FF:10209-103G2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005473 | ||
|accession_numbers=CAGE;DRX008743;DRR009615;DRZ001040;DRZ002425;DRZ012390;DRZ013775 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000341,UBERON:0000974,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0000153,UBERON:0007811 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010209 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520adult.CNhs12858.10209-103G2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520adult.CNhs12858.10209-103G2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520adult.CNhs12858.10209-103G2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/throat%252c%2520adult.CNhs12858.10209-103G2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/throat%252c%2520adult.CNhs12858.10209-103G2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10209-103G2 | |id=FF:10209-103G2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010209 | ||
|is_obsolete= | |||
|library_id=CNhs12858 | |||
|library_id_phase_based=2:CNhs12858 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10209 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10209 | |||
|name=throat, adult | |name=throat, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12858,LSID973,release012,COMPLETED | |profile_hcage=CNhs12858,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.154262022540406,0.0419722830585956,0,0,0.905078913537137,0,0.107542372087798,0.267860402174185,0.416614245862181,0.167493139523025,0,0,0,0,0,0,0,0,0,0.0839445661171913,0.0839445661171913,0,0,-0.153323010348428,0,0,0,0.0419722830585956,0.315166032443167,-0.0140133301508662,0,0,0.134903812395322,0,0,0,0,0,0,0,0,0,0,0,0,0.0917317715764862,0,0,0,0,0,0,0,0,0.0177572619457613,0,0.0674628085676355,0,0.0839445661171913,0.154262022540406,0.0649654126375418,0,-0.0969923612426051,0,0,-0.0133990610959057,0.154262022540406,0,0,0,0,0,0,0,0.0839445661171913,0,0,0.077131011270203,0,0,0,0,0.0511271980847593,0.0696705927562242,0.0419722830585956,0,0,0,0,0.0839445661171913,0.154262022540406,0.214764912010815,0,0.0839445661171913,0.06026742563863,0.0945146480271353,0.0419722830585956,0,0,0,0.116729560773108,0.136120002934146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0375566071646313,0.267860402174185,0,0,0.206677469885346,0.182363958330012,0.0839445661171913,0,0,0,0,0 | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234263-10 | |rna_catalog_number=R1234263-10 | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age=M | |sample_age=M | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.0282704224133e-215!GO:0005737;cytoplasm;6.4332159241492e-210!GO:0043226;organelle;1.01276484861107e-130!GO:0043229;intracellular organelle;2.29723928545291e-130!GO:0044444;cytoplasmic part;3.0248239316344e-130!GO:0043227;membrane-bound organelle;5.73264038145822e-103!GO:0043231;intracellular membrane-bound organelle;6.4267005230773e-103!GO:0005515;protein binding;2.35318231075997e-99!GO:0044422;organelle part;5.19358530812101e-92!GO:0044446;intracellular organelle part;1.27318588604863e-90!GO:0032991;macromolecular complex;3.9074286331632e-73!GO:0005739;mitochondrion;2.64702069217275e-53!GO:0030529;ribonucleoprotein complex;2.03297530646621e-51!GO:0044237;cellular metabolic process;1.8972325349533e-45!GO:0043233;organelle lumen;1.16951320817316e-42!GO:0031974;membrane-enclosed lumen;1.16951320817316e-42!GO:0019538;protein metabolic process;2.68787563032302e-42!GO:0044238;primary metabolic process;5.28772789502377e-42!GO:0003723;RNA binding;5.57634570109863e-42!GO:0043234;protein complex;8.92453314483591e-41!GO:0016043;cellular component organization and biogenesis;1.80407254510954e-40!GO:0044429;mitochondrial part;1.14526523443967e-38!GO:0043170;macromolecule metabolic process;1.14526523443967e-38!GO:0044260;cellular macromolecule metabolic process;5.43116758131458e-38!GO:0043228;non-membrane-bound organelle;1.39397126834433e-36!GO:0043232;intracellular non-membrane-bound organelle;1.39397126834433e-36!GO:0044267;cellular protein metabolic process;4.4226895500564e-36!GO:0031090;organelle membrane;7.9021805143337e-36!GO:0005829;cytosol;1.28236464325086e-35!GO:0044428;nuclear part;3.72787518699315e-35!GO:0005840;ribosome;1.34249227436378e-34!GO:0006412;translation;2.27896334451215e-34!GO:0031967;organelle envelope;2.80613086414657e-34!GO:0031975;envelope;4.38600974331264e-34!GO:0033036;macromolecule localization;3.75800890134483e-31!GO:0003735;structural constituent of ribosome;1.03574349609018e-30!GO:0015031;protein transport;4.71733969360275e-29!GO:0008104;protein localization;6.54648220648459e-29!GO:0045184;establishment of protein localization;2.51549723376519e-28!GO:0009058;biosynthetic process;3.32281634778304e-27!GO:0005634;nucleus;3.32281634778304e-27!GO:0009059;macromolecule biosynthetic process;4.16653647747978e-27!GO:0044249;cellular biosynthetic process;4.97466780540468e-27!GO:0005740;mitochondrial envelope;1.23139913848395e-26!GO:0033279;ribosomal subunit;1.50345514287999e-26!GO:0031966;mitochondrial membrane;3.78607633558583e-26!GO:0008092;cytoskeletal protein binding;1.45342434349979e-25!GO:0019866;organelle inner membrane;4.55842739945739e-25!GO:0046907;intracellular transport;8.73474426592062e-25!GO:0005743;mitochondrial inner membrane;3.35883684598789e-24!GO:0016071;mRNA metabolic process;3.72997394689132e-24!GO:0065003;macromolecular complex assembly;1.16645814076148e-23!GO:0022607;cellular component assembly;3.48464894974747e-23!GO:0008380;RNA splicing;4.05015478703133e-23!GO:0006396;RNA processing;4.57602814754638e-22!GO:0031981;nuclear lumen;9.35136152176427e-22!GO:0006886;intracellular protein transport;3.59062608179522e-21!GO:0006119;oxidative phosphorylation;4.97771727414399e-21!GO:0006996;organelle organization and biogenesis;1.36434022843407e-20!GO:0006397;mRNA processing;6.43208034704842e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.11330675573847e-19!GO:0044445;cytosolic part;1.27832506498663e-18!GO:0044455;mitochondrial membrane part;2.91069590679616e-18!GO:0005746;mitochondrial respiratory chain;3.45616257081435e-18!GO:0048770;pigment granule;5.72850125624851e-18!GO:0042470;melanosome;5.72850125624851e-18!GO:0008134;transcription factor binding;1.14104201062686e-16!GO:0003779;actin binding;1.78404376584899e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.42363811873194e-16!GO:0031980;mitochondrial lumen;2.42363811873194e-16!GO:0005759;mitochondrial matrix;2.42363811873194e-16!GO:0051641;cellular localization;4.27392254596627e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.27392254596627e-16!GO:0003954;NADH dehydrogenase activity;4.27392254596627e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.27392254596627e-16!GO:0051649;establishment of cellular localization;6.41903211672129e-16!GO:0015629;actin cytoskeleton;6.77540508562191e-16!GO:0043283;biopolymer metabolic process;7.88549671633054e-16!GO:0005783;endoplasmic reticulum;8.73870248373501e-16!GO:0005681;spliceosome;1.93552809287877e-15!GO:0000166;nucleotide binding;2.99623788646725e-15!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.61486530895182e-15!GO:0015935;small ribosomal subunit;1.18195179000757e-14!GO:0044265;cellular macromolecule catabolic process;1.85372529942886e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.54668228811369e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;4.61091161127948e-14!GO:0005654;nucleoplasm;4.89662888275489e-14!GO:0016192;vesicle-mediated transport;5.54281415113636e-14!GO:0030964;NADH dehydrogenase complex (quinone);7.83201490577777e-14!GO:0045271;respiratory chain complex I;7.83201490577777e-14!GO:0005747;mitochondrial respiratory chain complex I;7.83201490577777e-14!GO:0006511;ubiquitin-dependent protein catabolic process;8.1779520302254e-14!GO:0019941;modification-dependent protein catabolic process;9.00512386101193e-14!GO:0043632;modification-dependent macromolecule catabolic process;9.00512386101193e-14!GO:0010467;gene expression;1.16399538231329e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.4460539018134e-13!GO:0042773;ATP synthesis coupled electron transport;1.4460539018134e-13!GO:0044257;cellular protein catabolic process;1.52682787029197e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.3927185437909e-13!GO:0022618;protein-RNA complex assembly;2.78110058282323e-13!GO:0005856;cytoskeleton;3.40863713920408e-13!GO:0044248;cellular catabolic process;4.83189679291462e-13!GO:0030036;actin cytoskeleton organization and biogenesis;5.27120496714539e-13!GO:0015934;large ribosomal subunit;5.27120496714539e-13!GO:0044449;contractile fiber part;6.50058552995306e-13!GO:0005794;Golgi apparatus;1.39247115810557e-12!GO:0006512;ubiquitin cycle;1.57864080791176e-12!GO:0008135;translation factor activity, nucleic acid binding;1.58669342452269e-12!GO:0051186;cofactor metabolic process;2.16492435218364e-12!GO:0030029;actin filament-based process;2.38824432637696e-12!GO:0006605;protein targeting;2.44889844320388e-12!GO:0048523;negative regulation of cellular process;2.60023122670993e-12!GO:0043292;contractile fiber;3.47241693002934e-12!GO:0006457;protein folding;3.98633519379388e-12!GO:0012505;endomembrane system;4.23771335963127e-12!GO:0043412;biopolymer modification;7.54965051950918e-12!GO:0044451;nucleoplasm part;1.09308905375568e-11!GO:0009057;macromolecule catabolic process;1.20660037583735e-11!GO:0043285;biopolymer catabolic process;1.38018179033286e-11!GO:0008307;structural constituent of muscle;1.38988953891637e-11!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.42821327868363e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;1.70954705327267e-11!GO:0030163;protein catabolic process;1.81672762466733e-11!GO:0016462;pyrophosphatase activity;1.83563802853738e-11!GO:0017111;nucleoside-triphosphatase activity;2.39872993240126e-11!GO:0043687;post-translational protein modification;2.60772139038923e-11!GO:0006464;protein modification process;3.51673537039583e-11!GO:0000502;proteasome complex (sensu Eukaryota);3.98253630265739e-11!GO:0016874;ligase activity;4.35292501383097e-11!GO:0048519;negative regulation of biological process;5.46250858176032e-11!GO:0048193;Golgi vesicle transport;5.62146165611466e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.52902180338167e-11!GO:0030016;myofibril;7.89697979084524e-11!GO:0012501;programmed cell death;8.41274233651818e-11!GO:0017076;purine nucleotide binding;9.8105098826713e-11!GO:0006915;apoptosis;1.12662927624862e-10!GO:0005761;mitochondrial ribosome;1.45343079834962e-10!GO:0000313;organellar ribosome;1.45343079834962e-10!GO:0003712;transcription cofactor activity;1.52324027112082e-10!GO:0006461;protein complex assembly;2.64389225788763e-10!GO:0006366;transcription from RNA polymerase II promoter;4.07804542520802e-10!GO:0009055;electron carrier activity;4.1792055311309e-10!GO:0032553;ribonucleotide binding;4.48477000783637e-10!GO:0032555;purine ribonucleotide binding;4.48477000783637e-10!GO:0030017;sarcomere;7.64615411138324e-10!GO:0008219;cell death;7.96398332038523e-10!GO:0016265;death;7.96398332038523e-10!GO:0006446;regulation of translational initiation;1.27678123467775e-09!GO:0015980;energy derivation by oxidation of organic compounds;1.31832176724055e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.72845785152851e-09!GO:0006091;generation of precursor metabolites and energy;1.93327411240857e-09!GO:0045333;cellular respiration;2.14676305964989e-09!GO:0006732;coenzyme metabolic process;2.36184388847315e-09!GO:0007010;cytoskeleton organization and biogenesis;2.77720752121534e-09!GO:0044432;endoplasmic reticulum part;3.2608559633325e-09!GO:0003743;translation initiation factor activity;3.51410813215837e-09!GO:0006913;nucleocytoplasmic transport;4.13219248725647e-09!GO:0006413;translational initiation;5.68678125161962e-09!GO:0009060;aerobic respiration;6.11089385284869e-09!GO:0008565;protein transporter activity;6.9427629637388e-09!GO:0016604;nuclear body;7.5218299709684e-09!GO:0051082;unfolded protein binding;8.1017851029956e-09!GO:0051246;regulation of protein metabolic process;8.89456916489175e-09!GO:0016564;transcription repressor activity;8.9776283677016e-09!GO:0051169;nuclear transport;9.3142807886088e-09!GO:0019829;cation-transporting ATPase activity;1.27183008253806e-08!GO:0009056;catabolic process;1.77179135917201e-08!GO:0005635;nuclear envelope;2.10330831853297e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.33440902457413e-08!GO:0005730;nucleolus;2.75624764155594e-08!GO:0006793;phosphorus metabolic process;2.95715383988252e-08!GO:0006796;phosphate metabolic process;2.95715383988252e-08!GO:0031982;vesicle;3.46442607373673e-08!GO:0016607;nuclear speck;3.9627669929935e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.93913214683829e-08!GO:0031988;membrane-bound vesicle;5.44398283969089e-08!GO:0030554;adenyl nucleotide binding;6.47603344906662e-08!GO:0008639;small protein conjugating enzyme activity;6.49015914413357e-08!GO:0031965;nuclear membrane;6.51664270643258e-08!GO:0005793;ER-Golgi intermediate compartment;6.52124618470024e-08!GO:0006099;tricarboxylic acid cycle;6.71759774557957e-08!GO:0046356;acetyl-CoA catabolic process;6.71759774557957e-08!GO:0004842;ubiquitin-protein ligase activity;8.85837187980459e-08!GO:0017038;protein import;8.90010993278671e-08!GO:0031410;cytoplasmic vesicle;9.13532196928381e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.61334214595897e-08!GO:0005768;endosome;1.01559020131649e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.3064915236671e-07!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.3095575895774e-07!GO:0006084;acetyl-CoA metabolic process;1.72853654968128e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.88168180214731e-07!GO:0000375;RNA splicing, via transesterification reactions;1.88168180214731e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.88168180214731e-07!GO:0032559;adenyl ribonucleotide binding;2.27014428064725e-07!GO:0007517;muscle development;2.32051563998771e-07!GO:0042802;identical protein binding;2.56278773680338e-07!GO:0019899;enzyme binding;2.57861740035284e-07!GO:0005524;ATP binding;2.94910119228647e-07!GO:0019787;small conjugating protein ligase activity;3.1549735700064e-07!GO:0009109;coenzyme catabolic process;3.30643920095469e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.71063093762637e-07!GO:0051187;cofactor catabolic process;5.68513633204543e-07!GO:0016529;sarcoplasmic reticulum;5.98030895344574e-07!GO:0016528;sarcoplasm;5.98030895344574e-07!GO:0015986;ATP synthesis coupled proton transport;7.42671793682817e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.42671793682817e-07!GO:0016310;phosphorylation;8.03727794997309e-07!GO:0006163;purine nucleotide metabolic process;8.6951672103043e-07!GO:0009150;purine ribonucleotide metabolic process;9.31904105648528e-07!GO:0031252;leading edge;1.01856058046239e-06!GO:0031674;I band;1.22342529722375e-06!GO:0006259;DNA metabolic process;1.32980388772321e-06!GO:0003714;transcription corepressor activity;1.40673803390413e-06!GO:0009892;negative regulation of metabolic process;1.48628705977841e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.57952876787375e-06!GO:0006606;protein import into nucleus;1.57968004051523e-06!GO:0042981;regulation of apoptosis;1.81877031611641e-06!GO:0045259;proton-transporting ATP synthase complex;1.98108060167322e-06!GO:0051170;nuclear import;2.29892840409807e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.29892840409807e-06!GO:0030120;vesicle coat;2.52703767783754e-06!GO:0030662;coated vesicle membrane;2.52703767783754e-06!GO:0016491;oxidoreductase activity;2.68699148753581e-06!GO:0009259;ribonucleotide metabolic process;2.88483793967762e-06!GO:0003924;GTPase activity;3.08129085158086e-06!GO:0051789;response to protein stimulus;3.15511137634451e-06!GO:0006986;response to unfolded protein;3.15511137634451e-06!GO:0016881;acid-amino acid ligase activity;3.38371268279515e-06!GO:0006916;anti-apoptosis;3.50616254463013e-06!GO:0043067;regulation of programmed cell death;3.57481065334618e-06!GO:0016887;ATPase activity;4.21303553446374e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.52078673348683e-06!GO:0016481;negative regulation of transcription;4.79476866350627e-06!GO:0031324;negative regulation of cellular metabolic process;5.47547107361908e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.60736270157123e-06!GO:0009144;purine nucleoside triphosphate metabolic process;5.60736270157123e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.62735922105831e-06!GO:0005789;endoplasmic reticulum membrane;5.78301610622217e-06!GO:0051128;regulation of cellular component organization and biogenesis;5.79772933933919e-06!GO:0009199;ribonucleoside triphosphate metabolic process;6.36876287126488e-06!GO:0016044;membrane organization and biogenesis;6.46025202652167e-06!GO:0009141;nucleoside triphosphate metabolic process;6.62499198342175e-06!GO:0046034;ATP metabolic process;7.89266856061493e-06!GO:0006164;purine nucleotide biosynthetic process;8.37929505559616e-06!GO:0006950;response to stress;8.75275782835969e-06!GO:0043069;negative regulation of programmed cell death;8.90219449934193e-06!GO:0009152;purine ribonucleotide biosynthetic process;9.18274678274797e-06!GO:0006979;response to oxidative stress;1.00796866786169e-05!GO:0043066;negative regulation of apoptosis;1.03537810701856e-05!GO:0048475;coated membrane;1.56481657599295e-05!GO:0030117;membrane coat;1.56481657599295e-05!GO:0051188;cofactor biosynthetic process;1.56754768351456e-05!GO:0005773;vacuole;1.58229302158799e-05!GO:0048471;perinuclear region of cytoplasm;1.79566623633744e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.37234608241556e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.37234608241556e-05!GO:0045786;negative regulation of progression through cell cycle;2.37344003526244e-05!GO:0050789;regulation of biological process;2.39392392301198e-05!GO:0007264;small GTPase mediated signal transduction;2.44261676137823e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.57177370089908e-05!GO:0030018;Z disc;2.60847787876324e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.71055794105193e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.71055794105193e-05!GO:0006754;ATP biosynthetic process;2.88905629113459e-05!GO:0006753;nucleoside phosphate metabolic process;2.88905629113459e-05!GO:0005770;late endosome;2.93046260609986e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.97064586924058e-05!GO:0003713;transcription coactivator activity;2.99953211529662e-05!GO:0022890;inorganic cation transmembrane transporter activity;3.5294704771933e-05!GO:0009260;ribonucleotide biosynthetic process;3.56024685361831e-05!GO:0005912;adherens junction;3.71237194121034e-05!GO:0000323;lytic vacuole;4.26618285269937e-05!GO:0005764;lysosome;4.26618285269937e-05!GO:0044453;nuclear membrane part;4.89817207514623e-05!GO:0005788;endoplasmic reticulum lumen;5.82309387679155e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.51909699675672e-05!GO:0050794;regulation of cellular process;6.59834506435228e-05!GO:0005839;proteasome core complex (sensu Eukaryota);6.74751459703378e-05!GO:0005523;tropomyosin binding;6.85873872113243e-05!GO:0005798;Golgi-associated vesicle;7.14608663213195e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;7.81136655197933e-05!GO:0014706;striated muscle development;8.5818624071535e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.84873077832229e-05!GO:0016563;transcription activator activity;0.000101567631121272!GO:0042623;ATPase activity, coupled;0.000105362237339479!GO:0005525;GTP binding;0.000106225194955353!GO:0048522;positive regulation of cellular process;0.000108688472179536!GO:0007049;cell cycle;0.000119966264807057!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000129802490060658!GO:0007265;Ras protein signal transduction;0.000144051036230867!GO:0030133;transport vesicle;0.000151442376535799!GO:0044431;Golgi apparatus part;0.000169567727515417!GO:0045892;negative regulation of transcription, DNA-dependent;0.000178843843249676!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000203829689972624!GO:0006323;DNA packaging;0.000223938191579899!GO:0051427;hormone receptor binding;0.000234728135646372!GO:0043566;structure-specific DNA binding;0.000237587679508929!GO:0005762;mitochondrial large ribosomal subunit;0.000237832232283726!GO:0000315;organellar large ribosomal subunit;0.000237832232283726!GO:0006613;cotranslational protein targeting to membrane;0.000240000905027806!GO:0000245;spliceosome assembly;0.000247709010149677!GO:0005741;mitochondrial outer membrane;0.000248464105275273!GO:0032446;protein modification by small protein conjugation;0.000252958451088228!GO:0030532;small nuclear ribonucleoprotein complex;0.000294452982151207!GO:0005643;nuclear pore;0.000303985368629758!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000309381665659518!GO:0004812;aminoacyl-tRNA ligase activity;0.000309381665659518!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000309381665659518!GO:0016567;protein ubiquitination;0.000323649799089046!GO:0019843;rRNA binding;0.000346208237873902!GO:0031968;organelle outer membrane;0.00035271450398875!GO:0016197;endosome transport;0.000358924013088337!GO:0004298;threonine endopeptidase activity;0.000358924013088337!GO:0007005;mitochondrion organization and biogenesis;0.000376700341883556!GO:0000151;ubiquitin ligase complex;0.000378195079450798!GO:0051287;NAD binding;0.000390612900641535!GO:0006897;endocytosis;0.000390612900641535!GO:0010324;membrane invagination;0.000390612900641535!GO:0019867;outer membrane;0.000395279833770324!GO:0003012;muscle system process;0.000395279833770324!GO:0006936;muscle contraction;0.000395279833770324!GO:0000074;regulation of progression through cell cycle;0.000418085797277844!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000418085797277844!GO:0044440;endosomal part;0.000425208729717726!GO:0010008;endosome membrane;0.000425208729717726!GO:0065002;intracellular protein transport across a membrane;0.000435819813115784!GO:0035257;nuclear hormone receptor binding;0.000439438130586657!GO:0006941;striated muscle contraction;0.000443675158570131!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000450837733393271!GO:0031032;actomyosin structure organization and biogenesis;0.000491640229942727!GO:0051726;regulation of cell cycle;0.000508185381634251!GO:0045893;positive regulation of transcription, DNA-dependent;0.000508913051653754!GO:0008154;actin polymerization and/or depolymerization;0.00050910253996806!GO:0001666;response to hypoxia;0.000517580755692425!GO:0009108;coenzyme biosynthetic process;0.000560756877031136!GO:0043038;amino acid activation;0.000563194296812694!GO:0006418;tRNA aminoacylation for protein translation;0.000563194296812694!GO:0043039;tRNA aminoacylation;0.000563194296812694!GO:0006414;translational elongation;0.000568206043050594!GO:0015992;proton transport;0.000583561935684739!GO:0045941;positive regulation of transcription;0.00060091379050946!GO:0005865;striated muscle thin filament;0.000619172691484014!GO:0048518;positive regulation of biological process;0.000623318120076767!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.000628201735273902!GO:0033043;regulation of organelle organization and biogenesis;0.000628201735273902!GO:0006818;hydrogen transport;0.000692542839068834!GO:0050662;coenzyme binding;0.000693342760426661!GO:0005791;rough endoplasmic reticulum;0.000697534283978315!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000749442230135606!GO:0032561;guanyl ribonucleotide binding;0.000749442230135606!GO:0019001;guanyl nucleotide binding;0.000749442230135606!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000751809334221633!GO:0007243;protein kinase cascade;0.000756341697975203!GO:0030031;cell projection biogenesis;0.000756698917840721!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000773976842528075!GO:0030027;lamellipodium;0.000831121948446443!GO:0003697;single-stranded DNA binding;0.000845268221702745!GO:0008361;regulation of cell size;0.000862068159773162!GO:0007519;skeletal muscle development;0.000903529591229629!GO:0042254;ribosome biogenesis and assembly;0.000914120073731878!GO:0050657;nucleic acid transport;0.000941132555167896!GO:0051236;establishment of RNA localization;0.000941132555167896!GO:0050658;RNA transport;0.000941132555167896!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00095636267748875!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00095636267748875!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00095636267748875!GO:0046983;protein dimerization activity;0.000993118884510641!GO:0016049;cell growth;0.00101073449618915!GO:0006403;RNA localization;0.00110344456221911!GO:0005905;coated pit;0.00121608994015781!GO:0009117;nucleotide metabolic process;0.00124355070455388!GO:0016070;RNA metabolic process;0.00124355070455388!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00126405855109852!GO:0003746;translation elongation factor activity;0.00129860057517442!GO:0033017;sarcoplasmic reticulum membrane;0.00130271055390642!GO:0006752;group transfer coenzyme metabolic process;0.00131552885363532!GO:0009966;regulation of signal transduction;0.00133515908515268!GO:0033673;negative regulation of kinase activity;0.0013469318304825!GO:0006469;negative regulation of protein kinase activity;0.0013469318304825!GO:0001726;ruffle;0.00145140723933283!GO:0044262;cellular carbohydrate metabolic process;0.00156452721179948!GO:0003676;nucleic acid binding;0.00159271593903232!GO:0007266;Rho protein signal transduction;0.00162290777944694!GO:0043021;ribonucleoprotein binding;0.00177603433705884!GO:0043284;biopolymer biosynthetic process;0.00179595581479275!GO:0030832;regulation of actin filament length;0.00195070132650545!GO:0005083;small GTPase regulator activity;0.00198152837654767!GO:0000314;organellar small ribosomal subunit;0.00203254878857383!GO:0005763;mitochondrial small ribosomal subunit;0.00203254878857383!GO:0003724;RNA helicase activity;0.00205505404660635!GO:0032535;regulation of cellular component size;0.00217505138770241!GO:0005938;cell cortex;0.00238533266115391!GO:0016568;chromatin modification;0.00238533266115391!GO:0006118;electron transport;0.00238742990385933!GO:0051920;peroxiredoxin activity;0.00238742990385933!GO:0005913;cell-cell adherens junction;0.00248470604393164!GO:0015630;microtubule cytoskeleton;0.00263461443243682!GO:0065007;biological regulation;0.00263461443243682!GO:0016791;phosphoric monoester hydrolase activity;0.00271619585181564!GO:0001558;regulation of cell growth;0.00290852443490335!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.00305175086815837!GO:0043623;cellular protein complex assembly;0.00305249792505106!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00309019696566179!GO:0051276;chromosome organization and biogenesis;0.00309019696566179!GO:0031589;cell-substrate adhesion;0.00318488428280228!GO:0051087;chaperone binding;0.00340184110402256!GO:0016853;isomerase activity;0.00374392909944811!GO:0007160;cell-matrix adhesion;0.00374548479340456!GO:0030658;transport vesicle membrane;0.00380583818956253!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00380583818956253!GO:0003690;double-stranded DNA binding;0.00382094123635703!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00395025389554503!GO:0015002;heme-copper terminal oxidase activity;0.00395025389554503!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00395025389554503!GO:0004129;cytochrome-c oxidase activity;0.00395025389554503!GO:0051348;negative regulation of transferase activity;0.00405233384814371!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00405233384814371!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00405233384814371!GO:0035258;steroid hormone receptor binding;0.00407828865952632!GO:0006635;fatty acid beta-oxidation;0.00412486653128344!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00428753865882671!GO:0005885;Arp2/3 protein complex;0.00428753865882671!GO:0006333;chromatin assembly or disassembly;0.00429197846511087!GO:0006974;response to DNA damage stimulus;0.00429197846511087!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00429197846511087!GO:0015399;primary active transmembrane transporter activity;0.00429197846511087!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00431942071034784!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00442051817937067!GO:0005667;transcription factor complex;0.00458548810751338!GO:0005048;signal sequence binding;0.00471581719708737!GO:0000302;response to reactive oxygen species;0.0047832896031268!GO:0016859;cis-trans isomerase activity;0.0048176395294564!GO:0005769;early endosome;0.00486709556006247!GO:0006612;protein targeting to membrane;0.0048675043274856!GO:0030132;clathrin coat of coated pit;0.00488277191003583!GO:0000139;Golgi membrane;0.00488976465136699!GO:0065004;protein-DNA complex assembly;0.00509703398410712!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00519065991399675!GO:0030055;cell-matrix junction;0.00519794951362297!GO:0006607;NLS-bearing substrate import into nucleus;0.00528037229254277!GO:0005924;cell-substrate adherens junction;0.00531622643808891!GO:0055001;muscle cell development;0.00531622643808891!GO:0030239;myofibril assembly;0.00531622643808891!GO:0055002;striated muscle cell development;0.00531622643808891!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00531622643808891!GO:0008026;ATP-dependent helicase activity;0.00535714473810908!GO:0030118;clathrin coat;0.00571125877206835!GO:0007242;intracellular signaling cascade;0.0061207771748669!GO:0008064;regulation of actin polymerization and/or depolymerization;0.00620944260622047!GO:0031072;heat shock protein binding;0.00622327622241227!GO:0004386;helicase activity;0.0062448485600317!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00656807727592694!GO:0045445;myoblast differentiation;0.00660944570683998!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00705606995059663!GO:0051028;mRNA transport;0.0072056319835058!GO:0030867;rough endoplasmic reticulum membrane;0.00735096006377234!GO:0045454;cell redox homeostasis;0.00737225022008708!GO:0046314;phosphocreatine biosynthetic process;0.00741253666959269!GO:0006603;phosphocreatine metabolic process;0.00741253666959269!GO:0030674;protein binding, bridging;0.00746467316291886!GO:0003702;RNA polymerase II transcription factor activity;0.00746467316291886!GO:0046930;pore complex;0.00747098814890144!GO:0030041;actin filament polymerization;0.00771664802131058!GO:0004721;phosphoprotein phosphatase activity;0.00787460122207146!GO:0005977;glycogen metabolic process;0.00799187482840977!GO:0009967;positive regulation of signal transduction;0.00807702930760847!GO:0030518;steroid hormone receptor signaling pathway;0.00819319973601666!GO:0030695;GTPase regulator activity;0.00835896325213433!GO:0016787;hydrolase activity;0.00851992090704095!GO:0005862;muscle thin filament tropomyosin;0.00861421765814035!GO:0022402;cell cycle process;0.00863693918525746!GO:0008139;nuclear localization sequence binding;0.00867877443108426!GO:0008287;protein serine/threonine phosphatase complex;0.00869452747842066!GO:0006402;mRNA catabolic process;0.009108970242867!GO:0044420;extracellular matrix part;0.00953789155629634!GO:0008234;cysteine-type peptidase activity;0.00953789155629634!GO:0030100;regulation of endocytosis;0.00969610053987855!GO:0051262;protein tetramerization;0.00969725604498561!GO:0006891;intra-Golgi vesicle-mediated transport;0.00994861444547214!GO:0043488;regulation of mRNA stability;0.0101352142740818!GO:0043487;regulation of RNA stability;0.0101352142740818!GO:0006892;post-Golgi vesicle-mediated transport;0.0101828864643365!GO:0004601;peroxidase activity;0.0103090885846841!GO:0016684;oxidoreductase activity, acting on peroxide as acceptor;0.0103090885846841!GO:0051252;regulation of RNA metabolic process;0.0104488609639442!GO:0006693;prostaglandin metabolic process;0.0105785771183924!GO:0006692;prostanoid metabolic process;0.0105785771183924!GO:0033116;ER-Golgi intermediate compartment membrane;0.0105869223660403!GO:0005813;centrosome;0.0107624398991807!GO:0008250;oligosaccharyl transferase complex;0.010781308560649!GO:0019902;phosphatase binding;0.0108164267398183!GO:0042805;actinin binding;0.0108164267398183!GO:0017022;myosin binding;0.0109846565451996!GO:0048468;cell development;0.0112520423150729!GO:0001725;stress fiber;0.0113101102327651!GO:0032432;actin filament bundle;0.0113101102327651!GO:0016126;sterol biosynthetic process;0.0113850403792265!GO:0008286;insulin receptor signaling pathway;0.0114584324219207!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0115501688239827!GO:0043492;ATPase activity, coupled to movement of substances;0.0115896000996294!GO:0051049;regulation of transport;0.0117663670365565!GO:0060090;molecular adaptor activity;0.0118315033248546!GO:0019904;protein domain specific binding;0.0119248162000008!GO:0030134;ER to Golgi transport vesicle;0.0119804809270541!GO:0008186;RNA-dependent ATPase activity;0.0122807201666216!GO:0030660;Golgi-associated vesicle membrane;0.0123742584422645!GO:0043681;protein import into mitochondrion;0.0124785194531696!GO:0051168;nuclear export;0.0127164587940824!GO:0043034;costamere;0.013102385732539!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0132074657336988!GO:0030127;COPII vesicle coat;0.0132753967520314!GO:0012507;ER to Golgi transport vesicle membrane;0.0132753967520314!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0138934046427968!GO:0045947;negative regulation of translational initiation;0.0138934046427968!GO:0009893;positive regulation of metabolic process;0.0140317608589134!GO:0007050;cell cycle arrest;0.0140926925119883!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0142104550238945!GO:0005665;DNA-directed RNA polymerase II, core complex;0.014352029181312!GO:0000785;chromatin;0.0146174855473522!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0151507878661523!GO:0045792;negative regulation of cell size;0.0153463307095658!GO:0030663;COPI coated vesicle membrane;0.015487039016437!GO:0030126;COPI vesicle coat;0.015487039016437!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0157559036104281!GO:0048500;signal recognition particle;0.0157620132400159!GO:0016584;nucleosome positioning;0.0157656597359227!GO:0019208;phosphatase regulator activity;0.0162367817264666!GO:0015631;tubulin binding;0.0163949485915968!GO:0035035;histone acetyltransferase binding;0.0165476957821175!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0165958926347602!GO:0017166;vinculin binding;0.0167277363334965!GO:0004674;protein serine/threonine kinase activity;0.0167583213104449!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.016867352958815!GO:0051146;striated muscle cell differentiation;0.0170554374959213!GO:0005869;dynactin complex;0.0172042695052433!GO:0006334;nucleosome assembly;0.0172082831140458!GO:0009719;response to endogenous stimulus;0.0173685348891965!GO:0030308;negative regulation of cell growth;0.0183647513469123!GO:0016072;rRNA metabolic process;0.0187515275231845!GO:0008654;phospholipid biosynthetic process;0.0187763324075054!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0198876158069408!GO:0006073;glucan metabolic process;0.0198876158069408!GO:0006401;RNA catabolic process;0.0200055097803757!GO:0004197;cysteine-type endopeptidase activity;0.0201182427233479!GO:0048741;skeletal muscle fiber development;0.0201182427233479!GO:0048747;muscle fiber development;0.0201182427233479!GO:0004576;oligosaccharyl transferase activity;0.0202679893125532!GO:0006364;rRNA processing;0.0205314164379176!GO:0022415;viral reproductive process;0.0205314164379176!GO:0019318;hexose metabolic process;0.0209239175886573!GO:0008047;enzyme activator activity;0.0209239175886573!GO:0005583;fibrillar collagen;0.0209465665665645!GO:0030521;androgen receptor signaling pathway;0.0211678324180069!GO:0051540;metal cluster binding;0.0211678324180069!GO:0051536;iron-sulfur cluster binding;0.0211678324180069!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0213288983979779!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0219009292250378!GO:0044430;cytoskeletal part;0.022121656555701!GO:0050811;GABA receptor binding;0.0238025743209619!GO:0045098;type III intermediate filament;0.0238137873079017!GO:0040008;regulation of growth;0.0244953015875563!GO:0031902;late endosome membrane;0.0247891275206079!GO:0042542;response to hydrogen peroxide;0.0249241226039625!GO:0043065;positive regulation of apoptosis;0.0249241226039625!GO:0051101;regulation of DNA binding;0.0254347359583388!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0258042765655018!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0262953098190845!GO:0006937;regulation of muscle contraction;0.0265063465279912!GO:0007009;plasma membrane organization and biogenesis;0.0265256869698838!GO:0008629;induction of apoptosis by intracellular signals;0.0279588311862236!GO:0030140;trans-Golgi network transport vesicle;0.0280007034064348!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0287395856168488!GO:0006417;regulation of translation;0.0289687250000714!GO:0030125;clathrin vesicle coat;0.0289687250000714!GO:0030665;clathrin coated vesicle membrane;0.0289687250000714!GO:0033018;sarcoplasmic reticulum lumen;0.0289762705296827!GO:0004004;ATP-dependent RNA helicase activity;0.0289762705296827!GO:0016311;dephosphorylation;0.0289762705296827!GO:0005518;collagen binding;0.0291196700653561!GO:0048487;beta-tubulin binding;0.0293147334233982!GO:0042692;muscle cell differentiation;0.029454054125327!GO:0051539;4 iron, 4 sulfur cluster binding;0.0297691009547764!GO:0005790;smooth endoplasmic reticulum;0.0303697462566492!GO:0031143;pseudopodium;0.0303697462566492!GO:0019395;fatty acid oxidation;0.0304937022743993!GO:0051289;protein homotetramerization;0.0305898321886123!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0305898321886123!GO:0045047;protein targeting to ER;0.0305898321886123!GO:0031497;chromatin assembly;0.030726064582164!GO:0048037;cofactor binding;0.0310627269053872!GO:0012506;vesicle membrane;0.0313758427140691!GO:0005925;focal adhesion;0.0317455840798779!GO:0008601;protein phosphatase type 2A regulator activity;0.0317870032999745!GO:0000059;protein import into nucleus, docking;0.031862243661363!GO:0006695;cholesterol biosynthetic process;0.0318706464580844!GO:0048041;focal adhesion formation;0.0318706464580844!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0318706464580844!GO:0010257;NADH dehydrogenase complex assembly;0.0318706464580844!GO:0033108;mitochondrial respiratory chain complex assembly;0.0318706464580844!GO:0003729;mRNA binding;0.0320542943596245!GO:0048154;S100 beta binding;0.0320542943596245!GO:0008147;structural constituent of bone;0.0323789971072547!GO:0005815;microtubule organizing center;0.0324560899975742!GO:0006399;tRNA metabolic process;0.0326119046347646!GO:0005996;monosaccharide metabolic process;0.032833208476233!GO:0006376;mRNA splice site selection;0.0331078769206148!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0331078769206148!GO:0046848;hydroxyapatite binding;0.0332934546224288!GO:0006006;glucose metabolic process;0.0335022960299844!GO:0006839;mitochondrial transport;0.0335602039846656!GO:0048660;regulation of smooth muscle cell proliferation;0.0340816222060002!GO:0006778;porphyrin metabolic process;0.0343076199824722!GO:0033013;tetrapyrrole metabolic process;0.0343076199824722!GO:0004111;creatine kinase activity;0.0348269727666517!GO:0051261;protein depolymerization;0.035779113689232!GO:0043068;positive regulation of programmed cell death;0.0358232925979684!GO:0030522;intracellular receptor-mediated signaling pathway;0.0369602053879431!GO:0050681;androgen receptor binding;0.0369695455190819!GO:0030137;COPI-coated vesicle;0.0371094294125675!GO:0015036;disulfide oxidoreductase activity;0.037118809591932!GO:0043022;ribosome binding;0.0372015309689679!GO:0019888;protein phosphatase regulator activity;0.0378338976162414!GO:0006942;regulation of striated muscle contraction;0.0378830759467371!GO:0055092;sterol homeostasis;0.0386966656635185!GO:0042632;cholesterol homeostasis;0.0386966656635185!GO:0005100;Rho GTPase activator activity;0.0401290511509342!GO:0051393;alpha-actinin binding;0.0401755706934988!GO:0048306;calcium-dependent protein binding;0.040251912261927!GO:0008312;7S RNA binding;0.0406548271079896!GO:0004364;glutathione transferase activity;0.0409217324074188!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0409217324074188!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0412772372480584!GO:0001516;prostaglandin biosynthetic process;0.041590744438169!GO:0046457;prostanoid biosynthetic process;0.041590744438169!GO:0006007;glucose catabolic process;0.041590744438169!GO:0006779;porphyrin biosynthetic process;0.041590744438169!GO:0033014;tetrapyrrole biosynthetic process;0.041590744438169!GO:0030216;keratinocyte differentiation;0.0417409911366221!GO:0005626;insoluble fraction;0.0417409911366221!GO:0045113;regulation of integrin biosynthetic process;0.0421025713306188!GO:0045112;integrin biosynthetic process;0.0421025713306188!GO:0007015;actin filament organization;0.0421062934930638!GO:0006112;energy reserve metabolic process;0.0428597789531717!GO:0000159;protein phosphatase type 2A complex;0.042863104756302!GO:0045045;secretory pathway;0.0429148109905209!GO:0009266;response to temperature stimulus;0.0429276398028536!GO:0048659;smooth muscle cell proliferation;0.0433065065133163!GO:0031326;regulation of cellular biosynthetic process;0.0435701560151!GO:0031529;ruffle organization and biogenesis;0.0443084626615993!GO:0046822;regulation of nucleocytoplasmic transport;0.0443328834502806!GO:0014866;skeletal myofibril assembly;0.0443328834502806!GO:0030659;cytoplasmic vesicle membrane;0.0443328834502806!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0454864901168711!GO:0051248;negative regulation of protein metabolic process;0.0455921371328337!GO:0006650;glycerophospholipid metabolic process;0.0459381200241313!GO:0031901;early endosome membrane;0.0461579397138036!GO:0065009;regulation of a molecular function;0.0461743755764093!GO:0042803;protein homodimerization activity;0.0475381597021548!GO:0005200;structural constituent of cytoskeleton;0.0476904817309681!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0479700896391831!GO:0004784;superoxide dismutase activity;0.0479700896391831!GO:0008180;signalosome;0.0499683673213171 | |||
|sample_id=10209 | |sample_id=10209 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=MEF2{A,B,C,D}:5.61196180699;NR1H4:3.96404242888;TBP:3.7962538106;NR5A1,2:3.28126490671;TBX4,5:2.86280608259;MYOD1:2.84009449375;TFCP2:2.72264858926;ESR1:2.65812466028;NFE2L1:2.56703412453;HMX1:2.54883574426;TAL1_TCF{3,4,12}:2.50799343005;RXRA_VDR{dimer}:2.33600033877;TLX2:2.31562146086;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.26102509303;TGIF1:2.1930115062;SNAI1..3:2.18957137949;TFAP2{A,C}:2.10926322123;TFAP4:2.10370630453;LMO2:2.08932543912;HAND1,2:2.04620125224;ESRRA:1.95584912042;GLI1..3:1.80931942402;SPZ1:1.80147771441;SRF:1.78623230924;TLX1..3_NFIC{dimer}:1.78035407765;NR6A1:1.76145061219;ZEB1:1.73516845693;SMAD1..7,9:1.71767936149;GCM1,2:1.70999634925;RBPJ:1.64272150846;MAZ:1.63223461973;FOXO1,3,4:1.61675297774;FOXL1:1.59841160708;ZIC1..3:1.58871034931;ZNF148:1.57623217605;AR:1.51613125847;SP1:1.49074892653;NHLH1,2:1.43170050136;PDX1:1.42700844051;HOX{A4,D4}:1.42374584659;SOX5:1.38128459689;RFX2..5_RFXANK_RFXAP:1.36298693989;PAX6:1.32987745865;IRF7:1.26819340116;MYFfamily:1.22285547815;PATZ1:1.22079414847;KLF4:1.2185733849;MAFB:1.17623070794;MYBL2:1.16268079286;ZNF423:1.15843810524;MTF1:1.13279430153;FOX{D1,D2}:1.12017998003;NFATC1..3:1.0889251308;GATA4:1.08435806295;HIC1:1.08307177142;T:1.07585362086;GTF2A1,2:1.06929396392;NKX2-2,8:1.02287284555;RREB1:0.980064876786;NFIX:0.972760135995;ZNF384:0.937080348026;ATF2:0.902737267147;PPARG:0.865467502179;GTF2I:0.856499222402;TP53:0.853238074234;NKX6-1,2:0.780701797713;BPTF:0.752540004186;ZNF238:0.75097613257;TEAD1:0.741281271173;IKZF2:0.732084399857;ATF6:0.728367465419;FOX{F1,F2,J1}:0.715453116023;HES1:0.711964508576;FOXA2:0.693917357743;HSF1,2:0.674232619786;FOXN1:0.668005246931;UFEwm:0.650014169425;NKX3-2:0.648794970108;MED-1{core}:0.645292236866;XCPE1{core}:0.615359548554;PAX5:0.594099197192;XBP1:0.580444743003;CUX2:0.539030185726;MZF1:0.538059692689;NKX2-3_NKX2-5:0.535618702664;POU6F1:0.526745612448;ALX1:0.509456148996;EP300:0.508977836827;ALX4:0.467487903149;RXR{A,B,G}:0.465975855766;YY1:0.46596276337;NANOG:0.401403404918;REST:0.40114374;EBF1:0.385396216669;MTE{core}:0.380226898107;GATA6:0.379274330416;TFAP2B:0.372803823707;ETS1,2:0.355683348095;RFX1:0.339068793515;IKZF1:0.300051732283;CDC5L:0.278118194807;ARID5B:0.263967235278;POU2F1..3:0.254954071782;EVI1:0.186782783296;POU5F1:0.175259293733;PITX1..3:0.164729773223;PAX1,9:0.146414541416;PBX1:0.146349368171;EGR1..3:0.104746118632;JUN:0.0832958308451;IRF1,2:0.0645077977105;HNF4A_NR2F1,2:0.0607134404148;SOX{8,9,10}:0.0556137766978;FOXQ1:0.0484390902421;HBP1_HMGB_SSRP1_UBTF:0.0454143653537;GFI1B:0.0350801980635;ELF1,2,4:0.0334135408275;STAT5{A,B}:0.0328965524019;DMAP1_NCOR{1,2}_SMARC:0.0175184562831;SPI1:0.0137244080886;POU3F1..4:-0.00230503336224;ATF4:-0.042753527621;PRDM1:-0.0431704842127;CDX1,2,4:-0.0436305951378;ZFP161:-0.051886519546;FOXP1:-0.0605995041719;SREBF1,2:-0.0713741267115;BREu{core}:-0.0842191218801;NR3C1:-0.088720111794;STAT2,4,6:-0.0989056898655;CEBPA,B_DDIT3:-0.108247837143;ZNF143:-0.123842677557;SPIB:-0.126483237775;LEF1_TCF7_TCF7L1,2:-0.154839364061;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.157322148287;GFI1:-0.179046147143;STAT1,3:-0.188191435788;EN1,2:-0.199398992816;NFE2L2:-0.21081965604;POU1F1:-0.217296449432;FOSL2:-0.227724355285;FOXM1:-0.228877191976;ZBTB6:-0.247151791775;NKX2-1,4:-0.293630275924;NFY{A,B,C}:-0.299023705942;TOPORS:-0.334712631348;PAX3,7:-0.377526326881;NFIL3:-0.418428709331;NFE2:-0.418992112021;PAX2:-0.423861936178;LHX3,4:-0.444452487613;FOXP3:-0.457761420478;SOX17:-0.48258330601;ATF5_CREB3:-0.502076143428;NFKB1_REL_RELA:-0.525840554635;FOS_FOS{B,L1}_JUN{B,D}:-0.525867686029;RUNX1..3:-0.53742729271;SOX2:-0.569798789477;E2F1..5:-0.582414761521;HLF:-0.631778215635;ZBTB16:-0.63235240239;HNF1A:-0.63677402647;NANOG{mouse}:-0.678474987927;GZF1:-0.722583748313;NRF1:-0.724758427118;bHLH_family:-0.799177295818;BACH2:-0.819656796534;AIRE:-0.824484164744;NKX3-1:-0.885108538871;CREB1:-0.91959773943;RORA:-0.934143958107;HOX{A6,A7,B6,B7}:-0.937979666827;OCT4_SOX2{dimer}:-0.961344324723;VSX1,2:-1.09474625664;TEF:-1.16644783584;CRX:-1.17019351543;TFDP1:-1.27950503847;HMGA1,2:-1.29665469638;DBP:-1.29997547187;ONECUT1,2:-1.3488522013;MYB:-1.38599907877;HIF1A:-1.45520774942;FOX{I1,J2}:-1.48106638637;ELK1,4_GABP{A,B1}:-1.49762547859;HOX{A5,B5}:-1.51611493142;AHR_ARNT_ARNT2:-1.66244304754;PAX4:-1.68873363185;PRRX1,2:-1.72881840546;HOXA9_MEIS1:-1.73385942474;FOXD3:-1.85081081981;ADNP_IRX_SIX_ZHX:-1.92391232388;PAX8:-3.18167568425 | |top_motifs=MEF2{A,B,C,D}:5.61196180699;NR1H4:3.96404242888;TBP:3.7962538106;NR5A1,2:3.28126490671;TBX4,5:2.86280608259;MYOD1:2.84009449375;TFCP2:2.72264858926;ESR1:2.65812466028;NFE2L1:2.56703412453;HMX1:2.54883574426;TAL1_TCF{3,4,12}:2.50799343005;RXRA_VDR{dimer}:2.33600033877;TLX2:2.31562146086;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.26102509303;TGIF1:2.1930115062;SNAI1..3:2.18957137949;TFAP2{A,C}:2.10926322123;TFAP4:2.10370630453;LMO2:2.08932543912;HAND1,2:2.04620125224;ESRRA:1.95584912042;GLI1..3:1.80931942402;SPZ1:1.80147771441;SRF:1.78623230924;TLX1..3_NFIC{dimer}:1.78035407765;NR6A1:1.76145061219;ZEB1:1.73516845693;SMAD1..7,9:1.71767936149;GCM1,2:1.70999634925;RBPJ:1.64272150846;MAZ:1.63223461973;FOXO1,3,4:1.61675297774;FOXL1:1.59841160708;ZIC1..3:1.58871034931;ZNF148:1.57623217605;AR:1.51613125847;SP1:1.49074892653;NHLH1,2:1.43170050136;PDX1:1.42700844051;HOX{A4,D4}:1.42374584659;SOX5:1.38128459689;RFX2..5_RFXANK_RFXAP:1.36298693989;PAX6:1.32987745865;IRF7:1.26819340116;MYFfamily:1.22285547815;PATZ1:1.22079414847;KLF4:1.2185733849;MAFB:1.17623070794;MYBL2:1.16268079286;ZNF423:1.15843810524;MTF1:1.13279430153;FOX{D1,D2}:1.12017998003;NFATC1..3:1.0889251308;GATA4:1.08435806295;HIC1:1.08307177142;T:1.07585362086;GTF2A1,2:1.06929396392;NKX2-2,8:1.02287284555;RREB1:0.980064876786;NFIX:0.972760135995;ZNF384:0.937080348026;ATF2:0.902737267147;PPARG:0.865467502179;GTF2I:0.856499222402;TP53:0.853238074234;NKX6-1,2:0.780701797713;BPTF:0.752540004186;ZNF238:0.75097613257;TEAD1:0.741281271173;IKZF2:0.732084399857;ATF6:0.728367465419;FOX{F1,F2,J1}:0.715453116023;HES1:0.711964508576;FOXA2:0.693917357743;HSF1,2:0.674232619786;FOXN1:0.668005246931;UFEwm:0.650014169425;NKX3-2:0.648794970108;MED-1{core}:0.645292236866;XCPE1{core}:0.615359548554;PAX5:0.594099197192;XBP1:0.580444743003;CUX2:0.539030185726;MZF1:0.538059692689;NKX2-3_NKX2-5:0.535618702664;POU6F1:0.526745612448;ALX1:0.509456148996;EP300:0.508977836827;ALX4:0.467487903149;RXR{A,B,G}:0.465975855766;YY1:0.46596276337;NANOG:0.401403404918;REST:0.40114374;EBF1:0.385396216669;MTE{core}:0.380226898107;GATA6:0.379274330416;TFAP2B:0.372803823707;ETS1,2:0.355683348095;RFX1:0.339068793515;IKZF1:0.300051732283;CDC5L:0.278118194807;ARID5B:0.263967235278;POU2F1..3:0.254954071782;EVI1:0.186782783296;POU5F1:0.175259293733;PITX1..3:0.164729773223;PAX1,9:0.146414541416;PBX1:0.146349368171;EGR1..3:0.104746118632;JUN:0.0832958308451;IRF1,2:0.0645077977105;HNF4A_NR2F1,2:0.0607134404148;SOX{8,9,10}:0.0556137766978;FOXQ1:0.0484390902421;HBP1_HMGB_SSRP1_UBTF:0.0454143653537;GFI1B:0.0350801980635;ELF1,2,4:0.0334135408275;STAT5{A,B}:0.0328965524019;DMAP1_NCOR{1,2}_SMARC:0.0175184562831;SPI1:0.0137244080886;POU3F1..4:-0.00230503336224;ATF4:-0.042753527621;PRDM1:-0.0431704842127;CDX1,2,4:-0.0436305951378;ZFP161:-0.051886519546;FOXP1:-0.0605995041719;SREBF1,2:-0.0713741267115;BREu{core}:-0.0842191218801;NR3C1:-0.088720111794;STAT2,4,6:-0.0989056898655;CEBPA,B_DDIT3:-0.108247837143;ZNF143:-0.123842677557;SPIB:-0.126483237775;LEF1_TCF7_TCF7L1,2:-0.154839364061;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.157322148287;GFI1:-0.179046147143;STAT1,3:-0.188191435788;EN1,2:-0.199398992816;NFE2L2:-0.21081965604;POU1F1:-0.217296449432;FOSL2:-0.227724355285;FOXM1:-0.228877191976;ZBTB6:-0.247151791775;NKX2-1,4:-0.293630275924;NFY{A,B,C}:-0.299023705942;TOPORS:-0.334712631348;PAX3,7:-0.377526326881;NFIL3:-0.418428709331;NFE2:-0.418992112021;PAX2:-0.423861936178;LHX3,4:-0.444452487613;FOXP3:-0.457761420478;SOX17:-0.48258330601;ATF5_CREB3:-0.502076143428;NFKB1_REL_RELA:-0.525840554635;FOS_FOS{B,L1}_JUN{B,D}:-0.525867686029;RUNX1..3:-0.53742729271;SOX2:-0.569798789477;E2F1..5:-0.582414761521;HLF:-0.631778215635;ZBTB16:-0.63235240239;HNF1A:-0.63677402647;NANOG{mouse}:-0.678474987927;GZF1:-0.722583748313;NRF1:-0.724758427118;bHLH_family:-0.799177295818;BACH2:-0.819656796534;AIRE:-0.824484164744;NKX3-1:-0.885108538871;CREB1:-0.91959773943;RORA:-0.934143958107;HOX{A6,A7,B6,B7}:-0.937979666827;OCT4_SOX2{dimer}:-0.961344324723;VSX1,2:-1.09474625664;TEF:-1.16644783584;CRX:-1.17019351543;TFDP1:-1.27950503847;HMGA1,2:-1.29665469638;DBP:-1.29997547187;ONECUT1,2:-1.3488522013;MYB:-1.38599907877;HIF1A:-1.45520774942;FOX{I1,J2}:-1.48106638637;ELK1,4_GABP{A,B1}:-1.49762547859;HOX{A5,B5}:-1.51611493142;AHR_ARNT_ARNT2:-1.66244304754;PAX4:-1.68873363185;PRRX1,2:-1.72881840546;HOXA9_MEIS1:-1.73385942474;FOXD3:-1.85081081981;ADNP_IRX_SIX_ZHX:-1.92391232388;PAX8:-3.18167568425 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10209-103G2;search_select_hide=table117:FF:10209-103G2 | |||
}} | }} | ||
Latest revision as of 13:56, 3 June 2020
| Name: | throat, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12858 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12858
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12858
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.811 |
| 10 | 10 | 0.106 |
| 100 | 100 | 0.329 |
| 101 | 101 | 0.111 |
| 102 | 102 | 0.833 |
| 103 | 103 | 0.4 |
| 104 | 104 | 0.713 |
| 105 | 105 | 0.718 |
| 106 | 106 | 0.423 |
| 107 | 107 | 0.0831 |
| 108 | 108 | 0.218 |
| 109 | 109 | 0.828 |
| 11 | 11 | 0.84 |
| 110 | 110 | 0.689 |
| 111 | 111 | 0.46 |
| 112 | 112 | 0.0793 |
| 113 | 113 | 0.898 |
| 114 | 114 | 0.171 |
| 115 | 115 | 0.0627 |
| 116 | 116 | 0.468 |
| 117 | 117 | 0.192 |
| 118 | 118 | 0.0296 |
| 119 | 119 | 0.282 |
| 12 | 12 | 0.774 |
| 120 | 120 | 0.716 |
| 121 | 121 | 0.518 |
| 122 | 122 | 0.391 |
| 123 | 123 | 0.019 |
| 124 | 124 | 0.323 |
| 125 | 125 | 0.828 |
| 126 | 126 | 0.138 |
| 127 | 127 | 0.758 |
| 128 | 128 | 0.189 |
| 129 | 129 | 0.368 |
| 13 | 13 | 0.375 |
| 130 | 130 | 0.745 |
| 131 | 131 | 0.408 |
| 132 | 132 | 0.043 |
| 133 | 133 | 1.0711e-4 |
| 134 | 134 | 0.0048 |
| 135 | 135 | 0.0636 |
| 136 | 136 | 0.654 |
| 137 | 137 | 0.326 |
| 138 | 138 | 0.512 |
| 139 | 139 | 0.419 |
| 14 | 14 | 0.505 |
| 140 | 140 | 0.888 |
| 141 | 141 | 0.964 |
| 142 | 142 | 0.567 |
| 143 | 143 | 0.00506 |
| 144 | 144 | 0.671 |
| 145 | 145 | 0.952 |
| 146 | 146 | 0.686 |
| 147 | 147 | 0.0203 |
| 148 | 148 | 0.906 |
| 149 | 149 | 0.0124 |
| 15 | 15 | 0.368 |
| 150 | 150 | 0.884 |
| 151 | 151 | 0.406 |
| 152 | 152 | 0.102 |
| 153 | 153 | 0.485 |
| 154 | 154 | 0.64 |
| 155 | 155 | 0.611 |
| 156 | 156 | 0.111 |
| 157 | 157 | 0.907 |
| 158 | 158 | 0.0762 |
| 159 | 159 | 0.841 |
| 16 | 16 | 0.346 |
| 160 | 160 | 0.705 |
| 161 | 161 | 0.692 |
| 162 | 162 | 0.503 |
| 163 | 163 | 0.106 |
| 164 | 164 | 0.197 |
| 165 | 165 | 0.0359 |
| 166 | 166 | 0.0884 |
| 167 | 167 | 0.0614 |
| 168 | 168 | 0.144 |
| 169 | 169 | 0.0481 |
| 17 | 17 | 0.879 |
| 18 | 18 | 0.0812 |
| 19 | 19 | 0.126 |
| 2 | 2 | 0.00823 |
| 20 | 20 | 0.0546 |
| 21 | 21 | 0.643 |
| 22 | 22 | 0.139 |
| 23 | 23 | 0.331 |
| 24 | 24 | 0.567 |
| 25 | 25 | 0.835 |
| 26 | 26 | 0.536 |
| 27 | 27 | 0.398 |
| 28 | 28 | 0.974 |
| 29 | 29 | 0.184 |
| 3 | 3 | 0.78 |
| 30 | 30 | 0.00751 |
| 31 | 31 | 0.766 |
| 32 | 32 | 0.226 |
| 33 | 33 | 0.506 |
| 34 | 34 | 0.278 |
| 35 | 35 | 0.597 |
| 36 | 36 | 0.0126 |
| 37 | 37 | 0.941 |
| 38 | 38 | 0.779 |
| 39 | 39 | 0.199 |
| 4 | 4 | 0.655 |
| 40 | 40 | 0.234 |
| 41 | 41 | 0.481 |
| 42 | 42 | 0.461 |
| 43 | 43 | 0.672 |
| 44 | 44 | 0.0312 |
| 45 | 45 | 0.027 |
| 46 | 46 | 0.84 |
| 47 | 47 | 0.571 |
| 48 | 48 | 0.579 |
| 49 | 49 | 0.435 |
| 5 | 5 | 0.644 |
| 50 | 50 | 0.387 |
| 51 | 51 | 0.703 |
| 52 | 52 | 0.069 |
| 53 | 53 | 0.683 |
| 54 | 54 | 0.924 |
| 55 | 55 | 0.978 |
| 56 | 56 | 0.889 |
| 57 | 57 | 0.383 |
| 58 | 58 | 0.966 |
| 59 | 59 | 0.16 |
| 6 | 6 | 0.728 |
| 60 | 60 | 0.211 |
| 61 | 61 | 0.612 |
| 62 | 62 | 0.805 |
| 63 | 63 | 0.324 |
| 64 | 64 | 0.827 |
| 65 | 65 | 0.479 |
| 66 | 66 | 0.00837 |
| 67 | 67 | 0.241 |
| 68 | 68 | 0.23 |
| 69 | 69 | 0.379 |
| 7 | 7 | 0.682 |
| 70 | 70 | 0.665 |
| 71 | 71 | 0.363 |
| 72 | 72 | 0.637 |
| 73 | 73 | 0.573 |
| 74 | 74 | 0.126 |
| 75 | 75 | 0.301 |
| 76 | 76 | 0.0105 |
| 77 | 77 | 0.0105 |
| 78 | 78 | 0.906 |
| 79 | 79 | 0.472 |
| 8 | 8 | 0.931 |
| 80 | 80 | 0.638 |
| 81 | 81 | 0.696 |
| 82 | 82 | 0.417 |
| 83 | 83 | 0.719 |
| 84 | 84 | 0.906 |
| 85 | 85 | 0.112 |
| 86 | 86 | 0.714 |
| 87 | 87 | 0.847 |
| 88 | 88 | 0.63 |
| 89 | 89 | 0.0956 |
| 9 | 9 | 0.459 |
| 90 | 90 | 0.0659 |
| 91 | 91 | 0.0976 |
| 92 | 92 | 0.407 |
| 93 | 93 | 0.95 |
| 94 | 94 | 0.0791 |
| 95 | 95 | 0.395 |
| 96 | 96 | 0.64 |
| 97 | 97 | 0.813 |
| 98 | 98 | 0.999 |
| 99 | 99 | 0.112 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12858
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010209 human throat - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000341 (throat)
0000974 (neck)
0000479 (tissue)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0000153 (anterior region of body)
0007811 (craniocervical region)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010209 (human throat - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
