| 93 | 93 | 0.995 |
| 94 | 94 | 0.385 |
| 95 | 95 | 0.225 |
| 96 | 96 | 0.803 |
| 97 | 97 | 0.204 |
| 98 | 98 | 0.0591 |
| 99 | 99 | 0.00312 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12374
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000274 human mesenchymal precursor cell- ovarian cancer-metastasis sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000274 (human mesenchymal precursor cell- ovarian cancer-metastasis sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
