FFCP PHASE1:Hg19::chr10:91011525..91011541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3988 | |EntrezGene=3988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6617 | |HGNC=6617 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6K2 | |UniProt=F5H6K2 | ||
|association_with_transcript=0bp_to_ENST00000542307_5end | |association_with_transcript=0bp_to_ENST00000542307_5end | ||
|cluster_id=chr10:91011525..91011541,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_2_at_LIPA_5end | |description=CAGE_peak_2_at_LIPA_5end | ||
|id=chr10:91011525..91011541,- | |id=chr10:91011525..91011541,- | ||
|ontology_enrichment_celltype=CL:0002057!1.87e-15!42;CL:0002194!5.38e-15!63;CL:0000576!5.38e-15!63;CL:0000040!5.38e-15!63;CL:0000559!5.38e-15!63;CL:0002009!3.98e-14!65;CL:0000860!1.02e-13!45;CL:0000839!9.19e-12!70;CL:0000557!1.28e-11!71;CL:0000766!9.17e-10!76 | |ontology_enrichment_celltype=CL:0002057!1.87e-15!42;CL:0002194!5.38e-15!63;CL:0000576!5.38e-15!63;CL:0000040!5.38e-15!63;CL:0000559!5.38e-15!63;CL:0002009!3.98e-14!65;CL:0000860!1.02e-13!45;CL:0000839!9.19e-12!70;CL:0000557!1.28e-11!71;CL:0000766!9.17e-10!76 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.43e-13;39!CL:0000234;3.43e-13;39!CL:0000860;6.85e-12;33!CL:0002057;6.85e-12;33!CL:0000576;5.56e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.78e-19,48;CL:0000234,2.78e-19,48;CL:0002194,2.44e-17,59;CL:0000576,2.44e-17,59;CL:0000040,2.44e-17,59;CL:0000559,2.44e-17,59;CL:0002009,2.74e-16,61;CL:0000860,1.86e-15,42;CL:0002057,1.86e-15,42;CL:0000839,1.40e-13,66;CL:0000557,2.24e-13,67;CL:0000766,2.55e-11,72 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.69e-16!511;UBERON:0000467!2.07e-15!625;UBERON:0000480!4.94e-15!626;UBERON:0000468!5.47e-14!659;UBERON:0000923!1.31e-12!604;UBERON:0005291!1.31e-12!604;UBERON:0006598!1.31e-12!604;UBERON:0002532!1.31e-12!604;UBERON:0002050!1.89e-12!605;UBERON:0005423!1.89e-12!605;UBERON:0002390!3.05e-12!102;UBERON:0003061!3.05e-12!102;UBERON:0002193!2.62e-11!112;UBERON:0000922!2.69e-11!612;UBERON:0002204!1.36e-10!167;UBERON:0002371!1.92e-10!80;UBERON:0002405!3.56e-10!115;UBERON:0001474!3.68e-09!86;UBERON:0000479!1.17e-08!787;UBERON:0004765!1.60e-08!101;UBERON:0001434!1.60e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,3.37e-15,564;UBERON:0000923,1.32e-14,560;UBERON:0010316,1.32e-14,560;UBERON:0005291,1.32e-14,560;UBERON:0006598,1.32e-14,560;UBERON:0010317,1.32e-14,560;UBERON:0002532,1.32e-14,560;UBERON:0002390,1.16e-13,98;UBERON:0003061,1.16e-13,98;UBERON:0005423,2.53e-13,581;UBERON:0002193,1.42e-12,108;UBERON:0002371,6.15e-12,76;UBERON:0002204,2.73e-11,167;UBERON:0002405,3.91e-11,93;UBERON:0000922,4.06e-11,592;UBERON:0001474,1.86e-10,82;UBERON:0004765,3.02e-10,90;UBERON:0001434,3.80e-09,100;UBERON:0000479,5.70e-09,773;UBERON:0000926,1.04e-08,315;UBERON:0004120,1.04e-08,315;UBERON:0006603,1.04e-08,315 | |||
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| ||
|short_description=p2@LIPA | |short_description=p2@LIPA | ||
}} | }} |
Latest revision as of 21:48, 19 September 2015
Short description: | p2@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LIPA_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_ENST00000542307_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | F5H6K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.78e-19 | 48 |
phagocyte | 2.78e-19 | 48 |
monopoietic cell | 2.44e-17 | 59 |
monocyte | 2.44e-17 | 59 |
monoblast | 2.44e-17 | 59 |
promonocyte | 2.44e-17 | 59 |
macrophage dendritic cell progenitor | 2.74e-16 | 61 |
classical monocyte | 1.86e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.86e-15 | 42 |
myeloid lineage restricted progenitor cell | 1.40e-13 | 66 |
granulocyte monocyte progenitor cell | 2.24e-13 | 67 |
myeloid leukocyte | 2.55e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 3.37e-15 | 564 |
germ layer | 1.32e-14 | 560 |
germ layer / neural crest | 1.32e-14 | 560 |
embryonic tissue | 1.32e-14 | 560 |
presumptive structure | 1.32e-14 | 560 |
germ layer / neural crest derived structure | 1.32e-14 | 560 |
epiblast (generic) | 1.32e-14 | 560 |
hematopoietic system | 1.16e-13 | 98 |
blood island | 1.16e-13 | 98 |
developing anatomical structure | 2.53e-13 | 581 |
hemolymphoid system | 1.42e-12 | 108 |
bone marrow | 6.15e-12 | 76 |
musculoskeletal system | 2.73e-11 | 167 |
immune system | 3.91e-11 | 93 |
embryo | 4.06e-11 | 592 |
bone element | 1.86e-10 | 82 |
skeletal element | 3.02e-10 | 90 |
skeletal system | 3.80e-09 | 100 |
tissue | 5.70e-09 | 773 |
mesoderm | 1.04e-08 | 315 |
mesoderm-derived structure | 1.04e-08 | 315 |
presumptive mesoderm | 1.04e-08 | 315 |