FFCP PHASE1:Mm9::chr15:6519558..6519565,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:6519558..6519565,+ | |||
|description=CAGE_peak_at_chr15:6519558..6519565,+ | |description=CAGE_peak_at_chr15:6519558..6519565,+ | ||
|id=chr15:6519558..6519565,+ | |id=chr15:6519558..6519565,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,8.94e-30,3;CL:0002540,8.94e-30,3;CL:0002476,4.07e-21,2;CL:0002194,4.60e-11,4;CL:0000766,4.60e-11,4;CL:0000234,4.60e-11,4;CL:0000576,4.60e-11,4;CL:0000235,4.60e-11,4;CL:0000864,4.60e-11,4;CL:0002009,4.60e-11,4;CL:0000040,4.60e-11,4;CL:0000559,4.60e-11,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.95e-08!70;UBERON:0002371!2.15e-07!16 | |ontology_enrichment_uberon=UBERON:0002405!1.95e-08!70;UBERON:0002371!2.15e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.30e-15,16;UBERON:0002193,7.55e-13,48;UBERON:0002405,7.55e-13,48;UBERON:0001474,2.10e-11,22;UBERON:0004765,2.10e-11,22;UBERON:0001434,2.10e-11,22;UBERON:0000029,4.58e-11,1;UBERON:0001097,4.58e-11,1;UBERON:0003968,4.58e-11,1;UBERON:0001467,4.58e-11,1;UBERON:0002390,1.55e-10,45;UBERON:0003061,1.55e-10,45;UBERON:0002204,7.12e-08,32;UBERON:0002106,2.36e-07,6;UBERON:0004457,2.36e-07,6;UBERON:0000042,2.36e-07,6;UBERON:0004854,2.36e-07,6;UBERON:0009034,2.36e-07,6;UBERON:0002095,2.36e-07,6;UBERON:0004782,2.36e-07,6;UBERON:0003281,2.36e-07,6;UBERON:0009664,2.36e-07,6;UBERON:0002296,2.36e-07,6;UBERON:0005602,2.36e-07,6;UBERON:0001179,2.36e-07,6;UBERON:0006293,2.36e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,4.94433181283487,4.2628806896766,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0.29688427812965,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,1.24815069245824,0.252578877947112,0.717589654087649,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,6.03165135757089,13.5976420954677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.555583582109135,0.376736914009382,0.683471138605126,2.0590035588587,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,4.94433181283487,4.2628806896766,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0.29688427812965,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,1.24815069245824,0.252578877947112,0.717589654087649,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,6.03165135757089,13.5976420954677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.555583582109135,0.376736914009382,0.683471138605126,2.0590035588587,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0.441182838239031,0 | ||
|short_description=p@chr15:6519558..6519565,+ | |short_description=p@chr15:6519558..6519565,+ | ||
}} | }} |
Latest revision as of 09:18, 5 August 2015
Short description: | p@chr15:6519558..6519565, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6519558..6519565, + |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 8.94e-30 | 3 |
mesenchymal stem cell of the bone marrow | 8.94e-30 | 3 |
bone marrow macrophage | 4.07e-21 | 2 |
monopoietic cell | 4.60e-11 | 4 |
myeloid leukocyte | 4.60e-11 | 4 |
phagocyte | 4.60e-11 | 4 |
monocyte | 4.60e-11 | 4 |
macrophage | 4.60e-11 | 4 |
tissue-resident macrophage | 4.60e-11 | 4 |
macrophage dendritic cell progenitor | 4.60e-11 | 4 |
monoblast | 4.60e-11 | 4 |
promonocyte | 4.60e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.30e-15 | 16 |
hemolymphoid system | 7.55e-13 | 48 |
immune system | 7.55e-13 | 48 |
bone element | 2.10e-11 | 22 |
skeletal element | 2.10e-11 | 22 |
skeletal system | 2.10e-11 | 22 |
lymph node | 4.58e-11 | 1 |
axillary lymph node | 4.58e-11 | 1 |
peripheral lymph node | 4.58e-11 | 1 |
shoulder | 4.58e-11 | 1 |
hematopoietic system | 1.55e-10 | 45 |
blood island | 1.55e-10 | 45 |
musculoskeletal system | 7.12e-08 | 32 |
spleen | 2.36e-07 | 6 |
cavity lining | 2.36e-07 | 6 |
serous membrane | 2.36e-07 | 6 |
gastrointestinal system mesentery | 2.36e-07 | 6 |
stomach region | 2.36e-07 | 6 |
mesentery | 2.36e-07 | 6 |
gastrointestinal system serosa | 2.36e-07 | 6 |
mesentery of stomach | 2.36e-07 | 6 |
gut mesentery | 2.36e-07 | 6 |
dorsal mesentery | 2.36e-07 | 6 |
dorsal mesogastrium | 2.36e-07 | 6 |
peritoneal cavity | 2.36e-07 | 6 |
spleen primordium | 2.36e-07 | 6 |