Personal tools

FF:12151-128F9: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(23 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=CAGE@SAMD00005465
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000236,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000826,CL:0000837,CL:0000838,CL:0000945,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371
|accession_numbers=CAGE;DRX008053;DRR008925;DRZ000350;DRZ001735;DRZ011700;DRZ013085
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|
|expression_enrichment_score=
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 35: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12531.12151-128F9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12531.12151-128F9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12531.12151-128F9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12531.12151-128F9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation1.CNhs12531.12151-128F9.hg38.nobarcode.ctss.bed.gz
|id=FF:12151-128F9
|id=FF:12151-128F9
|is_a=EFO:0002091;;FF:0000002;;FF:0000025;;FF:0000210
|is_a=EFO:0002091;;FF:0000025;;FF:0000210
|is_obsolete=
|library_id=CNhs12531
|library_id_phase_based=2:CNhs12531
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12151
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12151
|name=CD19+ B Cells (pluriselect), donor090325, donation1
|name=CD19+ B Cells (pluriselect), donor090325, donation1
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12531,LSID919,release012,COMPLETED
|profile_hcage=CNhs12531,LSID919,release012,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,1.38099646001754,0,0,0,0,0,0.197653133785822,0.154341861042433,-0.27483329820609,-0.205232630055726,0,0,0,0.154341861042433,0,0,0,0,0,0.551496515666778,0,0,0,0.00101885069400554,0,0,0,0,0.721588237889094,-0.0979578962680575,0,0,0.363094052575119,0,0,0,0,0,0,0,0,0,0,0.267983322146663,0,-0.0049768178567113,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.267983322146663,0,-0.0487187892617902,0,-0.0969923612426051,0,0,-0.097343627213097,0,0.0771709305212165,0,0,0,0,0.154341861042433,0,0,0,1.29614130374078,0,0,0.154341861042433,0,0,0,0,0.0771709305212165,0,0,0,0,-0.000809573406919784,-0.096739210222103,0,0,0,-0.129136418410966,-0.077205741622537,0,0,0,0,0.169947970908957,-0.0613062702796785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.124307696593413,0.0754860083355829,0,0,0,0,0,0
|repeat_enrich_byname=0,0,0,0,0.169947970908957,0,0,0.357971163872208,0,0.154341861042433,0,0,0,0,0,0,-0.247178875285564,0,-0.319744357709575,0.0108267185189613,0,0.154341861042433,0.1113670755909,0,0,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,-0.305472230898407,0,-0.0970871306282935,0.085997599965065,0,0,0,0,-0.0540028874821265,0,-0.120879483793741,-0.0827201683234173,0.163649965345657,-0.574880741157772,0.221178663254283,0,0,0,-0.391284346885231,-1.01837891339289,0,0.154341861042433,-0.121779851751874,-0.00236403662455509,0,0,-0.391044581551635,0,-0.00773882289919736,-0.143490688123597,0,-0.282624268704109,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,0.169062045675013,0,0,0,0,0.0848211919592714,0,-0.0138323107379372,-0.373286155956567,-0.33123572077984,0.138887780568881,-0.202606942757706,0,0.484415813286364,-0.058365684698363,-0.162208687586572,-0.193176624135432,-0.147401849371139,-0.189981719549847,0,-0.299125004624137,-0.353797065409617,-0.210458230337316,-0.0161819011100324,-0.129153133140234,-1.2314085082871,0.0683310558406938,0,0,-0.0775089264793031,0.0216617530588477,0,-0.0245818944270024,-0.33577285343434,0.061072945921621,-0.593816505954494,-0.605752726031034,-0.303202896130238,-0.508491535172285,-0.0395325284566706,-0.189453130749931,0,-0.4215723249037,0,0,0,-0.0389318844443185,-0.427940943235114,0.716269779863815,-0.062707931346577,0.302828078485296,-0.0683442610773682,0,-0.514185152729842,-0.0863113171374548,0,0,-0.027280715204634,0,0,0,0,0,-0.0249067460150163,0.494526153327682,0.411961199741001,0,-0.0247338725301126,0,0.251545844559856,0,0.0727415623382356,-0.0478289005683723,0,0.0360736789513998,0,-0.287155656302055,-0.200611226594132,-0.164990696339003,-0.154411483245074,-0.0584468268118252,0.395827586463643,0.107694383964857,-0.129136418410966,-0.634598003747793,-0.248622920090252,-0.0881268324752877,-0.10315205901752,-0.096739210222103,-0.0346813703249789,-0.0498232285771353,-0.190127134081433,0,0.067610665487067,0,0.219396536315007,0,0.477267972424237,-0.0443831091192584,1.17917054297138,-0.103006942322601,0,-0.348539035738074,0.365032358982563,0,-0.363226889141871,0,0,-0.150367083334639,-0.697695966512583,0.491592033380592,0.161339736939694,0,-0.790080158389657,0,0,-0.258230544634559,0.0325072843822746,0,-0.432035078618461,-0.454861053170963,-0.449874180152861,0.0383707876074991,0,0,-0.645700337992725,0,0,-0.60592806381803,-0.0636048451378017,-0.619783323958633,0.104644822385452,-0.000404786703459892,-0.108622809454255,0,0,-0.177527765965176,0.357971163872208,-0.109544077349536,0,0,-0.00185597542183251,0,0,0.178985581936104,0,-0.184606053344413,0,0,0,0.293408712373414,0,0,0,0.0793139969616323,0.141217312137534,0,-0.106279471732802,0,0,0,0,0,0,0,0,-1.32434751667301,-0.0968332978427447,0.0313244453660129,0,0,0,0,-0.0613815415110415,0.0647467600519396,0,0.136120615649032,0,0,0,0,0.0682008712532218,0,0,0.133991661073331,0.211162591594548,-0.057730457053664,-0.52308379245695,0,0,0,-0.122612540559357,0,0,0,0,0.322139528806693,0,0,-0.53785637211927,0,-0.128070138085508,-0.0815818795468414,0,0.184814156120175,0.0362470632477372,-1.30962034064846,0,0,-0.261347131789888,0,0,0.061719528191637,-0.0823702229656663,0,0,0,0,0,0,0,0,-0.0599726513573225,0,0,0,0,0,0,0,0,0,0,0,0.191270138385075,-0.0922240566585104,0,0,0,0,0,0,0,0.0530649074423135,-0.108797149712031,0,0,0.0455079565820118,0,0,0,0,0,-0.113454775791034,0,0,0.154341861042433,0,0,-0.0969923612426051,0,0,0,0,-0.410465260111451,0,0,-0.123020271151081,0,0,0,0,0,0,0,0,0,1.38099646001754,0,0,0,-0.123319086035448,-0.742808256090709,0,0.267983322146663,0,0,0,0.154341861042433,0,-0.27483329820609,0,0,0,0,1.34456407357411,0,0,0,-0.104796384789156,0,0.197653133785822,0,0.154341861042433,0,0,0,0,0.300329193618888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.321837700086195,-0.0247755787802223,0,0,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0.198055177909273,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0.154341861042433,0,0,0,0.144127538131016,0,0,0,0,0,0,0,-0.0979578962680575,0,0,1.16174181750386,0,0,0,0,0,0,-0.210805910135493,-0.283220399823148,-0.121917143318157,0,0,0,-0.054385572482455,0.267983322146663,0,-0.0390109377342095,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00101885069400554,0,0,0,0,0,0.267983322146663,0,0,0,0,0,0,0,0,0,0,0,0,0.133991661073331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099980297797915,0.432475563704395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0.0771709305212165,0,0,0,0,-0.0800184682686384,0,0,0,-0.0587443686146105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0474577030781865,0,0,0,0,0,0,0,0,0.267983322146663,0,0,0,0,-0.0482220752390542,0,0.183606689916636,0,0,0,0,0,0,0,0,0,0,0,0.154341861042433,0,0,0,0.432475563704395,0.000992473151065543,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.0447934160422615,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0.154341861042433,0,-0.253610608288505,0,0,-0.0500451565762915,0,0,0,0,0,0,0,0.136847812024637,0,0,0,0,0.0930216818923068,0,0.496050642353982,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0.154341861042433,0,0,0,0,0,0,0,0,0,0,0,0.154341861042433,0.154341861042433,0,0,0,0,1.29614130374078,0,0,0,0,0,0,0,-0.131298550972814,0.0754860083355829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357971163872208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103619041760783,0,0,0.684896684601268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0,0,0,0,0,0.226459590084645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0,0.551496515666778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721588237889094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.620396418749604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267983322146663,0,0,0,0,0,0,0,0,0.357971163872208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154341861042433,0,0,0,0,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0,0,0,0.154341861042433,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0,0,0.154341861042433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.157236414286507,0,0,0.133991661073331,0,0,0,0,-0.122695996997001,0,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771709305212165,0,0,0,0,0,-0.0237397835175619,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0.432475563704395,0,0,0,0.154341861042433,0.102275075024948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08625470347607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154341861042433,0,0,0,0,0,0.363094052575119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0840536785517455,0.0771709305212165,0,0,0,0,0,0,0,0,0,0.0359208389934093,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307388713271584,0,0,0.390188095227279,0,-0.133937006819345,-0.10683065287731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458831939439216,0.357971163872208,0.0771709305212165,-0.0033468413505625,0,0,0,0,0,0,0.357971163872208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441516142566128,0,-0.0115929524613713,0.669931244174007,0,0,0.373053977492991,0,0,0,0,0,-0.174992895090299,0.929753229942817,0.154341861042433,0,0,0.154341861042433,0,0,0,0.0771709305212165,0,0,0,0,0,0,0,0,0.154341861042433,0,-0.0568589461625992,0.98746350331223,0,-0.110852932203761,0,0,-0.190801340773206,0,0,0,0.172023914773076
|rna_box=128
|rna_box=128
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 79:
|rna_weight_ug=1.25145
|rna_weight_ug=1.25145
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_line=
Line 69: Line 92:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.43435518418357e-222!GO:0043227;membrane-bound organelle;1.92553863383145e-204!GO:0043231;intracellular membrane-bound organelle;3.93350050496072e-204!GO:0043226;organelle;2.23557816428664e-188!GO:0043229;intracellular organelle;9.34306172941444e-188!GO:0005737;cytoplasm;5.04830311822748e-134!GO:0044422;organelle part;5.3781693339317e-114!GO:0044446;intracellular organelle part;2.9893252577881e-112!GO:0005634;nucleus;6.4248404623236e-104!GO:0044444;cytoplasmic part;2.42966118967863e-98!GO:0032991;macromolecular complex;1.03387154110427e-96!GO:0043170;macromolecule metabolic process;2.70193257924246e-94!GO:0044237;cellular metabolic process;6.01367761694219e-94!GO:0044238;primary metabolic process;1.32825578987256e-89!GO:0030529;ribonucleoprotein complex;1.1194018377583e-84!GO:0003723;RNA binding;1.24303720252481e-79!GO:0044428;nuclear part;7.3322105782769e-79!GO:0043233;organelle lumen;1.21380655514672e-68!GO:0031974;membrane-enclosed lumen;1.21380655514672e-68!GO:0043283;biopolymer metabolic process;1.60155295323913e-68!GO:0010467;gene expression;1.33150200663687e-66!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.06085150916442e-59!GO:0005739;mitochondrion;1.6139784673399e-57!GO:0006412;translation;2.06371563984536e-55!GO:0006396;RNA processing;1.82116687274918e-52!GO:0005515;protein binding;1.73383999787626e-49!GO:0005840;ribosome;1.39959220289542e-48!GO:0043234;protein complex;1.9672389185628e-48!GO:0031981;nuclear lumen;1.65650270258731e-47!GO:0033036;macromolecule localization;1.17200673653021e-46!GO:0015031;protein transport;9.06061219385619e-45!GO:0003676;nucleic acid binding;4.14454224157505e-44!GO:0045184;establishment of protein localization;7.29097132059957e-44!GO:0016071;mRNA metabolic process;1.0517114944377e-43!GO:0019538;protein metabolic process;4.05039264551283e-43!GO:0008104;protein localization;5.65473458876469e-43!GO:0003735;structural constituent of ribosome;9.66374963726826e-42!GO:0044267;cellular protein metabolic process;9.69181067424429e-42!GO:0044260;cellular macromolecule metabolic process;3.76038787237684e-41!GO:0044429;mitochondrial part;1.10549276391983e-39!GO:0009059;macromolecule biosynthetic process;1.1143504302015e-39!GO:0031967;organelle envelope;8.2728905172879e-39!GO:0031090;organelle membrane;9.85984027879274e-39!GO:0033279;ribosomal subunit;1.71031165527955e-38!GO:0031975;envelope;1.82587499863515e-38!GO:0008380;RNA splicing;2.22976683101998e-38!GO:0006397;mRNA processing;8.10441367304543e-37!GO:0016070;RNA metabolic process;3.37886055118983e-36!GO:0005829;cytosol;8.69969799444197e-34!GO:0044249;cellular biosynthetic process;6.27832784229453e-32!GO:0005654;nucleoplasm;7.78067021437334e-32!GO:0009058;biosynthetic process;2.6474050193931e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.58238797895385e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.09410362383563e-30!GO:0046907;intracellular transport;2.03271165631718e-29!GO:0006259;DNA metabolic process;8.23436107533267e-29!GO:0005681;spliceosome;1.13460570824185e-28!GO:0065003;macromolecular complex assembly;2.63044420742523e-28!GO:0006886;intracellular protein transport;8.51873199933206e-28!GO:0016043;cellular component organization and biogenesis;2.18384064209341e-27!GO:0044445;cytosolic part;3.42012628120607e-27!GO:0044451;nucleoplasm part;2.92339791934003e-25!GO:0005740;mitochondrial envelope;9.88601991449792e-25!GO:0022607;cellular component assembly;1.91360973664291e-24!GO:0019866;organelle inner membrane;5.60064080326866e-24!GO:0031966;mitochondrial membrane;1.5524092828335e-23!GO:0006512;ubiquitin cycle;3.25165784271822e-23!GO:0006996;organelle organization and biogenesis;5.87367676476048e-22!GO:0000166;nucleotide binding;6.37124114713903e-22!GO:0005743;mitochondrial inner membrane;1.32505277730853e-21!GO:0051649;establishment of cellular localization;2.27045998753706e-21!GO:0051641;cellular localization;4.97467846850221e-21!GO:0044265;cellular macromolecule catabolic process;6.44991634400227e-21!GO:0015935;small ribosomal subunit;9.07042193334686e-21!GO:0008134;transcription factor binding;1.67134703222596e-20!GO:0022618;protein-RNA complex assembly;1.97698886747982e-20!GO:0006119;oxidative phosphorylation;2.03384380058171e-20!GO:0019941;modification-dependent protein catabolic process;1.28817347869719e-19!GO:0043632;modification-dependent macromolecule catabolic process;1.28817347869719e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;1.36125443352966e-19!GO:0016874;ligase activity;1.41713449533837e-19!GO:0006511;ubiquitin-dependent protein catabolic process;1.92807949878238e-19!GO:0044257;cellular protein catabolic process;2.82222896514059e-19!GO:0043285;biopolymer catabolic process;6.91991333269176e-19!GO:0015934;large ribosomal subunit;8.91982236737001e-19!GO:0006915;apoptosis;4.07557567049976e-18!GO:0012501;programmed cell death;4.6245375943795e-18!GO:0044455;mitochondrial membrane part;8.46491071942959e-18!GO:0031980;mitochondrial lumen;2.21886534655775e-17!GO:0005759;mitochondrial matrix;2.21886534655775e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.27980012685614e-17!GO:0016462;pyrophosphatase activity;3.03734108872826e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;3.11727200401885e-17!GO:0043412;biopolymer modification;3.36822219195399e-17!GO:0006974;response to DNA damage stimulus;3.38028758586933e-17!GO:0017111;nucleoside-triphosphatase activity;3.46683554718424e-17!GO:0043228;non-membrane-bound organelle;3.85704513828101e-17!GO:0043232;intracellular non-membrane-bound organelle;3.85704513828101e-17!GO:0016604;nuclear body;7.37330609687433e-17!GO:0005730;nucleolus;1.23084477672231e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.70926067014254e-16!GO:0050794;regulation of cellular process;2.07537883254907e-16!GO:0009057;macromolecule catabolic process;2.86299338111749e-16!GO:0006605;protein targeting;3.16340722005542e-16!GO:0032553;ribonucleotide binding;3.52122226362881e-16!GO:0032555;purine ribonucleotide binding;3.52122226362881e-16!GO:0008219;cell death;5.38407089809528e-16!GO:0016265;death;5.38407089809528e-16!GO:0017076;purine nucleotide binding;1.02493223334222e-15!GO:0006457;protein folding;5.70564498994727e-15!GO:0008135;translation factor activity, nucleic acid binding;6.17762121600139e-15!GO:0005746;mitochondrial respiratory chain;7.93376241388943e-15!GO:0005635;nuclear envelope;9.38975182546208e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.13733055017398e-14!GO:0006464;protein modification process;1.22818878257462e-14!GO:0012505;endomembrane system;2.04416641614182e-14!GO:0005524;ATP binding;2.08863082911813e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.14195419446083e-14!GO:0006281;DNA repair;2.20776410953076e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;3.48094776736139e-14!GO:0000375;RNA splicing, via transesterification reactions;3.48094776736139e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.48094776736139e-14!GO:0030163;protein catabolic process;3.48636353642576e-14!GO:0051276;chromosome organization and biogenesis;5.10637785003917e-14!GO:0019222;regulation of metabolic process;5.36063796386497e-14!GO:0032559;adenyl ribonucleotide binding;5.71972038087207e-14!GO:0044248;cellular catabolic process;6.90578783260095e-14!GO:0043687;post-translational protein modification;7.61124158149722e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;7.90663368018818e-14!GO:0003712;transcription cofactor activity;1.34033038250451e-13!GO:0031965;nuclear membrane;1.4727376588546e-13!GO:0030554;adenyl nucleotide binding;2.3929374658808e-13!GO:0016607;nuclear speck;3.1023982031662e-13!GO:0006323;DNA packaging;3.23445731510209e-13!GO:0006913;nucleocytoplasmic transport;5.55299107017628e-13!GO:0050136;NADH dehydrogenase (quinone) activity;5.80064294193388e-13!GO:0003954;NADH dehydrogenase activity;5.80064294193388e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.80064294193388e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.34498644406194e-13!GO:0006413;translational initiation;6.85936040307239e-13!GO:0016887;ATPase activity;6.85936040307239e-13!GO:0007049;cell cycle;7.52832501128599e-13!GO:0051169;nuclear transport;1.0302822341952e-12!GO:0005761;mitochondrial ribosome;1.36318689397953e-12!GO:0000313;organellar ribosome;1.36318689397953e-12!GO:0042623;ATPase activity, coupled;1.54388721949911e-12!GO:0031323;regulation of cellular metabolic process;2.33017448003954e-12!GO:0008639;small protein conjugating enzyme activity;2.65588066627681e-12!GO:0004842;ubiquitin-protein ligase activity;5.01838230242323e-12!GO:0042981;regulation of apoptosis;5.83257827194234e-12!GO:0048770;pigment granule;9.21379635198102e-12!GO:0042470;melanosome;9.21379635198102e-12!GO:0003743;translation initiation factor activity;9.4453541883109e-12!GO:0043067;regulation of programmed cell death;9.64092335825936e-12!GO:0005694;chromosome;1.09080236111562e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.21096241305999e-11!GO:0042773;ATP synthesis coupled electron transport;1.21096241305999e-11!GO:0042254;ribosome biogenesis and assembly;1.37204791664756e-11!GO:0006446;regulation of translational initiation;1.80873907051374e-11!GO:0044453;nuclear membrane part;1.8863659763868e-11!GO:0019787;small conjugating protein ligase activity;2.28063732588787e-11!GO:0030964;NADH dehydrogenase complex (quinone);3.67440045267851e-11!GO:0045271;respiratory chain complex I;3.67440045267851e-11!GO:0005747;mitochondrial respiratory chain complex I;3.67440045267851e-11!GO:0051082;unfolded protein binding;9.52288619947881e-11!GO:0009719;response to endogenous stimulus;9.54935135883088e-11!GO:0004386;helicase activity;9.62260770218878e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.04082979133145e-10!GO:0050789;regulation of biological process;1.19946109329771e-10!GO:0006350;transcription;1.38443650503691e-10!GO:0017038;protein import;2.06018944739444e-10!GO:0006403;RNA localization;3.36194215461169e-10!GO:0050657;nucleic acid transport;3.44721899377307e-10!GO:0051236;establishment of RNA localization;3.44721899377307e-10!GO:0050658;RNA transport;3.44721899377307e-10!GO:0005643;nuclear pore;3.60180015610853e-10!GO:0010468;regulation of gene expression;3.71634316833998e-10!GO:0016568;chromatin modification;4.71962620541906e-10!GO:0008026;ATP-dependent helicase activity;6.30613217628947e-10!GO:0048193;Golgi vesicle transport;7.13678254296268e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.71010338330074e-10!GO:0022402;cell cycle process;7.87516133303715e-10!GO:0044427;chromosomal part;9.04915433151549e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.37688183073287e-09!GO:0005794;Golgi apparatus;1.6000374381806e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.89716435348029e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.03560525897183e-09!GO:0019829;cation-transporting ATPase activity;2.17227776413639e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.72117260678197e-09!GO:0051186;cofactor metabolic process;2.89708875087044e-09!GO:0065002;intracellular protein transport across a membrane;3.27396357481891e-09!GO:0065004;protein-DNA complex assembly;4.01502446639314e-09!GO:0003713;transcription coactivator activity;4.28925294900609e-09!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.60768692373746e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.67892347679956e-09!GO:0016881;acid-amino acid ligase activity;5.12427933205064e-09!GO:0009259;ribonucleotide metabolic process;5.13222533238732e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.40897876811603e-09!GO:0006333;chromatin assembly or disassembly;5.64280539077421e-09!GO:0015078;hydrogen ion transmembrane transporter activity;6.2703270275725e-09!GO:0051726;regulation of cell cycle;6.2703270275725e-09!GO:0051246;regulation of protein metabolic process;6.39529163367524e-09!GO:0000074;regulation of progression through cell cycle;8.13165278118732e-09!GO:0006366;transcription from RNA polymerase II promoter;1.00275543283282e-08!GO:0005783;endoplasmic reticulum;1.02026328238921e-08!GO:0006399;tRNA metabolic process;1.06071329464854e-08!GO:0016192;vesicle-mediated transport;1.12865433656113e-08!GO:0009260;ribonucleotide biosynthetic process;1.1812170119608e-08!GO:0043566;structure-specific DNA binding;1.2673514843985e-08!GO:0006793;phosphorus metabolic process;1.28445027082569e-08!GO:0006796;phosphate metabolic process;1.28445027082569e-08!GO:0051028;mRNA transport;1.4296341956399e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.51536567430304e-08!GO:0006164;purine nucleotide biosynthetic process;1.61821427437594e-08!GO:0016072;rRNA metabolic process;1.78388686923285e-08!GO:0007243;protein kinase cascade;2.20654088635234e-08!GO:0006163;purine nucleotide metabolic process;2.33689253714528e-08!GO:0046930;pore complex;2.66326128009215e-08!GO:0006364;rRNA processing;2.76857444920666e-08!GO:0015986;ATP synthesis coupled proton transport;2.86931554292213e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.86931554292213e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.00176197993905e-08!GO:0005768;endosome;3.27921877683877e-08!GO:0065009;regulation of a molecular function;3.75304728585403e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.62242634284296e-08!GO:0009150;purine ribonucleotide metabolic process;4.6292509478041e-08!GO:0044432;endoplasmic reticulum part;6.49557501806101e-08!GO:0032774;RNA biosynthetic process;7.00198308320466e-08!GO:0016310;phosphorylation;7.31596128476141e-08!GO:0004298;threonine endopeptidase activity;7.84546963137288e-08!GO:0030532;small nuclear ribonucleoprotein complex;8.41203459723291e-08!GO:0006351;transcription, DNA-dependent;8.67905384625649e-08!GO:0008270;zinc ion binding;1.04031773580784e-07!GO:0008565;protein transporter activity;1.18819761028224e-07!GO:0006732;coenzyme metabolic process;1.26715405555104e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.31997097605294e-07!GO:0032446;protein modification by small protein conjugation;1.32701276643112e-07!GO:0045449;regulation of transcription;1.44942351315384e-07!GO:0016563;transcription activator activity;1.47704203111275e-07!GO:0051170;nuclear import;2.21385233935989e-07!GO:0031324;negative regulation of cellular metabolic process;2.21385233935989e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.4717552243148e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.4717552243148e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.7338193787218e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.74045206127603e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.74045206127603e-07!GO:0000785;chromatin;2.82175707323114e-07!GO:0006754;ATP biosynthetic process;3.21899208548539e-07!GO:0006753;nucleoside phosphate metabolic process;3.21899208548539e-07!GO:0016567;protein ubiquitination;3.27756451931143e-07!GO:0009056;catabolic process;4.09098756814579e-07!GO:0006606;protein import into nucleus;4.34432669945147e-07!GO:0016787;hydrolase activity;4.86125604208761e-07!GO:0000245;spliceosome assembly;4.9130860365465e-07!GO:0016779;nucleotidyltransferase activity;5.23299835475762e-07!GO:0065007;biological regulation;5.39755565843763e-07!GO:0016564;transcription repressor activity;5.43953490311507e-07!GO:0003697;single-stranded DNA binding;5.9900201694417e-07!GO:0048523;negative regulation of cellular process;6.00403052256208e-07!GO:0043069;negative regulation of programmed cell death;6.63928966998577e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.57354874337435e-07!GO:0009060;aerobic respiration;8.03714791934023e-07!GO:0009199;ribonucleoside triphosphate metabolic process;9.31620645053004e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;9.48972907157123e-07!GO:0004812;aminoacyl-tRNA ligase activity;9.48972907157123e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;9.48972907157123e-07!GO:0043066;negative regulation of apoptosis;9.5969865169918e-07!GO:0006260;DNA replication;1.0049641685095e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.05048618309008e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.05048618309008e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.05645455692394e-06!GO:0009141;nucleoside triphosphate metabolic process;1.15102467331794e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.21926040714516e-06!GO:0005789;endoplasmic reticulum membrane;1.26650291577921e-06!GO:0000151;ubiquitin ligase complex;1.28776377942181e-06!GO:0006417;regulation of translation;1.38191663942253e-06!GO:0006401;RNA catabolic process;1.38191663942253e-06!GO:0005770;late endosome;1.70385849740742e-06!GO:0043038;amino acid activation;2.01995474298582e-06!GO:0006418;tRNA aminoacylation for protein translation;2.01995474298582e-06!GO:0043039;tRNA aminoacylation;2.01995474298582e-06!GO:0046034;ATP metabolic process;2.08937673972046e-06!GO:0019899;enzyme binding;2.56802516515173e-06!GO:0007242;intracellular signaling cascade;2.99907430598192e-06!GO:0009055;electron carrier activity;3.25010649141566e-06!GO:0005773;vacuole;3.25010649141566e-06!GO:0045259;proton-transporting ATP synthase complex;3.80401828878376e-06!GO:0009615;response to virus;3.91068506484487e-06!GO:0016481;negative regulation of transcription;3.99433562675077e-06!GO:0006355;regulation of transcription, DNA-dependent;3.99814542845833e-06!GO:0005793;ER-Golgi intermediate compartment;4.17394041105299e-06!GO:0007005;mitochondrion organization and biogenesis;4.18600087761797e-06!GO:0000278;mitotic cell cycle;4.20867963244253e-06!GO:0045333;cellular respiration;4.20867963244253e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.22561102328147e-06!GO:0045786;negative regulation of progression through cell cycle;5.03940716175309e-06!GO:0006916;anti-apoptosis;6.03872813097614e-06!GO:0046914;transition metal ion binding;6.97306774819778e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.64189175042403e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.84243956867518e-06!GO:0006613;cotranslational protein targeting to membrane;7.93043010054231e-06!GO:0006461;protein complex assembly;8.18449828545168e-06!GO:0003677;DNA binding;8.4061465887436e-06!GO:0000323;lytic vacuole;8.77131233699735e-06!GO:0005764;lysosome;8.77131233699735e-06!GO:0051188;cofactor biosynthetic process;9.22365420029274e-06!GO:0043065;positive regulation of apoptosis;1.08635048092338e-05!GO:0006334;nucleosome assembly;1.09521240541349e-05!GO:0009892;negative regulation of metabolic process;1.13214674634426e-05!GO:0006099;tricarboxylic acid cycle;1.21070727450411e-05!GO:0046356;acetyl-CoA catabolic process;1.21070727450411e-05!GO:0016740;transferase activity;1.36129654289985e-05!GO:0031497;chromatin assembly;1.39439566771782e-05!GO:0003724;RNA helicase activity;1.5620470047079e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.66932485237225e-05!GO:0043068;positive regulation of programmed cell death;1.72629400006954e-05!GO:0048519;negative regulation of biological process;1.81534962786828e-05!GO:0031326;regulation of cellular biosynthetic process;2.27133883216347e-05!GO:0044440;endosomal part;2.27133883216347e-05!GO:0010008;endosome membrane;2.27133883216347e-05!GO:0051168;nuclear export;2.50632936054636e-05!GO:0006084;acetyl-CoA metabolic process;2.65314961207388e-05!GO:0050790;regulation of catalytic activity;2.67266278093785e-05!GO:0006402;mRNA catabolic process;3.43612571992989e-05!GO:0003714;transcription corepressor activity;4.1189450698934e-05!GO:0006917;induction of apoptosis;4.46577777359574e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.56361147328019e-05!GO:0015399;primary active transmembrane transporter activity;4.56361147328019e-05!GO:0003690;double-stranded DNA binding;4.84886826667934e-05!GO:0007264;small GTPase mediated signal transduction;4.94161922032422e-05!GO:0009108;coenzyme biosynthetic process;6.20392907367586e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.36639569498852e-05!GO:0030120;vesicle coat;6.50058505978849e-05!GO:0030662;coated vesicle membrane;6.50058505978849e-05!GO:0012502;induction of programmed cell death;6.58705481380769e-05!GO:0006752;group transfer coenzyme metabolic process;6.6958475996151e-05!GO:0016197;endosome transport;6.80859265988014e-05!GO:0005667;transcription factor complex;7.27198037202439e-05!GO:0044431;Golgi apparatus part;8.04384655769522e-05!GO:0006612;protein targeting to membrane;8.3679838716676e-05!GO:0009109;coenzyme catabolic process;8.47911967948066e-05!GO:0000087;M phase of mitotic cell cycle;9.64041524338893e-05!GO:0009117;nucleotide metabolic process;0.000101218362816975!GO:0007067;mitosis;0.000118200973540854!GO:0008632;apoptotic program;0.00012056676876341!GO:0022403;cell cycle phase;0.000139442328527996!GO:0009967;positive regulation of signal transduction;0.00014875171857308!GO:0005762;mitochondrial large ribosomal subunit;0.000185937181172566!GO:0000315;organellar large ribosomal subunit;0.000185937181172566!GO:0031072;heat shock protein binding;0.000189956048236516!GO:0005813;centrosome;0.000197786332437891!GO:0005885;Arp2/3 protein complex;0.000204188547202087!GO:0051187;cofactor catabolic process;0.00020717789073485!GO:0003899;DNA-directed RNA polymerase activity;0.000207321273403717!GO:0009889;regulation of biosynthetic process;0.000216662283247391!GO:0005525;GTP binding;0.000218014754218402!GO:0008234;cysteine-type peptidase activity;0.000237734422127786!GO:0043681;protein import into mitochondrion;0.000255773764401824!GO:0000314;organellar small ribosomal subunit;0.000263705791580865!GO:0005763;mitochondrial small ribosomal subunit;0.000263705791580865!GO:0042113;B cell activation;0.000263705791580865!GO:0043623;cellular protein complex assembly;0.000263705791580865!GO:0048475;coated membrane;0.000274695033912937!GO:0030117;membrane coat;0.000274695033912937!GO:0006352;transcription initiation;0.000274695033912937!GO:0006950;response to stress;0.000289276799151016!GO:0006261;DNA-dependent DNA replication;0.000294790793026841!GO:0008654;phospholipid biosynthetic process;0.000314457425089023!GO:0008186;RNA-dependent ATPase activity;0.000344269969598449!GO:0051427;hormone receptor binding;0.000349149943209675!GO:0006818;hydrogen transport;0.000398553012775125!GO:0003924;GTPase activity;0.000416942879604706!GO:0015992;proton transport;0.000420908522096322!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000435413552426408!GO:0045892;negative regulation of transcription, DNA-dependent;0.000462486368499039!GO:0043492;ATPase activity, coupled to movement of substances;0.000481751285820131!GO:0043021;ribonucleoprotein binding;0.000486346035855135!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000513078588762392!GO:0004674;protein serine/threonine kinase activity;0.000534587829780594!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000539514056268358!GO:0051789;response to protein stimulus;0.000539514056268358!GO:0006986;response to unfolded protein;0.000539514056268358!GO:0016251;general RNA polymerase II transcription factor activity;0.000552298925750229!GO:0022890;inorganic cation transmembrane transporter activity;0.000559598276483433!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00056395916445732!GO:0005774;vacuolar membrane;0.000566242302919921!GO:0045454;cell redox homeostasis;0.000572709975757475!GO:0031902;late endosome membrane;0.00061051721994426!GO:0035257;nuclear hormone receptor binding;0.000640126813814607!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000651721271142486!GO:0016363;nuclear matrix;0.000656602991627863!GO:0048522;positive regulation of cellular process;0.000664921021762496!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000676426407084214!GO:0051301;cell division;0.000729598003246112!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000736080098348505!GO:0030384;phosphoinositide metabolic process;0.00074315829163096!GO:0007265;Ras protein signal transduction;0.000753022063671699!GO:0006310;DNA recombination;0.000794084639844018!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000794084639844018!GO:0005815;microtubule organizing center;0.000817348511713848!GO:0003729;mRNA binding;0.000959227559442906!GO:0004004;ATP-dependent RNA helicase activity;0.000996265474449691!GO:0046649;lymphocyte activation;0.00104565542699445!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00108028421206191!GO:0008047;enzyme activator activity;0.00108523390231569!GO:0060090;molecular adaptor activity;0.00108799422894458!GO:0000786;nucleosome;0.00124078501488775!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00127063061629927!GO:0000279;M phase;0.00130803329982659!GO:0051252;regulation of RNA metabolic process;0.00133076495456597!GO:0006383;transcription from RNA polymerase III promoter;0.00136089880766226!GO:0051336;regulation of hydrolase activity;0.00144457411644338!GO:0044437;vacuolar part;0.00149886555556076!GO:0006891;intra-Golgi vesicle-mediated transport;0.00151411949499694!GO:0043087;regulation of GTPase activity;0.00154922730465271!GO:0004518;nuclease activity;0.00157904375906261!GO:0008033;tRNA processing;0.00158665385646194!GO:0006650;glycerophospholipid metabolic process;0.00159115141219829!GO:0005765;lysosomal membrane;0.00166988372546396!GO:0005769;early endosome;0.0017261982337986!GO:0005637;nuclear inner membrane;0.00174803894395593!GO:0007034;vacuolar transport;0.00180371916177756!GO:0032561;guanyl ribonucleotide binding;0.00183017257791134!GO:0019001;guanyl nucleotide binding;0.00183017257791134!GO:0006414;translational elongation;0.00195010511732705!GO:0007006;mitochondrial membrane organization and biogenesis;0.001986440592753!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00201604732404851!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00201604732404851!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00201604732404851!GO:0005798;Golgi-associated vesicle;0.00205792189520822!GO:0045321;leukocyte activation;0.00215979674139158!GO:0005741;mitochondrial outer membrane;0.00216304581734355!GO:0042613;MHC class II protein complex;0.00226396675029734!GO:0044452;nucleolar part;0.00228666772266716!GO:0003725;double-stranded RNA binding;0.00233023286360694!GO:0043488;regulation of mRNA stability;0.00237860852570708!GO:0043487;regulation of RNA stability;0.00237860852570708!GO:0006611;protein export from nucleus;0.0024123465126366!GO:0048500;signal recognition particle;0.00251916851707807!GO:0000139;Golgi membrane;0.00255479765444991!GO:0008168;methyltransferase activity;0.00264533156936605!GO:0019843;rRNA binding;0.00271092347576537!GO:0003711;transcription elongation regulator activity;0.00272368951586013!GO:0016741;transferase activity, transferring one-carbon groups;0.00280712942019828!GO:0002376;immune system process;0.00283547638886789!GO:0002764;immune response-regulating signal transduction;0.00302084411481035!GO:0046489;phosphoinositide biosynthetic process;0.00302084411481035!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00302084411481035!GO:0015002;heme-copper terminal oxidase activity;0.00302084411481035!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00302084411481035!GO:0004129;cytochrome-c oxidase activity;0.00302084411481035!GO:0006302;double-strand break repair;0.00315991833839913!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00333848115552608!GO:0004527;exonuclease activity;0.00347153625398829!GO:0030518;steroid hormone receptor signaling pathway;0.00348300559479945!GO:0006626;protein targeting to mitochondrion;0.00361677359763688!GO:0033116;ER-Golgi intermediate compartment membrane;0.00367331125697191!GO:0009165;nucleotide biosynthetic process;0.00376784840513941!GO:0008312;7S RNA binding;0.00376811772688359!GO:0051920;peroxiredoxin activity;0.00383463654258017!GO:0005669;transcription factor TFIID complex;0.00391700855169273!GO:0031968;organelle outer membrane;0.00397940285203571!GO:0030695;GTPase regulator activity;0.00405068316701519!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00432699376285813!GO:0045047;protein targeting to ER;0.00432699376285813!GO:0048471;perinuclear region of cytoplasm;0.00446474466907479!GO:0046474;glycerophospholipid biosynthetic process;0.00460524015561961!GO:0006839;mitochondrial transport;0.00461419554135106!GO:0019867;outer membrane;0.00466382471626727!GO:0019783;small conjugating protein-specific protease activity;0.00481849951756314!GO:0006405;RNA export from nucleus;0.00514373372211724!GO:0003684;damaged DNA binding;0.00540696700784121!GO:0016584;nucleosome positioning;0.00557042988315896!GO:0007050;cell cycle arrest;0.00560107112188383!GO:0030433;ER-associated protein catabolic process;0.00577419582549006!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00577419582549006!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00586518392590575!GO:0031625;ubiquitin protein ligase binding;0.00592685349383602!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00593675900186332!GO:0046966;thyroid hormone receptor binding;0.00614946962233517!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00623470626469933!GO:0004843;ubiquitin-specific protease activity;0.00654353136300749!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00667196483495393!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00667196483495393!GO:0048518;positive regulation of biological process;0.00680613938415678!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00691188795727301!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0069709463961994!GO:0031252;leading edge;0.00700880789240786!GO:0030258;lipid modification;0.00708454867744038!GO:0002757;immune response-activating signal transduction;0.00708752932248239!GO:0030521;androgen receptor signaling pathway;0.00718429632072026!GO:0005684;U2-dependent spliceosome;0.00744272766047202!GO:0032200;telomere organization and biogenesis;0.00744620495348844!GO:0000723;telomere maintenance;0.00744620495348844!GO:0005657;replication fork;0.00744620495348844!GO:0043281;regulation of caspase activity;0.00782809311881341!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00797945151958103!GO:0007041;lysosomal transport;0.00802061828064669!GO:0004532;exoribonuclease activity;0.00827196611629447!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00827196611629447!GO:0032940;secretion by cell;0.00865534294880888!GO:0006919;caspase activation;0.00866004692107839!GO:0016272;prefoldin complex;0.00884059736615037!GO:0009966;regulation of signal transduction;0.009034328323!GO:0046467;membrane lipid biosynthetic process;0.00921564203944458!GO:0008408;3'-5' exonuclease activity;0.00946789484598197!GO:0005048;signal sequence binding;0.00992889152358091!GO:0016859;cis-trans isomerase activity;0.00997211143190098!GO:0009607;response to biotic stimulus;0.0100544863004582!GO:0005070;SH3/SH2 adaptor activity;0.0101334391754539!GO:0051052;regulation of DNA metabolic process;0.010144574392527!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0103207763052799!GO:0004221;ubiquitin thiolesterase activity;0.0104241472982831!GO:0046822;regulation of nucleocytoplasmic transport;0.0104871943045506!GO:0051087;chaperone binding;0.0105239869885547!GO:0016605;PML body;0.0106584486174184!GO:0045947;negative regulation of translational initiation;0.0107157091698998!GO:0000118;histone deacetylase complex;0.0107482136994791!GO:0004722;protein serine/threonine phosphatase activity;0.0108876771516798!GO:0047485;protein N-terminus binding;0.0110827436049945!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0110827436049945!GO:0030880;RNA polymerase complex;0.0111565773586899!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0112482272933554!GO:0003678;DNA helicase activity;0.0120357191707851!GO:0000119;mediator complex;0.012383696685729!GO:0050871;positive regulation of B cell activation;0.0124699189297495!GO:0000059;protein import into nucleus, docking;0.012559074123464!GO:0016853;isomerase activity;0.0126016046826692!GO:0051090;regulation of transcription factor activity;0.0127301237411979!GO:0030663;COPI coated vesicle membrane;0.0127775146185378!GO:0030126;COPI vesicle coat;0.0127775146185378!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0128082566529213!GO:0042802;identical protein binding;0.0131137493913353!GO:0015923;mannosidase activity;0.0132044066392136!GO:0003746;translation elongation factor activity;0.0136009888658754!GO:0006289;nucleotide-excision repair;0.013855861532274!GO:0000049;tRNA binding;0.0140920803314819!GO:0030137;COPI-coated vesicle;0.0143696873951114!GO:0005083;small GTPase regulator activity;0.0144699869548608!GO:0051098;regulation of binding;0.0149699572226477!GO:0030041;actin filament polymerization;0.0151082314680143!GO:0006672;ceramide metabolic process;0.0157872889944084!GO:0018193;peptidyl-amino acid modification;0.0158156590427981!GO:0051059;NF-kappaB binding;0.0158613330960681!GO:0006607;NLS-bearing substrate import into nucleus;0.015990938263231!GO:0031982;vesicle;0.0159918867994222!GO:0045792;negative regulation of cell size;0.0162083832456819!GO:0004402;histone acetyltransferase activity;0.0165222925951779!GO:0004468;lysine N-acetyltransferase activity;0.0165222925951779!GO:0009116;nucleoside metabolic process;0.0165537538756649!GO:0042824;MHC class I peptide loading complex;0.0166468130433665!GO:0030658;transport vesicle membrane;0.016754682694369!GO:0050851;antigen receptor-mediated signaling pathway;0.0167755392224316!GO:0051539;4 iron, 4 sulfur cluster binding;0.0175305670208976!GO:0043022;ribosome binding;0.017671480041041!GO:0031901;early endosome membrane;0.018009468669089!GO:0030308;negative regulation of cell growth;0.0182049280854096!GO:0032318;regulation of Ras GTPase activity;0.0185651886337763!GO:0030522;intracellular receptor-mediated signaling pathway;0.0186478726012469!GO:0019883;antigen processing and presentation of endogenous antigen;0.0191284686337016!GO:0030833;regulation of actin filament polymerization;0.0192040489772383!GO:0032259;methylation;0.0192620389669832!GO:0006338;chromatin remodeling;0.0193128322853415!GO:0051338;regulation of transferase activity;0.0193387227462872!GO:0006914;autophagy;0.019642504624025!GO:0019210;kinase inhibitor activity;0.0197859549146183!GO:0005096;GTPase activator activity;0.0206308838967391!GO:0000738;DNA catabolic process, exonucleolytic;0.0209483871007441!GO:0006376;mRNA splice site selection;0.0210643389285536!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0210643389285536!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0210643389285536!GO:0000428;DNA-directed RNA polymerase complex;0.0210643389285536!GO:0000781;chromosome, telomeric region;0.0217987481438921!GO:0001775;cell activation;0.0219033065656327!GO:0005832;chaperonin-containing T-complex;0.0220001577393865!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0220001577393865!GO:0000075;cell cycle checkpoint;0.0221528833920497!GO:0006091;generation of precursor metabolites and energy;0.0224705449173422!GO:0051092;activation of NF-kappaB transcription factor;0.022502035084984!GO:0009893;positive regulation of metabolic process;0.022601226648992!GO:0050853;B cell receptor signaling pathway;0.0226906269291451!GO:0015980;energy derivation by oxidation of organic compounds;0.0227122453431565!GO:0051223;regulation of protein transport;0.0227511291765452!GO:0046979;TAP2 binding;0.0227511291765452!GO:0046977;TAP binding;0.0227511291765452!GO:0046978;TAP1 binding;0.0227511291765452!GO:0008097;5S rRNA binding;0.0227680610529775!GO:0045045;secretory pathway;0.0235422523718245!GO:0019882;antigen processing and presentation;0.0236689951053976!GO:0008139;nuclear localization sequence binding;0.0237812605578859!GO:0008287;protein serine/threonine phosphatase complex;0.0237979354403961!GO:0015631;tubulin binding;0.0238212059160208!GO:0043280;positive regulation of caspase activity;0.024148152762491!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.024525241161615!GO:0015630;microtubule cytoskeleton;0.0249493044357525!GO:0043549;regulation of kinase activity;0.0250525297741834!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0253202685406532!GO:0000178;exosome (RNase complex);0.0253433128705002!GO:0051540;metal cluster binding;0.0254028174830935!GO:0051536;iron-sulfur cluster binding;0.0254028174830935!GO:0006595;polyamine metabolic process;0.0254390155566141!GO:0048002;antigen processing and presentation of peptide antigen;0.0254390155566141!GO:0004860;protein kinase inhibitor activity;0.0257862857193415!GO:0043414;biopolymer methylation;0.0261439494768565!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0262282914905983!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0265891906741257!GO:0031124;mRNA 3'-end processing;0.0266848481647538!GO:0045926;negative regulation of growth;0.0268682446624779!GO:0030867;rough endoplasmic reticulum membrane;0.0269625532003969!GO:0045730;respiratory burst;0.0270337437085259!GO:0000209;protein polyubiquitination;0.0274620647156748!GO:0005869;dynactin complex;0.0281774969765281!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0284095514857442!GO:0051251;positive regulation of lymphocyte activation;0.0284095514857442!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0287916971415155!GO:0045941;positive regulation of transcription;0.0289816451392546!GO:0004576;oligosaccharyl transferase activity;0.0290154143972161!GO:0019814;immunoglobulin complex;0.029032955958364!GO:0019815;B cell receptor complex;0.029032955958364!GO:0008017;microtubule binding;0.0291384478968998!GO:0007004;telomere maintenance via telomerase;0.0294321078114598!GO:0046519;sphingoid metabolic process;0.0301377291058173!GO:0031988;membrane-bound vesicle;0.0309032955505621!GO:0008637;apoptotic mitochondrial changes;0.0309241013426461!GO:0006284;base-excision repair;0.0326374894325443!GO:0000287;magnesium ion binding;0.0326849476643592!GO:0000776;kinetochore;0.0327485323346835!GO:0004540;ribonuclease activity;0.0331122309862765!GO:0006516;glycoprotein catabolic process;0.0332714204386138!GO:0030660;Golgi-associated vesicle membrane;0.034027291581257!GO:0035258;steroid hormone receptor binding;0.0346004769612034!GO:0007040;lysosome organization and biogenesis;0.0349890871625977!GO:0031647;regulation of protein stability;0.0349890871625977!GO:0000339;RNA cap binding;0.0352962534816731!GO:0043550;regulation of lipid kinase activity;0.0354674961110926!GO:0031410;cytoplasmic vesicle;0.0356819828404359!GO:0000303;response to superoxide;0.0363774698762864!GO:0004197;cysteine-type endopeptidase activity;0.0367832610674066!GO:0009112;nucleobase metabolic process;0.0367934705879641!GO:0006506;GPI anchor biosynthetic process;0.0367958648301039!GO:0009451;RNA modification;0.0369013600122374!GO:0008624;induction of apoptosis by extracellular signals;0.0377479791077928!GO:0016790;thiolester hydrolase activity;0.0380280773944246!GO:0005784;translocon complex;0.0390939613762258!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0394097949327967!GO:0030503;regulation of cell redox homeostasis;0.0394614387829891!GO:0001667;ameboidal cell migration;0.0398431573822831!GO:0032027;myosin light chain binding;0.0398431573822831!GO:0030968;unfolded protein response;0.0399397335831166!GO:0022415;viral reproductive process;0.0399577976924473!GO:0006984;ER-nuclear signaling pathway;0.0403892887115537!GO:0000175;3'-5'-exoribonuclease activity;0.0406252281585401!GO:0045603;positive regulation of endothelial cell differentiation;0.0406275848971871!GO:0005521;lamin binding;0.0411588227348368!GO:0008538;proteasome activator activity;0.0415396140254312!GO:0051325;interphase;0.042117670778525!GO:0043506;regulation of JNK activity;0.0421304076982835!GO:0043621;protein self-association;0.0421304076982835!GO:0008250;oligosaccharyl transferase complex;0.0421535847039193!GO:0019904;protein domain specific binding;0.0423953080943343!GO:0048487;beta-tubulin binding;0.0426243775148715!GO:0031123;RNA 3'-end processing;0.0433198652457453!GO:0006955;immune response;0.0444902520529218!GO:0016044;membrane organization and biogenesis;0.0447035737705889!GO:0050811;GABA receptor binding;0.0449277968218902!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0450101167064297!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0450101167064297!GO:0005819;spindle;0.0458083449047623!GO:0005758;mitochondrial intermembrane space;0.045938151975606!GO:0006213;pyrimidine nucleoside metabolic process;0.0459856461437797!GO:0051329;interphase of mitotic cell cycle;0.0465440799122313!GO:0000305;response to oxygen radical;0.0466652530456324!GO:0046854;phosphoinositide phosphorylation;0.047015020780928!GO:0008180;signalosome;0.0478334765764334!GO:0008094;DNA-dependent ATPase activity;0.048421162047396!GO:0009161;ribonucleoside monophosphate metabolic process;0.0491645638717585!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0491645638717585!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0492695646606976
|sample_id=12151
|sample_id=12151
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=POU2F1..3:3.11250546681;POU5F1:2.90505591652;FOXA2:2.25865061471;ELF1,2,4:2.07978027813;DMAP1_NCOR{1,2}_SMARC:2.01028060338;FOX{I1,J2}:1.9582385696;FOX{F1,F2,J1}:1.83918804558;TLX2:1.69978109989;FOXO1,3,4:1.6985909779;SPI1:1.6170614692;AIRE:1.57321930129;IRF1,2:1.51672521828;NFKB1_REL_RELA:1.50653038653;PBX1:1.49866927271;FOXN1:1.49073079639;FOX{D1,D2}:1.48456520294;SPIB:1.39544341045;ETS1,2:1.38160161649;BPTF:1.38131793011;RUNX1..3:1.33356635659;ELK1,4_GABP{A,B1}:1.2965;FOXP3:1.27437607433;RFX2..5_RFXANK_RFXAP:1.25351717922;FOXP1:1.1422203729;NKX6-1,2:1.12843101686;IRF7:1.08225116075;PAX3,7:1.05677150684;HBP1_HMGB_SSRP1_UBTF:1.04911479211;CREB1:1.02533282725;STAT1,3:1.01536546106;OCT4_SOX2{dimer}:0.945315048541;CRX:0.930029927289;CDX1,2,4:0.870672053211;ATF5_CREB3:0.813302022543;HES1:0.79100629313;SREBF1,2:0.781620090481;MYOD1:0.765044212094;HMX1:0.748397925086;PDX1:0.74025685611;NANOG{mouse}:0.702703555866;TGIF1:0.656547232391;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.631900473391;PAX6:0.628881283655;NKX2-2,8:0.605034956917;PAX2:0.591454127932;ATF2:0.585080804267;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.569501309885;ATF4:0.54324989932;ZEB1:0.535145533535;ZNF143:0.507813176774;YY1:0.459571805777;BREu{core}:0.456393038208;ZBTB16:0.446938472638;LMO2:0.425116365978;MYB:0.41902501871;VSX1,2:0.407062922819;PPARG:0.385228011976;PAX4:0.314512448331;CUX2:0.278864447528;NFY{A,B,C}:0.273286905905;RORA:0.267798629781;HOX{A6,A7,B6,B7}:0.262191814509;FOXL1:0.231480113727;MEF2{A,B,C,D}:0.230023286026;NKX3-1:0.223512315552;GATA6:0.208306027525;ALX1:0.208007209345;NFIL3:0.200662987701;SOX{8,9,10}:0.186830026821;NRF1:0.160310139048;SNAI1..3:0.156857857727;FOXQ1:0.15085554987;SOX5:0.145311108019;NHLH1,2:0.128683874127;T:0.126953595092;ONECUT1,2:0.123979473278;IKZF2:0.11180105237;CEBPA,B_DDIT3:0.103134019947;HIF1A:0.0674227469975;RFX1:0.0449792694279;DBP:0.0398054529895;PITX1..3:0.0241509264758;STAT5{A,B}:0.00945628732408;NKX2-1,4:0.00140631630747;bHLH_family:-0.0261293708486;E2F1..5:-0.0506701107773;TEF:-0.0641754977838;AHR_ARNT_ARNT2:-0.0703775667966;ZNF148:-0.076395458546;HOXA9_MEIS1:-0.0785515130951;POU1F1:-0.0918185735744;NFATC1..3:-0.102540081435;NR5A1,2:-0.115854957563;TAL1_TCF{3,4,12}:-0.117295464333;GLI1..3:-0.124856076688;RXRA_VDR{dimer}:-0.125721302425;ADNP_IRX_SIX_ZHX:-0.128444709062;PRRX1,2:-0.133983188577;EP300:-0.135596725797;JUN:-0.158475582601;HMGA1,2:-0.169471454277;ARID5B:-0.183985225998;AR:-0.237029967749;LEF1_TCF7_TCF7L1,2:-0.247856132486;GFI1:-0.260636070158;RBPJ:-0.294183385056;SPZ1:-0.299798163138;ESR1:-0.30358801706;MAFB:-0.307751419635;NFIX:-0.328059805301;ALX4:-0.331792709326;ATF6:-0.331811630913;RXR{A,B,G}:-0.354021997363;CDC5L:-0.355225043521;ZFP161:-0.358401944353;EVI1:-0.367512077735;TOPORS:-0.396186941405;FOSL2:-0.402819384463;HNF4A_NR2F1,2:-0.426470229615;NR6A1:-0.443019455104;HLF:-0.463746650376;TBX4,5:-0.483933497102;ZNF384:-0.48525268535;HNF1A:-0.530321430787;SRF:-0.531738321865;FOS_FOS{B,L1}_JUN{B,D}:-0.543107380832;EBF1:-0.565833704654;XBP1:-0.578065534112;NKX2-3_NKX2-5:-0.58557683884;MYFfamily:-0.600224792403;EN1,2:-0.603736406588;TBP:-0.647443451502;PAX8:-0.6512874532;BACH2:-0.664624488809;HOX{A5,B5}:-0.668767363526;PRDM1:-0.670320077079;GATA4:-0.700559760503;HAND1,2:-0.706670854928;XCPE1{core}:-0.716973332615;EGR1..3:-0.726954200425;SP1:-0.734132828254;MYBL2:-0.767971271383;ZNF238:-0.775271300952;TFAP4:-0.779386888124;NFE2L2:-0.802839162682;HOX{A4,D4}:-0.846114261033;NR1H4:-0.848256153109;MAZ:-0.853762335847;HSF1,2:-0.859369534072;STAT2,4,6:-0.874275604451;NFE2:-0.875637963647;SMAD1..7,9:-0.878555638456;NR3C1:-0.926256640517;PATZ1:-0.92758015185;MTE{core}:-0.94510224031;NANOG:-0.948171987501;MZF1:-0.96298315767;SOX2:-0.964562181431;REST:-1.00242842333;MED-1{core}:-1.03683989878;SOX17:-1.03715561661;NKX3-2:-1.08580782542;TFCP2:-1.10546208752;FOXD3:-1.13476467101;FOXM1:-1.16381430268;RREB1:-1.17943061962;GFI1B:-1.19957159082;POU6F1:-1.22356391846;GCM1,2:-1.23048628961;TP53:-1.391651355;GTF2I:-1.46562554498;TFAP2{A,C}:-1.46957039333;ZNF423:-1.47934231095;NFE2L1:-1.56344124049;UFEwm:-1.56808814557;ESRRA:-1.56888571385;MTF1:-1.58844271159;HIC1:-1.62953986723;LHX3,4:-1.63195375273;TEAD1:-1.66174431648;TFAP2B:-1.66219828507;GZF1:-1.70387882424;TFDP1:-1.7655940557;GTF2A1,2:-1.85316692269;POU3F1..4:-1.89304449037;ZIC1..3:-1.91616680966;ZBTB6:-1.92393125307;PAX5:-1.99327689532;TLX1..3_NFIC{dimer}:-2.07796386947;KLF4:-2.1060115936;IKZF1:-2.52163514916;PAX1,9:-2.58824818124
|top_motifs=POU2F1..3:3.11250546681;POU5F1:2.90505591652;FOXA2:2.25865061471;ELF1,2,4:2.07978027813;DMAP1_NCOR{1,2}_SMARC:2.01028060338;FOX{I1,J2}:1.9582385696;FOX{F1,F2,J1}:1.83918804558;TLX2:1.69978109989;FOXO1,3,4:1.6985909779;SPI1:1.6170614692;AIRE:1.57321930129;IRF1,2:1.51672521828;NFKB1_REL_RELA:1.50653038653;PBX1:1.49866927271;FOXN1:1.49073079639;FOX{D1,D2}:1.48456520294;SPIB:1.39544341045;ETS1,2:1.38160161649;BPTF:1.38131793011;RUNX1..3:1.33356635659;ELK1,4_GABP{A,B1}:1.2965;FOXP3:1.27437607433;RFX2..5_RFXANK_RFXAP:1.25351717922;FOXP1:1.1422203729;NKX6-1,2:1.12843101686;IRF7:1.08225116075;PAX3,7:1.05677150684;HBP1_HMGB_SSRP1_UBTF:1.04911479211;CREB1:1.02533282725;STAT1,3:1.01536546106;OCT4_SOX2{dimer}:0.945315048541;CRX:0.930029927289;CDX1,2,4:0.870672053211;ATF5_CREB3:0.813302022543;HES1:0.79100629313;SREBF1,2:0.781620090481;MYOD1:0.765044212094;HMX1:0.748397925086;PDX1:0.74025685611;NANOG{mouse}:0.702703555866;TGIF1:0.656547232391;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.631900473391;PAX6:0.628881283655;NKX2-2,8:0.605034956917;PAX2:0.591454127932;ATF2:0.585080804267;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.569501309885;ATF4:0.54324989932;ZEB1:0.535145533535;ZNF143:0.507813176774;YY1:0.459571805777;BREu{core}:0.456393038208;ZBTB16:0.446938472638;LMO2:0.425116365978;MYB:0.41902501871;VSX1,2:0.407062922819;PPARG:0.385228011976;PAX4:0.314512448331;CUX2:0.278864447528;NFY{A,B,C}:0.273286905905;RORA:0.267798629781;HOX{A6,A7,B6,B7}:0.262191814509;FOXL1:0.231480113727;MEF2{A,B,C,D}:0.230023286026;NKX3-1:0.223512315552;GATA6:0.208306027525;ALX1:0.208007209345;NFIL3:0.200662987701;SOX{8,9,10}:0.186830026821;NRF1:0.160310139048;SNAI1..3:0.156857857727;FOXQ1:0.15085554987;SOX5:0.145311108019;NHLH1,2:0.128683874127;T:0.126953595092;ONECUT1,2:0.123979473278;IKZF2:0.11180105237;CEBPA,B_DDIT3:0.103134019947;HIF1A:0.0674227469975;RFX1:0.0449792694279;DBP:0.0398054529895;PITX1..3:0.0241509264758;STAT5{A,B}:0.00945628732408;NKX2-1,4:0.00140631630747;bHLH_family:-0.0261293708486;E2F1..5:-0.0506701107773;TEF:-0.0641754977838;AHR_ARNT_ARNT2:-0.0703775667966;ZNF148:-0.076395458546;HOXA9_MEIS1:-0.0785515130951;POU1F1:-0.0918185735744;NFATC1..3:-0.102540081435;NR5A1,2:-0.115854957563;TAL1_TCF{3,4,12}:-0.117295464333;GLI1..3:-0.124856076688;RXRA_VDR{dimer}:-0.125721302425;ADNP_IRX_SIX_ZHX:-0.128444709062;PRRX1,2:-0.133983188577;EP300:-0.135596725797;JUN:-0.158475582601;HMGA1,2:-0.169471454277;ARID5B:-0.183985225998;AR:-0.237029967749;LEF1_TCF7_TCF7L1,2:-0.247856132486;GFI1:-0.260636070158;RBPJ:-0.294183385056;SPZ1:-0.299798163138;ESR1:-0.30358801706;MAFB:-0.307751419635;NFIX:-0.328059805301;ALX4:-0.331792709326;ATF6:-0.331811630913;RXR{A,B,G}:-0.354021997363;CDC5L:-0.355225043521;ZFP161:-0.358401944353;EVI1:-0.367512077735;TOPORS:-0.396186941405;FOSL2:-0.402819384463;HNF4A_NR2F1,2:-0.426470229615;NR6A1:-0.443019455104;HLF:-0.463746650376;TBX4,5:-0.483933497102;ZNF384:-0.48525268535;HNF1A:-0.530321430787;SRF:-0.531738321865;FOS_FOS{B,L1}_JUN{B,D}:-0.543107380832;EBF1:-0.565833704654;XBP1:-0.578065534112;NKX2-3_NKX2-5:-0.58557683884;MYFfamily:-0.600224792403;EN1,2:-0.603736406588;TBP:-0.647443451502;PAX8:-0.6512874532;BACH2:-0.664624488809;HOX{A5,B5}:-0.668767363526;PRDM1:-0.670320077079;GATA4:-0.700559760503;HAND1,2:-0.706670854928;XCPE1{core}:-0.716973332615;EGR1..3:-0.726954200425;SP1:-0.734132828254;MYBL2:-0.767971271383;ZNF238:-0.775271300952;TFAP4:-0.779386888124;NFE2L2:-0.802839162682;HOX{A4,D4}:-0.846114261033;NR1H4:-0.848256153109;MAZ:-0.853762335847;HSF1,2:-0.859369534072;STAT2,4,6:-0.874275604451;NFE2:-0.875637963647;SMAD1..7,9:-0.878555638456;NR3C1:-0.926256640517;PATZ1:-0.92758015185;MTE{core}:-0.94510224031;NANOG:-0.948171987501;MZF1:-0.96298315767;SOX2:-0.964562181431;REST:-1.00242842333;MED-1{core}:-1.03683989878;SOX17:-1.03715561661;NKX3-2:-1.08580782542;TFCP2:-1.10546208752;FOXD3:-1.13476467101;FOXM1:-1.16381430268;RREB1:-1.17943061962;GFI1B:-1.19957159082;POU6F1:-1.22356391846;GCM1,2:-1.23048628961;TP53:-1.391651355;GTF2I:-1.46562554498;TFAP2{A,C}:-1.46957039333;ZNF423:-1.47934231095;NFE2L1:-1.56344124049;UFEwm:-1.56808814557;ESRRA:-1.56888571385;MTF1:-1.58844271159;HIC1:-1.62953986723;LHX3,4:-1.63195375273;TEAD1:-1.66174431648;TFAP2B:-1.66219828507;GZF1:-1.70387882424;TFDP1:-1.7655940557;GTF2A1,2:-1.85316692269;POU3F1..4:-1.89304449037;ZIC1..3:-1.91616680966;ZBTB6:-1.92393125307;PAX5:-1.99327689532;TLX1..3_NFIC{dimer}:-2.07796386947;KLF4:-2.1060115936;IKZF1:-2.52163514916;PAX1,9:-2.58824818124
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12151-128F9;search_select_hide=table117:FF:12151-128F9
}}
}}

Latest revision as of 18:32, 4 June 2020

Name:CD19+ B Cells (pluriselect), donor090325, donation1
Species:Human (Homo sapiens)
Library ID:CNhs12531
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
ageNA
cell typeb cell
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005465
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12531 CAGE DRX008053 DRR008925
Accession ID Hg19

Library idBAMCTSS
CNhs12531 DRZ000350 DRZ001735
Accession ID Hg38

Library idBAMCTSS
CNhs12531 DRZ011700 DRZ013085
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.068
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.172
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.154
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.268
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.154
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.154
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.363
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.38
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.456
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.307
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.722
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.179
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary1.314
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.246
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.153
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.57
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.154
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.154
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.536
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.289
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.917
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.293
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.435
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.378
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.268
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.268
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.313
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix1.017
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.75
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.154
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12531

Jaspar motifP-value
MA0002.27.69392e-5
MA0003.10.886
MA0004.10.156
MA0006.10.394
MA0007.10.554
MA0009.10.712
MA0014.10.28
MA0017.10.164
MA0018.20.0109
MA0019.10.795
MA0024.10.547
MA0025.10.815
MA0027.10.717
MA0028.11.72697e-6
MA0029.10.33
MA0030.10.00766
MA0031.10.0636
MA0035.20.927
MA0038.10.785
MA0039.20.121
MA0040.10.985
MA0041.10.209
MA0042.10.817
MA0043.10.00359
MA0046.10.59
MA0047.20.193
MA0048.10.561
MA0050.16.32324e-12
MA0051.14.66978e-6
MA0052.10.406
MA0055.10.367
MA0057.10.531
MA0058.10.0627
MA0059.10.245
MA0060.10.683
MA0061.14.57432e-10
MA0062.26.77707e-17
MA0065.20.0863
MA0066.10.611
MA0067.10.0464
MA0068.10.00122
MA0069.10.591
MA0070.10.228
MA0071.10.973
MA0072.10.829
MA0073.10.545
MA0074.10.935
MA0076.12.46711e-10
MA0077.10.17
MA0078.10.739
MA0079.20.66
MA0080.22.94931e-12
MA0081.16.90799e-5
MA0083.10.263
MA0084.10.298
MA0087.10.146
MA0088.10.0985
MA0090.19.29019e-5
MA0091.10.835
MA0092.10.62
MA0093.10.161
MA0099.21.06481e-4
MA0100.10.0758
MA0101.13.35352e-8
MA0102.20.0146
MA0103.10.0316
MA0104.20.0748
MA0105.11.85185e-9
MA0106.10.244
MA0107.12.07042e-8
MA0108.24.16751e-5
MA0111.10.409
MA0112.20.202
MA0113.10.653
MA0114.10.205
MA0115.10.428
MA0116.13.07384e-5
MA0117.10.575
MA0119.10.419
MA0122.10.414
MA0124.10.442
MA0125.10.962
MA0131.10.0167
MA0135.10.0576
MA0136.12.29257e-20
MA0137.20.414
MA0138.20.751
MA0139.10.346
MA0140.10.722
MA0141.10.718
MA0142.10.383
MA0143.10.753
MA0144.10.988
MA0145.10.243
MA0146.10.196
MA0147.10.122
MA0148.10.914
MA0149.10.229
MA0150.10.867
MA0152.10.235
MA0153.10.0122
MA0154.12.65054e-4
MA0155.10.585
MA0156.11.4178e-16
MA0157.10.128
MA0159.10.164
MA0160.10.396
MA0162.10.986
MA0163.11.33777e-6
MA0164.10.676
MA0258.10.339
MA0259.10.483



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12531

Novel motifP-value
10.183
100.0267
1000.487
1010.386
1020.958
1030.782
1040.211
1050.365
1060.683
1070.12
1080.133
1090.114
110.239
1100.341
1110.207
1120.412
1130.0451
1140.693
1150.775
1160.671
1174.47247e-4
1180.179
1190.957
120.823
1200.648
1210.209
1220.621
1230.0251
1240.534
1250.125
1260.218
1270.971
1280.313
1290.332
130.287
1300.461
1310.584
1320.338
1330.04
1340.463
1350.674
1360.215
1370.0131
1380.402
1390.203
140.301
1400.777
1410.451
1420.544
1430.236
1440.661
1450.189
1460.333
1470.0325
1480.304
1490.817
150.204
1500.877
1510.832
1520.794
1530.861
1540.909
1550.0189
1560.733
1570.227
1580.237
1590.0817
160.542
1600.845
1610.224
1620.188
1630.39
1640.239
1650.18
1660.515
1670.104
1680.25
1690.882
170.741
180.752
190.465
20.356
200.184
210.841
220.941
230.489
240.7
250.0277
260.339
270.819
280.343
290.0417
30.066
300.144
310.919
320.0965
330.355
340.937
350.193
360.0399
370.0905
380.486
390.408
40.912
400.214
410.133
420.135
430.27
440.953
450.801
460.538
470.132
480.328
490.192
50.469
500.983
510.762
520.545
530.368
540.979
550.366
560.827
570.765
580.05
590.858
60.742
600.494
610.0492
620.125
630.812
640.538
650.965
660.897
670.219
680.524
690.67
70.136
700.355
710.0562
720.0335
730.428
740.31
750.00292
760.025
770.283
780.284
790.327
80.855
800.0121
810.204
820.427
830.971
840.16
850.723
860.0577
870.0544
880.728
890.401
90.767
900.0977
910.637
920.855
930.985
940.0827
950.00472
960.773
970.603
980.335
990.00383



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12531


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FF:12151-128F9&oldid=4576919"