FFCP PHASE1:Mm9::chr10:18728179..18728200,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21929 | |EntrezGene=21929 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=450bp_to_ENSMUST00000154749_5end | |association_with_transcript=450bp_to_ENSMUST00000154749_5end | ||
|cluster_id=chr10:18728179..18728200,- | |||
|description=CAGE_peak_5_at_Tnfaip3_5end | |description=CAGE_peak_5_at_Tnfaip3_5end | ||
|id=chr10:18728179..18728200,- | |id=chr10:18728179..18728200,- | ||
|ontology_enrichment_celltype=CL:0002563!5.05e-12!9;CL:0002251!5.05e-12!9;CL:0000239!3.20e-09!6;CL:0000677!3.20e-09!6;CL:0000212!3.20e-09!6;CL:0000584!3.20e-09!6;CL:0000075!1.03e-07!7;CL:0002076!1.43e-07!15;CL:0000066!8.35e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.43e-19,6;CL:0000677,8.43e-19,6;CL:0000584,8.43e-19,6;CL:0002563,3.01e-16,9;CL:0002251,3.01e-16,9;CL:0000075,5.03e-16,7;CL:0000066,6.91e-11,25;CL:0000682,1.96e-10,3;CL:0002076,2.31e-09,15;CL:0000223,8.84e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.12e-28!59;UBERON:0000160!2.69e-27!43;UBERON:0000344!1.02e-19!15;UBERON:0001242!3.00e-17!13;UBERON:0000060!3.00e-17!13;UBERON:0001262!3.00e-17!13;UBERON:0004786!3.00e-17!13;UBERON:0004923!1.95e-13!24;UBERON:0003350!5.05e-12!9;UBERON:0004808!5.05e-12!9;UBERON:0001277!5.05e-12!9;UBERON:0004119!5.48e-11!130;UBERON:0000925!5.48e-11!130;UBERON:0006595!5.48e-11!130;UBERON:0001007!1.11e-10!128;UBERON:0001555!1.11e-10!128;UBERON:0007026!1.11e-10!128;UBERON:0004921!2.10e-09!126;UBERON:0004185!2.10e-09!126;UBERON:0000485!2.20e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.15e-51,31;UBERON:0000344,5.56e-33,15;UBERON:0005409,1.74e-32,47;UBERON:0001242,1.59e-27,13;UBERON:0001262,1.59e-27,13;UBERON:0004786,1.59e-27,13;UBERON:0004923,1.35e-19,24;UBERON:0003350,3.01e-16,9;UBERON:0004808,3.01e-16,9;UBERON:0001277,3.01e-16,9;UBERON:0000485,4.04e-13,11;UBERON:0001007,9.80e-13,116;UBERON:0001555,9.80e-13,116;UBERON:0007026,9.80e-13,116;UBERON:0002108,1.19e-12,4;UBERON:0004119,1.97e-12,118;UBERON:0000925,1.97e-12,118;UBERON:0006595,1.97e-12,118;UBERON:0004921,1.45e-10,114;UBERON:0000331,2.80e-10,3;UBERON:0002116,2.80e-10,3;UBERON:0001204,2.80e-10,3;UBERON:0001168,2.80e-10,3;UBERON:0001155,5.13e-07,2;UBERON:0001962,5.13e-07,2;UBERON:0001961,5.13e-07,2;UBERON:0001744,5.13e-07,2;UBERON:0000059,5.13e-07,2 | |||
|phase1_expression=0,9.77131141390211,4.54999239389536,15.4256747766483,12.0214975187123,5.87577451691614,5.60670337429262,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,5.96464130774642,4.59385571292016,15.5074318617267,9.9116767035509,7.41091335879858,9.57714493087737,6.43018480900384,0,0,0,0.288851619751275,0.997407872150954,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0.253359865475099,0,2.16949371466214,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,3.72783522436244,0,0,7.15279754584056,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,3.17340679996253,0.213288250535234,0,0.128867461322093,1.21010114774006,2.89091456998331,3.23383564391351,4.2707615539006,1.15289268306808,1.50801125280162,0.994782360205754,0.779856348476481,8.08937467788799,6.48414149624083,6.96994456390285,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.674321731924103,0.0826534557253359,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0,0.384150914429216,0.17230640686684,0,0.347652977834566,0,0,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.507687647350059,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.464810523557898,0,0,0,0,0,0,0 | |phase1_expression=0,9.77131141390211,4.54999239389536,15.4256747766483,12.0214975187123,5.87577451691614,5.60670337429262,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,5.96464130774642,4.59385571292016,15.5074318617267,9.9116767035509,7.41091335879858,9.57714493087737,6.43018480900384,0,0,0,0.288851619751275,0.997407872150954,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0.253359865475099,0,2.16949371466214,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0,3.72783522436244,0,0,7.15279754584056,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,3.17340679996253,0.213288250535234,0,0.128867461322093,1.21010114774006,2.89091456998331,3.23383564391351,4.2707615539006,1.15289268306808,1.50801125280162,0.994782360205754,0.779856348476481,8.08937467788799,6.48414149624083,6.96994456390285,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.674321731924103,0.0826534557253359,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0,0,0.384150914429216,0.17230640686684,0,0.347652977834566,0,0,0,0,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.507687647350059,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.464810523557898,0,0,0,0,0,0,0 | ||
|short_description=p5@Tnfaip3 | |short_description=p5@Tnfaip3 | ||
}} | }} |
Latest revision as of 20:27, 25 September 2015
Short description: | p5@Tnfaip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tnfaip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 450bp_to_ENSMUST00000154749_5end |
EntrezGene: | Tnfaip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.43e-19 | 6 |
gut absorptive cell | 8.43e-19 | 6 |
enterocyte | 8.43e-19 | 6 |
intestinal epithelial cell | 3.01e-16 | 9 |
epithelial cell of alimentary canal | 3.01e-16 | 9 |
columnar/cuboidal epithelial cell | 5.03e-16 | 7 |
epithelial cell | 6.91e-11 | 25 |
M cell of gut | 1.96e-10 | 3 |
endo-epithelial cell | 2.31e-09 | 15 |
endodermal cell | 8.84e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.15e-51 | 31 |
mucosa | 5.56e-33 | 15 |
gastrointestinal system | 1.74e-32 | 47 |
intestinal mucosa | 1.59e-27 | 13 |
wall of intestine | 1.59e-27 | 13 |
gastrointestinal system mucosa | 1.59e-27 | 13 |
organ component layer | 1.35e-19 | 24 |
epithelium of mucosa | 3.01e-16 | 9 |
gastrointestinal system epithelium | 3.01e-16 | 9 |
intestinal epithelium | 3.01e-16 | 9 |
simple columnar epithelium | 4.04e-13 | 11 |
digestive system | 9.80e-13 | 116 |
digestive tract | 9.80e-13 | 116 |
primitive gut | 9.80e-13 | 116 |
small intestine | 1.19e-12 | 4 |
endoderm-derived structure | 1.97e-12 | 118 |
endoderm | 1.97e-12 | 118 |
presumptive endoderm | 1.97e-12 | 118 |
subdivision of digestive tract | 1.45e-10 | 114 |
ileal mucosa | 2.80e-10 | 3 |
ileum | 2.80e-10 | 3 |
mucosa of small intestine | 2.80e-10 | 3 |
wall of small intestine | 2.80e-10 | 3 |
colon | 5.13e-07 | 2 |
gut-associated lymphoid tissue | 5.13e-07 | 2 |
mucosa-associated lymphoid tissue | 5.13e-07 | 2 |
lymphoid tissue | 5.13e-07 | 2 |
large intestine | 5.13e-07 | 2 |