FFCP PHASE1:Hg19::chr11:18287764..18287791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6288 | |EntrezGene=6288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10513 | |HGNC=10513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001moa.3,uc010rda.1,uc010rdb.1_5end | |association_with_transcript=0bp_to_uc001moa.3,uc010rda.1,uc010rdb.1_5end | ||
|cluster_id=chr11:18287764..18287791,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_SAA1_5end | |description=CAGE_peak_1_at_SAA1_5end | ||
|id=chr11:18287764..18287791,+ | |id=chr11:18287764..18287791,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-15!254;CL:0002076!3.71e-15!43;CL:0000223!3.62e-12!59;CL:0000220!6.73e-11!246;CL:0002321!1.36e-10!248;CL:0000136!5.12e-09!15;CL:0002159!3.09e-08!13;CL:0002368!3.47e-08!13;CL:0000077!3.54e-07!19;CL:0002251!3.89e-07!21;CL:0000154!6.67e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.29e-15!254;CL:0002076!3.71e-15!43;CL:0000223!3.62e-12!59;CL:0000220!6.73e-11!246;CL:0002321!1.36e-10!248;CL:0000136!5.12e-09!15;CL:0002159!3.09e-08!13;CL:0002368!3.47e-08!13;CL:0000077!3.54e-07!19;CL:0002251!3.89e-07!21;CL:0000154!6.67e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.66e-15;42!CL:0000136;9.82e-15;13!CL:0002368;2.11e-12;13!CL:0000154;4.81e-11;6!CL:0000622;5.84e-10;5!CL:0000150;1.75e-09;9!CL:0002159;2.09e-09;14!CL:0002251;7.71e-09;20!CL:1000507;1.79e-07;10!CL:1000494;1.79e-07;10!CL:0002615;3.94e-07;3!CL:0002166;4.18e-07;3!CL:0002623;6.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.29e-18,42;CL:0000223,1.96e-17,58;CL:0000066,4.35e-17,253;CL:0002368,2.00e-12,13;CL:0000136,2.10e-12,15;CL:0000154,4.14e-11,6;CL:0002321,1.26e-10,250;CL:0000622,5.64e-10,5;CL:0000150,1.98e-09,9;CL:0002159,2.00e-09,14;CL:0002251,7.90e-09,20;CL:1000507,1.64e-07,10;CL:1000494,1.64e-07,10;CL:0002615,3.87e-07,3;CL:0002166,4.27e-07,3;CL:0002623,7.04e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.24e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.94e-13!216;UBERON:0009569!3.86e-12!113;UBERON:0004119!2.11e-11!169;UBERON:0000925!2.11e-11!169;UBERON:0006595!2.11e-11!169;UBERON:0003104!7.66e-11!238;UBERON:0009142!7.66e-11!238;UBERON:0002530!9.63e-11!59;UBERON:0000466!2.28e-10!126;UBERON:0002365!1.18e-09!31;UBERON:0002330!1.18e-09!31;UBERON:0000475!1.24e-09!365;UBERON:0002417!2.53e-09!61;UBERON:0000916!2.53e-09!61;UBERON:0005256!3.99e-09!143;UBERON:0001007!1.32e-08!155;UBERON:0001555!1.32e-08!155;UBERON:0007026!1.32e-08!155;UBERON:0005911!2.06e-08!82;UBERON:0000161!2.89e-08!35;UBERON:0000166!1.23e-07!21;UBERON:0000464!1.29e-07!104;UBERON:0000058!1.84e-07!26;UBERON:0001008!2.06e-07!45;UBERON:0001044!5.18e-07!6;UBERON:0003293!5.18e-07!6;UBERON:0003294!5.18e-07!6;UBERON:0010047!5.18e-07!6;UBERON:0000167!5.18e-07!6;UBERON:0006554!5.80e-07!44;UBERON:0003929!7.75e-07!54;UBERON:0000165!8.06e-07!28;UBERON:0000930!8.06e-07!28;UBERON:0001004!8.37e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;3.93e-17;31!UBERON:0002330;3.93e-17;31!UBERON:0001044;2.88e-11;6!UBERON:0003293;2.88e-11;6!UBERON:0003294;2.88e-11;6!UBERON:0010047;2.88e-11;6!UBERON:0003408;2.88e-11;6!UBERON:0000167;2.88e-11;6!UBERON:0003350;1.76e-07;8!UBERON:0004211;1.79e-07;10!UBERON:0009773;1.79e-07;10!UBERON:0001231;1.79e-07;10!UBERON:0004810;1.79e-07;10!UBERON:0002530;2.23e-07;57!UBERON:0001041;2.95e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.29e-17,31;UBERON:0002330,1.29e-17,31;UBERON:0009569,2.15e-15,112;UBERON:0002100,2.21e-11,199;UBERON:0001044,2.64e-11,6;UBERON:0003293,2.64e-11,6;UBERON:0003294,2.64e-11,6;UBERON:0010047,2.64e-11,6;UBERON:0000167,2.64e-11,6;UBERON:0002530,1.76e-10,59;UBERON:0002417,7.43e-10,60;UBERON:0000916,7.43e-10,60;UBERON:0004119,2.34e-09,160;UBERON:0000925,2.34e-09,160;UBERON:0006595,2.34e-09,160;UBERON:0005177,3.19e-08,101;UBERON:0004810,1.64e-07,10;UBERON:0003350,1.82e-07,8;UBERON:0001007,3.06e-07,145;UBERON:0001555,3.06e-07,145;UBERON:0007026,3.06e-07,145;UBERON:0001041,4.02e-07,87;UBERON:0005172,4.40e-07,54;UBERON:0005173,4.40e-07,54;UBERON:0005911,6.48e-07,82 | |||
|phase1_expression=16.7144108928912,47.3162157799073,17.4783461079004,46.03371724244,25.4767823823554,36.6382180122155,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.35536979583142,3.614471025339,5.54631015250181,0,0,0,0,0,0,1.56740831967947,0.971680998056939,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0.973269740605272,0,0,0,0.327447688744282,2.18577172975525,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84969293856562,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,8.31021668602176,12.8190676677692,8.03052867089211,0,0,0,0,0,0,0,1.28648187638577,4.14404764057442,8.35862270457562,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,264.918022777627,388.216750587662,307.801541381012,0,1.47586126251736,0,3.62175941848464,3.37205259772859,0.603173834469785,1.48141512253647,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,37.4935335947108,21.1657481530563,17.0130116690864,7.43335738433641,9.59091997096074,11.8848630541215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,2.57360388584666,3.25572963234866,0.823240336780769,0,3.19852753868291,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,1.15825045334063,0.410952645100767,1.96967059563885,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.744323423456331,3.99001130548962,2.80660094433074,0.256278298511402,3.07024349440022,0.321707842287215,26.7152519600984,0,0,0,0,0,0.966875596732978,9.2232976339511,0.276242966807689,0.114814448164607,0,0,2.25599806453706,1.61732207919271,0.784349769176855,4.38417673959782,4.96092655796516,0,0,0,0,0.270946437543853,0.501689773854853,5.60727800699084,5.81753206250107,1.34324852833307,0,0,0,0,0,1.64865618636356,0,0,5.74265537996172,5.85054221432869,1.6068392984416,0,0,0,0.551346289938122,0.429680979473094,1.0151168573996,0,0,12.7269384827953,9.80169343562041,4.72167036229961,9.40767361956614,0,0.31481234683064,0,0,0,0,0.37064843820784,0,1.116475108079,0.632758849437452,2.85945290885737,0,0,0,0.78494864019923,0.719489830333259,0,0.117812402345686,0,0,0,1.46290121726877,0,0,0,0,0,0,4.64407282668854,3.06915619677634,0,0,0.202910376962704,0,0,0,0.491245205065606,0.35667105148125,0,0,0,0,0,2.59799704358883,1.34060455107157,15.2447378805852,1.41215701165169,2.58303223602738,3.36942951335251,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6252606722861,0,0,0.284136146806413,0,0,0,0,0,1.11308705022906,0,0,0.398495976502139,0,0,0,0,0,7.09959974063882,0.179021174675609,0,0,0,0,0,0,0,0,0,8.69999490521752,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,8.20382802098409,0.23056390438806,0.807818799687949,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.89898258075224,2.93819054686466,0,0,0,0.796118080530053,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,6.88733717950519,0,0,0,0,0,0,4.26914319044689,0,0,2.25382514053069,0.69647365264322,0.698906672968121,0,0.0967563312890851,0,0,0.290967049465258,0,0,0.411125773940253,4.76915068087175,0,0,7.69524674414724,0,0.19980960958213,0,0,0,0.720273989940749,0,0,0.543616824294456,0.732219924186332,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,1.24643300672138,172.931635740137,2.65013777824443,0,0,0,0,1.81538601365081,0.157204305099666,0,0.496166021811951,0,0,0,32.097050398799,37.603484103405,68.9277547717789,25.2461925646549,0,0,0,0,0,0,0,0,0.74988244777264,0,0,2.11739237728355,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24901556081802,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,1.15571898244382,5.57548137574807,0.782982875895635,0.906823702049089,0,0.489473409012935,0.895444205407437,0.617602894321944,6.1399533882038,0,1.54331230616732,4.05461857567374,0.256241518587947,3.79973375904318,0,0,0,0,0,2.29326894192489,0.245772908753719,1.05656061679314,0,0,0,0,0,2.51783113895,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0.196295437002051,0,0.917142992608395,0.231051332300676,0,0,0,0,0.80682027481408,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,2.74128883428591,0,0,6.00483409906098,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0,0.111231401892069,0.706437835654626,0,0,0,0.863710364874486,3.34426181520935,0.071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|phase1_expression=16.7144108928912,47.3162157799073,17.4783461079004,46.03371724244,25.4767823823554,36.6382180122155,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.35536979583142,3.614471025339,5.54631015250181,0,0,0,0,0,0,1.56740831967947,0.971680998056939,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0.973269740605272,0,0,0,0.327447688744282,2.18577172975525,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84969293856562,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,8.31021668602176,12.8190676677692,8.03052867089211,0,0,0,0,0,0,0,1.28648187638577,4.14404764057442,8.35862270457562,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,264.918022777627,388.216750587662,307.801541381012,0,1.47586126251736,0,3.62175941848464,3.37205259772859,0.603173834469785,1.48141512253647,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,37.4935335947108,21.1657481530563,17.0130116690864,7.43335738433641,9.59091997096074,11.8848630541215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,2.57360388584666,3.25572963234866,0.823240336780769,0,3.19852753868291,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,1.15825045334063,0.410952645100767,1.96967059563885,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.744323423456331,3.99001130548962,2.80660094433074,0.256278298511402,3.07024349440022,0.321707842287215,26.7152519600984,0,0,0,0,0,0.966875596732978,9.2232976339511,0.276242966807689,0.114814448164607,0,0,2.25599806453706,1.61732207919271,0.784349769176855,4.38417673959782,4.96092655796516,0,0,0,0,0.270946437543853,0.501689773854853,5.60727800699084,5.81753206250107,1.34324852833307,0,0,0,0,0,1.64865618636356,0,0,5.74265537996172,5.85054221432869,1.6068392984416,0,0,0,0.551346289938122,0.429680979473094,1.0151168573996,0,0,12.7269384827953,9.80169343562041,4.72167036229961,9.40767361956614,0,0.31481234683064,0,0,0,0,0.37064843820784,0,1.116475108079,0.632758849437452,2.85945290885737,0,0,0,0.78494864019923,0.719489830333259,0,0.117812402345686,0,0,0,1.46290121726877,0,0,0,0,0,0,4.64407282668854,3.06915619677634,0,0,0.202910376962704,0,0,0,0.491245205065606,0.35667105148125,0,0,0,0,0,2.59799704358883,1.34060455107157,15.2447378805852,1.41215701165169,2.58303223602738,3.36942951335251,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6252606722861,0,0,0.284136146806413,0,0,0,0,0,1.11308705022906,0,0,0.398495976502139,0,0,0,0,0,7.09959974063882,0.179021174675609,0,0,0,0,0,0,0,0,0,8.69999490521752,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,8.20382802098409,0.23056390438806,0.807818799687949,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.89898258075224,2.93819054686466,0,0,0,0.796118080530053,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,6.88733717950519,0,0,0,0,0,0,4.26914319044689,0,0,2.25382514053069,0.69647365264322,0.698906672968121,0,0.0967563312890851,0,0,0.290967049465258,0,0,0.411125773940253,4.76915068087175,0,0,7.69524674414724,0,0.19980960958213,0,0,0,0.720273989940749,0,0,0.543616824294456,0.732219924186332,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,1.24643300672138,172.931635740137,2.65013777824443,0,0,0,0,1.81538601365081,0.157204305099666,0,0.496166021811951,0,0,0,32.097050398799,37.603484103405,68.9277547717789,25.2461925646549,0,0,0,0,0,0,0,0,0.74988244777264,0,0,2.11739237728355,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24901556081802,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,1.15571898244382,5.57548137574807,0.782982875895635,0.906823702049089,0,0.489473409012935,0.895444205407437,0.617602894321944,6.1399533882038,0,1.54331230616732,4.05461857567374,0.256241518587947,3.79973375904318,0,0,0,0,0,2.29326894192489,0.245772908753719,1.05656061679314,0,0,0,0,0,2.51783113895,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0.196295437002051,0,0.917142992608395,0.231051332300676,0,0,0,0,0.80682027481408,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,2.74128883428591,0,0,6.00483409906098,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0,0.111231401892069,0.706437835654626,0,0,0,0.863710364874486,3.34426181520935,0.071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| ||
|short_description=p1@SAA1 | |short_description=p1@SAA1 | ||
}} | }} |
Latest revision as of 02:16, 17 September 2015
Short description: | p1@SAA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SAA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_uc001moa.3, uc010rda.1, uc010rdb.1_5end |
EntrezGene: | SAA1 |
HGNC: | 10513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.29e-18 | 42 |
endodermal cell | 1.96e-17 | 58 |
epithelial cell | 4.35e-17 | 253 |
respiratory epithelial cell | 2.00e-12 | 13 |
fat cell | 2.10e-12 | 15 |
protein secreting cell | 4.14e-11 | 6 |
embryonic cell | 1.26e-10 | 250 |
acinar cell | 5.64e-10 | 5 |
glandular epithelial cell | 1.98e-09 | 9 |
general ecto-epithelial cell | 2.00e-09 | 14 |
epithelial cell of alimentary canal | 7.90e-09 | 20 |
kidney tubule cell | 1.64e-07 | 10 |
nephron tubule epithelial cell | 1.64e-07 | 10 |
adipocyte of omentum tissue | 3.87e-07 | 3 |
epithelial cell of Malassez | 4.27e-07 | 3 |
acinar cell of salivary gland | 7.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.29e-17 | 31 |
exocrine system | 1.29e-17 | 31 |
subdivision of trunk | 2.15e-15 | 112 |
trunk | 2.21e-11 | 199 |
saliva-secreting gland | 2.64e-11 | 6 |
gland of oral region | 2.64e-11 | 6 |
gland of foregut | 2.64e-11 | 6 |
oral gland | 2.64e-11 | 6 |
oral cavity | 2.64e-11 | 6 |
gland | 1.76e-10 | 59 |
abdominal segment of trunk | 7.43e-10 | 60 |
abdomen | 7.43e-10 | 60 |
endoderm-derived structure | 2.34e-09 | 160 |
endoderm | 2.34e-09 | 160 |
presumptive endoderm | 2.34e-09 | 160 |
trunk region element | 3.19e-08 | 101 |
nephron tubule epithelium | 1.64e-07 | 10 |
epithelium of mucosa | 1.82e-07 | 8 |
digestive system | 3.06e-07 | 145 |
digestive tract | 3.06e-07 | 145 |
primitive gut | 3.06e-07 | 145 |
foregut | 4.02e-07 | 87 |
abdomen element | 4.40e-07 | 54 |
abdominal segment element | 4.40e-07 | 54 |
endo-epithelium | 6.48e-07 | 82 |