FFCP PHASE1:Mm9::chr11:100002128..100002131,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:100002128..100002131,+|id=chr11:100002128..100002131,+|ontology_enrichment_celltype=CL:0002076!1.03e-18!15;CL:0000068!3.29e-15!3;CL:0002202!3.29e-15!3;CL:0000069!3.29e-15!3;CL:0002632!3.29e-15!3;CL:0002368!3.29e-15!3;CL:0000307!3.29e-15!3;CL:0000377!3.29e-15!3;CL:0002250!3.65e-14!3;CL:0000223!8.80e-14!20;CL:0000066!9.96e-14!25;CL:0002563!2.44e-12!9;CL:0002251!2.44e-12!9|ontology_enrichment_celltype_v019_2=CL:0000068,1.33e-65,3;CL:0002202,1.33e-65,3;CL:0000069,1.33e-65,3;CL:0002632,1.33e-65,3;CL:0002368,1.33e-65,3;CL:0000307,1.33e-65,3;CL:0000377,1.33e-65,3;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.66e-23!15;UBERON:0001242!4.03e-21!13;UBERON:0000060!4.03e-21!13;UBERON:0001262!4.03e-21!13;UBERON:0004786!4.03e-21!13;UBERON:0004923!3.08e-17!24;UBERON:0003126!3.29e-15!3;UBERON:0001005!3.29e-15!3;UBERON:0007196!3.29e-15!3;UBERON:0001558!3.29e-15!3;UBERON:0000331!3.65e-14!3;UBERON:0002116!3.65e-14!3;UBERON:0001204!3.65e-14!3;UBERON:0001168!3.65e-14!3;UBERON:0003350!2.44e-12!9;UBERON:0004808!2.44e-12!9;UBERON:0001277!2.44e-12!9;UBERON:0000485!4.56e-10!11;UBERON:0005409!6.68e-09!59;UBERON:0004119!2.30e-07!130;UBERON:0000925!2.30e-07!130;UBERON:0006595!2.30e-07!130;UBERON:0000160!3.69e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.33e-65,3;UBERON:0001005,1.33e-65,3;UBERON:0007196,1.33e-65,3;UBERON:0001558,1.33e-65,3;UBERON:0005178,1.84e-12,17;UBERON:0005181,1.84e-12,17;UBERON:0002224,1.84e-12,17;UBERON:0000915,1.84e-12,17;UBERON:0008947,1.84e-12,17;UBERON:0003258,1.84e-12,17;UBERON:0000331,1.88e-08,3;UBERON:0002116,1.88e-08,3;UBERON:0001204,1.88e-08,3;UBERON:0001168,1.88e-08,3;UBERON:0000072,3.59e-08,27|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0.57423196411502,0,0,0.190023419456374,1.26015064879965,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,5.19578498426914,3.29367825117628,6.0662933401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:100002128..100002131,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:100002128..100002131,+ | |||
|id=chr11:100002128..100002131,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.03e-18!15;CL:0000068!3.29e-15!3;CL:0002202!3.29e-15!3;CL:0000069!3.29e-15!3;CL:0002632!3.29e-15!3;CL:0002368!3.29e-15!3;CL:0000307!3.29e-15!3;CL:0000377!3.29e-15!3;CL:0002250!3.65e-14!3;CL:0000223!8.80e-14!20;CL:0000066!9.96e-14!25;CL:0002563!2.44e-12!9;CL:0002251!2.44e-12!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.33e-65,3;CL:0002202,1.33e-65,3;CL:0000069,1.33e-65,3;CL:0002632,1.33e-65,3;CL:0002368,1.33e-65,3;CL:0000307,1.33e-65,3;CL:0000377,1.33e-65,3;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.66e-23!15;UBERON:0001242!4.03e-21!13;UBERON:0000060!4.03e-21!13;UBERON:0001262!4.03e-21!13;UBERON:0004786!4.03e-21!13;UBERON:0004923!3.08e-17!24;UBERON:0003126!3.29e-15!3;UBERON:0001005!3.29e-15!3;UBERON:0007196!3.29e-15!3;UBERON:0001558!3.29e-15!3;UBERON:0000331!3.65e-14!3;UBERON:0002116!3.65e-14!3;UBERON:0001204!3.65e-14!3;UBERON:0001168!3.65e-14!3;UBERON:0003350!2.44e-12!9;UBERON:0004808!2.44e-12!9;UBERON:0001277!2.44e-12!9;UBERON:0000485!4.56e-10!11;UBERON:0005409!6.68e-09!59;UBERON:0004119!2.30e-07!130;UBERON:0000925!2.30e-07!130;UBERON:0006595!2.30e-07!130;UBERON:0000160!3.69e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.33e-65,3;UBERON:0001005,1.33e-65,3;UBERON:0007196,1.33e-65,3;UBERON:0001558,1.33e-65,3;UBERON:0005178,1.84e-12,17;UBERON:0005181,1.84e-12,17;UBERON:0002224,1.84e-12,17;UBERON:0000915,1.84e-12,17;UBERON:0008947,1.84e-12,17;UBERON:0003258,1.84e-12,17;UBERON:0000331,1.88e-08,3;UBERON:0002116,1.88e-08,3;UBERON:0001204,1.88e-08,3;UBERON:0001168,1.88e-08,3;UBERON:0000072,3.59e-08,27 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0.57423196411502,0,0,0.190023419456374,1.26015064879965,0.443461021310609,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,5.19578498426914,3.29367825117628,6.0662933401774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:100002128..100002131,+ | |||
}} |
Revision as of 18:08, 12 September 2013
Short description: | p@chr11:100002128..100002131, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:100002128..100002131, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.33e-65 | 3 |
epithelial cell of tracheobronchial tree | 1.33e-65 | 3 |
branched duct epithelial cell | 1.33e-65 | 3 |
epithelial cell of lower respiratory tract | 1.33e-65 | 3 |
respiratory epithelial cell | 1.33e-65 | 3 |
tracheal epithelial cell | 1.33e-65 | 3 |
tracheoblast | 1.33e-65 | 3 |
endo-epithelial cell | 5.35e-14 | 15 |
endodermal cell | 9.91e-11 | 20 |
epithelial cell | 9.29e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.33e-65 | 3 |
respiratory airway | 1.33e-65 | 3 |
tracheobronchial tree | 1.33e-65 | 3 |
lower respiratory tract | 1.33e-65 | 3 |
thoracic cavity element | 1.84e-12 | 17 |
thoracic segment organ | 1.84e-12 | 17 |
thoracic cavity | 1.84e-12 | 17 |
thoracic segment of trunk | 1.84e-12 | 17 |
respiratory primordium | 1.84e-12 | 17 |
endoderm of foregut | 1.84e-12 | 17 |
ileal mucosa | 1.88e-08 | 3 |
ileum | 1.88e-08 | 3 |
mucosa of small intestine | 1.88e-08 | 3 |
wall of small intestine | 1.88e-08 | 3 |
segment of respiratory tract | 3.59e-08 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.