FFCP PHASE1:Hg19::chr11:110128922..110128926,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5962 | |EntrezGene=5962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9944 | |HGNC=9944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000529774_5end | |association_with_transcript=6bp_to_ENST00000529774_5end | ||
|cluster_id=chr11:110128922..110128926,- | |||
|description=CAGE_peak_15_at_RDX_5end | |description=CAGE_peak_15_at_RDX_5end | ||
|id=chr11:110128922..110128926,- | |id=chr11:110128922..110128926,- | ||
|ontology_enrichment_celltype=CL:0000860!1.19e-07!45;CL:0002057!1.37e-07!42 | |ontology_enrichment_celltype=CL:0000860!1.19e-07!45;CL:0002057!1.37e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0002394;8.81e-14;4!UBERON:0003928;8.81e-14;4!UBERON:0002294;1.89e-08;7!UBERON:0001173;1.89e-08;7!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001781,1.00e-13,4;UBERON:0002394,1.22e-09,6;UBERON:0003928,1.22e-09,6;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9;UBERON:0000010,7.91e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0,0,0,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0.552567831062295,0,0,0,0,0,4.11748701753901,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0.588187602953219,0,0.569261198172555,0,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.410716136675979,0,0,0.788662062837943,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0,0,0,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0.552567831062295,0,0,0,0,0,4.11748701753901,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0.588187602953219,0,0.569261198172555,0,0.210998064528027,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.410716136675979,0,0,0.788662062837943,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@RDX | |short_description=p15@RDX | ||
}} | }} |
Latest revision as of 01:29, 25 September 2015
Short description: | p15@RDX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RDX_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000529774_5end |
EntrezGene: | RDX |
HGNC: | 9944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
layer of retina | 1.00e-13 | 4 |
bile duct | 1.22e-09 | 6 |
digestive system duct | 1.22e-09 | 6 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
biliary system | 7.48e-07 | 9 |
biliary tree | 7.48e-07 | 9 |
biliary bud | 7.48e-07 | 9 |
peripheral nervous system | 7.91e-07 | 8 |