FFCP PHASE1:Mm9::chr1:4798327..4798368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18777 | |EntrezGene=18777 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUG4 | |UniProt=D3YUG4 | ||
|association_with_transcript=9bp_to_ENSMUST00000131119_5end | |association_with_transcript=9bp_to_ENSMUST00000131119_5end | ||
|cluster_id=chr1:4798327..4798368,+ | |||
|description=CAGE_peak_2_at_Lypla1_5end | |description=CAGE_peak_2_at_Lypla1_5end | ||
|id=chr1:4798327..4798368,+ | |id=chr1:4798327..4798368,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.43e-11!9;CL:0002251!8.43e-11!9;CL:0000066!1.47e-09!25;CL:0000239!2.28e-08!6;CL:0000677!2.28e-08!6;CL:0000212!2.28e-08!6;CL:0000584!2.28e-08!6;CL:0000075!5.47e-07!7;CL:0000223!9.65e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.06e-14,9;CL:0002251,1.06e-14,9;CL:0000066,2.44e-14,25;CL:0000239,1.28e-13,6;CL:0000677,1.28e-13,6;CL:0000584,1.28e-13,6;CL:0000075,1.45e-11,7;CL:0000223,8.69e-11,20;CL:0002076,2.87e-08,15;CL:0000682,3.30e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.76e-19!43;UBERON:0000344!3.45e-18!15;UBERON:0005409!1.25e-16!59;UBERON:0001242!6.81e-16!13;UBERON:0000060!6.81e-16!13;UBERON:0001262!6.81e-16!13;UBERON:0004786!6.81e-16!13;UBERON:0004923!2.89e-12!24;UBERON:0003350!8.43e-11!9;UBERON:0004808!8.43e-11!9;UBERON:0001277!8.43e-11!9;UBERON:0000485!5.36e-10!11;UBERON:0004119!2.56e-09!130;UBERON:0000925!2.56e-09!130;UBERON:0006595!2.56e-09!130;UBERON:0001007!4.64e-09!128;UBERON:0001555!4.64e-09!128;UBERON:0007026!4.64e-09!128;UBERON:0004921!6.12e-08!126;UBERON:0004185!6.12e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.96e-44,31;UBERON:0005409,1.65e-29,47;UBERON:0000344,1.34e-27,15;UBERON:0001242,1.49e-23,13;UBERON:0001262,1.49e-23,13;UBERON:0004786,1.49e-23,13;UBERON:0004923,5.62e-16,24;UBERON:0003350,1.06e-14,9;UBERON:0004808,1.06e-14,9;UBERON:0001277,1.06e-14,9;UBERON:0001007,6.61e-13,116;UBERON:0001555,6.61e-13,116;UBERON:0007026,6.61e-13,116;UBERON:0004119,1.45e-12,118;UBERON:0000925,1.45e-12,118;UBERON:0006595,1.45e-12,118;UBERON:0000485,8.95e-12,11;UBERON:0004921,4.85e-11,114;UBERON:0002108,2.64e-10,4;UBERON:0000331,3.48e-08,3;UBERON:0002116,3.48e-08,3;UBERON:0001204,3.48e-08,3;UBERON:0001168,3.48e-08,3 | |||
|phase1_expression=0.160148847104794,16.0528687514106,11.3749809847384,11.4936400296595,11.520601788766,2.85394762250213,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,9.75953779039781,7.34109699414944,24.1177424928308,17.230479846363,9.48073423817912,20.1424824623756,23.6908321974335,9.3126814475228,0,0,0,1.1554064790051,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,1.29955283489534,1.34408066129201,0.983110940922263,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,21.7138496927303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0943402046714,1.58670339998127,0,0,0.257734922644187,0.605050573870028,2.00140239460383,3.42406127002606,15.1849299694244,2.63518327558417,3.2673577144035,1.98956472041151,1.55971269695296,15.2799299471218,15.1296634912286,15.3338780405863,0,0.114248512609729,0,1.01825663922657,0.581857461502877,0.420814919341911,2.71917109634306,4.87113488332687,10.9899109488962,6.54004968785543,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,3.24037433229482,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,16.0528687514106,11.3749809847384,11.4936400296595,11.520601788766,2.85394762250213,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,9.75953779039781,7.34109699414944,24.1177424928308,17.230479846363,9.48073423817912,20.1424824623756,23.6908321974335,9.3126814475228,0,0,0,1.1554064790051,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,1.29955283489534,1.34408066129201,0.983110940922263,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,21.7138496927303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0943402046714,1.58670339998127,0,0,0.257734922644187,0.605050573870028,2.00140239460383,3.42406127002606,15.1849299694244,2.63518327558417,3.2673577144035,1.98956472041151,1.55971269695296,15.2799299471218,15.1296634912286,15.3338780405863,0,0.114248512609729,0,1.01825663922657,0.581857461502877,0.420814919341911,2.71917109634306,4.87113488332687,10.9899109488962,6.54004968785543,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,3.24037433229482,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p2@Lypla1 | |short_description=p2@Lypla1 | ||
}} | }} |
Latest revision as of 04:40, 27 September 2015
Short description: | p2@Lypla1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lypla1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 9bp_to_ENSMUST00000131119_5end |
EntrezGene: | Lypla1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.06e-14 | 9 |
epithelial cell of alimentary canal | 1.06e-14 | 9 |
epithelial cell | 2.44e-14 | 25 |
brush border epithelial cell | 1.28e-13 | 6 |
gut absorptive cell | 1.28e-13 | 6 |
enterocyte | 1.28e-13 | 6 |
columnar/cuboidal epithelial cell | 1.45e-11 | 7 |
endodermal cell | 8.69e-11 | 20 |
endo-epithelial cell | 2.87e-08 | 15 |
M cell of gut | 3.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.96e-44 | 31 |
gastrointestinal system | 1.65e-29 | 47 |
mucosa | 1.34e-27 | 15 |
intestinal mucosa | 1.49e-23 | 13 |
wall of intestine | 1.49e-23 | 13 |
gastrointestinal system mucosa | 1.49e-23 | 13 |
organ component layer | 5.62e-16 | 24 |
epithelium of mucosa | 1.06e-14 | 9 |
gastrointestinal system epithelium | 1.06e-14 | 9 |
intestinal epithelium | 1.06e-14 | 9 |
digestive system | 6.61e-13 | 116 |
digestive tract | 6.61e-13 | 116 |
primitive gut | 6.61e-13 | 116 |
endoderm-derived structure | 1.45e-12 | 118 |
endoderm | 1.45e-12 | 118 |
presumptive endoderm | 1.45e-12 | 118 |
simple columnar epithelium | 8.95e-12 | 11 |
subdivision of digestive tract | 4.85e-11 | 114 |
small intestine | 2.64e-10 | 4 |
ileal mucosa | 3.48e-08 | 3 |
ileum | 3.48e-08 | 3 |
mucosa of small intestine | 3.48e-08 | 3 |
wall of small intestine | 3.48e-08 | 3 |