FF:11433-118H2: Difference between revisions

Revision as of 17:42, 29 June 2012

Name:	Smooth Muscle Cells - Brachiocephalic, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	brachiocephalic artery
dev stage	NA
sex	unknown
age	NA
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1851
catalog number	custom
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.192
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.139
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.109
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.188
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.751
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0581
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.149
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.323
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.359
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0525
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.00703
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00757
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.175
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.00173
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.109
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.155
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.176
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.456
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.603
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.234
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.109
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0.0581
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12043

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.175
MA0003.1	MA0003.1	0.529
MA0004.1	MA0004.1	0.00158
MA0006.1	MA0006.1	0.209
MA0007.1	MA0007.1	0.838
MA0009.1	MA0009.1	0.157
MA0014.1	MA0014.1	0.787
MA0017.1	MA0017.1	0.505
MA0018.2	MA0018.2	0.00746
MA0019.1	MA0019.1	0.412
MA0024.1	MA0024.1	2.27224e-4
MA0025.1	MA0025.1	0.953
MA0027.1	MA0027.1	0.901
MA0028.1	MA0028.1	4.26692e-5
MA0029.1	MA0029.1	0.224
MA0030.1	MA0030.1	0.891
MA0031.1	MA0031.1	0.0595
MA0035.2	MA0035.2	0.563
MA0038.1	MA0038.1	0.385
MA0039.2	MA0039.2	0.615
MA0040.1	MA0040.1	0.557
MA0041.1	MA0041.1	0.164
MA0042.1	MA0042.1	0.657
MA0043.1	MA0043.1	0.746
MA0046.1	MA0046.1	0.407
MA0047.2	MA0047.2	0.576
MA0048.1	MA0048.1	0.302
MA0050.1	MA0050.1	1.80983e-4
MA0051.1	MA0051.1	0.581
MA0052.1	MA0052.1	0.633
MA0055.1	MA0055.1	0.341
MA0057.1	MA0057.1	0.21
MA0058.1	MA0058.1	4.78128e-4
MA0059.1	MA0059.1	0.701
MA0060.1	MA0060.1	5.87434e-4
MA0061.1	MA0061.1	0.28
MA0062.2	MA0062.2	0.0132
MA0065.2	MA0065.2	0.0974
MA0066.1	MA0066.1	0.978
MA0067.1	MA0067.1	0.0194
MA0068.1	MA0068.1	0.595
MA0069.1	MA0069.1	0.919
MA0070.1	MA0070.1	0.0909
MA0071.1	MA0071.1	0.937
MA0072.1	MA0072.1	0.937
MA0073.1	MA0073.1	0.325
MA0074.1	MA0074.1	0.686
MA0076.1	MA0076.1	7.75504e-5
MA0077.1	MA0077.1	0.238
MA0078.1	MA0078.1	0.223
MA0079.2	MA0079.2	0.113
MA0080.2	MA0080.2	2.8319e-5
MA0081.1	MA0081.1	0.406
MA0083.1	MA0083.1	4.80087e-4
MA0084.1	MA0084.1	0.0485
MA0087.1	MA0087.1	0.298
MA0088.1	MA0088.1	0.499
MA0090.1	MA0090.1	5.03149e-5
MA0091.1	MA0091.1	0.574
MA0092.1	MA0092.1	0.0373
MA0093.1	MA0093.1	0.00917
MA0099.2	MA0099.2	3.14263e-10
MA0100.1	MA0100.1	0.132
MA0101.1	MA0101.1	0.698
MA0102.2	MA0102.2	0.291
MA0103.1	MA0103.1	1.63101e-4
MA0104.2	MA0104.2	0.0187
MA0105.1	MA0105.1	0.036
MA0106.1	MA0106.1	0.0394
MA0107.1	MA0107.1	0.544
MA0108.2	MA0108.2	0.00426
MA0111.1	MA0111.1	0.00687
MA0112.2	MA0112.2	0.433
MA0113.1	MA0113.1	0.918
MA0114.1	MA0114.1	0.304
MA0115.1	MA0115.1	0.49
MA0116.1	MA0116.1	0.0413
MA0117.1	MA0117.1	0.921
MA0119.1	MA0119.1	0.426
MA0122.1	MA0122.1	0.583
MA0124.1	MA0124.1	0.349
MA0125.1	MA0125.1	0.767
MA0131.1	MA0131.1	0.641
MA0135.1	MA0135.1	0.661
MA0136.1	MA0136.1	0.033
MA0137.2	MA0137.2	0.164
MA0138.2	MA0138.2	0.45
MA0139.1	MA0139.1	0.793
MA0140.1	MA0140.1	0.531
MA0141.1	MA0141.1	0.696
MA0142.1	MA0142.1	0.622
MA0143.1	MA0143.1	0.692
MA0144.1	MA0144.1	0.11
MA0145.1	MA0145.1	0.449
MA0146.1	MA0146.1	0.332
MA0147.1	MA0147.1	0.236
MA0148.1	MA0148.1	0.281
MA0149.1	MA0149.1	0.755
MA0150.1	MA0150.1	0.364
MA0152.1	MA0152.1	0.153
MA0153.1	MA0153.1	0.489
MA0154.1	MA0154.1	0.215
MA0155.1	MA0155.1	0.927
MA0156.1	MA0156.1	0.463
MA0157.1	MA0157.1	0.465
MA0159.1	MA0159.1	0.606
MA0160.1	MA0160.1	0.475
MA0162.1	MA0162.1	0.0511
MA0163.1	MA0163.1	0.927
MA0164.1	MA0164.1	0.96
MA0258.1	MA0258.1	0.102
MA0259.1	MA0259.1	0.246

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12043

Novel motif	Logo	P-value
1	1	0.49
10	10	0.225
100	100	0.023
101	101	0.091
102	102	0.649
103	103	0.392
104	104	0.581
105	105	0.258
106	106	0.37
107	107	0.684
108	108	0.599
109	109	0.852
11	11	0.826
110	110	0.723
111	111	0.115
112	112	0.762
113	113	0.143
114	114	0.711
115	115	0.683
116	116	0.131
117	117	0.603
118	118	0.801
119	119	0.91
12	12	0.877
120	120	0.288
121	121	0.994
122	122	0.655
123	123	0.0199
124	124	0.0708
125	125	0.808
126	126	0.365
127	127	0.463
128	128	0.386
129	129	0.579
13	13	0.171
130	130	0.86
131	131	0.021
132	132	0.617
133	133	0.288
134	134	0.18
135	135	0.414
136	136	0.169
137	137	0.453
138	138	0.897
139	139	0.0252
14	14	0.0848
140	140	0.667
141	141	0.629
142	142	0.816
143	143	0.324
144	144	0.509
145	145	0.582
146	146	0.405
147	147	0.201
148	148	0.252
149	149	0.475
15	15	0.511
150	150	0.535
151	151	0.885
152	152	0.0157
153	153	0.708
154	154	0.928
155	155	0.00184
156	156	0.569
157	157	0.509
158	158	0.0165
159	159	0.233
16	16	0.346
160	160	0.449
161	161	0.798
162	162	0.611
163	163	0.413
164	164	0.203
165	165	0.115
166	166	0.0444
167	167	0.953
168	168	0.831
169	169	0.812
17	17	0.66
18	18	0.0928
19	19	0.913
2	2	0.646
20	20	0.684
21	21	0.754
22	22	0.891
23	23	0.126
24	24	0.604
25	25	0.661
26	26	0.441
27	27	0.427
28	28	0.553
29	29	0.387
3	3	0.882
30	30	0.239
31	31	0.976
32	32	0.00542
33	33	0.0912
34	34	0.839
35	35	0.521
36	36	0.0441
37	37	0.202
38	38	0.533
39	39	0.471
4	4	0.454
40	40	0.107
41	41	0.591
42	42	0.65
43	43	0.397
44	44	0.673
45	45	0.954
46	46	0.75
47	47	0.876
48	48	0.704
49	49	0.0349
5	5	0.963
50	50	0.834
51	51	0.304
52	52	0.435
53	53	0.199
54	54	0.964
55	55	0.423
56	56	0.36
57	57	0.846
58	58	0.529
59	59	0.817
6	6	0.276
60	60	0.337
61	61	0.281
62	62	0.805
63	63	0.82
64	64	0.783
65	65	0.958
66	66	0.971
67	67	0.459
68	68	0.636
69	69	0.745
7	7	0.899
70	70	0.528
71	71	0.48
72	72	0.138
73	73	0.00343
74	74	0.633
75	75	0.652
76	76	0.71
77	77	0.0655
78	78	0.279
79	79	0.813
8	8	0.878
80	80	0.576
81	81	0.251
82	82	0.439
83	83	0.42
84	84	0.837
85	85	0.806
86	86	0.16
87	87	0.00162
88	88	0.813
89	89	0.325
9	9	0.937
90	90	0.979
91	91	0.32
92	92	0.771
93	93	0.966
94	94	0.889
95	95	0.22
96	96	0.208
97	97	0.517
98	98	0.0264
99	99	0.0554

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12043

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000169 human smooth muscle cell of the brachiocephalic vasculature sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0000222 (mesodermal cell)
0002589 (smooth muscle cell of the brachiocephalic vasculature)
0000355 (multi-potent skeletal muscle stem cell)
0000514 (smooth muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001134 (skeletal muscle tissue)
0001637 (artery)
0002100 (trunk)
0000483 (epithelium)
0000926 (mesoderm)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000025 (tube)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0003914 (epithelial tube)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0003509 (arterial blood vessel)
0004573 (systemic artery)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0001981 (blood vessel)
0002049 (vasculature)
0000486 (multilaminar epithelium)
0007500 (epithelial tube open at both ends)
0003104 (mesenchyme)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0007798 (vascular system)
0001015 (musculature)
0002532 (epiblast (generic))
0001529 (brachiocephalic artery)
0002329 (somite)
0002204 (musculoskeletal system)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0000383 (musculature of body)
0007204 (brachiocephalic vasculature)
0004572 (arterial system)
0004537 (blood vasculature)
0003077 (paraxial mesoderm)
0004290 (dermomyotome)
0009142 (entire embryonic mesenchyme)
0003081 (lateral plate mesoderm)
0001009 (circulatory system)
0006603 (presumptive mesoderm)
0003082 (myotome)
0004872 (splanchnic layer of lateral plate mesoderm)
0006965 (vascular cord)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr20:30433396..30433414,-!p1@FOXS1!1.61!39.65!FOXS1;;chr8:55370487..55370503,+!p1@SOX17!1.56!35.35!SOX17;;chr8:106330656..106330684,+!p1@ZFPM2!1.36!56.68!ZFPM2;;chr4:174451370..174451387,-!p1@HAND2!1.29!18.46!HAND2;;chr11:34642612..34642646,+!p1@EHF!1.25!16.89!EHF;;chr11:65686802..65686818,+!p6@DRAP1!1.20!25.62!DRAP1;;chr18:19749541..19749557,+!p1@GATA6!1.16!42.22!GATA6;;chr8:106330696..106330719,+!p2@ZFPM2!1.16!17.03!ZFPM2;;chr6:126240380..126240430,+!p2@NCOA7!1.15!34.35!NCOA7;;chr18:19749386..19749404,+!p2@GATA6!1.07!15.60!GATA6;;chr4:174450089..174450153,-!p2@HAND2!1.07!10.88!HAND2;;chr7:1577899..1577943,+!p3@MAFK!1.06!10.59!MAFK;;chr12:80085061..80085119,-!p6@PAWR!1.04!15.89!PAWR;;chr6:126070769..126070801,+!p1@HEY2!1.01!10.73!HEY2;;chr21:38071430..38071456,+!p1@SIM2!1.01!9.30!SIM2;;chr9:35732647..35732678,+!p2@CREB3!0.98!49.23!CREB3;;chr6:126240463..126240489,+!p6@NCOA7!0.98!9.59!NCOA7;;chr11:65686732..65686756,+!p2@DRAP1!0.97!36.21!DRAP1;;chr3:25469724..25469773,+!p1@RARB!0.96!12.02!RARB;;chr12:66218836..66218888,+!p1@HMGA2!0.95!77.00!HMGA2;;chr6:126240442..126240459,+!p4@NCOA7!0.95!10.30!NCOA7;;chr12:66218904..66218913,+!p11@HMGA2!0.91!7.16!HMGA2;;chr3:25470156..25470227,+!p2@RARB!0.91!7.16!RARB;;chr9:35732514..35732530,+!p5@CREB3!0.88!9.59!CREB3;;chr6:10415276..10415341,-!p2@TFAP2A!0.88!8.16!TFAP2A;;chr3:141087393..141087426,+!p3@ZBTB38!0.86!25.91!ZBTB38;;chr12:66218598..66218645,+!p2@HMGA2!0.85!30.06!HMGA2;;chr3:25469815..25469866,+!p3@RARB!0.85!6.15!RARB;;chr8:106330543..106330554,+!p4@ZFPM2!0.85!6.01!ZFPM2;;chr12:66218923..66218934,+!p14@HMGA2!0.84!5.87!HMGA2;;chr11:65687362..65687436,+!p3@DRAP1!0.82!27.48!DRAP1;;chr15:67458861..67458879,+!p17@SMAD3!0.81!5.44!SMAD3;;chr12:80085120..80085156,-!p14@PAWR!0.79!5.15!PAWR;;chr1:151032782..151032801,+!p4@MLLT11!0.77!10.45!MLLT11;;chr11:65687882..65687902,+!p10@DRAP1!0.77!7.01!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!0.75!5.44!PRRX1;;chr8:72756637..72756664,-!p3@MSC!0.75!5.30!MSC;;chr2:66662281..66662308,+!p1@MEIS1!0.74!17.17!MEIS1;;chr6:126102292..126102329,+!p3@NCOA7!0.72!15.46!NCOA7;;chr11:65687222..65687240,+!p7@DRAP1!0.72!5.58!DRAP1;;chr9:35732592..35732640,+!p1@CREB3!0.71!61.54!CREB3;;chr8:72756667..72756736,-!p2@MSC!0.71!6.87!MSC;;chr17:46132044..46132080,+!p4@NFE2L1!0.71!4.15!NFE2L1;;chr8:72756267..72756296,-!p4@MSC!0.70!6.15!MSC;;chr12:80084137..80084165,-!p10@PAWR!0.70!5.44!PAWR;;chr1:151032739..151032748,+!p6@MLLT11!0.70!5.15!MLLT11;;chr6:126240356..126240379,+!p7@NCOA7!0.70!5.01!NCOA7;;chr11:65687158..65687216,+!p4@DRAP1!0.69!25.48!DRAP1;;chr15:42749722..42749739,-!p2@ZFP106!0.69!7.44!ZFP106;;chr1:8938709..8938720,-!p3@ENO1!0.68!210.11!ENO1;;chr3:178789522..178789564,-!p2@ZMAT3!0.68!31.63!ZMAT3;;chr1:151032860..151032918,+!p1@MLLT11!0.66!49.38!MLLT11;;chr9:35732561..35732587,+!p3@CREB3!0.66!17.17!CREB3;;chr9:16705069..16705086,-!p3@BNC2!0.66!3.58!BNC2;;chr3:141087454..141087465,+!p19@ZBTB38!0.66!3.58!ZBTB38;;chr7:150945865..150945896,-!p4@SMARCD3!0.66!3.58!SMARCD3;;chr2:85980951..85981004,+!p1@ATOH8!0.65!6.01!ATOH8;;chr16:86600870..86600921,+!p2@FOXC2!0.65!3.43!FOXC2;;chr3:168865194..168865245,-!p3@MECOM!0.64!4.58!MECOM;;chr1:23885981..23886002,-!p1@ID3!0.63!680.85!ID3;;chr8:145159846..145159889,+!p6@MAF1!0.63!5.01!MAF1;;chr1:170633348..170633399,+!p2@PRRX1!0.63!4.72!PRRX1;;chr12:77459306..77459365,-!p1@E2F7!0.62!47.23!E2F7;;chr12:80084167..80084197,-!p5@PAWR!0.62!8.44!PAWR;;chr1:151032922..151032951,+!p2@MLLT11!0.62!5.72!MLLT11;;chr15:67418177..67418204,+!p9@SMAD3!0.62!3.15!SMAD3;;chr15:67458491..67458505,+!p18@SMAD3!0.62!3.15!SMAD3;;chr2:85981107..85981120,+!p3@ATOH8!0.62!3.15!ATOH8;;chr1:37940170..37940190,+!p1@ZC3H12A!0.61!45.08!ZC3H12A;;chr14:62162285..62162296,+!p3@HIF1A!0.61!19.04!HIF1A;;chr3:168864315..168864339,-!p2@MECOM!0.61!5.58!MECOM;;chr1:170632959..170632987,+!p4@PRRX1!0.61!3.43!PRRX1;;chr15:67418047..67418093,+!p4@SMAD3!0.60!4.01!SMAD3;;chr15:83953397..83953425,-!p1@BNC1!0.60!3.58!BNC1;;chr1:170632285..170632309,+!p1@PRRX1!0.60!3.43!PRRX1;;chr15:67458836..67458859,+!p22@SMAD3!0.60!3.01!SMAD3;;chr17:46126136..46126152,+!p1@NFE2L1!0.59!181.48!NFE2L1;;chr22:38598086..38598105,+!p1@MAFF!0.59!37.36!MAFF;;chr12:27485762..27485776,+!p3@ARNTL2!0.59!8.87!ARNTL2;;chr7:19157043..19157088,-!p2@TWIST1!0.59!8.44!TWIST1;;chr4:174451350..174451363,-!p3@HAND2!0.59!2.86!HAND2;;chr14:62162258..62162269,+!p2@HIF1A!0.58!32.92!HIF1A;;chr16:86600426..86600441,+!p1@FOXC2!0.57!7.73!FOXC2;;chr3:157823517..157823562,-!p1@SHOX2!0.57!3.01!SHOX2;;chr2:85981073..85981091,+!p5@ATOH8!0.57!2.72!ATOH8;;chr6:10412600..10412637,-!p1@TFAP2A!0.56!4.87!TFAP2A;;chr7:17338266..17338282,+!p1@AHR!0.55!34.35!AHR;;chr7:17338324..17338341,+!p3@AHR!0.55!10.30!AHR;;chr5:139487608..139487663,+!p3@PURA!0.55!6.30!PURA;;chr11:65687243..65687276,+!p8@DRAP1!0.55!3.72!DRAP1;;chr16:29819446..29819471,+!p9@MAZ!0.54!8.87!MAZ;;chr3:170076314..170076334,+!p2@SKIL!0.54!3.43!SKIL;;chr11:120107344..120107351,+!p1@POU2F3!0.54!3.15!POU2F3;;chr3:169381420..169381535,-!p1@MECOM!0.54!3.01!MECOM;;chr16:86612320..86612394,+!p1@FOXL1!0.54!2.43!FOXL1;;chr2:231280954..231280965,+!p2@SP100!0.53!5.01!SP100;;chr19:33865009..33865090,+!p3@CEBPG!0.53!3.43!CEBPG;;chr12:27485785..27485816,+!p1@ARNTL2!0.52!20.61!ARNTL2;;chr18:19749517..19749531,+!p3@GATA6!0.52!4.72!GATA6;;chr11:46299539..46299620,+!p2@CREB3L1!0.52!4.44!CREB3L1;;chr1:164528911..164528940,+!p7@PBX1!0.52!3.86!PBX1;;chr2:66662396..66662407,+!p4@MEIS1!0.52!2.29!MEIS1;;chr3:141087562..141087594,+!p12@ZBTB38!0.52!2.29!ZBTB38;;chr7:35293685..35293718,-!p1@TBX20!0.52!2.29!TBX20;;chr10:94449703..94449718,+!p1@HHEX!0.51!10.88!HHEX;;chr8:72756213..72756243,-!p5@MSC!0.51!3.15!MSC;;chr3:101568349..101568365,+!p1@NFKBIZ!0.50!149.85!NFKBIZ;;chr9:4300050..4300118,-!p1@GLIS3!0.50!18.46!GLIS3;;chr11:65686776..65686787,+!p9@DRAP1!0.50!2.72!DRAP1;;chr3:25470062..25470084,+!p4@RARB!0.50!2.15!RARB;;chr15:67430351..67430366,+!p10@SMAD3!0.50!2.15!SMAD3;;chr2:70142232..70142251,+!p1@MXD1!0.49!15.31!MXD1;;chr12:27485823..27485868,+!p2@ARNTL2!0.49!10.88!ARNTL2;;chr12:66218255..66218304,+!p3@HMGA2!0.49!6.87!HMGA2;;chr16:29819403..29819442,+!p5@MAZ!0.48!22.33!MAZ;;chr12:80084279..80084293,-!p8@PAWR!0.48!3.86!PAWR;;chr16:67881588..67881612,-!p2@CENPT!0.48!3.01!CENPT;;chr12:27485889..27485900,+!p4@ARNTL2!0.48!2.58!ARNTL2;;chr6:10412392..10412409,-!p4@TFAP2A!0.48!2.43!TFAP2A;;chr5:142780189..142780223,-!p6@NR3C1!0.48!2.00!NR3C1;;chr8:106330972..106330979,+!p7@ZFPM2!0.48!2.00!ZFPM2;;chr3:169381183..169381205,-!p4@MECOM!0.48!2.00!MECOM;;chr1:151032833..151032850,+!p3@MLLT11!0.47!5.44!MLLT11;;chr8:72756063..72756125,-!p1@MSC!0.47!4.72!MSC;;chr12:66218378..66218401,+!p6@HMGA2!0.47!3.43!HMGA2;;chr15:67418119..67418162,+!p5@SMAD3!0.47!2.29!SMAD3;;chr2:85980919..85980942,+!p4@ATOH8!0.47!2.15!ATOH8;;chr19:53758058..53758088,-!p2@ZNF677!0.46!8.01!ZNF677;;chr1:8934931..8934947,-!p4@ENO1!0.46!8.01!ENO1;;chr21:36260773..36260804,-!p7@RUNX1!0.46!2.86!RUNX1;;chr4:81118647..81118666,+!p1@PRDM8!0.46!2.72!PRDM8;;chr2:66662510..66662521,+!p6@MEIS1!0.46!1.86!MEIS1;;chr12:66218469..66218477,+!p16@HMGA2!0.46!1.86!HMGA2;;chr12:80084120..80084136,-!p15@PAWR!0.46!1.86!PAWR;;chr5:142780237..142780261,-!p7@NR3C1!0.46!1.86!NR3C1;;chr4:2263809..2263854,-!p1@MXD4!0.45!97.90!MXD4;;chr12:80084303..80084332,-!p1@PAWR!0.45!14.60!PAWR;;chr11:65686952..65686975,+!p5@DRAP1!0.45!13.60!DRAP1;;chr12:80084737..80084763,-!p3@PAWR!0.45!9.02!PAWR;;chr12:66218573..66218596,+!p7@HMGA2!0.45!3.15!HMGA2;;chr6:85473156..85473210,-!p2@TBX18!0.45!2.43!TBX18;;chr1:935467..935484,-!p1@HES4!0.44!10.59!HES4;;chr3:37217736..37217753,-!p2@LRRFIP2!0.44!9.88!LRRFIP2;;chr6:126112074..126112144,+!p1@NCOA7!0.43!32.63!NCOA7;;chr22:29196030..29196075,-!p5@XBP1!0.43!2.43!XBP1;;chr2:172950227..172950249,+!p2@DLX1!0.43!1.72!DLX1;;chr6:126102339..126102351,+!p12@NCOA7!0.43!1.72!NCOA7;;chr6:126240490..126240501,+!p11@NCOA7!0.43!1.72!NCOA7;;chr8:106330515..106330525,+!p6@ZFPM2!0.43!1.72!ZFPM2;;chr8:106330848..106330859,+!p5@ZFPM2!0.43!1.72!ZFPM2;;chr11:128563652..128563689,+!p3@FLI1!0.43!1.72!FLI1;;chr3:52001448..52001478,-!p2@PCBP4!0.42!32.92!PCBP4;;chr3:52001396..52001425,-!p4@PCBP4!0.42!3.58!PCBP4;;chr20:6748325..6748352,+!p1@BMP2!0.42!2.72!BMP2;;chr2:66662249..66662267,+!p2@MEIS1!0.41!8.30!MEIS1;;chr4:4861385..4861398,+!p1@MSX1!0.41!6.30!MSX1;;chr2:19558373..19558392,-!p1@OSR1!0.41!5.72!OSR1;;chr12:80084862..80084884,-!p7@PAWR!0.41!4.15!PAWR;;chr11:125034640..125034655,+!p1@PKNOX2!0.41!1.57!PKNOX2;;chr8:40755333..40755352,-!p1@ZMAT4!0.41!1.57!ZMAT4;;chr8:72756380..72756427,-!p8@MSC!0.41!1.57!MSC;;chr1:170633058..170633084,+!p5@PRRX1!0.41!1.57!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!0.41!1.57!KLF17;;chr7:26191809..26191890,+!p1@NFE2L3!0.40!10.59!NFE2L3;;chr3:71630980..71631110,-!p3@FOXP1!0.40!7.30!FOXP1;;chr3:52001426..52001447,-!p3@PCBP4!0.40!5.72!PCBP4;;chr2:85981222..85981259,+!p2@ATOH8!0.40!3.01!ATOH8;;chr3:71355163..71355209,-!p5@FOXP1!0.40!2.43!FOXP1;;chr12:66218443..66218461,+!p8@HMGA2!0.40!2.15!HMGA2;;chr10:64134120..64134183,+!p1@ZNF365!0.40!2.00!ZNF365;;chr7:64467057..64467078,-!p1@ZNF117!0.39!41.79!ZNF117;;chr2:145275162..145275202,-!p2@ZEB2!0.39!12.45!ZEB2;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!0.39!7.87!HNRPK;;chr19:42636586..42636607,-!p1@POU2F2!0.39!5.44!POU2F2;;chr1:935398..935465,-!p2@HES4!0.39!3.86!HES4;;chr19:52956798..52956843,+!p1@ZNF578!0.39!3.72!ZNF578;;chr1:2985760..2985774,+!p1@PRDM16!0.39!1.43!PRDM16;;chr15:66994718..66994729,+!p4@SMAD6!0.39!1.43!SMAD6;;chr18:19749353..19749367,+!p4@GATA6!0.39!1.43!GATA6;;chr18:19749504..19749515,+!p5@GATA6!0.39!1.43!GATA6;;chr11:34642656..34642667,+!p2@EHF!0.39!1.43!EHF;;chr12:115122318..115122331,-!p2@TBX3!0.39!1.43!TBX3;;chr2:85981008..85981025,+!p7@ATOH8!0.39!1.43!ATOH8;;chr3:71294304..71294332,-!p35@FOXP1!0.39!1.43!FOXP1;;chr19:57791328..57791377,+!p2@ZNF460!0.38!25.76!ZNF460;;chr19:57999101..57999158,+!p1@ZNF419!0.38!14.17!ZNF419;;chr19:58694421..58694485,+!p1@ZNF274!0.38!11.02!ZNF274;;chr1:114302066..114302080,-!p2@PHTF1!0.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NF491;;chr11:7041554..7041602,-!p1@ZNF214!0.18!1.86!ZNF214;;chr3:185826814..185826825,-!p3@ETV5!0.18!1.72!ETV5;;chr2:185463247..185463263,+!p1@ZNF804A!0.18!1.57!ZNF804A;;chr3:150126038..150126052,+!p8@TSC22D2!0.18!1.57!TSC22D2;;chr19:47922750..47922795,-!p1@MEIS3!0.18!1.43!MEIS3;;chr16:1429674..1429703,-!p3@UNKL!0.18!1.43!UNKL;;chr19:17356189..17356221,-!p2@NR2F6!0.18!1.43!NR2F6;;chr6:21597600..21597664,+!p3@SOX4!0.18!1.43!SOX4;;chr19:53496768..53496799,-!p1@ZNF702P!0.18!1.29!ZNF702P;;chr13:27998871..27998884,+!p4@GTF3A!0.18!1.29!GTF3A;;chr19:58978463..58978476,+!p2@ZNF324!0.18!1.14!ZNF324;;chr2:166326200..166326216,+!p1@CSRNP3!0.18!1.14!CSRNP3;;chr11:57103283..57103290,-!p3@SSRP1!0.18!1.00!SSRP1;;chr16:68573640..68573660,+!p3@ZFP90!0.18!1.00!ZFP90;;chr15:67358269..67358272,+!p15@SMAD3!0.18!0.86!SMAD3;;chr20:48807548..48807572,+!p14@CEBPB!0.18!0.86!CEBPB;;chr9:4300004..4300015,-!p6@GLIS3!0.18!0.72!GLIS3;;chr4:57774042..57774114,+!p1@REST!0.17!32.06!REST;;chr2:85198369..85198483,+!p2@KCMF1!0.17!15.03!KCMF1;;chr6:21597765..21597779,+!p2@SOX4!0.17!10.16!SOX4;;chr19:58740266..58740297,+!p1@ZNF544!0.17!8.87!ZNF544;;chr19:56915668..56915732,+!p1@ZNF583!0.17!4.15!ZNF583;;chr4:57775059..57775139,+!p2@REST!0.17!3.86!REST;;chr14:65569101..65569119,-!p3@MAX!0.17!3.43!MAX;;chr2:74229812..74229867,+!p1@TET3!0.17!2.58!TET3;;chr8:48650982..48651023,-!p3@CEBPD!0.17!2.58!CEBPD;;chr2:75937794..75937867,-!p2@GCFC2!0.17!2.15!GCFC2;;chr19:12203100..12203132,+!p1@ZNF788!0.17!1.86!ZNF788;;chr17:79885537..79885554,-!p2@MAFG!0.17!1.72!MAFG;;chr1:26496459..26496470,+!p2@ZNF593!0.17!1.72!ZNF593;;chr2:214015111..214015179,-!p1@IKZF2!0.17!1.57!IKZF2;;chr17:7382891..7382905,-!p7@ZBTB4!0.17!1.43!ZBTB4;;chr17:79885633..79885645,-!p4@MAFG!0.17!1.43!MAFG;;chr10:22292675..22292686,-!p3@DNAJC1!0.17!1.43!DNAJC1;;chr4:81104895..81104920,+!p2@PRDM8!0.17!1.14!PRDM8;;chr19:57792157..57792170,+!p6@ZNF460!0.17!1.14!ZNF460;;chr8:135725369..135725388,-!p3@ZFAT!0.17!1.00!ZFAT;;chr19:50431973..50431998,+!p5@ATF5!0.17!0.86!ATF5;;chr1:221052994..221053008,+!p6@HLX!0.17!0.72!HLX;;chr6:56954919..56955000,+!p1@ZNF451!0.16!25.76!ZNF451;;chr4:10459009..10459061,-!p1@ZNF518B!0.16!11.02!ZNF518B;;chr19:50529247..50529296,+!p1@ZNF473!0.16!7.73!ZNF473;;chr9:14314131..14314147,-!p2@NFIB!0.16!6.58!NFIB;;chr19:38146320..38146401,-!p1@ZFP30!0.16!6.44!ZFP30;;chr19:58400372..58400411,-!p1@ZNF814!0.16!6.01!ZNF814;;chr19:58090240..58090289,-!p1@ZNF416!0.16!5.72!ZNF416;;chr17:47492252..47492265,-!p2@PHB!0.16!4.58!PHB;;chr1:67396044..67396071,+!p3@MIER1!0.16!3.86!MIER1;;chr3:52719546..52719636,-!p3@PBRM1!0.16!3.86!PBRM1;;chr1:61547894..61547968,+!p2@NFIA!0.16!3.01!NFIA;;chr16:1429627..1429662,-!p2@UNKL!0.16!3.01!UNKL;;chr1:42800848..42800859,-!p2@FOXJ3!0.16!2.86!FOXJ3;;chr4:121843844..121843904,-!p1@PRDM5!0.16!2.29!PRDM5;;chr14:61191018..61191048,-!p1@SIX4!0.16!2.00!SIX4;;chr1:151032142..151032195,+!p5@MLLT11!0.16!1.72!MLLT11;;chr20:25677399..25677433,-!p3@ZNF337!0.16!1.72!ZNF337;;chr5:142784101..142784130,-!p4@NR3C1!0.16!1.57!NR3C1;;chr14:100705587..100705600,+!p5@YY1!0.16!1.57!YY1;;chr2:145277882..145277967,-!p3@ZEB2!0.16!1.43!ZEB2;;chr9:16870710..16870763,-!p1@BNC2!0.16!1.43!BNC2;;chr9:4300016..4300039,-!p2@GLIS3!0.16!1.43!GLIS3;;chr7:137686763..137686784,-!p5@CREB3L2!0.16!1.43!CREB3L2;;chr19:12444440..12444455,-!p1@ZNF563!0.16!1.43!ZNF563;;chr6:21594845..21594908,+!p6@SOX4!0.16!1.29!SOX4;;chr8:73921136..73921151,+!p2@TERF1!0.16!1.14!TERF1;;chr19:57999082..57999095,+!p2@ZNF419!0.16!1.14!ZNF419;;chr18:3449695..3449712,+!p9@TGIF1!0.16!1.14!TGIF1;;chr15:57210692..57210713,-!p5@ZNF280D!0.16!1.00!ZNF280D;;chr10:63809090..63809097,+!p7@ARID5B!0.16!1.00!ARID5B;;chr14:35872926..35872951,-!p4@NFKBIA!0.16!1.00!NFKBIA;;chr19:52391220..52391251,-!p2@ZNF577!0.16!1.00!ZNF577;;chr1:41157671..41157695,+!p6@NFYC!0.16!1.00!NFYC;;chr20:50179368..50179392,-!p2@NFATC2!0.16!0.86!NFATC2;;chr19:20011731..20011743,+!p3@ZNF93!0.16!0.86!ZNF93;;chr6:43139102..43139112,+!p7@SRF!0.16!0.86!SRF;;chr5:92918860..92918871,+!p10@NR2F1!0.16!0.57!NR2F1;;chr18:3447617..3447633,+!p20@TGIF1!0.16!0.57!TGIF1;;chr15:66995062..66995065,+!p8@SMAD6!0.16!0.43!SMAD6;;chr15:83953474..83953483,-!p3@BNC1!0.16!0.43!BNC1;;chr16:30406423..30406447,+!p4@ZNF48!0.16!0.43!ZNF48;;chr16:86612112..86612123,+!p5@FOXL1!0.16!0.43!FOXL1;;chr17:40540591..40540600,-!p3@STAT3!0.16!0.43!STAT3;;chr17:41623716..41623727,-!p12@ETV4!0.16!0.43!ETV4;;chr17:46131916..46131952,+!p7@NFE2L1!0.16!0.43!NFE2L1;;chr17:59477266..59477273,+!p6@TBX2!0.16!0.43!TBX2;;chr17:7387486..7387497,-!p11@ZBTB4!0.16!0.43!ZBTB4;;chr18:53068893..53068902,-!p28@TCF4!0.16!0.43!TCF4;;chr18:53255323..53255332,-!p31@TCF4!0.16!0.43!TCF4;;chr18:53256971..53256984,-!p26@TCF4!0.16!0.43!TCF4;;chr19:13136057..13136085,+!p11@NFIX!0.16!0.43!NFIX;;chr19:1863437..1863446,-!p5@KLF16!0.16!0.43!KLF16;;chr19:22193731..22193751,-!p1@ZNF208!0.16!0.43!ZNF208;;chr19:37464453..37464515,+!p4@ZNF568!0.16!0.43!ZNF568;;chr5:142782862..142782881,-!p11@NR3C1!0.16!0.43!NR3C1;;chr5:158527139..158527161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FF:11433-118H2: Difference between revisions

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Revision as of 17:42, 29 June 2012

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0