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FFCP PHASE1:Mm9::chr6:8899812..8899830,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18231
|EntrezGene=18231
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q61200
|UniProt=Q61200
|association_with_transcript=136bp_to_ENSMUST00000060369_5end
|association_with_transcript=136bp_to_ENSMUST00000060369_5end
|cluster_id=chr6:8899812..8899830,+
|description=CAGE_peak_1_at_Nxph1_5end
|description=CAGE_peak_1_at_Nxph1_5end
|id=chr6:8899812..8899830,+
|id=chr6:8899812..8899830,+
|ontology_enrichment_celltype=CL:0000117!3.36e-15!23;CL:0000337!3.36e-15!23;CL:0000540!4.35e-08!33;CL:0000047!4.35e-08!33;CL:0000031!4.35e-08!33;CL:0000404!4.35e-08!33;CL:0000393!5.64e-07!39;CL:0000211!5.64e-07!39
|ontology_enrichment_celltype=CL:0000117!3.36e-15!23;CL:0000337!3.36e-15!23;CL:0000540!4.35e-08!33;CL:0000047!4.35e-08!33;CL:0000031!4.35e-08!33;CL:0000404!4.35e-08!33;CL:0000393!5.64e-07!39;CL:0000211!5.64e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.48e-25,23;CL:0000337,8.48e-25,23;CL:0000540,2.73e-15,33;CL:0000047,2.73e-15,33;CL:0000031,2.73e-15,33;CL:0000404,2.73e-15,33;CL:0000393,5.68e-12,39;CL:0000211,5.68e-12,39;CL:0002319,2.71e-10,43;CL:0000221,6.35e-10,44;CL:0000133,6.35e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.75e-20!52;UBERON:0005068!1.75e-20!52;UBERON:0006241!1.75e-20!52;UBERON:0007135!1.75e-20!52;UBERON:0002020!4.50e-20!34;UBERON:0000955!8.73e-20!50;UBERON:0006238!8.73e-20!50;UBERON:0002616!5.98e-19!49;UBERON:0001017!1.01e-18!73;UBERON:0005743!1.01e-18!73;UBERON:0002346!1.09e-18!71;UBERON:0003075!1.09e-18!71;UBERON:0007284!1.09e-18!71;UBERON:0004121!1.96e-18!102;UBERON:0000924!1.96e-18!102;UBERON:0006601!1.96e-18!102;UBERON:0000073!4.21e-18!75;UBERON:0001016!4.21e-18!75;UBERON:0002791!4.52e-17!29;UBERON:0003528!4.52e-17!29;UBERON:0001893!4.52e-17!29;UBERON:0000033!4.63e-17!63;UBERON:0003080!1.40e-15!40;UBERON:0003056!1.87e-15!49;UBERON:0002780!7.18e-15!39;UBERON:0001890!7.18e-15!39;UBERON:0006240!7.18e-15!39;UBERON:0000956!1.46e-11!21;UBERON:0001869!1.46e-11!21;UBERON:0000203!1.46e-11!21;UBERON:0002619!1.40e-09!17;UBERON:0002021!7.21e-09!10;UBERON:0000411!7.21e-09!10;UBERON:0001950!7.21e-09!10;UBERON:0007811!4.48e-08!86;UBERON:0000153!2.41e-07!94;UBERON:0002420!7.90e-07!8;UBERON:0007245!7.90e-07!8;UBERON:0010009!7.90e-07!8;UBERON:0010011!7.90e-07!8;UBERON:0000454!7.90e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-38,54;UBERON:0001049,1.74e-35,52;UBERON:0005068,1.74e-35,52;UBERON:0006241,1.74e-35,52;UBERON:0007135,1.74e-35,52;UBERON:0002020,3.41e-35,34;UBERON:0001017,8.97e-34,73;UBERON:0001016,1.63e-32,75;UBERON:0000955,3.47e-30,47;UBERON:0006238,3.47e-30,47;UBERON:0003528,1.26e-29,29;UBERON:0002791,1.26e-29,29;UBERON:0001893,1.26e-29,29;UBERON:0002616,1.07e-28,46;UBERON:0002346,1.32e-26,64;UBERON:0003075,1.32e-26,64;UBERON:0007284,1.32e-26,64;UBERON:0003080,2.24e-25,40;UBERON:0002780,4.29e-24,39;UBERON:0001890,4.29e-24,39;UBERON:0006240,4.29e-24,39;UBERON:0004121,7.52e-23,95;UBERON:0000924,7.52e-23,95;UBERON:0006601,7.52e-23,95;UBERON:0010371,7.01e-22,73;UBERON:0000956,1.89e-19,21;UBERON:0001869,1.89e-19,21;UBERON:0000203,1.89e-19,21;UBERON:0003056,4.78e-19,49;UBERON:0002619,1.30e-17,17;UBERON:0010314,6.01e-16,92;UBERON:0002021,4.56e-15,10;UBERON:0000411,4.56e-15,10;UBERON:0001950,4.56e-15,10;UBERON:0000025,2.25e-11,114;UBERON:0002420,2.61e-11,8;UBERON:0007245,2.61e-11,8;UBERON:0010009,2.61e-11,8;UBERON:0010011,2.61e-11,8;UBERON:0000454,2.61e-11,8;UBERON:0004111,1.43e-10,122;UBERON:0003076,3.05e-10,12;UBERON:0003057,3.05e-10,12;UBERON:0002240,9.14e-08,6;UBERON:0005174,9.14e-08,6;UBERON:0001137,9.14e-08,6;UBERON:0002950,2.96e-07,4;UBERON:0001891,2.96e-07,4;UBERON:0009616,2.96e-07,4;UBERON:0010286,2.96e-07,4;UBERON:0000369,5.53e-07,5;UBERON:0002435,5.53e-07,5;UBERON:0000204,5.53e-07,5;UBERON:0010082,5.53e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,4.23192783417626,3.1691570175309,0,0,0,0,0,0.898800331555214,0.768436610643109,1.34796496001021,0.810035629990144,1.05162480675691,2.57085885963423,3.09215957332259,4.04219637409348,2.49198224647415,4.5960939330501,4.40463523997555,5.36286819957788,8.29475279583715,3.16527090552465,2.47016637726506,4.16730696445408,7.53794097303729,12.380777420697,7.79271063661732,3.83017161115768,2.98980529678116,2.23679334990361,0,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.58937883647172,0.445326417194474,0,1.21786191324856,0.461230994512117,0.753613202763113,0.470354828542819,0,0,1.01219549843938,0,0,0,0,0,5.27005434620785,3.77004072264219,0,0,0,0,6.44099749440738,4.57500602818627,4.27224797183739,8.34356736922927,6.64860189058859,8.93488591606108,6.81413304884582,0.611036183101898,0.497627882440372,0,0,0,0.459804208866946,0.360124259610698,0.60281927134286,0.476255494059295,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0.16455984991348,0,0.243206428637567,0,0,0,5.04695876553905,2.77842453424068,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.723245292907558,0,0,0.491764273019036,0.275936746304732,7.22477654945064,6.56385444916338,0,0,0,0,0,0,0,0,0,0.292255857911312,0,21.8498495166829,0.141940085208269,0.534196811001766,0.325773918707152,1.15479086080775,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0.482503399425247,0.119372344003136,0.164140899745061,0,4.63563255026274,0.170870880797853,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0.39061315453185,0.524296722128554,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,1.46521299413812,0,0.501572104035363,9.03602948187307,5.06357760157895,5.72895513439397,7.21783365843488,5.48066015816514,9.06472676867641,4.05013500139084,8.10578165803597,6.34399372577886,8.28416498802912,0,1.19707462020309,1.19513524027894,1.45864030240976,0,0.367687016900028,0.44449345560323,0.824140228955577,0.64183841918363,0.758091635291392,1.52087579934144,1.32038438970253,0.936415074698824,0.832326981263301,0.861532034334199,0.476293691283074,0.463537303779422,0.964546102318525,1.23625770240992,1.32479028120958,0.342869252385415,0.887379030796687,0.238436189947321,1.30811774969096,1.31753132581463,1.26921911837515,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,0.474540072496697,1.18205378850676,0,0.929621047115796,0.771626443924566,1.74867404556562,0.701794825336225,0.644613162144895,0.191288332068843,0,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,4.23192783417626,3.1691570175309,0,0,0,0,0,0.898800331555214,0.768436610643109,1.34796496001021,0.810035629990144,1.05162480675691,2.57085885963423,3.09215957332259,4.04219637409348,2.49198224647415,4.5960939330501,4.40463523997555,5.36286819957788,8.29475279583715,3.16527090552465,2.47016637726506,4.16730696445408,7.53794097303729,12.380777420697,7.79271063661732,3.83017161115768,2.98980529678116,2.23679334990361,0,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.58937883647172,0.445326417194474,0,1.21786191324856,0.461230994512117,0.753613202763113,0.470354828542819,0,0,1.01219549843938,0,0,0,0,0,5.27005434620785,3.77004072264219,0,0,0,0,6.44099749440738,4.57500602818627,4.27224797183739,8.34356736922927,6.64860189058859,8.93488591606108,6.81413304884582,0.611036183101898,0.497627882440372,0,0,0,0.459804208866946,0.360124259610698,0.60281927134286,0.476255494059295,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0.16455984991348,0,0.243206428637567,0,0,0,5.04695876553905,2.77842453424068,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.723245292907558,0,0,0.491764273019036,0.275936746304732,7.22477654945064,6.56385444916338,0,0,0,0,0,0,0,0,0,0.292255857911312,0,21.8498495166829,0.141940085208269,0.534196811001766,0.325773918707152,1.15479086080775,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0.482503399425247,0.119372344003136,0.164140899745061,0,4.63563255026274,0.170870880797853,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0.39061315453185,0.524296722128554,0,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0,1.46521299413812,0,0.501572104035363,9.03602948187307,5.06357760157895,5.72895513439397,7.21783365843488,5.48066015816514,9.06472676867641,4.05013500139084,8.10578165803597,6.34399372577886,8.28416498802912,0,1.19707462020309,1.19513524027894,1.45864030240976,0,0.367687016900028,0.44449345560323,0.824140228955577,0.64183841918363,0.758091635291392,1.52087579934144,1.32038438970253,0.936415074698824,0.832326981263301,0.861532034334199,0.476293691283074,0.463537303779422,0.964546102318525,1.23625770240992,1.32479028120958,0.342869252385415,0.887379030796687,0.238436189947321,1.30811774969096,1.31753132581463,1.26921911837515,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,0.474540072496697,1.18205378850676,0,0.929621047115796,0.771626443924566,1.74867404556562,0.701794825336225,0.644613162144895,0.191288332068843,0,0.463735671240843
|short_description=p1@Nxph1
|short_description=p1@Nxph1
}}
}}

Latest revision as of 21:34, 1 October 2015

Short description:p1@Nxph1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nxph1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 136bp_to_ENSMUST00000060369_5end
EntrezGene:Nxph1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nxph1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B26.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I921.85
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.48e-2523
neuroblast (sensu Vertebrata)8.48e-2523
neuron2.73e-1533
neuronal stem cell2.73e-1533
neuroblast2.73e-1533
electrically signaling cell2.73e-1533
electrically responsive cell5.68e-1239
electrically active cell5.68e-1239
neural cell2.71e-1043
ectodermal cell6.35e-1044
neurectodermal cell6.35e-1044

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.58e-3854
neural tube1.74e-3552
neural rod1.74e-3552
future spinal cord1.74e-3552
neural keel1.74e-3552
gray matter3.41e-3534
central nervous system8.97e-3473
nervous system1.63e-3275
brain3.47e-3047
future brain3.47e-3047
brain grey matter1.26e-2929
regional part of telencephalon1.26e-2929
telencephalon1.26e-2929
regional part of brain1.07e-2846
neurectoderm1.32e-2664
neural plate1.32e-2664
presumptive neural plate1.32e-2664
anterior neural tube2.24e-2540
regional part of forebrain4.29e-2439
forebrain4.29e-2439
future forebrain4.29e-2439
ectoderm-derived structure7.52e-2395
ectoderm7.52e-2395
presumptive ectoderm7.52e-2395
ecto-epithelium7.01e-2273
cerebral cortex1.89e-1921
cerebral hemisphere1.89e-1921
pallium1.89e-1921
pre-chordal neural plate4.78e-1949
regional part of cerebral cortex1.30e-1717
structure with developmental contribution from neural crest6.01e-1692
occipital lobe4.56e-1510
visual cortex4.56e-1510
neocortex4.56e-1510
tube2.25e-11114
basal ganglion2.61e-118
nuclear complex of neuraxis2.61e-118
aggregate regional part of brain2.61e-118
collection of basal ganglia2.61e-118
cerebral subcortex2.61e-118
anatomical conduit1.43e-10122
posterior neural tube3.05e-1012
chordal neural plate3.05e-1012
spinal cord9.14e-086
dorsal region element9.14e-086
dorsum9.14e-086
regional part of midbrain2.96e-074
midbrain2.96e-074
presumptive midbrain2.96e-074
midbrain neural tube2.96e-074
corpus striatum5.53e-075
striatum5.53e-075
ventral part of telencephalon5.53e-075
future corpus striatum5.53e-075
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