FFCP PHASE1:Mm9::chr6:48627672..48627688,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=291|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48627672..48627688,+|id=chr6:48627672..48627688,+|ontology_enrichment_celltype=CL:0000791!2.67e-20!9;CL:0000789!2.67e-20!9;CL:0002420!2.67e-20!9;CL:0002419!2.67e-20!9;CL:0000790!2.67e-20!9;CL:0000084!1.96e-19!11;CL:0000827!1.96e-19!11;CL:0000624!1.44e-18!8;CL:0000838!1.29e-17!12;CL:0000542!4.45e-16!13;CL:0000051!4.45e-16!13;CL:0000893!3.16e-14!6;CL:0002489!3.16e-14!6;CL:0000898!3.16e-14!6;CL:0000809!3.16e-14!6;CL:0000810!3.16e-14!6;CL:0000895!3.16e-14!6;CL:0000808!3.16e-14!6;CL:0000894!3.16e-14!6;CL:0000806!3.16e-14!6;CL:0000807!3.16e-14!6;CL:0000805!3.16e-14!6;CL:0002425!3.16e-14!6;CL:0002436!3.16e-14!6;CL:0002427!3.16e-14!6;CL:0002428!3.16e-14!6;CL:0002429!3.16e-14!6;CL:0002433!3.16e-14!6;CL:0002431!3.16e-14!6;CL:0002432!3.16e-14!6;CL:0000738!9.59e-12!17;CL:0002087!9.59e-12!17;CL:0002031!1.42e-10!25;CL:0000988!6.52e-09!32;CL:0002032!6.52e-09!32;CL:0000037!6.52e-09!32;CL:0000566!6.52e-09!32;CL:0000837!6.52e-09!32|ontology_enrichment_celltype_v019_2=CL:0000624,2.02e-77,8;CL:0000791,7.69e-69,9;CL:0000789,7.69e-69,9;CL:0002420,7.69e-69,9;CL:0002419,7.69e-69,9;CL:0000790,7.69e-69,9;CL:0000893,6.65e-58,6;CL:0002489,6.65e-58,6;CL:0000898,6.65e-58,6;CL:0000809,6.65e-58,6;CL:0000810,6.65e-58,6;CL:0000895,6.65e-58,6;CL:0000808,6.65e-58,6;CL:0000894,6.65e-58,6;CL:0000806,6.65e-58,6;CL:0000807,6.65e-58,6;CL:0000805,6.65e-58,6;CL:0002425,6.65e-58,6;CL:0002436,6.65e-58,6;CL:0002427,6.65e-58,6;CL:0002428,6.65e-58,6;CL:0002429,6.65e-58,6;CL:0002433,6.65e-58,6;CL:0002431,6.65e-58,6;CL:0002432,6.65e-58,6;CL:0000084,2.37e-56,11;CL:0000827,2.37e-56,11;CL:0000838,1.15e-51,12;CL:0000542,1.06e-47,13;CL:0000051,1.06e-47,13;CL:0000738,1.72e-36,17;CL:0002087,1.72e-36,17;CL:0002031,8.28e-25,25;CL:0000988,2.32e-19,32;CL:0002032,2.32e-19,32;CL:0000037,2.32e-19,32;CL:0000837,2.32e-19,32;CL:0002320,2.04e-13,46;CL:0000134,2.04e-13,46;CL:0000219,2.15e-11,54;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!7.37e-34!23;UBERON:0000974!7.37e-34!23;UBERON:0004807!7.37e-34!23;UBERON:0005058!7.37e-34!23;UBERON:0003351!7.37e-34!23;UBERON:0009113!7.37e-34!23;UBERON:0003295!7.37e-34!23;UBERON:0009722!7.37e-34!23;UBERON:0005562!7.37e-34!23;UBERON:0007690!7.37e-34!23;UBERON:0006562!3.19e-32!24;UBERON:0003408!3.19e-32!24;UBERON:0001557!3.19e-32!24;UBERON:0001042!3.19e-32!24;UBERON:0008814!3.19e-32!24;UBERON:0009145!3.19e-32!24;UBERON:0004177!2.35e-31!29;UBERON:0000072!4.81e-28!27;UBERON:0002193!1.79e-22!48;UBERON:0002390!3.78e-22!45;UBERON:0003061!3.78e-22!45;UBERON:0000063!2.06e-20!35;UBERON:0000065!1.69e-18!41;UBERON:0001004!6.30e-18!42;UBERON:0005057!5.18e-17!51;UBERON:0002405!9.39e-15!70;UBERON:0003929!7.25e-14!55;UBERON:0002368!2.12e-13!60;UBERON:0002530!6.36e-12!65;UBERON:0005911!4.86e-11!69;UBERON:0000490!1.26e-10!66;UBERON:0003081!2.51e-10!88;UBERON:0000949!3.29e-10!72;UBERON:0001041!1.39e-08!92;UBERON:0000077!7.84e-08!97;UBERON:0007811!1.24e-07!86;UBERON:0000064!1.52e-07!99;UBERON:0000153!2.21e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.87e-20,23;UBERON:0000974,1.87e-20,23;UBERON:0004807,1.87e-20,23;UBERON:0005058,1.87e-20,23;UBERON:0003351,1.87e-20,23;UBERON:0009113,1.87e-20,23;UBERON:0003295,1.87e-20,23;UBERON:0009722,1.87e-20,23;UBERON:0005562,1.87e-20,23;UBERON:0007690,1.87e-20,23;UBERON:0006562,1.33e-19,24;UBERON:0003408,1.33e-19,24;UBERON:0001557,1.33e-19,24;UBERON:0001042,1.33e-19,24;UBERON:0008814,1.33e-19,24;UBERON:0009145,1.33e-19,24;UBERON:0000072,2.03e-17,27;UBERON:0004177,3.27e-16,29;UBERON:0005057,3.27e-16,29;UBERON:0002384,2.04e-13,46;UBERON:0000077,2.04e-13,35;UBERON:0007811,4.86e-13,36;UBERON:0000065,1.97e-11,41;UBERON:0001004,3.72e-11,42;UBERON:0000153,6.83e-11,43;UBERON:0002390,2.12e-10,45;UBERON:0003061,2.12e-10,45;UBERON:0002193,9.74e-10,48;UBERON:0002405,9.74e-10,48;UBERON:0003929,1.80e-08,55;UBERON:0002368,9.62e-08,60;UBERON:0002530,3.98e-07,65;UBERON:0000490,5.16e-07,66|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.93684985162364,1.40788722151667,1.40438715793196,1.71217968225505,1.7549874978974,1.54080656938085,2.97229368224591,0,0,0,0.630924330716475,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.27338845544205,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.721172697119813,0.886137163047463,1.00966449948148,0.15241361331,0.705783295957884,0.487289403698762,0.577271049841977,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:48627672..48627688,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=291 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:48627672..48627688,+ | |||
|id=chr6:48627672..48627688,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.67e-20!9;CL:0000789!2.67e-20!9;CL:0002420!2.67e-20!9;CL:0002419!2.67e-20!9;CL:0000790!2.67e-20!9;CL:0000084!1.96e-19!11;CL:0000827!1.96e-19!11;CL:0000624!1.44e-18!8;CL:0000838!1.29e-17!12;CL:0000542!4.45e-16!13;CL:0000051!4.45e-16!13;CL:0000893!3.16e-14!6;CL:0002489!3.16e-14!6;CL:0000898!3.16e-14!6;CL:0000809!3.16e-14!6;CL:0000810!3.16e-14!6;CL:0000895!3.16e-14!6;CL:0000808!3.16e-14!6;CL:0000894!3.16e-14!6;CL:0000806!3.16e-14!6;CL:0000807!3.16e-14!6;CL:0000805!3.16e-14!6;CL:0002425!3.16e-14!6;CL:0002436!3.16e-14!6;CL:0002427!3.16e-14!6;CL:0002428!3.16e-14!6;CL:0002429!3.16e-14!6;CL:0002433!3.16e-14!6;CL:0002431!3.16e-14!6;CL:0002432!3.16e-14!6;CL:0000738!9.59e-12!17;CL:0002087!9.59e-12!17;CL:0002031!1.42e-10!25;CL:0000988!6.52e-09!32;CL:0002032!6.52e-09!32;CL:0000037!6.52e-09!32;CL:0000566!6.52e-09!32;CL:0000837!6.52e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.02e-77,8;CL:0000791,7.69e-69,9;CL:0000789,7.69e-69,9;CL:0002420,7.69e-69,9;CL:0002419,7.69e-69,9;CL:0000790,7.69e-69,9;CL:0000893,6.65e-58,6;CL:0002489,6.65e-58,6;CL:0000898,6.65e-58,6;CL:0000809,6.65e-58,6;CL:0000810,6.65e-58,6;CL:0000895,6.65e-58,6;CL:0000808,6.65e-58,6;CL:0000894,6.65e-58,6;CL:0000806,6.65e-58,6;CL:0000807,6.65e-58,6;CL:0000805,6.65e-58,6;CL:0002425,6.65e-58,6;CL:0002436,6.65e-58,6;CL:0002427,6.65e-58,6;CL:0002428,6.65e-58,6;CL:0002429,6.65e-58,6;CL:0002433,6.65e-58,6;CL:0002431,6.65e-58,6;CL:0002432,6.65e-58,6;CL:0000084,2.37e-56,11;CL:0000827,2.37e-56,11;CL:0000838,1.15e-51,12;CL:0000542,1.06e-47,13;CL:0000051,1.06e-47,13;CL:0000738,1.72e-36,17;CL:0002087,1.72e-36,17;CL:0002031,8.28e-25,25;CL:0000988,2.32e-19,32;CL:0002032,2.32e-19,32;CL:0000037,2.32e-19,32;CL:0000837,2.32e-19,32;CL:0002320,2.04e-13,46;CL:0000134,2.04e-13,46;CL:0000219,2.15e-11,54;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.37e-34!23;UBERON:0000974!7.37e-34!23;UBERON:0004807!7.37e-34!23;UBERON:0005058!7.37e-34!23;UBERON:0003351!7.37e-34!23;UBERON:0009113!7.37e-34!23;UBERON:0003295!7.37e-34!23;UBERON:0009722!7.37e-34!23;UBERON:0005562!7.37e-34!23;UBERON:0007690!7.37e-34!23;UBERON:0006562!3.19e-32!24;UBERON:0003408!3.19e-32!24;UBERON:0001557!3.19e-32!24;UBERON:0001042!3.19e-32!24;UBERON:0008814!3.19e-32!24;UBERON:0009145!3.19e-32!24;UBERON:0004177!2.35e-31!29;UBERON:0000072!4.81e-28!27;UBERON:0002193!1.79e-22!48;UBERON:0002390!3.78e-22!45;UBERON:0003061!3.78e-22!45;UBERON:0000063!2.06e-20!35;UBERON:0000065!1.69e-18!41;UBERON:0001004!6.30e-18!42;UBERON:0005057!5.18e-17!51;UBERON:0002405!9.39e-15!70;UBERON:0003929!7.25e-14!55;UBERON:0002368!2.12e-13!60;UBERON:0002530!6.36e-12!65;UBERON:0005911!4.86e-11!69;UBERON:0000490!1.26e-10!66;UBERON:0003081!2.51e-10!88;UBERON:0000949!3.29e-10!72;UBERON:0001041!1.39e-08!92;UBERON:0000077!7.84e-08!97;UBERON:0007811!1.24e-07!86;UBERON:0000064!1.52e-07!99;UBERON:0000153!2.21e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.87e-20,23;UBERON:0000974,1.87e-20,23;UBERON:0004807,1.87e-20,23;UBERON:0005058,1.87e-20,23;UBERON:0003351,1.87e-20,23;UBERON:0009113,1.87e-20,23;UBERON:0003295,1.87e-20,23;UBERON:0009722,1.87e-20,23;UBERON:0005562,1.87e-20,23;UBERON:0007690,1.87e-20,23;UBERON:0006562,1.33e-19,24;UBERON:0003408,1.33e-19,24;UBERON:0001557,1.33e-19,24;UBERON:0001042,1.33e-19,24;UBERON:0008814,1.33e-19,24;UBERON:0009145,1.33e-19,24;UBERON:0000072,2.03e-17,27;UBERON:0004177,3.27e-16,29;UBERON:0005057,3.27e-16,29;UBERON:0002384,2.04e-13,46;UBERON:0000077,2.04e-13,35;UBERON:0007811,4.86e-13,36;UBERON:0000065,1.97e-11,41;UBERON:0001004,3.72e-11,42;UBERON:0000153,6.83e-11,43;UBERON:0002390,2.12e-10,45;UBERON:0003061,2.12e-10,45;UBERON:0002193,9.74e-10,48;UBERON:0002405,9.74e-10,48;UBERON:0003929,1.80e-08,55;UBERON:0002368,9.62e-08,60;UBERON:0002530,3.98e-07,65;UBERON:0000490,5.16e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.93684985162364,1.40788722151667,1.40438715793196,1.71217968225505,1.7549874978974,1.54080656938085,2.97229368224591,0,0,0,0.630924330716475,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.27338845544205,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.721172697119813,0.886137163047463,1.00966449948148,0.15241361331,0.705783295957884,0.487289403698762,0.577271049841977,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:48627672..48627688,+ | |||
}} |
Revision as of 10:07, 14 September 2013
Short description: | p@chr6:48627672..48627688, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48627672..48627688, + |
Coexpression cluster: | MCL_coexpression_mm9:291 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.87e-20 | 23 |
neck | 1.87e-20 | 23 |
respiratory system epithelium | 1.87e-20 | 23 |
hemolymphoid system gland | 1.87e-20 | 23 |
pharyngeal epithelium | 1.87e-20 | 23 |
thymic region | 1.87e-20 | 23 |
pharyngeal gland | 1.87e-20 | 23 |
entire pharyngeal arch endoderm | 1.87e-20 | 23 |
thymus primordium | 1.87e-20 | 23 |
early pharyngeal endoderm | 1.87e-20 | 23 |
pharynx | 1.33e-19 | 24 |
gland of gut | 1.33e-19 | 24 |
upper respiratory tract | 1.33e-19 | 24 |
chordate pharynx | 1.33e-19 | 24 |
pharyngeal arch system | 1.33e-19 | 24 |
pharyngeal region of foregut | 1.33e-19 | 24 |
segment of respiratory tract | 2.03e-17 | 27 |
hemopoietic organ | 3.27e-16 | 29 |
immune organ | 3.27e-16 | 29 |
connective tissue | 2.04e-13 | 46 |
mixed endoderm/mesoderm-derived structure | 2.04e-13 | 35 |
craniocervical region | 4.86e-13 | 36 |
respiratory tract | 1.97e-11 | 41 |
respiratory system | 3.72e-11 | 42 |
anterior region of body | 6.83e-11 | 43 |
hematopoietic system | 2.12e-10 | 45 |
blood island | 2.12e-10 | 45 |
hemolymphoid system | 9.74e-10 | 48 |
immune system | 9.74e-10 | 48 |
gut epithelium | 1.80e-08 | 55 |
endocrine gland | 9.62e-08 | 60 |
gland | 3.98e-07 | 65 |
unilaminar epithelium | 5.16e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.