FF:11212-116A6: Difference between revisions

Revision as of 17:58, 29 June 2012

Name:	Smooth Muscle Cells - Umbilical artery, donor0
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	umbilical artery
dev stage	NA
sex	NA
age	NA
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	CA252-R10n
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.166
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.213
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.497
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-8.507621e-4
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.371
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.285
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.132
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.262
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.187
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0508
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.132
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0385
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.109
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0892
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.132
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.132
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.445
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.91
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.385
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.445
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10839

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.136
MA0003.1	MA0003.1	0.301
MA0004.1	MA0004.1	0.793
MA0006.1	MA0006.1	0.178
MA0007.1	MA0007.1	0.161
MA0009.1	MA0009.1	0.497
MA0014.1	MA0014.1	0.8
MA0017.1	MA0017.1	0.362
MA0018.2	MA0018.2	0.00665
MA0019.1	MA0019.1	0.307
MA0024.1	MA0024.1	4.3323e-7
MA0025.1	MA0025.1	0.651
MA0027.1	MA0027.1	0.689
MA0028.1	MA0028.1	0.839
MA0029.1	MA0029.1	0.0928
MA0030.1	MA0030.1	0.744
MA0031.1	MA0031.1	0.102
MA0035.2	MA0035.2	0.182
MA0038.1	MA0038.1	0.195
MA0039.2	MA0039.2	0.563
MA0040.1	MA0040.1	0.462
MA0041.1	MA0041.1	0.327
MA0042.1	MA0042.1	0.573
MA0043.1	MA0043.1	0.0592
MA0046.1	MA0046.1	0.725
MA0047.2	MA0047.2	0.692
MA0048.1	MA0048.1	0.187
MA0050.1	MA0050.1	2.65088e-8
MA0051.1	MA0051.1	0.00997
MA0052.1	MA0052.1	0.437
MA0055.1	MA0055.1	0.417
MA0057.1	MA0057.1	0.334
MA0058.1	MA0058.1	0.504
MA0059.1	MA0059.1	0.196
MA0060.1	MA0060.1	0.00814
MA0061.1	MA0061.1	0.305
MA0062.2	MA0062.2	0.0869
MA0065.2	MA0065.2	0.166
MA0066.1	MA0066.1	0.169
MA0067.1	MA0067.1	0.0424
MA0068.1	MA0068.1	0.293
MA0069.1	MA0069.1	0.64
MA0070.1	MA0070.1	0.647
MA0071.1	MA0071.1	0.7
MA0072.1	MA0072.1	0.251
MA0073.1	MA0073.1	0.507
MA0074.1	MA0074.1	0.11
MA0076.1	MA0076.1	0.364
MA0077.1	MA0077.1	0.122
MA0078.1	MA0078.1	0.175
MA0079.2	MA0079.2	0.809
MA0080.2	MA0080.2	0.00233
MA0081.1	MA0081.1	0.192
MA0083.1	MA0083.1	6.0777e-9
MA0084.1	MA0084.1	0.593
MA0087.1	MA0087.1	0.715
MA0088.1	MA0088.1	0.537
MA0090.1	MA0090.1	0.00109
MA0091.1	MA0091.1	0.27
MA0092.1	MA0092.1	0.0862
MA0093.1	MA0093.1	0.727
MA0099.2	MA0099.2	5.26292e-13
MA0100.1	MA0100.1	0.218
MA0101.1	MA0101.1	0.467
MA0102.2	MA0102.2	0.0423
MA0103.1	MA0103.1	0.665
MA0104.2	MA0104.2	0.431
MA0105.1	MA0105.1	0.23
MA0106.1	MA0106.1	0.00697
MA0107.1	MA0107.1	0.283
MA0108.2	MA0108.2	8.27421e-4
MA0111.1	MA0111.1	0.105
MA0112.2	MA0112.2	0.00141
MA0113.1	MA0113.1	0.283
MA0114.1	MA0114.1	0.404
MA0115.1	MA0115.1	0.635
MA0116.1	MA0116.1	0.242
MA0117.1	MA0117.1	0.959
MA0119.1	MA0119.1	0.0653
MA0122.1	MA0122.1	0.978
MA0124.1	MA0124.1	0.602
MA0125.1	MA0125.1	0.465
MA0131.1	MA0131.1	0.474
MA0135.1	MA0135.1	0.552
MA0136.1	MA0136.1	0.0923
MA0137.2	MA0137.2	0.06
MA0138.2	MA0138.2	0.8
MA0139.1	MA0139.1	0.514
MA0140.1	MA0140.1	0.228
MA0141.1	MA0141.1	0.406
MA0142.1	MA0142.1	0.989
MA0143.1	MA0143.1	0.633
MA0144.1	MA0144.1	0.643
MA0145.1	MA0145.1	0.0934
MA0146.1	MA0146.1	0.361
MA0147.1	MA0147.1	0.767
MA0148.1	MA0148.1	0.267
MA0149.1	MA0149.1	0.417
MA0150.1	MA0150.1	0.0481
MA0152.1	MA0152.1	0.896
MA0153.1	MA0153.1	0.947
MA0154.1	MA0154.1	0.0887
MA0155.1	MA0155.1	0.0982
MA0156.1	MA0156.1	0.761
MA0157.1	MA0157.1	0.505
MA0159.1	MA0159.1	0.289
MA0160.1	MA0160.1	0.562
MA0162.1	MA0162.1	0.0316
MA0163.1	MA0163.1	0.0024
MA0164.1	MA0164.1	0.593
MA0258.1	MA0258.1	0.0597
MA0259.1	MA0259.1	0.794

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10839

Novel motif	Logo	P-value
1	1	0.435
10	10	0.542
100	100	0.961
101	101	0.573
102	102	0.995
103	103	0.215
104	104	0.423
105	105	0.865
106	106	0.0175
107	107	0.0334
108	108	0.497
109	109	0.0713
11	11	0.0677
110	110	0.366
111	111	0.518
112	112	0.575
113	113	0.178
114	114	0.0765
115	115	0.824
116	116	0.207
117	117	0.413
118	118	0.818
119	119	0.16
12	12	0.886
120	120	0.07
121	121	0.558
122	122	0.392
123	123	0.0972
124	124	0.688
125	125	0.745
126	126	0.915
127	127	0.885
128	128	0.146
129	129	0.706
13	13	0.837
130	130	0.89
131	131	0.134
132	132	0.788
133	133	0.715
134	134	0.0998
135	135	0.0615
136	136	0.892
137	137	0.705
138	138	0.449
139	139	0.194
14	14	0.673
140	140	0.618
141	141	0.175
142	142	1
143	143	0.00109
144	144	0.863
145	145	0.362
146	146	0.217
147	147	0.345
148	148	0.571
149	149	0.215
15	15	0.324
150	150	0.11
151	151	0.689
152	152	0.0154
153	153	0.473
154	154	0.716
155	155	0.0953
156	156	0.852
157	157	0.403
158	158	0.124
159	159	0.457
16	16	0.119
160	160	0.1
161	161	0.742
162	162	0.323
163	163	0.564
164	164	0.231
165	165	0.425
166	166	0.822
167	167	0.704
168	168	0.327
169	169	0.0489
17	17	0.103
18	18	0.0713
19	19	0.0737
2	2	0.266
20	20	0.728
21	21	0.693
22	22	0.197
23	23	0.147
24	24	0.155
25	25	0.618
26	26	0.521
27	27	0.579
28	28	0.445
29	29	0.38
3	3	0.321
30	30	0.776
31	31	0.301
32	32	2.28569e-4
33	33	0.602
34	34	0.496
35	35	0.337
36	36	0.53
37	37	0.0308
38	38	0.796
39	39	0.376
4	4	0.389
40	40	0.134
41	41	0.3
42	42	0.616
43	43	0.324
44	44	0.539
45	45	0.332
46	46	0.148
47	47	0.241
48	48	0.308
49	49	0.413
5	5	0.482
50	50	0.473
51	51	0.937
52	52	0.51
53	53	0.354
54	54	0.612
55	55	0.531
56	56	0.333
57	57	0.416
58	58	0.816
59	59	0.0268
6	6	0.988
60	60	0.44
61	61	0.879
62	62	0.606
63	63	0.12
64	64	0.414
65	65	0.209
66	66	0.498
67	67	0.557
68	68	0.299
69	69	0.896
7	7	0.922
70	70	0.235
71	71	0.412
72	72	0.92
73	73	0.00746
74	74	0.929
75	75	0.328
76	76	0.986
77	77	0.0289
78	78	0.771
79	79	0.166
8	8	0.0458
80	80	0.357
81	81	0.443
82	82	0.265
83	83	0.581
84	84	0.648
85	85	0.157
86	86	0.454
87	87	0.0228
88	88	0.0794
89	89	0.0684
9	9	0.415
90	90	0.671
91	91	0.298
92	92	0.35
93	93	0.638
94	94	0.627
95	95	0.131
96	96	0.695
97	97	0.211
98	98	0.464
99	99	0.00826

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10839

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000176 human smooth muscle cell of umbilical artery sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0000222 (mesodermal cell)
0002594 (smooth muscle cell of the umbilical artery)
0000355 (multi-potent skeletal muscle stem cell)
0000514 (smooth muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001134 (skeletal muscle tissue)
0001637 (artery)
0002100 (trunk)
0000483 (epithelium)
0000926 (mesoderm)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000025 (tube)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0003914 (epithelial tube)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0003509 (arterial blood vessel)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0001981 (blood vessel)
0002049 (vasculature)
0000486 (multilaminar epithelium)
0007500 (epithelial tube open at both ends)
0003104 (mesenchyme)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0007798 (vascular system)
0001015 (musculature)
0002532 (epiblast (generic))
0001310 (umbilical artery)
0002329 (somite)
0002204 (musculoskeletal system)
0004535 (cardiovascular system)
0000383 (musculature of body)
0004572 (arterial system)
0004537 (blood vasculature)
0003077 (paraxial mesoderm)
0004290 (dermomyotome)
0009142 (entire embryonic mesenchyme)
0003081 (lateral plate mesoderm)
0001009 (circulatory system)
0006603 (presumptive mesoderm)
0003082 (myotome)
0004872 (splanchnic layer of lateral plate mesoderm)
0006965 (vascular cord)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.98!94.16!SOX17;;chr11:34642612..34642646,+!p1@EHF!1.58!37.45!EHF;;chr11:46299199..46299233,+!p1@CREB3L1!1.53!163.71!CREB3L1;;chr12:54380404..54380433,+!p3@HOXC10!1.18!14.27!HOXC10;;chr11:46299539..46299620,+!p2@CREB3L1!1.17!23.54!CREB3L1;;chr4:81118647..81118666,+!p1@PRDM8!1.14!17.12!PRDM8;;chr16:86600426..86600441,+!p1@FOXC2!1.12!29.96!FOXC2;;chr6:34204921..34204939,+!p3@HMGA1!1.11!352.39!HMGA1;;chr12:54378923..54378966,+!p1@HOXC10!1.07!10.70!HOXC10;;chr4:111558135..111558198,-!p2@PITX2!1.04!9.99!PITX2;;chr1:151032860..151032918,+!p1@MLLT11!1.03!115.92!MLLT11;;chr7:1577899..1577943,+!p3@MAFK!1.03!9.63!MAFK;;chr12:66218255..66218304,+!p3@HMGA2!1.02!25.68!HMGA2;;chr17:46688334..46688385,-!p1@HOXB7!1.02!13.91!HOXB7;;chr18:19749386..19749404,+!p2@GATA6!1.01!13.20!GATA6;;chr18:19749541..19749557,+!p1@GATA6!1.00!28.89!GATA6;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.00!8.92!HOXC5;;chr9:35732647..35732678,+!p2@CREB3!0.99!50.29!CREB3;;chr7:27224842..27224872,-!p1@HOXA11!0.98!8.56!HOXA11;;chr12:26277817..26277863,-!p2@BHLHE41!0.96!11.06!BHLHE41;;chr4:174450089..174450153,-!p2@HAND2!0.96!8.20!HAND2;;chr9:35732514..35732530,+!p5@CREB3!0.94!11.06!CREB3;;chr11:61520075..61520136,+!p1@C11orf9!0.93!16.41!C11orf9;;chr1:151032922..151032951,+!p2@MLLT11!0.93!12.84!MLLT11;;chr12:66218598..66218645,+!p2@HMGA2!0.92!35.31!HMGA2;;chr5:72744445..72744466,-!p2@FOXD1!0.92!12.48!FOXD1;;chr12:66218836..66218888,+!p1@HMGA2!0.91!70.26!HMGA2;;chr12:54380036..54380091,+!p4@HOXC10!0.91!7.13!HOXC10;;chr12:54393880..54393962,+!p1@HOXC9!0.91!7.13!HOXC9;;chr5:72744594..72744609,-!p1@FOXD1!0.90!33.53!FOXD1;;chr11:65686802..65686818,+!p6@DRAP1!0.89!12.13!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!0.88!26.75!FOSL1;;chr11:65687362..65687436,+!p3@DRAP1!0.86!30.32!DRAP1;;chr1:8938709..8938720,-!p3@ENO1!0.84!302.81!ENO1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.83!77.04!ZC3H12A;;chr11:65686732..65686756,+!p2@DRAP1!0.83!25.68!DRAP1;;chr19:42636586..42636607,-!p1@POU2F2!0.83!16.76!POU2F2;;chr12:54402745..54402788,+!p1@HOXC8!0.83!5.71!HOXC8;;chr12:66218904..66218913,+!p11@HMGA2!0.83!5.71!HMGA2;;chr17:46682321..46682362,-!p1@HOXB6!0.83!5.71!HOXB6;;chr17:46687959..46688007,-!p2@HOXB7!0.80!7.49!HOXB7;;chr12:66218923..66218934,+!p14@HMGA2!0.80!5.35!HMGA2;;chr6:134210243..134210257,+!p1@TCF21!0.80!5.35!TCF21;;chr17:59477275..59477286,+!p3@TBX2!0.79!7.13!TBX2;;chr9:35732592..35732640,+!p1@CREB3!0.78!72.05!CREB3;;chr12:124873357..124873401,-!p1@NCOR2!0.78!63.13!NCOR2;;chr12:54402790..54402805,+!p2@HOXC8!0.78!4.99!HOXC8;;chr7:27224795..27224840,-!p2@HOXA11!0.78!4.99!HOXA11;;chr19:45908292..45908374,-!p1@PPP1R13L!0.77!47.79!PPP1R13L;;chr10:94449703..94449718,+!p1@HHEX!0.75!19.62!HHEX;;chr7:27205106..27205134,-!p2@HOXA9!0.75!4.64!HOXA9;;chr4:111544219..111544240,-!p1@PITX2!0.75!4.64!PITX2;;chrY:21906594..21906622,-!p1@KDM5D!0.75!4.64!KDM5D;;chr16:86600870..86600921,+!p2@FOXC2!0.75!4.64!FOXC2;;chr3:25469724..25469773,+!p1@RARB!0.74!6.78!RARB;;chr17:3571863..3571881,-!p1@TAX1BP3!0.73!352.03!TAX1BP3;;chr11:65667846..65667868,-!p1@FOSL1!0.73!130.54!FOSL1;;chr15:67418119..67418162,+!p5@SMAD3!0.73!4.99!SMAD3;;chr20:50721803..50721857,-!p2@ZFP64!0.72!7.13!ZFP64;;chr11:34642656..34642667,+!p2@EHF!0.72!4.28!EHF;;chr12:54366975..54367001,+!p1@HOXC11!0.72!4.28!HOXC11;;chr20:42543441..42543497,+!p1@TOX2!0.71!20.69!TOX2;;chr12:26277956..26277980,-!p1@BHLHE41!0.71!16.41!BHLHE41;;chr17:59477233..59477263,+!p1@TBX2!0.71!14.27!TBX2;;chr12:80085120..80085156,-!p14@PAWR!0.69!3.92!PAWR;;chr2:176969228..176969260,+!p1@HOXD11!0.69!3.92!HOXD11;;chr8:145159846..145159889,+!p6@MAF1!0.68!5.71!MAF1;;chr12:26277929..26277955,-!p3@BHLHE41!0.68!5.71!BHLHE41;;chr15:67418047..67418093,+!p4@SMAD3!0.68!4.99!SMAD3;;chr6:34204973..34204990,+!p4@HMGA1!0.67!56.35!HMGA1;;chr1:170633262..170633285,+!p3@PRRX1!0.67!4.28!PRRX1;;chr7:150945865..150945896,-!p4@SMARCD3!0.66!3.57!SMARCD3;;chr7:27196267..27196311,-!p1@HOXA7!0.66!3.57!HOXA7;;chr7:35293685..35293718,-!p1@TBX20!0.66!3.57!TBX20;;chr15:67458491..67458505,+!p18@SMAD3!0.66!3.57!SMAD3;;chr11:65687158..65687216,+!p4@DRAP1!0.65!23.18!DRAP1;;chr2:200322654..200322707,-!p2@SATB2!0.65!5.35!SATB2;;chr2:192015701..192015743,-!p1@STAT4!0.65!4.99!STAT4;;chr22:38598086..38598105,+!p1@MAFF!0.64!41.73!MAFF;;chr12:80085061..80085119,-!p6@PAWR!0.64!5.71!PAWR;;chr5:134369905..134369972,-!p1@PITX1!0.63!5.35!PITX1;;chr6:34204672..34204692,+!p1@HMGA1!0.62!426.94!HMGA1;;chr2:239756671..239756732,+!p1@TWIST2!0.62!11.77!TWIST2;;chr12:27485762..27485776,+!p3@ARNTL2!0.62!9.63!ARNTL2;;chr12:54379029..54379057,+!p2@HOXC10!0.62!3.21!HOXC10;;chr11:65686952..65686975,+!p5@DRAP1!0.61!19.97!DRAP1;;chr2:239756739..239756755,+!p2@TWIST2!0.61!5.71!TWIST2;;chr6:85473156..85473210,-!p2@TBX18!0.61!3.92!TBX18;;chr1:8938736..8938756,-!p1@ENO1!0.60!3984.73!ENO1;;chr1:8938766..8938774,-!p2@ENO1!0.60!248.60!ENO1;;chr20:42543506..42543549,+!p2@TOX2!0.60!8.20!TOX2;;chr4:103423079..103423112,+!p4@NFKB1!0.59!2.85!NFKB1;;chr4:174451370..174451387,-!p1@HAND2!0.59!2.85!HAND2;;chr18:19749353..19749367,+!p4@GATA6!0.59!2.85!GATA6;;chr12:54380112..54380126,+!p5@HOXC10!0.59!2.85!HOXC10;;chr12:54394309..54394336,+!p2@HOXC9!0.59!2.85!HOXC9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.59!2.85!HOXC5;;chr12:66357214..66357233,+!p13@HMGA2!0.59!2.85!HMGA2;;chr1:151032782..151032801,+!p4@MLLT11!0.58!6.42!MLLT11;;chr12:27485889..27485900,+!p4@ARNTL2!0.58!3.57!ARNTL2;;chr11:46299186..46299195,+!p3@CREB3L1!0.58!3.21!CREB3L1;;chr2:71127699..71127744,+!p1@VAX2!0.57!6.42!VAX2;;chr1:151032739..151032748,+!p6@MLLT11!0.57!3.57!MLLT11;;chr7:44143925..44143970,+!p1@AEBP1!0.55!71.69!AEBP1;;chr21:30671690..30671762,+!p2@BACH1!0.55!10.34!BACH1;;chr19:45260775..45260838,+!p5@BCL3!0.55!3.57!BCL3;;chr11:65686776..65686787,+!p9@DRAP1!0.55!3.21!DRAP1;;chr5:72744562..72744573,-!p3@FOXD1!0.54!3.21!FOXD1;;chr6:43140095..43140145,+!p5@SRF!0.54!3.21!SRF;;chr7:27170359..27170381,-!p1@HOXA4!0.54!2.50!HOXA4;;chr7:27205136..27205164,-!p1@HOXA9!0.54!2.50!HOXA9;;chr8:55370720..55370733,+!p2@SOX17!0.54!2.50!SOX17;;chr11:46299443..46299459,+!p4@CREB3L1!0.54!2.50!CREB3L1;;chr12:54379136..54379150,+!p4@HOXC5!0.54!2.50!HOXC5;;chr3:141087562..141087594,+!p12@ZBTB38!0.54!2.50!ZBTB38;;chr3:25470156..25470227,+!p2@RARB!0.54!2.50!RARB;;chr17:46687935..46687950,-!p3@HOXB7!0.54!2.50!HOXB7;;chr15:83953397..83953425,-!p1@BNC1!0.53!2.85!BNC1;;chr3:178789522..178789564,-!p2@ZMAT3!0.52!21.76!ZMAT3;;chr12:125002827..125002855,-!p5@NCOR2!0.52!3.57!NCOR2;;chr5:72743793..72743855,-!p4@FOXD1!0.52!2.85!FOXD1;;chr11:65687243..65687276,+!p8@DRAP1!0.50!3.21!DRAP1;;chr19:9732460..9732472,-!p2@ZNF561!0.50!2.14!ZNF561;;chr20:30433396..30433414,-!p1@FOXS1!0.50!2.14!FOXS1;;chr15:67458861..67458879,+!p17@SMAD3!0.50!2.14!SMAD3;;chr16:86600458..86600461,+!p3@FOXC2!0.50!2.14!FOXC2;;chrY:2803415..2803468,+!p1@ZFY!0.50!2.14!ZFY;;chr17:3571887..3571918,-!p2@TAX1BP3!0.49!31.03!TAX1BP3;;chr19:56152332..56152347,+!p4@ZNF580!0.49!5.71!ZNF580;;chr11:65686855..65686946,+!p1@DRAP1!0.48!207.23!DRAP1;;chr17:79885537..79885554,-!p2@MAFG!0.48!4.64!MAFG;;chr15:96869255..96869291,+!p6@NR2F2!0.48!4.28!NR2F2;;chr12:66218378..66218401,+!p6@HMGA2!0.48!3.57!HMGA2;;chr12:66218443..66218461,+!p8@HMGA2!0.48!2.85!HMGA2;;chr20:50179368..50179392,-!p2@NFATC2!0.48!2.85!NFATC2;;chr17:41623259..41623278,-!p7@ETV4!0.48!2.50!ETV4;;chr1:8934931..8934947,-!p4@ENO1!0.47!8.20!ENO1;;chr2:19558373..19558392,-!p1@OSR1!0.47!6.78!OSR1;;chr2:145275162..145275202,-!p2@ZEB2!0.46!14.98!ZEB2;;chr12:125002861..125002894,-!p7@NCOR2!0.46!3.21!NCOR2;;chr19:45252008..45252024,+!p2@BCL3!0.45!7.85!BCL3;;chr8:106330656..106330684,+!p1@ZFPM2!0.45!6.06!ZFPM2;;chr18:19749517..19749531,+!p3@GATA6!0.45!3.92!GATA6;;chr1:221052700..221052730,+!p5@HLX!0.45!3.21!HLX;;chr11:65687882..65687902,+!p10@DRAP1!0.45!2.85!DRAP1;;chr12:77459306..77459365,-!p1@E2F7!0.44!30.67!E2F7;;chr12:27485823..27485868,+!p2@ARNTL2!0.44!9.63!ARNTL2;;chr12:57504975..57505019,-!p2@STAT6!0.44!9.63!STAT6;;chr17:38498594..38498661,+!p2@RARA!0.44!7.85!RARA;;chr16:29819446..29819471,+!p9@MAZ!0.44!6.78!MAZ;;chr11:65430554..65430579,-!p3@RELA!0.44!5.71!RELA;;chr11:65687222..65687240,+!p7@DRAP1!0.44!2.50!DRAP1;;chr3:39195139..39195150,-!p3@CSRNP1!0.44!2.50!CSRNP1;;chr2:5832508..5832524,+!p1@SOX11!0.44!1.78!SOX11;;chr3:71294304..71294332,-!p35@FOXP1!0.44!1.78!FOXP1;;chr11:46333934..46333963,+!p5@CREB3L1!0.44!1.78!CREB3L1;;chr12:54366949..54366973,+!p3@HOXC11!0.44!1.78!HOXC11;;chr12:54378864..54378884,+!p6@HOXC10!0.44!1.78!HOXC10;;chr12:54394059..54394088,+!p3@HOXC9!0.44!1.78!HOXC9;;chr15:67418177..67418204,+!p9@SMAD3!0.44!1.78!SMAD3;;chr15:67458836..67458859,+!p22@SMAD3!0.44!1.78!SMAD3;;chr16:86612320..86612394,+!p1@FOXL1!0.44!1.78!FOXL1;;chr1:170633058..170633084,+!p5@PRRX1!0.44!1.78!PRRX1;;chr5:139492456..139492489,+!p7@PURA!0.44!1.78!PURA;;chr7:1577952..1577963,+!p8@MAFK!0.44!1.78!MAFK;;chr8:40755333..40755352,-!p1@ZMAT4!0.44!1.78!ZMAT4;;chr3:185826764..185826803,-!p2@ETV5!0.43!8.56!ETV5;;chr5:321810..321877,+!p1@AHRR!0.43!7.13!AHRR;;chr17:41623009..41623053,-!p4@ETV4!0.43!3.21!ETV4;;chr5:174151553..174151610,+!p1@MSX2!0.42!3.21!MSX2;;chr12:124873852..124873881,-!p3@NCOR2!0.41!13.55!NCOR2;;chr6:43139041..43139094,+!p3@SRF!0.41!12.48!SRF;;chr2:231280954..231280965,+!p2@SP100!0.41!3.57!SP100;;chr20:39946400..39946423,-!p3@ZHX3!0.41!3.57!ZHX3;;chr2:101436564..101436647,+!p1@NPAS2!0.40!46.37!NPAS2;;chr3:52001448..52001478,-!p2@PCBP4!0.40!31.39!PCBP4;;chr7:26191809..26191890,+!p1@NFE2L3!0.40!10.70!NFE2L3;;chr3:52001426..52001447,-!p3@PCBP4!0.40!5.71!PCBP4;;chr19:3573282..3573289,+!p5@HMG20B!0.40!2.14!HMG20B;;chr15:76629123..76629151,+!p1@ISL2!0.40!1.78!ISL2;;chr11:65686702..65686715,+!p11@DRAP1!0.40!1.78!DRAP1;;chr4:2263809..2263854,-!p1@MXD4!0.39!85.24!MXD4;;chr12:53614115..53614154,-!p1@RARG!0.39!11.41!RARG;;chr10:94449675..94449694,+!p2@HHEX!0.39!5.35!HHEX;;chr12:96588368..96588394,+!p3@ELK3!0.39!5.35!ELK3;;chr12:66218183..66218209,+!p4@HMGA2!0.39!3.57!HMGA2;;chr3:52001396..52001425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FF:11212-116A6: Difference between revisions - resource_browser

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FF:11212-116A6: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:58, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0