FFCP PHASE1:Mm9::chr8:56040554..56040565,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=234267|HGNC=|MCL_coexpression_id=1|UniProt=P35802,Q542P2|association_with_transcript=473bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end|description=CAGE_peak_12_at_Gpm6a_5end|id=chr8:56040554..56040565,+|ontology_enrichment_celltype=CL:0000117!1.34e-15!23;CL:0000337!1.34e-15!23;CL:0000540!1.76e-10!33;CL:0000047!1.76e-10!33;CL:0000031!1.76e-10!33;CL:0000404!1.76e-10!33;CL:0000393!8.80e-08!39;CL:0000211!8.80e-08!39;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44;CL:0002319!4.44e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.49e-17,23;CL:0000337,3.49e-17,23;CL:0000540,1.16e-10,33;CL:0000047,1.16e-10,33;CL:0000031,1.16e-10,33;CL:0000404,1.16e-10,33;CL:0000393,2.17e-08,39;CL:0000211,2.17e-08,39;CL:0002319,3.07e-07,43;CL:0000221,5.49e-07,44;CL:0000133,5.49e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.64e-32!63;UBERON:0002346!1.04e-28!71;UBERON:0003075!1.04e-28!71;UBERON:0007284!1.04e-28!71;UBERON:0001049!3.74e-28!52;UBERON:0005068!3.74e-28!52;UBERON:0006241!3.74e-28!52;UBERON:0007135!3.74e-28!52;UBERON:0003056!1.98e-27!49;UBERON:0000955!4.49e-27!50;UBERON:0006238!4.49e-27!50;UBERON:0001017!1.52e-26!73;UBERON:0005743!1.52e-26!73;UBERON:0002616!3.66e-26!49;UBERON:0000073!2.38e-25!75;UBERON:0001016!2.38e-25!75;UBERON:0002020!9.94e-25!34;UBERON:0004121!1.07e-23!102;UBERON:0000924!1.07e-23!102;UBERON:0006601!1.07e-23!102;UBERON:0003080!8.28e-21!40;UBERON:0002791!1.07e-20!29;UBERON:0003528!1.07e-20!29;UBERON:0001893!1.07e-20!29;UBERON:0002780!7.90e-20!39;UBERON:0001890!7.90e-20!39;UBERON:0006240!7.90e-20!39;UBERON:0007811!2.11e-19!86;UBERON:0000153!2.78e-16!94;UBERON:0000956!8.23e-14!21;UBERON:0001869!8.23e-14!21;UBERON:0000203!8.23e-14!21;UBERON:0002021!1.18e-11!10;UBERON:0000411!1.18e-11!10;UBERON:0001950!1.18e-11!10;UBERON:0002619!6.99e-11!17;UBERON:0002420!3.64e-08!8;UBERON:0007245!3.64e-08!8;UBERON:0010009!3.64e-08!8;UBERON:0010011!3.64e-08!8;UBERON:0000454!3.64e-08!8;UBERON:0003076!8.83e-08!12;UBERON:0003057!8.83e-08!12;UBERON:0000970!2.18e-07!9;UBERON:0000019!2.18e-07!9;UBERON:0000047!2.18e-07!9;UBERON:0004088!2.18e-07!9;UBERON:0002104!2.18e-07!9;UBERON:0001456!2.18e-07!9;UBERON:0003072!2.18e-07!9;UBERON:0003071!2.18e-07!9;UBERON:0004128!2.18e-07!9;UBERON:0002298!3.25e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-40,54;UBERON:0002346,5.46e-40,64;UBERON:0003075,5.46e-40,64;UBERON:0007284,5.46e-40,64;UBERON:0001049,5.74e-37,52;UBERON:0005068,5.74e-37,52;UBERON:0006241,5.74e-37,52;UBERON:0007135,5.74e-37,52;UBERON:0001017,1.67e-34,73;UBERON:0010371,9.50e-34,73;UBERON:0004121,2.59e-33,95;UBERON:0000924,2.59e-33,95;UBERON:0006601,2.59e-33,95;UBERON:0001016,2.68e-33,75;UBERON:0000955,2.79e-32,47;UBERON:0006238,2.79e-32,47;UBERON:0002020,7.76e-32,34;UBERON:0003056,1.40e-31,49;UBERON:0002616,6.88e-31,46;UBERON:0003528,1.95e-27,29;UBERON:0002791,1.95e-27,29;UBERON:0001893,1.95e-27,29;UBERON:0003080,1.71e-26,40;UBERON:0002780,5.51e-25,39;UBERON:0001890,5.51e-25,39;UBERON:0006240,5.51e-25,39;UBERON:0010314,1.38e-24,92;UBERON:0002021,3.08e-18,10;UBERON:0000411,3.08e-18,10;UBERON:0001950,3.08e-18,10;UBERON:0000956,1.53e-16,21;UBERON:0001869,1.53e-16,21;UBERON:0000203,1.53e-16,21;UBERON:0002619,8.99e-14,17;UBERON:0002420,1.78e-12,8;UBERON:0007245,1.78e-12,8;UBERON:0010009,1.78e-12,8;UBERON:0010011,1.78e-12,8;UBERON:0000454,1.78e-12,8;UBERON:0000025,1.06e-11,114;UBERON:0003076,1.56e-10,12;UBERON:0003057,1.56e-10,12;UBERON:0004111,2.47e-10,122;UBERON:0002950,4.39e-08,4;UBERON:0001891,4.39e-08,4;UBERON:0009616,4.39e-08,4;UBERON:0010286,4.39e-08,4;UBERON:0000483,4.41e-08,174;UBERON:0000119,7.11e-08,176;UBERON:0000369,1.20e-07,5;UBERON:0002435,1.20e-07,5;UBERON:0000204,1.20e-07,5;UBERON:0010082,1.20e-07,5;UBERON:0002240,7.93e-07,6;UBERON:0005174,7.93e-07,6;UBERON:0001137,7.93e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0,1.34796496001021,0.675029691658453,1.47227472945967,0.571301968807607,3.3130281142742,0.857435594504678,0.766763768145891,0,8.8092704799511,15.4501679083077,15.0534402591119,1.18697658957174,2.01272815925301,3.12548022334056,7.81712397203867,14.6318278608237,18.9469827243245,7.66034322231536,6.40672563595963,2.23679334990361,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5668478206928,19.2690970268379,0,0,0,0,14.5296920222678,8.6925114535539,1.63350657746724,15.8180131374972,13.5529192385075,15.7918913865266,15.0884374653015,0,0,0,0.420883711772948,0.390361328888111,0.919608417733892,1.62055916824814,2.56198190320716,2.24520447199382,3.07472928683639,3.18585863503078,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5100064509248,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,9.02529986759964,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,6.10510501201433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,13.3494318587081,10.8850147553485,13.4045482228076,13.0165678756422,15.107877947794,23.6257875081132,20.7147753483141,24.0165476761628,15.0150490408028,0.103787347584177,1.19707462020309,0.853668028770671,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.768301828858431,0.516919220600519,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0,0.953744759789284,0.290692833264657,0.376437521661322,0.423073039458382,0,0.263069711437843,0.679020569229309,1.68342681497322,0.355905054372522,0.492522411877817,0.818462086339379,0.77468420592983,0,0.749431733813838,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p12@Gpm6a}} | ||
|EntrezGene=234267 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P35802,Q542P2 | |||
|association_with_transcript=473bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | |||
|description=CAGE_peak_12_at_Gpm6a_5end | |||
|id=chr8:56040554..56040565,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.34e-15!23;CL:0000337!1.34e-15!23;CL:0000540!1.76e-10!33;CL:0000047!1.76e-10!33;CL:0000031!1.76e-10!33;CL:0000404!1.76e-10!33;CL:0000393!8.80e-08!39;CL:0000211!8.80e-08!39;CL:0000221!2.37e-07!44;CL:0000133!2.37e-07!44;CL:0002319!4.44e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.49e-17,23;CL:0000337,3.49e-17,23;CL:0000540,1.16e-10,33;CL:0000047,1.16e-10,33;CL:0000031,1.16e-10,33;CL:0000404,1.16e-10,33;CL:0000393,2.17e-08,39;CL:0000211,2.17e-08,39;CL:0002319,3.07e-07,43;CL:0000221,5.49e-07,44;CL:0000133,5.49e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.64e-32!63;UBERON:0002346!1.04e-28!71;UBERON:0003075!1.04e-28!71;UBERON:0007284!1.04e-28!71;UBERON:0001049!3.74e-28!52;UBERON:0005068!3.74e-28!52;UBERON:0006241!3.74e-28!52;UBERON:0007135!3.74e-28!52;UBERON:0003056!1.98e-27!49;UBERON:0000955!4.49e-27!50;UBERON:0006238!4.49e-27!50;UBERON:0001017!1.52e-26!73;UBERON:0005743!1.52e-26!73;UBERON:0002616!3.66e-26!49;UBERON:0000073!2.38e-25!75;UBERON:0001016!2.38e-25!75;UBERON:0002020!9.94e-25!34;UBERON:0004121!1.07e-23!102;UBERON:0000924!1.07e-23!102;UBERON:0006601!1.07e-23!102;UBERON:0003080!8.28e-21!40;UBERON:0002791!1.07e-20!29;UBERON:0003528!1.07e-20!29;UBERON:0001893!1.07e-20!29;UBERON:0002780!7.90e-20!39;UBERON:0001890!7.90e-20!39;UBERON:0006240!7.90e-20!39;UBERON:0007811!2.11e-19!86;UBERON:0000153!2.78e-16!94;UBERON:0000956!8.23e-14!21;UBERON:0001869!8.23e-14!21;UBERON:0000203!8.23e-14!21;UBERON:0002021!1.18e-11!10;UBERON:0000411!1.18e-11!10;UBERON:0001950!1.18e-11!10;UBERON:0002619!6.99e-11!17;UBERON:0002420!3.64e-08!8;UBERON:0007245!3.64e-08!8;UBERON:0010009!3.64e-08!8;UBERON:0010011!3.64e-08!8;UBERON:0000454!3.64e-08!8;UBERON:0003076!8.83e-08!12;UBERON:0003057!8.83e-08!12;UBERON:0000970!2.18e-07!9;UBERON:0000019!2.18e-07!9;UBERON:0000047!2.18e-07!9;UBERON:0004088!2.18e-07!9;UBERON:0002104!2.18e-07!9;UBERON:0001456!2.18e-07!9;UBERON:0003072!2.18e-07!9;UBERON:0003071!2.18e-07!9;UBERON:0004128!2.18e-07!9;UBERON:0002298!3.25e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-40,54;UBERON:0002346,5.46e-40,64;UBERON:0003075,5.46e-40,64;UBERON:0007284,5.46e-40,64;UBERON:0001049,5.74e-37,52;UBERON:0005068,5.74e-37,52;UBERON:0006241,5.74e-37,52;UBERON:0007135,5.74e-37,52;UBERON:0001017,1.67e-34,73;UBERON:0010371,9.50e-34,73;UBERON:0004121,2.59e-33,95;UBERON:0000924,2.59e-33,95;UBERON:0006601,2.59e-33,95;UBERON:0001016,2.68e-33,75;UBERON:0000955,2.79e-32,47;UBERON:0006238,2.79e-32,47;UBERON:0002020,7.76e-32,34;UBERON:0003056,1.40e-31,49;UBERON:0002616,6.88e-31,46;UBERON:0003528,1.95e-27,29;UBERON:0002791,1.95e-27,29;UBERON:0001893,1.95e-27,29;UBERON:0003080,1.71e-26,40;UBERON:0002780,5.51e-25,39;UBERON:0001890,5.51e-25,39;UBERON:0006240,5.51e-25,39;UBERON:0010314,1.38e-24,92;UBERON:0002021,3.08e-18,10;UBERON:0000411,3.08e-18,10;UBERON:0001950,3.08e-18,10;UBERON:0000956,1.53e-16,21;UBERON:0001869,1.53e-16,21;UBERON:0000203,1.53e-16,21;UBERON:0002619,8.99e-14,17;UBERON:0002420,1.78e-12,8;UBERON:0007245,1.78e-12,8;UBERON:0010009,1.78e-12,8;UBERON:0010011,1.78e-12,8;UBERON:0000454,1.78e-12,8;UBERON:0000025,1.06e-11,114;UBERON:0003076,1.56e-10,12;UBERON:0003057,1.56e-10,12;UBERON:0004111,2.47e-10,122;UBERON:0002950,4.39e-08,4;UBERON:0001891,4.39e-08,4;UBERON:0009616,4.39e-08,4;UBERON:0010286,4.39e-08,4;UBERON:0000483,4.41e-08,174;UBERON:0000119,7.11e-08,176;UBERON:0000369,1.20e-07,5;UBERON:0002435,1.20e-07,5;UBERON:0000204,1.20e-07,5;UBERON:0010082,1.20e-07,5;UBERON:0002240,7.93e-07,6;UBERON:0005174,7.93e-07,6;UBERON:0001137,7.93e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0,1.34796496001021,0.675029691658453,1.47227472945967,0.571301968807607,3.3130281142742,0.857435594504678,0.766763768145891,0,8.8092704799511,15.4501679083077,15.0534402591119,1.18697658957174,2.01272815925301,3.12548022334056,7.81712397203867,14.6318278608237,18.9469827243245,7.66034322231536,6.40672563595963,2.23679334990361,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5668478206928,19.2690970268379,0,0,0,0,14.5296920222678,8.6925114535539,1.63350657746724,15.8180131374972,13.5529192385075,15.7918913865266,15.0884374653015,0,0,0,0.420883711772948,0.390361328888111,0.919608417733892,1.62055916824814,2.56198190320716,2.24520447199382,3.07472928683639,3.18585863503078,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5100064509248,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,9.02529986759964,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,6.10510501201433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,13.3494318587081,10.8850147553485,13.4045482228076,13.0165678756422,15.107877947794,23.6257875081132,20.7147753483141,24.0165476761628,15.0150490408028,0.103787347584177,1.19707462020309,0.853668028770671,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.768301828858431,0.516919220600519,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,1.02860775715625,0,0.953744759789284,0.290692833264657,0.376437521661322,0.423073039458382,0,0.263069711437843,0.679020569229309,1.68342681497322,0.355905054372522,0.492522411877817,0.818462086339379,0.77468420592983,0,0.749431733813838,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p12@Gpm6a | |||
}} |
Revision as of 15:47, 14 September 2013
Short description: | p12@Gpm6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Gpm6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 473bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end |
EntrezGene: | Gpm6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.49e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.49e-17 | 23 |
neuron | 1.16e-10 | 33 |
neuronal stem cell | 1.16e-10 | 33 |
neuroblast | 1.16e-10 | 33 |
electrically signaling cell | 1.16e-10 | 33 |
electrically responsive cell | 2.17e-08 | 39 |
electrically active cell | 2.17e-08 | 39 |
neural cell | 3.07e-07 | 43 |
ectodermal cell | 5.49e-07 | 44 |
neurectodermal cell | 5.49e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.