FFCP PHASE1:Hg19::chr22:37257002..37257013,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!1.20e-70!172;CL:0000566!1.20e-70!172;CL:0002032!1.51e-68!165;CL:0000837!1.51e-68!165;CL:0000988!3.32e-66!182;CL:0000763!1.53e-63!112;CL:0000049!1.53e-63!112;CL:0000738!3.32e-54!140;CL:0000766!1.53e-51!76;CL:0002031!5.17e-47!124;CL:0000557!1.93e-44!71;CL:0000839!4.98e-43!70;CL:0002087!8.83e-43!119;CL:0002194!1.61e-39!63;CL:0000576!1.61e-39!63;CL:0000040!1.61e-39!63;CL:0000559!1.61e-39!63;CL:0002009!2.08e-39!65;CL:0002057!2.24e-32!42;CL:0000860!4.33e-29!45;CL:0000134!3.15e-13!358;CL:0002320!2.88e-12!365;CL:0000945!2.05e-09!24;CL:0000826!2.05e-09!24;CL:0000219!5.11e-09!390;CL:0000094!5.18e-09!8;CL:0000838!7.69e-08!52;CL:0000542!1.56e-07!53;CL:0000051!1.56e-07!53;CL:0002393!4.34e-07!9;CL:0002397!4.34e-07!9 | |ontology_enrichment_celltype=CL:0000037!1.20e-70!172;CL:0000566!1.20e-70!172;CL:0002032!1.51e-68!165;CL:0000837!1.51e-68!165;CL:0000988!3.32e-66!182;CL:0000763!1.53e-63!112;CL:0000049!1.53e-63!112;CL:0000738!3.32e-54!140;CL:0000766!1.53e-51!76;CL:0002031!5.17e-47!124;CL:0000557!1.93e-44!71;CL:0000839!4.98e-43!70;CL:0002087!8.83e-43!119;CL:0002194!1.61e-39!63;CL:0000576!1.61e-39!63;CL:0000040!1.61e-39!63;CL:0000559!1.61e-39!63;CL:0002009!2.08e-39!65;CL:0002057!2.24e-32!42;CL:0000860!4.33e-29!45;CL:0000134!3.15e-13!358;CL:0002320!2.88e-12!365;CL:0000945!2.05e-09!24;CL:0000826!2.05e-09!24;CL:0000219!5.11e-09!390;CL:0000094!5.18e-09!8;CL:0000838!7.69e-08!52;CL:0000542!1.56e-07!53;CL:0000051!1.56e-07!53;CL:0002393!4.34e-07!9;CL:0002397!4.34e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.07e-39;39!CL:0000234;6.07e-39;39!CL:0000860;4.46e-37;33!CL:0002057;4.46e-37;33!CL:0000576;2.13e-33;48!CL:0000763;1.52e-32;100!CL:0000766;1.49e-30;69!CL:0000988;5.02e-13;177!CL:0000738;9.95e-12;136!CL:0000094;2.82e-11;8!CL:0000235;1.26e-10;6!CL:0002087;3.68e-10;104!CL:0000081;8.50e-08;11 | |ontology_enrichment_celltype_v019=CL:0000473;6.07e-39;39!CL:0000234;6.07e-39;39!CL:0000860;4.46e-37;33!CL:0002057;4.46e-37;33!CL:0000576;2.13e-33;48!CL:0000763;1.52e-32;100!CL:0000766;1.49e-30;69!CL:0000988;5.02e-13;177!CL:0000738;9.95e-12;136!CL:0000094;2.82e-11;8!CL:0000235;1.26e-10;6!CL:0002087;3.68e-10;104!CL:0000081;8.50e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.80e-90,108;CL:0000049,1.80e-90,108;CL:0002032,1.95e-71,161;CL:0000837,1.95e-71,161;CL:0000037,7.09e-71,168;CL:0000766,7.18e-70,72;CL:0000988,6.23e-66,177;CL:0000557,4.68e-61,67;CL:0000839,4.31e-57,66;CL:0002009,4.35e-55,61;CL:0002194,7.35e-55,59;CL:0000576,7.35e-55,59;CL:0000040,7.35e-55,59;CL:0000559,7.35e-55,59;CL:0000473,8.63e-51,48;CL:0000234,8.63e-51,48;CL:0000738,1.26e-46,136;CL:0000860,1.25e-41,42;CL:0002057,1.25e-41,42;CL:0002031,1.50e-40,120;CL:0002087,4.78e-35,115;CL:0000134,5.61e-20,354;CL:0002320,4.21e-19,361;CL:0000219,4.84e-16,386;CL:0000048,2.35e-12,427;CL:0000034,2.80e-12,441;CL:0000723,7.47e-12,433;CL:0000094,2.45e-11,8;CL:0000235,1.05e-10,6;CL:0000081,7.70e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.34e-30;42!CL:0000049;1.46e-24;108 | |ontology_enrichment_development_v019=CL:0002057;3.34e-30;42!CL:0000049;1.46e-24;108 | ||
|ontology_enrichment_disease=DOID:2531!3.11e-15!51;DOID:0060083!3.11e-15!51;DOID:8692!3.77e-15!31;DOID:1240!1.88e-14!39 | |ontology_enrichment_disease=DOID:2531!3.11e-15!51;DOID:0060083!3.11e-15!51;DOID:8692!3.77e-15!31;DOID:1240!1.88e-14!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.99e-25;31!DOID:1240;2.26e-16;39!DOID:2531;8.58e-10;51!DOID:0060083;8.58e-10;51 | |ontology_enrichment_disease_v019=DOID:8692;6.99e-25;31!DOID:1240;2.26e-16;39!DOID:2531;8.58e-10;51!DOID:0060083;8.58e-10;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,3.25e-26,31;DOID:1240,3.57e-21,39;DOID:2531,1.25e-15,51;DOID:0060083,1.25e-15,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.15e-51!102;UBERON:0003061!4.15e-51!102;UBERON:0002193!3.86e-46!112;UBERON:0002371!1.51e-39!80;UBERON:0001474!5.34e-35!86;UBERON:0002405!3.54e-28!115;UBERON:0004765!5.96e-27!101;UBERON:0001434!5.96e-27!101;UBERON:0007023!3.92e-13!115;UBERON:0003081!1.85e-12!216;UBERON:0002384!2.34e-11!375;UBERON:0000178!2.71e-09!15;UBERON:0000179!2.71e-09!15;UBERON:0000463!2.71e-09!15;UBERON:0002204!2.38e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!4.15e-51!102;UBERON:0003061!4.15e-51!102;UBERON:0002193!3.86e-46!112;UBERON:0002371!1.51e-39!80;UBERON:0001474!5.34e-35!86;UBERON:0002405!3.54e-28!115;UBERON:0004765!5.96e-27!101;UBERON:0001434!5.96e-27!101;UBERON:0007023!3.92e-13!115;UBERON:0003081!1.85e-12!216;UBERON:0002384!2.34e-11!375;UBERON:0000178!2.71e-09!15;UBERON:0000179!2.71e-09!15;UBERON:0000463!2.71e-09!15;UBERON:0002204!2.38e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.06e-09;15!UBERON:0000179;7.06e-09;15!UBERON:0000463;7.06e-09;15!UBERON:0002390;5.97e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.06e-09;15!UBERON:0000179;7.06e-09;15!UBERON:0000463;7.06e-09;15!UBERON:0002390;5.97e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.76e-62,98;UBERON:0003061,1.76e-62,98;UBERON:0002371,6.44e-56,76;UBERON:0002193,8.37e-55,108;UBERON:0001474,1.46e-50,82;UBERON:0002405,4.03e-46,93;UBERON:0004765,1.56e-44,90;UBERON:0001434,2.30e-38,100;UBERON:0003081,1.22e-21,203;UBERON:0002384,6.50e-18,371;UBERON:0002204,2.09e-16,167;UBERON:0000178,7.29e-09,15;UBERON:0000179,7.29e-09,15;UBERON:0000463,7.29e-09,15;UBERON:0000926,1.73e-08,315;UBERON:0004120,1.73e-08,315;UBERON:0006603,1.73e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,2.29881650459848,1.96776953284198,4.72037132218685,0.767658796194425,2.47705797305722,0,0,0,0.542270404062111,0.142169232487422,1.46800219667424,0.553995408531877,1.40381113229099,1.95309783644267,8.73270349535705,4.21061765824673,9.5302960024649,2.4717700592526,0.755751887377619,1.94067248950253,2.09186133215116,2.46700732813095,2.16794459626573,9.20615655430881,9.47794614157672,9.22280696565482,2.06847408441971,1.93645405075148,1.35426486594342,3.76484679085209,1.36453075028923,4.94391665779186,1.22433556948361,2.88836124368484,1.27867425159808,9.89553900560148,12.7656740877844,9.80316926225197,1.16083695451434,0,3.11411124497787,9.79869794501299,10.9511412868242,8.25317609879443,2.42159801053347,1.10483290796269,2.84816148696796,2.5350634357433,0.850417199860174,1.88692780957538,2.92054440980887,2.4028302854641,1.44653028027372,1.42506371870624,0.99458338599545,0.730656615058536,1.75996244461323,0.546138611262131,0,2.56038133539904,1.60158394814405,3.4485146397269,0.661044872784862,0,1.70763890732835,0,0.764546456250458,2.64342657158052,1.12101712596307,0.790152254325231,0,0.393010762749165,0.205601498999509,2.17342444007882,0.651844533267181,0,0,2.1167986808183,2.06224135232386,0.886135578334485,1.08321545506006,1.79327847615945,1.69077151827842,2.13769275984779,2.48715016007264,0.869409257205157,0,0,0,1.24640276967323,0,0,0.759059076058509,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0.97364218096405,0.696518949197069,1.19662164466979,0.476981248610684,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,42.6558290563158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64785916435973,2.34004265139238,2.82399208348584,0,0,0,0,0,0,0.985326475791887,4.13827639862162,2.07328115540772,2.30591925467138,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,7.5338563714819,6.32501818449095,0,0,0,0,0,0,0.672510863961164,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,6.74106321552464,5.9832291840805,17.8198670777495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,7.61171413848254,6.117097657139,8.54470780761244,6.19402616190251,6.17043409629291,10.3755729790835,6.48037724685738,3.96562588147135,0,0,0,0,2.59684583357601,0,0,2.19537308576098,14.3629027599275,6.98522822988813,1.62310970137278,14.3206560837864,1.36940807419915,2.97691801968744,0,8.29529711227856,5.13881840331838,4.64139326539409,3.83261613921294,2.40453741329035,2.45792611446766,2.68411329470899,3.17013369252626,3.12620952643264,0,0,10.0068601036114,6.6614393599564,7.04935025439248,0,0.439524537815682,0,0.334330152832435,0,0,0,0,0,0.281338832821026,0,0.494411622680279,0,0,1.93398740871803,0,0,0.738508832766417,0,0,0,6.13886844272246,0,7.18449277040819,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,1.56980256395025,2.16075186470203,0,0,0,0,1.74830236878417,0,0,0,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0.247127877893006,0.104421949505455,0.269604531922708,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,2.55493176133945,0,0.788662062837943,0.837847203816763,0,0,0.199679000498991,0.429226048136571,1.11585728720936,0.268733889946905,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.136203406111576,0,0,0,2.4747128070665,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,1.55975789423744,0,0,0,0,0,0,0,0,0.854299300541557,0.471612915298998,1.24271716604159,0.496166021811951,0.988058159489721,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0.3755727921195,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.59996218756479,2.66729324235352,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.91064876540519,1.41923792260222,0.460935950223117,0,0,0.131545547125698,0,0,0.313972371402056,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,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| ||
|short_description=p4@NCF4 | |short_description=p4@NCF4 | ||
}} | }} |
Revision as of 06:40, 20 November 2012
Short description: | p4@NCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NCF4_5end |
Coexpression cluster: | C2643_Eosinophils_acute_Neutrophils_CD14_Whole_Monocytederived_Macrophage |
Association with transcript: | -16bp_to_ENST00000248899, ENST00000397147, ENST00000447071, NM_000631, NM_013416, uc003apy.3, uc003apz.3_5end |
EntrezGene: | NCF4 |
HGNC: | 7662 |
UniProt: | Q15080A8K4F9B0QY04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.80e-90 | 108 |
common myeloid progenitor | 1.80e-90 | 108 |
hematopoietic oligopotent progenitor cell | 1.95e-71 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-71 | 161 |
hematopoietic stem cell | 7.09e-71 | 168 |
myeloid leukocyte | 7.18e-70 | 72 |
hematopoietic cell | 6.23e-66 | 177 |
granulocyte monocyte progenitor cell | 4.68e-61 | 67 |
myeloid lineage restricted progenitor cell | 4.31e-57 | 66 |
macrophage dendritic cell progenitor | 4.35e-55 | 61 |
monopoietic cell | 7.35e-55 | 59 |
monocyte | 7.35e-55 | 59 |
monoblast | 7.35e-55 | 59 |
promonocyte | 7.35e-55 | 59 |
defensive cell | 8.63e-51 | 48 |
phagocyte | 8.63e-51 | 48 |
leukocyte | 1.26e-46 | 136 |
classical monocyte | 1.25e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-41 | 42 |
hematopoietic lineage restricted progenitor cell | 1.50e-40 | 120 |
nongranular leukocyte | 4.78e-35 | 115 |
mesenchymal cell | 5.61e-20 | 354 |
connective tissue cell | 4.21e-19 | 361 |
motile cell | 4.84e-16 | 386 |
multi fate stem cell | 2.35e-12 | 427 |
stem cell | 2.80e-12 | 441 |
somatic stem cell | 7.47e-12 | 433 |
granulocyte | 2.45e-11 | 8 |
macrophage | 1.05e-10 | 6 |
blood cell | 7.70e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.76e-62 | 98 |
blood island | 1.76e-62 | 98 |
bone marrow | 6.44e-56 | 76 |
hemolymphoid system | 8.37e-55 | 108 |
bone element | 1.46e-50 | 82 |
immune system | 4.03e-46 | 93 |
skeletal element | 1.56e-44 | 90 |
skeletal system | 2.30e-38 | 100 |
lateral plate mesoderm | 1.22e-21 | 203 |
connective tissue | 6.50e-18 | 371 |
musculoskeletal system | 2.09e-16 | 167 |
blood | 7.29e-09 | 15 |
haemolymphatic fluid | 7.29e-09 | 15 |
organism substance | 7.29e-09 | 15 |
mesoderm | 1.73e-08 | 315 |
mesoderm-derived structure | 1.73e-08 | 315 |
presumptive mesoderm | 1.73e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.25e-26 | 31 |
leukemia | 3.57e-21 | 39 |
hematologic cancer | 1.25e-15 | 51 |
immune system cancer | 1.25e-15 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.