Personal tools

FF:11761-123H6: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 69: Line 69:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.93144493675342e-210!GO:0005737;cytoplasm;4.82199969786176e-202!GO:0043226;organelle;3.8518608136677e-157!GO:0043229;intracellular organelle;9.72066843788505e-157!GO:0043231;intracellular membrane-bound organelle;5.23806113384887e-156!GO:0043227;membrane-bound organelle;1.02443221016822e-155!GO:0044444;cytoplasmic part;9.73900018223415e-148!GO:0044422;organelle part;3.30599869513252e-120!GO:0044446;intracellular organelle part;9.95252504378142e-119!GO:0005515;protein binding;1.89752084878122e-83!GO:0032991;macromolecular complex;7.11145588257423e-78!GO:0044238;primary metabolic process;8.99971817765808e-74!GO:0030529;ribonucleoprotein complex;4.49966433617006e-72!GO:0044237;cellular metabolic process;7.55691890838533e-72!GO:0043170;macromolecule metabolic process;8.20162254137719e-65!GO:0005739;mitochondrion;4.92864403716339e-58!GO:0043233;organelle lumen;9.46019336044057e-58!GO:0031974;membrane-enclosed lumen;9.46019336044057e-58!GO:0031090;organelle membrane;1.07617694855333e-56!GO:0003723;RNA binding;6.40869230834922e-54!GO:0019538;protein metabolic process;2.79920411680234e-53!GO:0044428;nuclear part;5.04619109689396e-53!GO:0044260;cellular macromolecule metabolic process;5.21515458249771e-47!GO:0044267;cellular protein metabolic process;2.03267740990728e-46!GO:0015031;protein transport;2.48597612424727e-46!GO:0005840;ribosome;5.00170079890173e-46!GO:0033036;macromolecule localization;7.17882621127995e-46!GO:0005634;nucleus;9.13563883474005e-45!GO:0006412;translation;3.16426593502685e-44!GO:0016043;cellular component organization and biogenesis;4.27000272704913e-44!GO:0045184;establishment of protein localization;6.38272090351736e-44!GO:0009058;biosynthetic process;8.33777083036424e-44!GO:0008104;protein localization;1.61227107258062e-43!GO:0005829;cytosol;1.3290940168062e-41!GO:0003735;structural constituent of ribosome;1.57780283550518e-40!GO:0044429;mitochondrial part;1.68411435203662e-39!GO:0043234;protein complex;2.79011454282344e-38!GO:0044249;cellular biosynthetic process;4.57004000917224e-37!GO:0009059;macromolecule biosynthetic process;4.83980863619161e-37!GO:0031967;organelle envelope;6.61591155951459e-37!GO:0031975;envelope;1.68751415828789e-36!GO:0033279;ribosomal subunit;2.02637898160967e-35!GO:0006396;RNA processing;6.77737933307232e-35!GO:0046907;intracellular transport;1.40209976424628e-34!GO:0031981;nuclear lumen;7.23423072521701e-32!GO:0043283;biopolymer metabolic process;9.04341429278263e-31!GO:0006886;intracellular protein transport;1.55954178166256e-29!GO:0016071;mRNA metabolic process;1.61401535574409e-29!GO:0008380;RNA splicing;8.0548349492717e-29!GO:0005783;endoplasmic reticulum;1.11914421457102e-28!GO:0005740;mitochondrial envelope;5.88083370424012e-27!GO:0012505;endomembrane system;1.63975350746991e-26!GO:0010467;gene expression;2.21863381921571e-26!GO:0065003;macromolecular complex assembly;3.0905985863786e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.10748628117243e-26!GO:0006397;mRNA processing;9.20129045854124e-26!GO:0031966;mitochondrial membrane;2.37109587308013e-25!GO:0019866;organelle inner membrane;3.0140757479028e-24!GO:0022607;cellular component assembly;2.87177629386729e-23!GO:0051649;establishment of cellular localization;5.23392618018536e-23!GO:0051641;cellular localization;6.21797318252877e-23!GO:0005743;mitochondrial inner membrane;8.61370063503156e-23!GO:0006996;organelle organization and biogenesis;1.12344932129766e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.05513375465376e-22!GO:0006119;oxidative phosphorylation;2.53130269109364e-22!GO:0044445;cytosolic part;3.93148486348758e-22!GO:0006457;protein folding;3.20532881407036e-21!GO:0005794;Golgi apparatus;7.5699693592619e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.26378243265498e-21!GO:0043228;non-membrane-bound organelle;9.16363945978737e-21!GO:0043232;intracellular non-membrane-bound organelle;9.16363945978737e-21!GO:0048770;pigment granule;2.61673687104397e-20!GO:0042470;melanosome;2.61673687104397e-20!GO:0044432;endoplasmic reticulum part;7.99377159993175e-20!GO:0005681;spliceosome;1.42642211537656e-19!GO:0044455;mitochondrial membrane part;2.30830458884144e-19!GO:0005654;nucleoplasm;4.11594969816881e-19!GO:0016462;pyrophosphatase activity;1.0313524775675e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.25124412622601e-18!GO:0015934;large ribosomal subunit;1.47114324072103e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.0667022650067e-18!GO:0000166;nucleotide binding;6.49568613679543e-18!GO:0015935;small ribosomal subunit;7.79220588714934e-18!GO:0017111;nucleoside-triphosphatase activity;1.4685328595767e-17!GO:0008134;transcription factor binding;4.21919894586452e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;5.98543598398809e-17!GO:0019941;modification-dependent protein catabolic process;1.19352668020281e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.19352668020281e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.21559211219383e-16!GO:0043285;biopolymer catabolic process;1.36518115817837e-16!GO:0044257;cellular protein catabolic process;1.45231038574566e-16!GO:0030163;protein catabolic process;1.68940391329776e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.71718178662902e-16!GO:0016192;vesicle-mediated transport;4.32237094893572e-16!GO:0005746;mitochondrial respiratory chain;4.42124167106469e-16!GO:0016874;ligase activity;4.62261840745161e-16!GO:0044265;cellular macromolecule catabolic process;4.89349835341762e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.93727244302137e-16!GO:0051186;cofactor metabolic process;7.26810375088435e-16!GO:0022618;protein-RNA complex assembly;1.05656822195519e-15!GO:0048193;Golgi vesicle transport;1.07361798166842e-15!GO:0009057;macromolecule catabolic process;1.51393128242258e-15!GO:0006512;ubiquitin cycle;1.71407990243215e-15!GO:0044451;nucleoplasm part;1.76613634621419e-15!GO:0031980;mitochondrial lumen;1.89022107295675e-15!GO:0005759;mitochondrial matrix;1.89022107295675e-15!GO:0012501;programmed cell death;6.77393042939049e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.77393042939049e-15!GO:0003954;NADH dehydrogenase activity;6.77393042939049e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.77393042939049e-15!GO:0006915;apoptosis;1.8936073969919e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.95680399811249e-14!GO:0051082;unfolded protein binding;2.8413110213554e-14!GO:0043412;biopolymer modification;2.90409903104728e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.16127450527614e-14!GO:0006605;protein targeting;6.0228165380544e-14!GO:0005789;endoplasmic reticulum membrane;6.57464832241987e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.27676601108495e-13!GO:0044248;cellular catabolic process;1.2785836582796e-13!GO:0006464;protein modification process;2.26840502265098e-13!GO:0032553;ribonucleotide binding;2.71233884421235e-13!GO:0032555;purine ribonucleotide binding;2.71233884421235e-13!GO:0007049;cell cycle;3.15768946110145e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.02494500943577e-13!GO:0008219;cell death;4.21518670967305e-13!GO:0016265;death;4.21518670967305e-13!GO:0017076;purine nucleotide binding;4.62633442918251e-13!GO:0005730;nucleolus;5.17161781980386e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.32482447090696e-13!GO:0045271;respiratory chain complex I;5.32482447090696e-13!GO:0005747;mitochondrial respiratory chain complex I;5.32482447090696e-13!GO:0008135;translation factor activity, nucleic acid binding;5.37081308341461e-13!GO:0042775;organelle ATP synthesis coupled electron transport;5.39368073567549e-13!GO:0042773;ATP synthesis coupled electron transport;5.39368073567549e-13!GO:0006259;DNA metabolic process;9.14882483840709e-13!GO:0005793;ER-Golgi intermediate compartment;1.2738174330968e-12!GO:0005761;mitochondrial ribosome;1.46301550867957e-12!GO:0000313;organellar ribosome;1.46301550867957e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.55542773980333e-12!GO:0048523;negative regulation of cellular process;1.70819400640438e-12!GO:0009055;electron carrier activity;1.98473020612783e-12!GO:0006732;coenzyme metabolic process;2.01949542338213e-12!GO:0003924;GTPase activity;6.57823388367203e-12!GO:0003712;transcription cofactor activity;2.22322533292914e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;7.75130623192076e-11!GO:0000375;RNA splicing, via transesterification reactions;7.75130623192076e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.75130623192076e-11!GO:0048519;negative regulation of biological process;9.00390554809287e-11!GO:0005635;nuclear envelope;9.25742969071249e-11!GO:0043687;post-translational protein modification;1.52651187344331e-10!GO:0005768;endosome;2.38848344877748e-10!GO:0043067;regulation of programmed cell death;2.42235917486563e-10!GO:0006413;translational initiation;2.92300677638987e-10!GO:0042981;regulation of apoptosis;3.4020428935187e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.59898917990989e-10!GO:0003743;translation initiation factor activity;4.78564479277092e-10!GO:0006163;purine nucleotide metabolic process;4.7901538668125e-10!GO:0009259;ribonucleotide metabolic process;5.1881545937192e-10!GO:0009150;purine ribonucleotide metabolic process;6.96346182750476e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.2785115228713e-10!GO:0044431;Golgi apparatus part;1.00162799183998e-09!GO:0043069;negative regulation of programmed cell death;1.22218846706031e-09!GO:0006446;regulation of translational initiation;1.23865753332441e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.28691130084872e-09!GO:0003676;nucleic acid binding;1.95052726520406e-09!GO:0031965;nuclear membrane;2.33072711977475e-09!GO:0022402;cell cycle process;2.56109898928677e-09!GO:0016023;cytoplasmic membrane-bound vesicle;2.63122796502394e-09!GO:0031988;membrane-bound vesicle;2.6361887798763e-09!GO:0006164;purine nucleotide biosynthetic process;2.84565665194931e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.78623057403455e-09!GO:0008639;small protein conjugating enzyme activity;3.93871053443974e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.96874859400747e-09!GO:0043066;negative regulation of apoptosis;3.98009358700758e-09!GO:0006461;protein complex assembly;4.26064196041681e-09!GO:0008565;protein transporter activity;4.4385479702553e-09!GO:0006888;ER to Golgi vesicle-mediated transport;4.4452440373863e-09!GO:0005525;GTP binding;4.48445166862068e-09!GO:0009056;catabolic process;5.68039042465468e-09!GO:0016070;RNA metabolic process;6.41417692226161e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.47151599383105e-09!GO:0019787;small conjugating protein ligase activity;6.60143121655035e-09!GO:0004842;ubiquitin-protein ligase activity;6.98228894454461e-09!GO:0009141;nucleoside triphosphate metabolic process;7.77145745348537e-09!GO:0030120;vesicle coat;7.81194433558003e-09!GO:0030662;coated vesicle membrane;7.81194433558003e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.86114785410656e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.96060078510986e-09!GO:0009144;purine nucleoside triphosphate metabolic process;7.96060078510986e-09!GO:0016604;nuclear body;8.03250870445912e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.49399513327583e-09!GO:0009060;aerobic respiration;8.85822072620894e-09!GO:0006916;anti-apoptosis;1.05506608629573e-08!GO:0009260;ribonucleotide biosynthetic process;1.06835093408071e-08!GO:0015986;ATP synthesis coupled proton transport;1.15171722368794e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.15171722368794e-08!GO:0006913;nucleocytoplasmic transport;1.24273814438517e-08!GO:0000074;regulation of progression through cell cycle;1.60038873689503e-08!GO:0048475;coated membrane;1.82003423482938e-08!GO:0030117;membrane coat;1.82003423482938e-08!GO:0051726;regulation of cell cycle;1.86293832027447e-08!GO:0016881;acid-amino acid ligase activity;1.91288725104273e-08!GO:0031982;vesicle;2.11562825312985e-08!GO:0051169;nuclear transport;2.3453206511914e-08!GO:0005524;ATP binding;2.50164674541878e-08!GO:0045333;cellular respiration;2.54066422134975e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.76782245438938e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.76782245438938e-08!GO:0031410;cytoplasmic vesicle;2.86354078349168e-08!GO:0051188;cofactor biosynthetic process;3.29127196764265e-08!GO:0006366;transcription from RNA polymerase II promoter;3.38482268659211e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.43240334129985e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.43240334129985e-08!GO:0051246;regulation of protein metabolic process;3.44974454816086e-08!GO:0005788;endoplasmic reticulum lumen;3.60112906052352e-08!GO:0032559;adenyl ribonucleotide binding;4.3801196895232e-08!GO:0032561;guanyl ribonucleotide binding;4.3801196895232e-08!GO:0019001;guanyl nucleotide binding;4.3801196895232e-08!GO:0044453;nuclear membrane part;5.0866282183695e-08!GO:0042254;ribosome biogenesis and assembly;5.67111375477803e-08!GO:0046034;ATP metabolic process;6.06059953127822e-08!GO:0019829;cation-transporting ATPase activity;7.01557487733737e-08!GO:0000139;Golgi membrane;7.20445471740471e-08!GO:0030554;adenyl nucleotide binding;7.73688110109183e-08!GO:0050794;regulation of cellular process;9.25482315276481e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.21341300167366e-07!GO:0006099;tricarboxylic acid cycle;1.3516349822514e-07!GO:0046356;acetyl-CoA catabolic process;1.3516349822514e-07!GO:0003714;transcription corepressor activity;1.4709487353959e-07!GO:0017038;protein import;1.54324420571923e-07!GO:0016491;oxidoreductase activity;1.6440250395691e-07!GO:0007005;mitochondrion organization and biogenesis;1.78297645845031e-07!GO:0006754;ATP biosynthetic process;2.28831169022144e-07!GO:0006753;nucleoside phosphate metabolic process;2.28831169022144e-07!GO:0051187;cofactor catabolic process;2.80388585575282e-07!GO:0006399;tRNA metabolic process;3.49569874043131e-07!GO:0044440;endosomal part;3.58229520701759e-07!GO:0010008;endosome membrane;3.58229520701759e-07!GO:0006974;response to DNA damage stimulus;3.61196826820331e-07!GO:0016607;nuclear speck;4.05163816730194e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.55307900224425e-07!GO:0005770;late endosome;6.15548967786537e-07!GO:0006084;acetyl-CoA metabolic process;6.78746385879319e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.44397430626302e-07!GO:0004812;aminoacyl-tRNA ligase activity;8.44397430626302e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.44397430626302e-07!GO:0009109;coenzyme catabolic process;9.55275720213874e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.05833606306413e-06!GO:0016564;transcription repressor activity;1.09038697789722e-06!GO:0043038;amino acid activation;1.09661945453016e-06!GO:0006418;tRNA aminoacylation for protein translation;1.09661945453016e-06!GO:0043039;tRNA aminoacylation;1.09661945453016e-06!GO:0007243;protein kinase cascade;1.1013520584209e-06!GO:0009117;nucleotide metabolic process;1.56778360687104e-06!GO:0016853;isomerase activity;1.59927962923607e-06!GO:0009108;coenzyme biosynthetic process;1.73688951611987e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.77307467681385e-06!GO:0000278;mitotic cell cycle;1.83673379262722e-06!GO:0006793;phosphorus metabolic process;2.05654302649152e-06!GO:0006796;phosphate metabolic process;2.05654302649152e-06!GO:0031252;leading edge;2.11007008838076e-06!GO:0008654;phospholipid biosynthetic process;2.1555440180898e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.63603173991589e-06!GO:0048522;positive regulation of cellular process;2.83839680189928e-06!GO:0045786;negative regulation of progression through cell cycle;2.84119054705703e-06!GO:0016787;hydrolase activity;2.87952506854553e-06!GO:0016887;ATPase activity;3.01929850576944e-06!GO:0004298;threonine endopeptidase activity;3.90645862522821e-06!GO:0042623;ATPase activity, coupled;3.97979405019135e-06!GO:0045259;proton-transporting ATP synthase complex;4.65583357040212e-06!GO:0005773;vacuole;5.13010886482065e-06!GO:0005798;Golgi-associated vesicle;5.31258424212645e-06!GO:0006752;group transfer coenzyme metabolic process;5.54767444381985e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;5.59170542303716e-06!GO:0016740;transferase activity;5.74411732214292e-06!GO:0006613;cotranslational protein targeting to membrane;5.78405822552786e-06!GO:0008026;ATP-dependent helicase activity;7.14013279168064e-06!GO:0045454;cell redox homeostasis;8.26190899295058e-06!GO:0004386;helicase activity;8.65622656211853e-06!GO:0005643;nuclear pore;9.81289790895556e-06!GO:0016563;transcription activator activity;1.08922663551169e-05!GO:0065002;intracellular protein transport across a membrane;1.12103572386679e-05!GO:0005769;early endosome;1.14043325027427e-05!GO:0032446;protein modification by small protein conjugation;1.21666549734516e-05!GO:0051789;response to protein stimulus;1.2636476372815e-05!GO:0006986;response to unfolded protein;1.2636476372815e-05!GO:0006323;DNA packaging;1.40655209190789e-05!GO:0016310;phosphorylation;1.43313040219707e-05!GO:0051170;nuclear import;1.48012651381905e-05!GO:0016126;sterol biosynthetic process;1.74534812795166e-05!GO:0006281;DNA repair;1.78811562401679e-05!GO:0016567;protein ubiquitination;1.93760109948609e-05!GO:0000245;spliceosome assembly;2.04031897709358e-05!GO:0005905;coated pit;2.05969598421635e-05!GO:0008361;regulation of cell size;2.08331340768831e-05!GO:0006091;generation of precursor metabolites and energy;2.11077764011247e-05!GO:0050789;regulation of biological process;2.40528734838758e-05!GO:0007264;small GTPase mediated signal transduction;2.41257585984702e-05!GO:0006606;protein import into nucleus;2.48841726999275e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.54651393821108e-05!GO:0030867;rough endoplasmic reticulum membrane;2.68959695114224e-05!GO:0051276;chromosome organization and biogenesis;2.70073436043588e-05!GO:0016049;cell growth;3.1888370941197e-05!GO:0031324;negative regulation of cellular metabolic process;3.53525468839759e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.65983895129416e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.83008185979997e-05!GO:0016859;cis-trans isomerase activity;4.10003256313407e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.1532206337217e-05!GO:0030133;transport vesicle;4.92055565294753e-05!GO:0008610;lipid biosynthetic process;5.03556616052668e-05!GO:0006612;protein targeting to membrane;5.07001371541496e-05!GO:0033116;ER-Golgi intermediate compartment membrane;5.20559252396082e-05!GO:0015630;microtubule cytoskeleton;5.40577691474919e-05!GO:0043623;cellular protein complex assembly;6.38009629989171e-05!GO:0000323;lytic vacuole;6.42765274497528e-05!GO:0005764;lysosome;6.42765274497528e-05!GO:0005667;transcription factor complex;6.46582417599779e-05!GO:0043566;structure-specific DNA binding;7.11977028163638e-05!GO:0006364;rRNA processing;7.57350879819646e-05!GO:0030659;cytoplasmic vesicle membrane;7.80080072071953e-05!GO:0005762;mitochondrial large ribosomal subunit;7.87979928705022e-05!GO:0000315;organellar large ribosomal subunit;7.87979928705022e-05!GO:0005791;rough endoplasmic reticulum;7.91341997658148e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.02362078733583e-05!GO:0003713;transcription coactivator activity;8.59956872212708e-05!GO:0009719;response to endogenous stimulus;9.4723323329214e-05!GO:0051427;hormone receptor binding;9.49657900148893e-05!GO:0065004;protein-DNA complex assembly;9.65225737204564e-05!GO:0001558;regulation of cell growth;9.94292966342129e-05!GO:0046930;pore complex;0.000116099458572489!GO:0003697;single-stranded DNA binding;0.000121447803034166!GO:0016072;rRNA metabolic process;0.000123100625371554!GO:0019899;enzyme binding;0.000137397863258609!GO:0000151;ubiquitin ligase complex;0.000148190503091533!GO:0016044;membrane organization and biogenesis;0.000148950580972583!GO:0051301;cell division;0.000153894201230129!GO:0044433;cytoplasmic vesicle part;0.000157638651404488!GO:0044262;cellular carbohydrate metabolic process;0.000164715924454308!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000167754031194555!GO:0006403;RNA localization;0.000175031588654045!GO:0003724;RNA helicase activity;0.000188481935824215!GO:0050657;nucleic acid transport;0.00018939366656213!GO:0051236;establishment of RNA localization;0.00018939366656213!GO:0050658;RNA transport;0.00018939366656213!GO:0009892;negative regulation of metabolic process;0.000193139339804643!GO:0035257;nuclear hormone receptor binding;0.000193157004069266!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000194928538581568!GO:0048468;cell development;0.000195254821865441!GO:0016568;chromatin modification;0.00020976274035588!GO:0043021;ribonucleoprotein binding;0.000217885917599592!GO:0006333;chromatin assembly or disassembly;0.000240381145517311!GO:0004576;oligosaccharyl transferase activity;0.000259680034614468!GO:0006695;cholesterol biosynthetic process;0.000261228217285564!GO:0031968;organelle outer membrane;0.000266275583899537!GO:0005885;Arp2/3 protein complex;0.000283764532164519!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000320539097281521!GO:0065009;regulation of a molecular function;0.000326310650032007!GO:0008250;oligosaccharyl transferase complex;0.000326310650032007!GO:0019867;outer membrane;0.00034715368366182!GO:0005694;chromosome;0.00034715368366182!GO:0030029;actin filament-based process;0.00034715368366182!GO:0012506;vesicle membrane;0.000383979427884225!GO:0046467;membrane lipid biosynthetic process;0.00040062194061858!GO:0009967;positive regulation of signal transduction;0.000415812159286036!GO:0016779;nucleotidyltransferase activity;0.000456659104885402!GO:0018196;peptidyl-asparagine modification;0.000457783964506726!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000457783964506726!GO:0005048;signal sequence binding;0.000479040457972268!GO:0048518;positive regulation of biological process;0.000487855409077518!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000502816235492311!GO:0046474;glycerophospholipid biosynthetic process;0.000520766699934914!GO:0000314;organellar small ribosomal subunit;0.000541859858883763!GO:0005763;mitochondrial small ribosomal subunit;0.000541859858883763!GO:0030663;COPI coated vesicle membrane;0.000563223449817641!GO:0030126;COPI vesicle coat;0.000563223449817641!GO:0005813;centrosome;0.000564493340572471!GO:0048471;perinuclear region of cytoplasm;0.000597296538936455!GO:0000785;chromatin;0.000637464447537389!GO:0030658;transport vesicle membrane;0.000760049841773152!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000769262617992569!GO:0051920;peroxiredoxin activity;0.000793968243568364!GO:0044427;chromosomal part;0.000793968243568364!GO:0007050;cell cycle arrest;0.000794638882427965!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000821252072568254!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000831919834977068!GO:0000087;M phase of mitotic cell cycle;0.000853056584708256!GO:0007010;cytoskeleton organization and biogenesis;0.000916688900409034!GO:0030118;clathrin coat;0.000934093158188043!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000943656908153279!GO:0008092;cytoskeletal protein binding;0.00098077667321663!GO:0007067;mitosis;0.00102621197978606!GO:0022403;cell cycle phase;0.00103513478633344!GO:0042802;identical protein binding;0.00108273983952429!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00113038079403396!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00121082400798854!GO:0019843;rRNA binding;0.00121937921077273!GO:0006260;DNA replication;0.0012972752603047!GO:0008047;enzyme activator activity;0.0012972752603047!GO:0006891;intra-Golgi vesicle-mediated transport;0.00131433374143837!GO:0006650;glycerophospholipid metabolic process;0.00134022313451822!GO:0016481;negative regulation of transcription;0.00134453659341465!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00137636984216818!GO:0005741;mitochondrial outer membrane;0.00142133931330059!GO:0016197;endosome transport;0.00144164944428193!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00149719706776257!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00149719706776257!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00149719706776257!GO:0006839;mitochondrial transport;0.00158097971385109!GO:0048500;signal recognition particle;0.00158414928979143!GO:0005815;microtubule organizing center;0.00165795187615426!GO:0045045;secretory pathway;0.00169590951065276!GO:0030137;COPI-coated vesicle;0.00175458644420432!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00181162906786993!GO:0030176;integral to endoplasmic reticulum membrane;0.00188195287608395!GO:0001726;ruffle;0.00202030514952425!GO:0051028;mRNA transport;0.00202030514952425!GO:0035258;steroid hormone receptor binding;0.00206037617731451!GO:0030132;clathrin coat of coated pit;0.00207642839178237!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00234123035890617!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00239959323960629!GO:0008632;apoptotic program;0.0024757914085291!GO:0009165;nucleotide biosynthetic process;0.00249400695275706!GO:0016363;nuclear matrix;0.00268528853257796!GO:0031901;early endosome membrane;0.00279303626233745!GO:0030660;Golgi-associated vesicle membrane;0.00279317182810746!GO:0030134;ER to Golgi transport vesicle;0.00279970327995427!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00283423419170305!GO:0031072;heat shock protein binding;0.00297991232877781!GO:0043681;protein import into mitochondrion;0.00320250704431065!GO:0008243;plasminogen activator activity;0.00329671395000273!GO:0007242;intracellular signaling cascade;0.00356156995224983!GO:0006643;membrane lipid metabolic process;0.00367830904624979!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00378343577804397!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00378343577804397!GO:0045047;protein targeting to ER;0.00378343577804397!GO:0046489;phosphoinositide biosynthetic process;0.00378343749313788!GO:0003729;mRNA binding;0.00378343749313788!GO:0006414;translational elongation;0.00387192347249966!GO:0006979;response to oxidative stress;0.00405744993891809!GO:0008186;RNA-dependent ATPase activity;0.00405744993891809!GO:0043065;positive regulation of apoptosis;0.00423577371298775!GO:0015992;proton transport;0.00429546988766543!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00434604261762741!GO:0065007;biological regulation;0.00441096433104209!GO:0003899;DNA-directed RNA polymerase activity;0.0044994931451598!GO:0030027;lamellipodium;0.00453690459749281!GO:0030127;COPII vesicle coat;0.00458911886964189!GO:0012507;ER to Golgi transport vesicle membrane;0.00458911886964189!GO:0006626;protein targeting to mitochondrion;0.00467469254426272!GO:0006818;hydrogen transport;0.00470700450113108!GO:0032940;secretion by cell;0.00471216430066658!GO:0051252;regulation of RNA metabolic process;0.00474873995605079!GO:0040008;regulation of growth;0.00483292278713645!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00498270470478882!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00498270470478882!GO:0006334;nucleosome assembly;0.00513288506705294!GO:0003690;double-stranded DNA binding;0.00522313914311259!GO:0030119;AP-type membrane coat adaptor complex;0.00524394978302125!GO:0043068;positive regulation of programmed cell death;0.00543960811233001!GO:0030521;androgen receptor signaling pathway;0.00548328526636348!GO:0030125;clathrin vesicle coat;0.00548818190336214!GO:0030665;clathrin coated vesicle membrane;0.00548818190336214!GO:0006509;membrane protein ectodomain proteolysis;0.00550481532607795!GO:0033619;membrane protein proteolysis;0.00550481532607795!GO:0017166;vinculin binding;0.00552407398923366!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00574958525667517!GO:0051287;NAD binding;0.00575723826135515!GO:0031902;late endosome membrane;0.00602671737326955!GO:0051329;interphase of mitotic cell cycle;0.00631915321708983!GO:0016860;intramolecular oxidoreductase activity;0.00631915321708983!GO:0022406;membrane docking;0.00642756326394021!GO:0048278;vesicle docking;0.00642756326394021!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00645353376138518!GO:0031543;peptidyl-proline dioxygenase activity;0.00645353376138518!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00654345044747925!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00654345044747925!GO:0033673;negative regulation of kinase activity;0.00681217668565997!GO:0006469;negative regulation of protein kinase activity;0.00681217668565997!GO:0031418;L-ascorbic acid binding;0.00681234663576554!GO:0046519;sphingoid metabolic process;0.00692130479374009!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00700185422881482!GO:0043284;biopolymer biosynthetic process;0.00703651581169107!GO:0007006;mitochondrial membrane organization and biogenesis;0.0072337530377251!GO:0008312;7S RNA binding;0.00743207349081355!GO:0046483;heterocycle metabolic process;0.00753635041012558!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00755680823375525!GO:0030384;phosphoinositide metabolic process;0.00785852098694422!GO:0043433;negative regulation of transcription factor activity;0.0079168166978783!GO:0005869;dynactin complex;0.00816636673921328!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00817347563909573!GO:0015399;primary active transmembrane transporter activity;0.00817347563909573!GO:0043488;regulation of mRNA stability;0.00817745711559637!GO:0043487;regulation of RNA stability;0.00817745711559637!GO:0051325;interphase;0.00835245330242114!GO:0045893;positive regulation of transcription, DNA-dependent;0.0083666902285215!GO:0006904;vesicle docking during exocytosis;0.0083666902285215!GO:0006740;NADPH regeneration;0.00843910647180374!GO:0006098;pentose-phosphate shunt;0.00843910647180374!GO:0006595;polyamine metabolic process;0.0085779410441108!GO:0008180;signalosome;0.00871506097094524!GO:0008139;nuclear localization sequence binding;0.00874680890378528!GO:0051087;chaperone binding;0.00895536117133972!GO:0051348;negative regulation of transferase activity;0.00907077104810184!GO:0005684;U2-dependent spliceosome;0.00913086628904586!GO:0048487;beta-tubulin binding;0.00926512767010202!GO:0050681;androgen receptor binding;0.00927033241517248!GO:0051270;regulation of cell motility;0.00940843693747589!GO:0004004;ATP-dependent RNA helicase activity;0.00956919471744338!GO:0051101;regulation of DNA binding;0.00960272152350503!GO:0045941;positive regulation of transcription;0.00964982708566653!GO:0030131;clathrin adaptor complex;0.00968138922205302!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00970227201829229!GO:0031497;chromatin assembly;0.00991607053610239!GO:0006778;porphyrin metabolic process;0.0100564186804337!GO:0033013;tetrapyrrole metabolic process;0.0100564186804337!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0103388218633661!GO:0019798;procollagen-proline dioxygenase activity;0.0104688546311469!GO:0003746;translation elongation factor activity;0.0105587695008235!GO:0006672;ceramide metabolic process;0.0105587695008235!GO:0000339;RNA cap binding;0.0108176598731563!GO:0030433;ER-associated protein catabolic process;0.0108496105724306!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0108496105724306!GO:0006892;post-Golgi vesicle-mediated transport;0.0109393671101503!GO:0015631;tubulin binding;0.0109463609977535!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0109994354103837!GO:0006383;transcription from RNA polymerase III promoter;0.0112463662641166!GO:0050790;regulation of catalytic activity;0.012299969631726!GO:0051168;nuclear export;0.0123684983835717!GO:0005096;GTPase activator activity;0.0124584802650151!GO:0006007;glucose catabolic process;0.0128520983822047!GO:0008637;apoptotic mitochondrial changes;0.0131032762066366!GO:0005862;muscle thin filament tropomyosin;0.0132425313388439!GO:0043022;ribosome binding;0.0132810836799208!GO:0001516;prostaglandin biosynthetic process;0.013648011261677!GO:0046457;prostanoid biosynthetic process;0.013648011261677!GO:0030032;lamellipodium biogenesis;0.0140122112375422!GO:0007040;lysosome organization and biogenesis;0.0140122112375422!GO:0000096;sulfur amino acid metabolic process;0.0140351694005889!GO:0007034;vacuolar transport;0.0140417355710341!GO:0006739;NADP metabolic process;0.0145085306472248!GO:0016408;C-acyltransferase activity;0.0149829504776963!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0152697764359443!GO:0007030;Golgi organization and biogenesis;0.01531075095588!GO:0045936;negative regulation of phosphate metabolic process;0.015335780097249!GO:0019752;carboxylic acid metabolic process;0.015335780097249!GO:0045792;negative regulation of cell size;0.015335780097249!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0154099379847281!GO:0006082;organic acid metabolic process;0.0155167317209045!GO:0016272;prefoldin complex;0.0158622374814584!GO:0030308;negative regulation of cell growth;0.0159107915222409!GO:0006769;nicotinamide metabolic process;0.0159751321299217!GO:0031529;ruffle organization and biogenesis;0.0160034715401701!GO:0005832;chaperonin-containing T-complex;0.016178838112767!GO:0006644;phospholipid metabolic process;0.0163283567513438!GO:0022890;inorganic cation transmembrane transporter activity;0.0163650134011515!GO:0006984;ER-nuclear signaling pathway;0.0167729363485011!GO:0006720;isoprenoid metabolic process;0.0168437650614364!GO:0051128;regulation of cellular component organization and biogenesis;0.0171735199650864!GO:0030041;actin filament polymerization;0.0172486355635607!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0172486355635607!GO:0015002;heme-copper terminal oxidase activity;0.0172486355635607!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0172486355635607!GO:0004129;cytochrome-c oxidase activity;0.0172486355635607!GO:0004177;aminopeptidase activity;0.0175208410675698!GO:0051540;metal cluster binding;0.0175208410675698!GO:0051536;iron-sulfur cluster binding;0.0175208410675698!GO:0042168;heme metabolic process;0.0179563596349589!GO:0040011;locomotion;0.0182323780499437!GO:0007033;vacuole organization and biogenesis;0.0182786532427678!GO:0000059;protein import into nucleus, docking;0.0184372978103863!GO:0051272;positive regulation of cell motility;0.0184392555274736!GO:0040017;positive regulation of locomotion;0.0184392555274736!GO:0000209;protein polyubiquitination;0.0185579200133636!GO:0031625;ubiquitin protein ligase binding;0.0192100636654344!GO:0006790;sulfur metabolic process;0.0192100636654344!GO:0030518;steroid hormone receptor signaling pathway;0.0193651799222758!GO:0016125;sterol metabolic process;0.0193946889208206!GO:0005774;vacuolar membrane;0.0197243732901165!GO:0006417;regulation of translation;0.0198696561081171!GO:0008234;cysteine-type peptidase activity;0.0200960144817664!GO:0000049;tRNA binding;0.0202977254167587!GO:0016251;general RNA polymerase II transcription factor activity;0.0203277359886477!GO:0040012;regulation of locomotion;0.0204094603602578!GO:0006950;response to stress;0.0204226450275758!GO:0007021;tubulin folding;0.0204475832444537!GO:0006402;mRNA catabolic process;0.0205890803864041!GO:0051090;regulation of transcription factor activity;0.0215896377864901!GO:0004674;protein serine/threonine kinase activity;0.0219733799174755!GO:0003756;protein disulfide isomerase activity;0.0221071080491662!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0221071080491662!GO:0030833;regulation of actin filament polymerization;0.0230161875058111!GO:0030880;RNA polymerase complex;0.0231852669208397!GO:0005637;nuclear inner membrane;0.0233122201799617!GO:0000279;M phase;0.0233478583234405!GO:0050662;coenzyme binding;0.0233932459386253!GO:0044255;cellular lipid metabolic process;0.0237331862375108!GO:0006897;endocytosis;0.0239605604496225!GO:0010324;membrane invagination;0.0239605604496225!GO:0006497;protein amino acid lipidation;0.0239605604496225!GO:0006767;water-soluble vitamin metabolic process;0.0239605604496225!GO:0031301;integral to organelle membrane;0.0243099105390054!GO:0046426;negative regulation of JAK-STAT cascade;0.0251468736104827!GO:0030031;cell projection biogenesis;0.0256823401367461!GO:0006917;induction of apoptosis;0.0259799727968745!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0261049626686462!GO:0009966;regulation of signal transduction;0.0266878729464744!GO:0008283;cell proliferation;0.0273114055211862!GO:0006066;alcohol metabolic process;0.0274469874771005!GO:0004860;protein kinase inhibitor activity;0.0275253643382923!GO:0035035;histone acetyltransferase binding;0.028175138513118!GO:0050811;GABA receptor binding;0.0281979147814368!GO:0003711;transcription elongation regulator activity;0.0287772499236567!GO:0030145;manganese ion binding;0.0288709079140387!GO:0006352;transcription initiation;0.0289074093135547!GO:0051059;NF-kappaB binding;0.0289074093135547!GO:0045892;negative regulation of transcription, DNA-dependent;0.0292051762906525!GO:0005586;collagen type III;0.0299053145666551!GO:0005874;microtubule;0.0300238381341775!GO:0019318;hexose metabolic process;0.0312094398275294!GO:0007265;Ras protein signal transduction;0.0326484214985639!GO:0031124;mRNA 3'-end processing;0.0334819129023602!GO:0004287;prolyl oligopeptidase activity;0.0335952725631366!GO:0051539;4 iron, 4 sulfur cluster binding;0.0336493785708979!GO:0030503;regulation of cell redox homeostasis;0.0336493785708979!GO:0042326;negative regulation of phosphorylation;0.0338830572167695!GO:0012502;induction of programmed cell death;0.0340391129857678!GO:0008033;tRNA processing;0.0341517506089941!GO:0005581;collagen;0.0342185026699896!GO:0006779;porphyrin biosynthetic process;0.0348443387844896!GO:0033014;tetrapyrrole biosynthetic process;0.0348443387844896!GO:0030508;thiol-disulfide exchange intermediate activity;0.0350663751988696!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0362921057522423!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0362921057522423!GO:0008154;actin polymerization and/or depolymerization;0.0366953542995831!GO:0030149;sphingolipid catabolic process;0.0375206883275113!GO:0016584;nucleosome positioning;0.0375213318916889!GO:0033559;unsaturated fatty acid metabolic process;0.0385654801785167!GO:0006636;unsaturated fatty acid biosynthetic process;0.0385654801785167!GO:0031371;ubiquitin conjugating enzyme complex;0.0386748697586657!GO:0005996;monosaccharide metabolic process;0.0389433448342282!GO:0043492;ATPase activity, coupled to movement of substances;0.0392267807146887!GO:0006506;GPI anchor biosynthetic process;0.0394391508859057!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0396810203117845!GO:0000428;DNA-directed RNA polymerase complex;0.0396810203117845!GO:0004448;isocitrate dehydrogenase activity;0.0397513983125237!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0399069411603261!GO:0008652;amino acid biosynthetic process;0.0400174868934733!GO:0051098;regulation of binding;0.0400778388067636!GO:0008538;proteasome activator activity;0.0403662239609785!GO:0005784;translocon complex;0.0404240721624675!GO:0005100;Rho GTPase activator activity;0.0408423594018546!GO:0004722;protein serine/threonine phosphatase activity;0.0411603763950865!GO:0006693;prostaglandin metabolic process;0.0420197746300849!GO:0006692;prostanoid metabolic process;0.0420197746300849!GO:0022408;negative regulation of cell-cell adhesion;0.042340881994766!GO:0005801;cis-Golgi network;0.0424021536660127!GO:0006520;amino acid metabolic process;0.0428521050023335!GO:0006733;oxidoreduction coenzyme metabolic process;0.0436324388803764!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0436626186943593!GO:0006289;nucleotide-excision repair;0.0439400044917822!GO:0030911;TPR domain binding;0.0440527665106078!GO:0019362;pyridine nucleotide metabolic process;0.0444349567894072!GO:0001952;regulation of cell-matrix adhesion;0.0452357731506798!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0452357731506798!GO:0051092;activation of NF-kappaB transcription factor;0.0453547628242158!GO:0006505;GPI anchor metabolic process;0.0456774970558153!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0457319553221402!GO:0007041;lysosomal transport;0.0457319553221402!GO:0005938;cell cortex;0.0457319553221402!GO:0006354;RNA elongation;0.0457319553221402!GO:0044437;vacuolar part;0.0458516899602946!GO:0004721;phosphoprotein phosphatase activity;0.0459207802044441!GO:0048144;fibroblast proliferation;0.0461568362207449!GO:0048145;regulation of fibroblast proliferation;0.0461568362207449!GO:0006458;'de novo' protein folding;0.0466120641061577!GO:0051084;'de novo' posttranslational protein folding;0.0466120641061577!GO:0008097;5S rRNA binding;0.0466120641061577!GO:0006611;protein export from nucleus;0.0477369863726232!GO:0046822;regulation of nucleocytoplasmic transport;0.0477920213064996!GO:0030100;regulation of endocytosis;0.048078814647839!GO:0009225;nucleotide-sugar metabolic process;0.0482833434269003!GO:0016791;phosphoric monoester hydrolase activity;0.0487652350627332!GO:0016301;kinase activity;0.0488475463725552!GO:0005975;carbohydrate metabolic process;0.0490698134545207!GO:0005765;lysosomal membrane;0.0495593565521061
|sample_id=11761
|sample_id=11761
|sample_note=
|sample_note=

Revision as of 19:34, 25 June 2012


Name:mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02)
Species:Human (Homo sapiens)
Library ID:{{{library_id}}}
Sample type:{{{sample_category}}}
Genomic View: UCSC
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueovary
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0676
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.182
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0443
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0825
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.071
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.317
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.112
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0624
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0.0443
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.408
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0453
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0845
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0845
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.0443
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0845
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.302
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.138
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0845
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0123
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.451
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.54
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.766
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.467
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.00789
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.626
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data no result for this sample


TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12377

Jaspar motifP-value
MA0002.20.17
MA0003.10.661
MA0004.10.446
MA0006.10.208
MA0007.10.959
MA0009.10.298
MA0014.10.751
MA0017.10.236
MA0018.24.47309e-4
MA0019.10.299
MA0024.11.60661e-6
MA0025.10.652
MA0027.10.722
MA0028.10.124
MA0029.10.144
MA0030.10.456
MA0031.10.34
MA0035.20.843
MA0038.10.19
MA0039.20.803
MA0040.10.425
MA0041.10.5
MA0042.10.662
MA0043.10.426
MA0046.10.0675
MA0047.20.675
MA0048.10.341
MA0050.10.0356
MA0051.10.325
MA0052.10.00286
MA0055.10.24
MA0057.10.437
MA0058.10.553
MA0059.10.84
MA0060.10.00162
MA0061.10.221
MA0062.26.23018e-5
MA0065.20.00772
MA0066.10.728
MA0067.10.175
MA0068.10.959
MA0069.10.37
MA0070.10.402
MA0071.10.11
MA0072.10.228
MA0073.10.883
MA0074.10.362
MA0076.10.00717
MA0077.10.623
MA0078.10.712
MA0079.20.792
MA0080.24.64408e-8
MA0081.10.00178
MA0083.10.0157
MA0084.10.693
MA0087.10.632
MA0088.10.0487
MA0090.10.00314
MA0091.10.601
MA0092.10.998
MA0093.10.862
MA0099.23.28217e-12
MA0100.10.067
MA0101.10.0343
MA0102.20.513
MA0103.10.0403
MA0104.20.0299
MA0105.10.707
MA0106.10.164
MA0107.10.00411
MA0108.20.107
MA0111.10.217
MA0112.20.741
MA0113.10.84
MA0114.10.0525
MA0115.10.158
MA0116.10.223
MA0117.10.94
MA0119.10.67
MA0122.10.429
MA0124.10.0116
MA0125.10.19
MA0131.10.296
MA0135.10.0582
MA0136.11.71941e-8
MA0137.20.778
MA0138.20.394
MA0139.10.685
MA0140.10.677
MA0141.10.0465
MA0142.10.394
MA0143.10.678
MA0144.10.648
MA0145.10.502
MA0146.10.62
MA0147.10.0444
MA0148.10.633
MA0149.10.335
MA0150.10.0404
MA0152.10.0144
MA0153.10.901
MA0154.10.94
MA0155.10.125
MA0156.11.7404e-4
MA0157.10.19
MA0159.10.285
MA0160.10.00802
MA0162.10.0446
MA0163.10.523
MA0164.10.455
MA0258.10.538
MA0259.10.177



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12377

Novel motifP-value
10.238
100.09
1000.666
1010.529
1020.0946
1030.777
1040.903
1050.453
1060.16
1070.499
1080.673
1090.228
110.735
1100.341
1110.0408
1120.78
1130.00182
1140.789
1150.339
1160.506
1170.473
1180.791
1190.365
120.187
1200.15
1210.794
1220.164
1234.9331e-5
1240.116
1250.326
1260.733
1270.773
1280.735
1290.791
130.694
1300.768
1310.363
1320.549
1330.413
1340.726
1350.348
1360.738
1370.37
1380.937
1390.423
140.299
1400.73
1410.396
1420.381
1430.795
1440.759
1450.698
1460.917
1470.106
1480.572
1490.466
150.836
1500.41
1510.639
1520.0321
1530.914
1540.944
1550.00188
1560.163
1570.976
1580.00421
1590.383
160.126
1600.736
1610.656
1620.84
1630.0437
1640.297
1650.95
1660.484
1670.0791
1680.672
1690.306
170.945
180.404
190.715
20.352
200.76
210.994
220.942
230.0459
240.997
250.0366
260.611
270.993
280.871
290.635
30.556
300.549
310.929
322.89137e-7
330.876
340.919
350.413
360.0231
370.147
380.167
390.129
40.11
400.154
410.223
420.267
430.561
440.934
450.949
460.52
470.135
480.59
490.00856
50.586
500.899
510.847
520.748
530.026
540.904
550.164
560.47
570.456
580.0765
590.977
60.732
600.838
610.439
620.225
630.881
640.556
650.867
660.416
670.901
680.47
690.176
70.0665
700.427
710.422
720.213
730.105
740.354
750.742
760.677
770.0793
780.0545
790.0104
80.758
800.73
810.267
820.77
830.824
840.76
850.321
860.937
870.341
880.962
890.724
90.725
900.181
910.871
920.733
930.812
940.927
950.794
960.356
970.221
986.27279e-4
990.12



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12377


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000926 (mesoderm)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0000990 (reproductive system)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0001048 (primordium)
0006598 (presumptive structure)
0003886 (body cavity precursor)
0004176 (external genitalia)
0002532 (epiblast (generic))
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)
0009196 (indifferent external genitalia)
0009117 (indifferent gonad)
0006603 (presumptive mesoderm)
0005564 (gonad primordium)

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FF:11761-123H6&oldid=1834712"