FF:11225-116C1: Difference between revisions

Revision as of 15:23, 29 June 2012

Name:	CD4+ T Cells, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	53 years old adult
sex	male
age	53
cell type	t cell, CD4+
cell line	NA
company	3HBiomedical
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	CD4T727
catalog number	3H100-23-10
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.339
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.139
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.232
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.632
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.693
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0417
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.443
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.526
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.765
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.667
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.078
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.71
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.101
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0148
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0201
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.472
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.71
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0352
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0719
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.638
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.144
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.00231
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.502
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.365
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.583
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.297
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0972
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.574
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0833
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.657
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.622
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.67
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.677
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.144
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.875
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.551
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0.297
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.078
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.144
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10853

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00226
MA0003.1	MA0003.1	0.222
MA0004.1	MA0004.1	0.945
MA0006.1	MA0006.1	0.0677
MA0007.1	MA0007.1	0.454
MA0009.1	MA0009.1	0.0868
MA0014.1	MA0014.1	0.961
MA0017.1	MA0017.1	0.188
MA0018.2	MA0018.2	4.65061e-9
MA0019.1	MA0019.1	0.533
MA0024.1	MA0024.1	0.869
MA0025.1	MA0025.1	0.146
MA0027.1	MA0027.1	0.933
MA0028.1	MA0028.1	0.017
MA0029.1	MA0029.1	0.404
MA0030.1	MA0030.1	0.00766
MA0031.1	MA0031.1	3.20978e-6
MA0035.2	MA0035.2	0.209
MA0038.1	MA0038.1	0.135
MA0039.2	MA0039.2	0.584
MA0040.1	MA0040.1	0.588
MA0041.1	MA0041.1	0.279
MA0042.1	MA0042.1	0.71
MA0043.1	MA0043.1	7.59145e-4
MA0046.1	MA0046.1	0.197
MA0047.2	MA0047.2	0.139
MA0048.1	MA0048.1	0.817
MA0050.1	MA0050.1	9.26412e-6
MA0051.1	MA0051.1	0.0182
MA0052.1	MA0052.1	0.02
MA0055.1	MA0055.1	0.957
MA0057.1	MA0057.1	0.171
MA0058.1	MA0058.1	0.924
MA0059.1	MA0059.1	0.83
MA0060.1	MA0060.1	0.366
MA0061.1	MA0061.1	4.44245e-7
MA0062.2	MA0062.2	6.78481e-11
MA0065.2	MA0065.2	0.735
MA0066.1	MA0066.1	0.601
MA0067.1	MA0067.1	0.0114
MA0068.1	MA0068.1	0.791
MA0069.1	MA0069.1	0.86
MA0070.1	MA0070.1	0.584
MA0071.1	MA0071.1	0.72
MA0072.1	MA0072.1	0.239
MA0073.1	MA0073.1	0.905
MA0074.1	MA0074.1	0.33
MA0076.1	MA0076.1	0.00271
MA0077.1	MA0077.1	0.0744
MA0078.1	MA0078.1	0.931
MA0079.2	MA0079.2	0.808
MA0080.2	MA0080.2	2.57955e-9
MA0081.1	MA0081.1	0.00984
MA0083.1	MA0083.1	0.169
MA0084.1	MA0084.1	0.257
MA0087.1	MA0087.1	0.757
MA0088.1	MA0088.1	0.76
MA0090.1	MA0090.1	4.3739e-4
MA0091.1	MA0091.1	0.164
MA0092.1	MA0092.1	0.701
MA0093.1	MA0093.1	0.979
MA0099.2	MA0099.2	0.192
MA0100.1	MA0100.1	0.631
MA0101.1	MA0101.1	2.77728e-5
MA0102.2	MA0102.2	0.968
MA0103.1	MA0103.1	0.724
MA0104.2	MA0104.2	0.278
MA0105.1	MA0105.1	1.53562e-4
MA0106.1	MA0106.1	0.0337
MA0107.1	MA0107.1	6.3255e-5
MA0108.2	MA0108.2	2.56528e-4
MA0111.1	MA0111.1	0.439
MA0112.2	MA0112.2	0.0595
MA0113.1	MA0113.1	0.347
MA0114.1	MA0114.1	0.221
MA0115.1	MA0115.1	0.294
MA0116.1	MA0116.1	0.233
MA0117.1	MA0117.1	0.0371
MA0119.1	MA0119.1	0.678
MA0122.1	MA0122.1	0.879
MA0124.1	MA0124.1	0.697
MA0125.1	MA0125.1	0.0746
MA0131.1	MA0131.1	0.064
MA0135.1	MA0135.1	0.136
MA0136.1	MA0136.1	4.08429e-16
MA0137.2	MA0137.2	0.347
MA0138.2	MA0138.2	0.0206
MA0139.1	MA0139.1	0.762
MA0140.1	MA0140.1	0.225
MA0141.1	MA0141.1	0.0406
MA0142.1	MA0142.1	0.122
MA0143.1	MA0143.1	0.217
MA0144.1	MA0144.1	0.44
MA0145.1	MA0145.1	0.0164
MA0146.1	MA0146.1	0.966
MA0147.1	MA0147.1	0.336
MA0148.1	MA0148.1	0.441
MA0149.1	MA0149.1	0.817
MA0150.1	MA0150.1	0.89
MA0152.1	MA0152.1	0.0105
MA0153.1	MA0153.1	0.211
MA0154.1	MA0154.1	0.747
MA0155.1	MA0155.1	0.166
MA0156.1	MA0156.1	7.03042e-12
MA0157.1	MA0157.1	6.82713e-5
MA0159.1	MA0159.1	0.824
MA0160.1	MA0160.1	0.406
MA0162.1	MA0162.1	0.0745
MA0163.1	MA0163.1	0.0533
MA0164.1	MA0164.1	0.881
MA0258.1	MA0258.1	0.514
MA0259.1	MA0259.1	0.289

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10853

Novel motif	Logo	P-value
1	1	0.847
10	10	0.0173
100	100	0.857
101	101	0.148
102	102	0.874
103	103	0.459
104	104	0.956
105	105	0.532
106	106	0.718
107	107	0.00919
108	108	0.458
109	109	0.929
11	11	0.699
110	110	0.429
111	111	0.754
112	112	0.708
113	113	0.282
114	114	0.963
115	115	0.227
116	116	0.154
117	117	0.00911
118	118	0.616
119	119	0.181
12	12	0.715
120	120	0.359
121	121	0.485
122	122	0.946
123	123	1.38178e-5
124	124	0.818
125	125	0.501
126	126	0.862
127	127	0.415
128	128	0.536
129	129	0.416
13	13	0.723
130	130	0.292
131	131	0.567
132	132	0.281
133	133	0.712
134	134	0.946
135	135	0.245
136	136	0.925
137	137	0.0264
138	138	0.658
139	139	0.168
14	14	0.674
140	140	0.386
141	141	0.727
142	142	0.321
143	143	0.0874
144	144	0.815
145	145	0.729
146	146	0.537
147	147	0.0193
148	148	0.455
149	149	0.194
15	15	0.456
150	150	0.715
151	151	0.641
152	152	0.229
153	153	0.444
154	154	0.127
155	155	0.0544
156	156	0.904
157	157	0.588
158	158	0.00457
159	159	0.96
16	16	0.219
160	160	0.0936
161	161	0.652
162	162	0.0226
163	163	0.794
164	164	0.171
165	165	0.965
166	166	0.293
167	167	0.136
168	168	0.562
169	169	0.1
17	17	0.582
18	18	0.494
19	19	0.0235
2	2	0.129
20	20	0.178
21	21	0.723
22	22	0.188
23	23	0.43
24	24	0.55
25	25	0.218
26	26	0.848
27	27	0.654
28	28	0.401
29	29	0.161
3	3	0.445
30	30	0.039
31	31	0.462
32	32	0.00196
33	33	0.555
34	34	0.24
35	35	0.242
36	36	0.119
37	37	0.789
38	38	0.652
39	39	0.27
4	4	0.933
40	40	0.417
41	41	0.201
42	42	0.184
43	43	0.813
44	44	0.548
45	45	0.136
46	46	0.918
47	47	0.538
48	48	0.938
49	49	0.176
5	5	0.715
50	50	0.483
51	51	0.827
52	52	0.586
53	53	0.234
54	54	0.833
55	55	0.909
56	56	0.761
57	57	0.785
58	58	0.248
59	59	0.153
6	6	0.973
60	60	0.814
61	61	0.218
62	62	0.379
63	63	0.802
64	64	0.993
65	65	0.396
66	66	0.782
67	67	0.47
68	68	0.574
69	69	0.496
7	7	0.721
70	70	0.169
71	71	0.356
72	72	0.586
73	73	0.452
74	74	0.969
75	75	0.0929
76	76	0.073
77	77	0.00437
78	78	0.765
79	79	0.959
8	8	0.311
80	80	0.0727
81	81	0.979
82	82	0.604
83	83	0.771
84	84	0.19
85	85	0.539
86	86	0.208
87	87	0.291
88	88	0.964
89	89	0.00312
9	9	0.564
90	90	0.121
91	91	0.785
92	92	0.996
93	93	0.871
94	94	0.466
95	95	0.629
96	96	0.884
97	97	0.348
98	98	0.471
99	99	2.77473e-5

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10853

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000031 CD4-positive T cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000034 (stem cell)
0002032 (hematopoietic oligopotent progenitor cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002420 (immature T cell)
0002419 (mature T cell)
0000624 (CD4-positive, alpha-beta T cell)
0000790 (immature alpha-beta T cell)
0000838 (lymphoid lineage restricted progenitor cell)
0002031 (hematopoietic lineage restricted progenitor cell)
0000827 (pro-T cell)
0000037 (hematopoietic stem cell)
0000566 (angioblastic mesenchymal cell)
0000837 (hematopoietic multipotent progenitor cell)
0000051 (common lymphoid progenitor)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.19!152.25!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!2.10!124.91!ATXN7;;chr5:133450365..133450444,+!p1@TCF7!1.96!392.63!TCF7;;chr1:25256756..25256774,-!p1@RUNX3!1.93!154.22!RUNX3;;chr4:109087445..109087463,-!p1@LEF1!1.93!83.80!LEF1;;chr2:192015701..192015743,-!p1@STAT4!1.92!110.75!STAT4;;chr7:50343634..50343717,+!p2@IKZF1!1.92!82.22!IKZF1;;chr3:71542615..71542644,-!p12@FOXP1!1.89!77.11!FOXP1;;chr10:8096772..8096787,+!p2@GATA3!1.88!87.93!GATA3;;chr2:157189180..157189290,-!p1@NR4A2!1.86!356.24!NR4A2;;chr19:54058073..54058088,+!p1@ZNF331!1.83!67.27!ZNF331;;chr19:45971246..45971265,+!p1@FOSB!1.80!1075.41!FOSB;;chr10:8096631..8096660,+!p1@GATA3!1.78!70.42!GATA3;;chr6:91006518..91006570,-!p1@BACH2!1.72!114.49!BACH2;;chr15:60884706..60884743,-!p1@RORA!1.69!237.63!RORA;;chr20:50159198..50159299,-!p1@NFATC2!1.69!69.64!NFATC2;;chr5:133451347..133451358,+!p3@TCF7!1.68!47.41!TCF7;;chr2:231090433..231090469,+!p1@SP140!1.68!47.01!SP140;;chr9:3525727..3525828,-!p2@RFX3!1.67!112.52!RFX3;;chr19:54041669..54041697,+!p2@ZNF331!1.67!45.24!ZNF331;;chrY:21906594..21906622,-!p1@KDM5D!1.65!44.06!KDM5D;;chr3:18486354..18486377,-!p2@SATB1!1.62!50.16!SATB1;;chr3:71542684..71542720,-!p18@FOXP1!1.62!40.92!FOXP1;;chr4:109090075..109090095,-!p2@LEF1!1.62!40.52!LEF1;;chrX:106960285..106960299,-!p1@TSC22D3!1.61!1013.45!TSC22D3;;chr14:75745523..75745537,+!p1@FOS!1.60!4410.82!FOS;;chr2:192015750..192015793,-!p2@STAT4!1.59!49.96!STAT4;;chr6:106546808..106546833,+!p3@PRDM1!1.57!45.64!PRDM1;;chr3:39195075..39195088,-!p1@CSRNP1!1.55!205.76!CSRNP1;;chr3:71355163..71355209,-!p5@FOXP1!1.54!45.83!FOXP1;;chr6:12009042..12009092,+!p6@HIVEP1!1.51!40.92!HIVEP1;;chr19:16435625..16435682,+!p1@KLF2!1.49!912.73!KLF2;;chr9:117150254..117150271,-!p1@AKNA!1.49!80.06!AKNA;;chr9:102584262..102584276,+!p1@NR4A3!1.49!65.90!NR4A3;;chr7:50343895..50343936,+!p5@IKZF1!1.49!30.10!IKZF1;;chr3:71542651..71542683,-!p22@FOXP1!1.49!29.90!FOXP1;;chr17:38020392..38020477,-!p1@IKZF3!1.48!29.51!IKZF3;;chr2:157189617..157189667,-!p4@NR4A2!1.47!28.52!NR4A2;;chr1:59249688..59249703,-!p3@JUN!1.46!161.30!JUN;;chr19:19729477..19729542,-!p1@PBX4!1.46!58.82!PBX4;;chr10:35484053..35484076,+!p1@CREM!1.45!66.09!CREM;;chr20:51588873..51588953,+!p1@TSHZ2!1.45!35.60!TSHZ2;;chr19:12902289..12902307,+!p1@JUNB!1.43!5631.41!JUNB;;chr1:25291475..25291511,-!p2@RUNX3!1.43!26.16!RUNX3;;chr6:106546834..106546850,+!p4@PRDM1!1.42!25.57!PRDM1;;chr6:391743..391759,+!p1@IRF4!1.42!25.57!IRF4;;chr7:50344251..50344288,+!p3@IKZF1!1.42!25.57!IKZF1;;chr1:59249707..59249727,-!p1@JUN!1.38!932.60!JUN;;chr11:67007548..67007610,+!p3@KDM2A!1.37!160.91!KDM2A;;chr8:123793988..123794016,+!p1@ZHX2!1.37!38.95!ZHX2;;chr6:91006575..91006602,-!p2@BACH2!1.37!33.24!BACH2;;chr5:131826457..131826514,-!p1@IRF1!1.36!822.25!IRF1;;chr21:36421535..36421610,-!p2@RUNX1!1.35!73.96!RUNX1;;chr2:231090471..231090504,+!p2@SP140!1.35!21.44!SP140;;chr13:74707894..74707947,-!p6@KLF12!1.34!23.21!KLF12;;chr3:18487057..18487105,-!p4@SATB1!1.34!20.65!SATB1;;chr4:103422499..103422632,+!p1@NFKB1!1.33!415.25!NFKB1;;chr9:102584241..102584261,+!p4@NR4A3!1.33!31.08!NR4A3;;chr14:99738138..99738163,-!p1@BCL11B!1.33!20.46!BCL11B;;chrX:106960221..106960236,-!p3@TSC22D3!1.32!54.10!TSC22D3;;chr7:104654690..104654704,+!p2@MLL5!1.32!38.95!MLL5;;chr20:51589835..51589848,+!p5@TSHZ2!1.32!20.06!TSHZ2;;chr12:72056800..72056834,+!p1@THAP2!1.31!25.77!THAP2;;chr17:37934365..37934387,-!p2@IKZF3!1.31!19.47!IKZF3;;chrX:106960180..106960197,-!p2@TSC22D3!1.30!70.82!TSC22D3;;chr10:3824332..3824425,-!p4@KLF6!1.28!28.92!KLF6;;chr8:81397820..81397836,+!p2@ZBTB10!1.27!22.03!ZBTB10;;chr19:16435423..16435484,+!p5@KLF2!1.27!17.70!KLF2;;chr7:104654718..104654741,+!p3@MLL5!1.26!24.98!MLL5;;chr8:81397846..81397860,+!p3@ZBTB10!1.26!21.64!ZBTB10;;chr2:43453734..43453751,-!p1@ZFP36L2!1.25!1729.47!ZFP36L2;;chr10:3827389..3827408,-!p1@KLF6!1.25!1260.52!KLF6;;chr11:128392273..128392308,-!p2@ETS1!1.25!70.62!ETS1;;chr19:12721790..12721810,+!p2@ZNF791!1.25!45.83!ZNF791;;chr14:64971288..64971316,-!p2@ZBTB25!1.24!50.36!ZBTB25;;chr3:23986824..23986848,+!p2@NR1D2!1.23!88.72!NR1D2;;chr14:64970670..64970712,-!p3@ZBTB25!1.21!32.85!ZBTB25;;chr4:38665769..38665801,+!p2@KLF3!1.20!133.17!KLF3;;chr10:35416142..35416169,+!p3@CREM!1.20!39.34!CREM;;chr10:35484090..35484104,+!p6@CREM!1.20!14.75!CREM;;chr19:54041645..54041661,+!p5@ZNF331!1.20!14.75!ZNF331;;chr13:41593425..41593480,-!p1@ELF1!1.19!90.09!ELF1;;chr4:109089573..109089585,-!p8@LEF1!1.19!14.36!LEF1;;chr14:99737850..99737852,-!p3@BCL11B!1.19!14.36!BCL11B;;chr7:50344289..50344323,+!p1@IKZF1!1.18!14.16!IKZF1;;chrX:49121165..49121179,-!p1@FOXP3!1.18!13.97!FOXP3;;chr3:71179699..71179744,-!p2@FOXP1!1.17!102.09!FOXP1;;chr14:65569101..65569119,-!p3@MAX!1.17!43.67!MAX;;chr4:87927888..87927912,+!p18@AFF1!1.17!13.77!AFF1;;chr15:60884747..60884774,-!p3@RORA!1.16!33.24!RORA;;chr5:142782823..142782854,-!p3@NR3C1!1.16!19.08!NR3C1;;chr18:46475696..46475713,-!p1@SMAD7!1.16!14.95!SMAD7;;chr14:35873947..35873965,-!p1@NFKBIA!1.15!814.58!NFKBIA;;chr2:61108650..61108687,+!p2@REL!1.15!64.32!REL;;chr6:143266297..143266356,-!p1@HIVEP2!1.14!60.98!HIVEP2;;chr1:45805693..45805718,+!p3@TOE1!1.14!27.74!TOE1;;chr2:192015677..192015691,-!p3@STAT4!1.14!12.79!STAT4;;chr3:39195139..39195150,-!p3@CSRNP1!1.13!15.93!CSRNP1;;chr6:91006503..91006517,-!p3@BACH2!1.13!12.59!BACH2;;chr2:97202480..97202499,+!p1@ARID5A!1.12!123.34!ARID5A;;chr10:104154246..104154347,+!p3@NFKB2!1.12!74.95!NFKB2;;chr1:91487836..91487854,-!p3@ZNF644!1.12!27.93!ZNF644;;chr2:97202991..97203043,+!p3@ARID5A!1.12!12.20!ARID5A;;chr9:102584128..102584144,+!p3@NR4A3!1.11!23.02!NR4A3;;chrX:106960249..106960260,-!p5@TSC22D3!1.11!19.08!TSC22D3;;chr7:106809470..106809481,+!p2@HBP1!1.11!16.92!HBP1;;chr11:128392085..128392232,-!p1@ETS1!1.10!392.24!ETS1;;chr19:16435523..16435619,+!p2@KLF2!1.09!15.93!KLF2;;chr17:38497662..38497713,+!p4@RARA!1.09!13.18!RARA;;chr19:18392422..18392440,-!p1@JUND!1.08!1504.44!JUND;;chr5:172483347..172483407,+!p1@C5orf41!1.08!84.19!CREBRF;;chr3:18466787..18466839,-!p1@SATB1!1.08!49.96!SATB1;;chr9:32550839..32550962,-!p3@TOPORS!1.08!27.93!TOPORS;;chr12:72056773..72056796,+!p3@THAP2!1.08!14.56!THAP2;;chr3:18480217..18480239,-!p3@SATB1!1.08!11.02!SATB1;;chr7:50344144..50344157,+!p6@IKZF1!1.07!10.82!IKZF1;;chr3:71542747..71542766,-!p34@FOXP1!1.07!10.62!FOXP1;;chr14:90085458..90085557,-!p1@FOXN3!1.06!110.55!FOXN3;;chr10:3827371..3827386,-!p2@KLF6!1.06!89.11!KLF6;;chr6:12008986..12009016,+!p3@HIVEP1!1.06!32.85!HIVEP1;;chr9:114287433..114287513,+!p1@ZNF483!1.06!27.34!ZNF483;;chr3:63898321..63898396,+!p3@ATXN7!1.06!24.39!ATXN7;;chr19:45972701..45972774,+!p2@FOSB!1.06!14.56!FOSB;;chr8:102218439..102218455,-!p3@ZNF706!1.06!10.43!ZNF706;;chr3:101568349..101568365,+!p1@NFKBIZ!1.05!531.51!NFKBIZ;;chr15:31619326..31619390,+!p2@KLF13!1.05!120.19!KLF13;;chr2:61108695..61108753,+!p1@REL!1.05!71.80!REL;;chr7:17338324..17338341,+!p3@AHR!1.05!34.82!AHR;;chr3:114819124..114819200,-!p3@ZBTB20!1.05!24.00!ZBTB20;;chr1:59249732..59249749,-!p2@JUN!1.04!120.58!JUN;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.04!56.65!ZNF10;;chr19:54041603..54041615,+!p10@ZNF331!1.04!10.03!ZNF331;;chr17:38020516..38020544,-!p5@IKZF3!1.04!10.03!IKZF3;;chrY:2803415..2803468,+!p1@ZFY!1.04!10.03!ZFY;;chr4:109089901..109089930,-!p3@LEF1!1.04!10.03!LEF1;;chr11:67007477..67007493,+!p2@KDM2A!1.03!84.39!KDM2A;;chr10:3827417..3827428,-!p3@KLF6!1.03!84.00!KLF6;;chr3:114866084..114866118,-!p2@ZBTB20!1.03!35.80!ZBTB20;;chr13:74708246..74708264,-!p8@KLF12!1.03!10.82!KLF12;;chr20:56195474..56195506,-!p1@ZBP1!1.03!9.84!ZBP1;;chr7:99097863..99097936,-!p1@ZNF394!1.02!96.19!ZNF394;;chr13:41240717..41240735,-!p2@FOXO1!1.02!65.11!FOXO1;;chrX:101186981..101187030,-!p1@ZMAT1!1.02!31.47!ZMAT1;;chr19:19779619..19779670,+!p1@ZNF101!1.02!27.34!ZNF101;;chr1:59249645..59249656,-!p4@JUN!1.02!24.00!JUN;;chr11:85375237..85375277,-!p4@CREBZF!1.02!11.02!CREBZF;;chr7:64126503..64126528,+!p1@ZNF107!1.01!66.29!ZNF107;;chr9:73028332..73028385,-!p3@KLF9!1.01!32.26!KLF9;;chr9:20620829..20620848,-!p7@MLLT3!1.01!9.25!MLLT3;;chr4:109088130..109088163,-!p13@LEF1!1.01!9.25!LEF1;;chr19:54041574..54041589,+!p6@ZNF331!1.01!9.25!ZNF331;;chr1:235491462..235491510,-!p1@ARID4B!1.00!165.04!ARID4B;;chr3:39195037..39195069,-!p2@CSRNP1!1.00!56.46!CSRNP1;;chr19:38085768..38085821,+!p1@ZNF540!1.00!13.77!ZNF540;;chr7:127032330..127032356,-!p3@ZNF800!1.00!11.61!ZNF800;;chr14:75988831..75988847,+!p2@BATF!1.00!9.05!BATF;;chr4:149365827..149365870,-!p5@NR3C2!1.00!9.05!NR3C2;;chr18:77155922..77155939,+!p1@NFATC1!0.99!24.79!NFATC1;;chr7:21467642..21467671,+!p2@SP4!0.99!20.46!SP4;;chr8:81398511..81398523,+!p8@ZBTB10!0.99!10.82!ZBTB10;;chr8:123794038..123794056,+!p5@ZHX2!0.99!8.85!ZHX2;;chr2:174828545..174828644,-!p1@SP3!0.98!132.78!SP3;;chr7:21467674..21467727,+!p1@SP4!0.98!34.82!SP4;;chr1:91487774..91487802,-!p2@ZNF644!0.98!23.02!ZNF644;;chr17:56565257..56565283,-!p2@HSF5!0.98!8.46!HSF5;;chr4:109088940..109089037,-!p4@LEF1!0.98!8.46!LEF1;;chr3:71114066..71114114,-!p1@FOXP1!0.97!174.48!FOXP1;;chr2:208394817..208394834,+!p3@CREB1!0.97!34.62!CREB1;;chr8:81397876..81397898,+!p5@ZBTB10!0.97!10.03!ZBTB10;;chr5:142814241..142814278,-!p12@NR3C1!0.97!8.26!NR3C1;;chr8:123793252..123793266,+!p10@ZHX2!0.97!8.26!ZHX2;;chr20:51589732..51589769,+!p3@TSHZ2!0.97!8.26!TSHZ2;;chrY:21906761..21906810,-!p2@KDM5D!0.97!8.26!KDM5D;;chr17:38020481..38020506,-!p7@IKZF3!0.97!8.26!IKZF3;;chr19:19843900..19843928,-!p1@ZNF14!0.96!41.70!ZNF14;;chr6:157098579..157098634,+!p4@ARID1B!0.96!18.69!ARID1B;;chr13:74708269..74708291,-!p7@KLF12!0.96!11.21!KLF12;;chr14:69262947..69262986,-!p3@ZFP36L1!0.96!9.84!ZFP36L1;;chr7:127032296..127032317,-!p4@ZNF800!0.96!9.64!ZNF800;;chr4:109088089..109088101,-!p11@LEF1!0.96!8.07!LEF1;;chr4:140005443..140005527,-!p2@ELF2!0.95!48.19!ELF2;;chr7:64838786..64838809,+!p2@ZNF92!0.95!46.82!ZNF92;;chr13:74708372..74708409,-!p4@KLF12!0.95!18.88!KLF12;;chr16:3313791..3313834,+!p2@ZNF263!0.95!18.10!ZNF263;;chr11:128563948..128564003,+!p1@FLI1!0.94!97.37!F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hr1:43148855..43148908,+!p4@YBX1!0.39!2.75!YBX1;;chr4:124361..124372,+!p3@ZNF718!0.39!2.56!ZNF718;;chr18:77867177..77867197,+!p3@ADNP2!0.39!2.56!ADNP2;;chr7:92076714..92076729,+!p2@GATAD1!0.39!1.97!GATAD1;;chr17:53342311..53342400,+!p1@HLF!0.39!1.77!HLF;;chr3:14989138..14989151,+!p6@NR2C2!0.39!1.77!NR2C2;;chr3:5020582..5020599,+!p10@BHLHE40!0.39!1.77!BHLHE40;;chr14:64971323..64971333,-!p10@ZBTB25!0.39!1.77!ZBTB25;;chr2:187350973..187351072,+!p1@ZC3H15!0.38!191.20!ZC3H15;;chr1:158979686..158979745,+!p1@IFI16!0.38!71.21!IFI16;;chr7:4721885..4721945,+!p1@FOXK1!0.38!65.31!FOXK1;;chr14:103058948..103059005,+!p1@RCOR1!0.38!59.60!RCOR1;;chr2:113012592..113012671,-!p1@ZC3H8!0.38!36.98!ZC3H8;;chr7:64254793..64254813,+!p1@ZNF138!0.38!24.39!ZNF138;;chr10:21823128..21823216,+!p1@MLLT10!0.38!19.28!MLLT10;;chr10:21823243..21823290,+!p2@MLLT10!0.38!9.05!MLLT10;;chr8:57123815..57123867,-!p1@PLAG1!0.38!8.26!PLAG1;;chr1:205600919..205600982,-!p3@ELK4!0.38!7.47!ELK4;;chr21:30671189..30671207,+!p4@BACH1!0.38!6.88!BACH1;;chr6:126102292..126102329,+!p3@NCOA7!0.38!6.49!NCOA7;;chr19:37862054..37862110,+!p1@ZNF527!0.38!5.31!ZNF527;;chr19:37958318..37958365,-!p2@ZNF569!0.38!5.11!ZNF569;;chr19:52772821..52772828,+!p2@ZNF766!0.38!2.56!ZNF766;;chr17:36873780..36873800,+!p5@MLLT6!0.38!2.16!MLLT6;;chr6:35227247..35227280,+!p3@ZNF76!0.38!2.16!ZNF76;;chr8:116681108..116681120,-!p9@TRPS1!0.38!1.97!TRPS1;;chr6:44355478..44355489,+!p5@CDC5L!0.38!1.57!CDC5L;;chr6:28048343..28048354,+!p1@ZNF165!0.38!1.38!ZNF165;;chr8:123794030..123794037,+!p14@ZHX2!0.38!1.38!ZHX2;;chr17:37934268..37934277,-!p10@IKZF3!0.38!1.38!IKZF3;;chr10:31610584..31610601,+!p19@ZEB1!0.38!1.38!ZEB1;;chr10:64134045..64134083,+!p3@ZNF365!0.38!1.38!ZNF365;;chr13:41593405..41593416,-!p9@ELF1!0.38!1.38!ELF1;;chr14:35874125..35874149,-!p11@NFKBIA!0.38!1.38!NFKBIA;;chr14:69262916..69262929,-!p11@ZFP36L1!0.38!1.38!ZFP36L1;;chr14:74256787..74256858,-!p6@C14orf43!0.38!1.38!C14orf43;;chr19:56146421..56146438,+!p13@ZNF580,p4@ZNF581!0.38!1.38!ZNF580;;chr1:59250262..59250296,-!p5@JUN!0.38!1.38!JUN;;chr20:23342623..23342652,+!p2@GZF1!0.38!1.38!GZF1;;chr21:36421209..36421230,-!p24@RUNX1!0.38!1.38!RUNX1;;chr21:36421401..36421414,-!p16@RUNX1!0.38!1.38!RUNX1;;chr2:214017168..214017189,-!p8@IKZF2!0.38!1.38!IKZF2;;chr4:109089095..109089144,-!p6@LEF1!0.38!1.38!LEF1;;chr4:149363662..149363688,-!p6@NR3C2!0.38!1.38!NR3C2;;chrX:70316072..70316085,+!p4@FOXO4!0.38!1.38!FOXO4;;chr17:40540377..40540481,-!p1@STAT3!0.37!107.01!STAT3;;chr5:150080543..150080664,-!p1@RBM22!0.37!90.68!RBM22;;chr19:8579030..8579061,-!p1@ZNF414!0.37!33.64!ZNF414;;chr19:53935221..53935258,+!p1@ZNF761!0.37!20.85!ZNF761;;chr19:58258167..58258201,+!p1@ZNF776!0.37!12.20!ZNF776;;chr1:154975110..154975149,+!p2@ZBTB7B!0.37!3.74!ZBTB7B;;chr16:4322948..4322975,-!p3@TFAP4!0.37!3.54!TFAP4;;chr1:205601064..205601087,-!p4@ELK4!0.37!3.34!ELK4;;chr2:208030705..208030718,-!p7@KLF7!0.37!2.36!KLF7;;chr16:68119294..68119305,+!p6@NFATC3!0.37!2.16!NFATC3;;chr4:2264015..2264041,-!p4@MXD4!0.37!1.77!MXD4;;chr6:135502501..135502546,+!p1@MYB!0.37!1.77!MYB;;chrX:101187036..101187056,-!p2@ZMAT1!0.37!1.57!ZMAT1;;chr12:69753448..69753577,+!p1@YEATS4!0.36!40.72!YEATS4;;chr1:78149041..78149142,-!p1@ZZZ3!0.36!39.15!ZZZ3;;chr14:45722360..45722415,-!p1@MIS18BP1!0.36!32.26!MIS18BP1;;chr3:88108381..88108450,+!p1@ENST00000473136!0.36!21.83!ZNF654;;chr6:116989916..116989979,-!p1@ZUFSP!0.36!19.28!ZUFSP;;chr2:208030647..208030689,-!p1@KLF7!0.36!16.92!KLF7;;chr19:20011744..20011770,+!p1@ZNF93!0.36!7.47!ZNF93;;chr7:99156212..99156244,+!p3@ZNF655!0.36!7.28!ZNF655;;chr19:37709076..37709154,+!p1@ZNF383!0.36!6.29!ZNF383;;chr4:10458982..10459007,-!p2@ZNF518B!0.36!6.10!ZNF518B;;chr6:44233297..44233330,-!p2@NFKBIE!0.36!4.72!NFKBIE;;chr12:108154925..108154945,-!p2@PRDM4!0.36!4.33!PRDM4;;chr19:36980455..36980469,-!p2@ZNF566!0.36!3.74!ZNF566;;chr4:95128841..95128865,+!p4@SMARCAD1!0.36!3.54!SMARCAD1;;chr19:57752200..57752254,+!p3@ZNF805!0.36!3.34!ZNF805;;

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FF:11225-116C1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 15:23, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0