FFCP PHASE1:Hg19::chr10:91011548..91011636,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002194!7.68e-19!63;CL:0000576!7.68e-19!63;CL:0000040!7.68e-19!63;CL:0000559!7.68e-19!63;CL:0002009!8.01e-17!65;CL:0002057!1.28e-16!42;CL:0000839!1.95e-15!70;CL:0000557!6.48e-15!71;CL:0000860!4.93e-14!45;CL:0000766!8.24e-14!76;CL:0000723!9.57e-12!436;CL:0000048!1.14e-11!430;CL:0002087!1.20e-10!119;CL:0000034!2.69e-10!444;CL:0002320!3.65e-09!365;CL:0000134!8.62e-09!358;CL:0002371!1.27e-08!591;CL:0002031!2.80e-08!124;CL:0000219!1.53e-07!390 | |ontology_enrichment_celltype=CL:0002194!7.68e-19!63;CL:0000576!7.68e-19!63;CL:0000040!7.68e-19!63;CL:0000559!7.68e-19!63;CL:0002009!8.01e-17!65;CL:0002057!1.28e-16!42;CL:0000839!1.95e-15!70;CL:0000557!6.48e-15!71;CL:0000860!4.93e-14!45;CL:0000766!8.24e-14!76;CL:0000723!9.57e-12!436;CL:0000048!1.14e-11!430;CL:0002087!1.20e-10!119;CL:0000034!2.69e-10!444;CL:0002320!3.65e-09!365;CL:0000134!8.62e-09!358;CL:0002371!1.27e-08!591;CL:0002031!2.80e-08!124;CL:0000219!1.53e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.21e-13;39!CL:0000234;3.21e-13;39!CL:0000860;6.58e-12;33!CL:0002057;6.58e-12;33!CL:0000576;8.81e-12;48!CL:0000766;9.65e-08;69 | |ontology_enrichment_celltype_v019=CL:0000473;3.21e-13;39!CL:0000234;3.21e-13;39!CL:0000860;6.58e-12;33!CL:0002057;6.58e-12;33!CL:0000576;8.81e-12;48!CL:0000766;9.65e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.54e-22,59;CL:0000576,2.54e-22,59;CL:0000040,2.54e-22,59;CL:0000559,2.54e-22,59;CL:0000473,1.62e-20,48;CL:0000234,1.62e-20,48;CL:0002009,5.70e-20,61;CL:0000839,2.98e-18,66;CL:0000557,1.22e-17,67;CL:0000860,1.28e-16,42;CL:0002057,1.28e-16,42;CL:0000766,2.80e-16,72;CL:0000723,1.36e-12,433;CL:0000048,1.62e-12,427;CL:0002087,3.27e-12,115;CL:0000034,4.41e-11,441;CL:0002320,9.30e-10,361;CL:0002031,1.42e-09,120;CL:0000134,2.25e-09,354;CL:0000219,4.66e-08,386;CL:0000738,1.21e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.62e-12;42 | |ontology_enrichment_development_v019=CL:0002057;4.62e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.09e-18!112;UBERON:0002390!5.95e-17!102;UBERON:0003061!5.95e-17!102;UBERON:0002405!1.22e-15!115;UBERON:0002371!3.55e-15!80;UBERON:0002204!1.00e-14!167;UBERON:0004765!1.20e-13!101;UBERON:0001434!1.20e-13!101;UBERON:0001474!6.37e-13!86;UBERON:0002384!1.89e-08!375;UBERON:0000062!2.28e-08!511;UBERON:0003081!2.53e-08!216;UBERON:0000467!1.41e-07!625;UBERON:0000480!2.44e-07!626 | |ontology_enrichment_uberon=UBERON:0002193!5.09e-18!112;UBERON:0002390!5.95e-17!102;UBERON:0003061!5.95e-17!102;UBERON:0002405!1.22e-15!115;UBERON:0002371!3.55e-15!80;UBERON:0002204!1.00e-14!167;UBERON:0004765!1.20e-13!101;UBERON:0001434!1.20e-13!101;UBERON:0001474!6.37e-13!86;UBERON:0002384!1.89e-08!375;UBERON:0000062!2.28e-08!511;UBERON:0003081!2.53e-08!216;UBERON:0000467!1.41e-07!625;UBERON:0000480!2.44e-07!626 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.61e-20,108;UBERON:0002390,2.75e-19,98;UBERON:0003061,2.75e-19,98;UBERON:0002405,7.98e-19,93;UBERON:0002371,1.01e-17,76;UBERON:0004765,5.35e-17,90;UBERON:0002204,7.66e-17,167;UBERON:0001434,6.35e-16,100;UBERON:0001474,4.24e-15,82;UBERON:0000926,1.03e-11,315;UBERON:0004120,1.03e-11,315;UBERON:0006603,1.03e-11,315;UBERON:0003081,6.93e-10,203;UBERON:0002384,5.19e-09,371 | |||
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| ||
|short_description=p1@LIPA | |short_description=p1@LIPA | ||
}} | }} |
Revision as of 20:40, 17 November 2012
Short description: | p1@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LIPA_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -16bp_to_ENST00000542307_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | F5H6K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.54e-22 | 59 |
monocyte | 2.54e-22 | 59 |
monoblast | 2.54e-22 | 59 |
promonocyte | 2.54e-22 | 59 |
defensive cell | 1.62e-20 | 48 |
phagocyte | 1.62e-20 | 48 |
macrophage dendritic cell progenitor | 5.70e-20 | 61 |
myeloid lineage restricted progenitor cell | 2.98e-18 | 66 |
granulocyte monocyte progenitor cell | 1.22e-17 | 67 |
classical monocyte | 1.28e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-16 | 42 |
myeloid leukocyte | 2.80e-16 | 72 |
somatic stem cell | 1.36e-12 | 433 |
multi fate stem cell | 1.62e-12 | 427 |
nongranular leukocyte | 3.27e-12 | 115 |
stem cell | 4.41e-11 | 441 |
connective tissue cell | 9.30e-10 | 361 |
hematopoietic lineage restricted progenitor cell | 1.42e-09 | 120 |
mesenchymal cell | 2.25e-09 | 354 |
motile cell | 4.66e-08 | 386 |
leukocyte | 1.21e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.61e-20 | 108 |
hematopoietic system | 2.75e-19 | 98 |
blood island | 2.75e-19 | 98 |
immune system | 7.98e-19 | 93 |
bone marrow | 1.01e-17 | 76 |
skeletal element | 5.35e-17 | 90 |
musculoskeletal system | 7.66e-17 | 167 |
skeletal system | 6.35e-16 | 100 |
bone element | 4.24e-15 | 82 |
mesoderm | 1.03e-11 | 315 |
mesoderm-derived structure | 1.03e-11 | 315 |
presumptive mesoderm | 1.03e-11 | 315 |
lateral plate mesoderm | 6.93e-10 | 203 |
connective tissue | 5.19e-09 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.