FFCP PHASE1:Hg19::chr11:60859886..60859898,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60859886..60859898,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr11:60859886..60859898,- | |description=CAGE_peak_at_chr11:60859886..60859898,- | ||
|id=chr11:60859886..60859898,- | |id=chr11:60859886..60859898,- | ||
|ontology_enrichment_celltype=CL:0000738!8.57e-35!140;CL:0002031!2.27e-31!124;CL:0000988!2.62e-30!182;CL:0002032!2.71e-30!165;CL:0000837!2.71e-30!165;CL:0000557!1.06e-29!71;CL:0002087!1.45e-29!119;CL:0002009!8.74e-29!65;CL:0000037!1.65e-28!172;CL:0000566!1.65e-28!172;CL:0000839!5.29e-28!70;CL:0002194!1.29e-27!63;CL:0000576!1.29e-27!63;CL:0000040!1.29e-27!63;CL:0000559!1.29e-27!63;CL:0000766!4.42e-27!76;CL:0002057!1.30e-25!42;CL:0000763!2.88e-24!112;CL:0000049!2.88e-24!112;CL:0000860!1.77e-23!45;CL:0000990!8.09e-11!8;CL:0000453!6.63e-10!5;CL:0000451!1.07e-08!10;CL:0000134!4.89e-07!358 | |ontology_enrichment_celltype=CL:0000738!8.57e-35!140;CL:0002031!2.27e-31!124;CL:0000988!2.62e-30!182;CL:0002032!2.71e-30!165;CL:0000837!2.71e-30!165;CL:0000557!1.06e-29!71;CL:0002087!1.45e-29!119;CL:0002009!8.74e-29!65;CL:0000037!1.65e-28!172;CL:0000566!1.65e-28!172;CL:0000839!5.29e-28!70;CL:0002194!1.29e-27!63;CL:0000576!1.29e-27!63;CL:0000040!1.29e-27!63;CL:0000559!1.29e-27!63;CL:0000766!4.42e-27!76;CL:0002057!1.30e-25!42;CL:0000763!2.88e-24!112;CL:0000049!2.88e-24!112;CL:0000860!1.77e-23!45;CL:0000990!8.09e-11!8;CL:0000453!6.63e-10!5;CL:0000451!1.07e-08!10;CL:0000134!4.89e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.77e-43;5!CL:0000990;3.00e-24;8!CL:0000451;6.56e-20;10!CL:0000946;7.63e-15;1!CL:0000786;7.63e-15;1!CL:0000860;1.94e-13;33!CL:0002057;1.94e-13;33!CL:0000473;1.67e-10;39!CL:0000234;1.67e-10;39!CL:0001014;6.80e-08;2!CL:0001016;6.80e-08;2!CL:0000738;2.86e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.63e-43,5;CL:0000990,2.92e-24,8;CL:0000451,6.41e-20,10;CL:0000738,1.65e-17,136;CL:0000946,7.13e-15,1;CL:0000786,7.13e-15,1;CL:0000980,7.13e-15,1;CL:0002032,1.42e-14,161;CL:0000837,1.42e-14,161;CL:0000037,6.61e-14,168;CL:0000763,1.73e-13,108;CL:0000049,1.73e-13,108;CL:0000988,4.00e-13,177;CL:0002031,6.04e-12,120;CL:0000557,1.21e-11,67;CL:0000860,5.09e-11,42;CL:0002057,5.09e-11,42;CL:0002009,6.94e-10,61;CL:0000473,1.33e-09,48;CL:0000234,1.33e-09,48;CL:0000839,4.24e-09,66;CL:0000766,2.64e-08,72;CL:0002087,2.82e-08,115;CL:0000785,4.38e-08,2;CL:0000955,4.38e-08,2;CL:0000818,4.38e-08,2;CL:0000954,4.38e-08,2;CL:0000816,4.38e-08,2;CL:0001014,6.58e-08,2;CL:0001016,6.58e-08,2;CL:0002194,1.29e-07,59;CL:0000576,1.29e-07,59;CL:0000040,1.29e-07,59;CL:0000559,1.29e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000954;4.53e-08;2!CL:0002057;5.53e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.72e-14;1!DOID:0060061;1.72e-14;1!DOID:8691;1.72e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.41e-14,1;DOID:0060061,1.41e-14,1;DOID:8691,1.41e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-30!102;UBERON:0003061!1.50e-30!102;UBERON:0002193!3.59e-30!112;UBERON:0002371!2.23e-25!80;UBERON:0002405!2.64e-24!115;UBERON:0001474!5.33e-23!86;UBERON:0004765!2.66e-18!101;UBERON:0001434!2.66e-18!101;UBERON:0003081!1.16e-09!216;UBERON:0004177!1.26e-08!7;UBERON:0002204!7.03e-08!167;UBERON:0002106!8.10e-08!3;UBERON:0004854!8.10e-08!3;UBERON:0009034!8.10e-08!3;UBERON:0002095!8.10e-08!3;UBERON:0004782!8.10e-08!3;UBERON:0003281!8.10e-08!3;UBERON:0009664!8.10e-08!3;UBERON:0002296!8.10e-08!3;UBERON:0005602!8.10e-08!3;UBERON:0001179!8.10e-08!3;UBERON:0006293!8.10e-08!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.42e-10,76;UBERON:0001474,2.13e-09,82;UBERON:0004765,1.67e-08,90;UBERON:0002405,3.32e-08,93;UBERON:0002390,9.47e-08,98;UBERON:0003061,9.47e-08,98;UBERON:0001434,1.40e-07,100;UBERON:0002193,5.80e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0,0,0.929716147622738,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0,2.14258724659632,0.962787081228281,1.91801137739712,0,0,0,1.45104619314292,1.13477044938228,1.86846674698672,0,0.521482918420201,0.217188844705117,0,0.736555271975129,0.949387162322653,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,1.00269411196656,0,0,0.270803863765016,0.384273959177026,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0.594524649154913,0,0,0,0,0,0,1.47798971368783,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65094895634227,4.11881004971426,4.90696182767533,0,0,0,1.79988656269437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,2.99608367645026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0,0,0.929716147622738,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0,2.14258724659632,0.962787081228281,1.91801137739712,0,0,0,1.45104619314292,1.13477044938228,1.86846674698672,0,0.521482918420201,0.217188844705117,0,0.736555271975129,0.949387162322653,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,1.00269411196656,0,0,0.270803863765016,0.384273959177026,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0.594524649154913,0,0,0,0,0,0,1.47798971368783,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65094895634227,4.11881004971426,4.90696182767533,0,0,0,1.79988656269437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,2.99608367645026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr11:60859886..60859898,- | |short_description=p@chr11:60859886..60859898,- | ||
}} | }} |
Latest revision as of 23:21, 23 July 2015
Short description: | p@chr11:60859886..60859898, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60859886..60859898, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.42e-10 | 76 |
bone element | 2.13e-09 | 82 |
skeletal element | 1.67e-08 | 90 |
immune system | 3.32e-08 | 93 |
hematopoietic system | 9.47e-08 | 98 |
blood island | 9.47e-08 | 98 |
skeletal system | 1.40e-07 | 100 |
hemolymphoid system | 5.80e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.41e-14 | 1 |
cutaneous T cell lymphoma | 1.41e-14 | 1 |
mycosis fungoides | 1.41e-14 | 1 |