FFCP PHASE1:Mm9::chr1:175266941..175266951,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=525|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:175266941..175266951,-|id=chr1:175266941..175266951,-|ontology_enrichment_celltype=CL:0000117!4.17e-20!23;CL:0000337!4.17e-20!23;CL:0000540!3.04e-15!33;CL:0000047!3.04e-15!33;CL:0000031!3.04e-15!33;CL:0000404!3.04e-15!33;CL:0000393!1.52e-11!39;CL:0000211!1.52e-11!39;CL:0002319!2.24e-11!43;CL:0000221!6.47e-11!44;CL:0000133!6.47e-11!44;CL:0000055!1.43e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.68e-25,23;CL:0000337,6.68e-25,23;CL:0000540,1.66e-16,33;CL:0000047,1.66e-16,33;CL:0000031,1.66e-16,33;CL:0000404,1.66e-16,33;CL:0000393,1.55e-13,39;CL:0000211,1.55e-13,39;CL:0002319,5.14e-12,43;CL:0000221,1.12e-11,44;CL:0000133,1.12e-11,44;CL:0002614,3.87e-11,3;CL:0002612,1.29e-10,3;CL:0002613,3.90e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.07e-28!71;UBERON:0003075!1.07e-28!71;UBERON:0007284!1.07e-28!71;UBERON:0001017!3.07e-26!73;UBERON:0005743!3.07e-26!73;UBERON:0001049!6.58e-26!52;UBERON:0005068!6.58e-26!52;UBERON:0006241!6.58e-26!52;UBERON:0007135!6.58e-26!52;UBERON:0000073!4.65e-25!75;UBERON:0001016!4.65e-25!75;UBERON:0002020!8.61e-25!34;UBERON:0004121!6.22e-24!102;UBERON:0000924!6.22e-24!102;UBERON:0006601!6.22e-24!102;UBERON:0000033!5.91e-23!63;UBERON:0000955!2.07e-22!50;UBERON:0006238!2.07e-22!50;UBERON:0002616!1.31e-21!49;UBERON:0003056!2.12e-20!49;UBERON:0002791!6.78e-20!29;UBERON:0003528!6.78e-20!29;UBERON:0001893!6.78e-20!29;UBERON:0002780!3.82e-18!39;UBERON:0001890!3.82e-18!39;UBERON:0006240!3.82e-18!39;UBERON:0003080!2.03e-17!40;UBERON:0000956!7.55e-14!21;UBERON:0001869!7.55e-14!21;UBERON:0000203!7.55e-14!21;UBERON:0007811!9.06e-13!86;UBERON:0002021!1.03e-11!10;UBERON:0000411!1.03e-11!10;UBERON:0001950!1.03e-11!10;UBERON:0000153!3.23e-11!94;UBERON:0002619!1.31e-10!17;UBERON:0003076!3.11e-09!12;UBERON:0003057!3.11e-09!12;UBERON:0002420!2.92e-07!8;UBERON:0007245!2.92e-07!8;UBERON:0010009!2.92e-07!8;UBERON:0010011!2.92e-07!8;UBERON:0000454!2.92e-07!8;UBERON:0002240!7.43e-07!6;UBERON:0005174!7.43e-07!6;UBERON:0001137!7.43e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.57e-42,34;UBERON:0000073,1.99e-33,54;UBERON:0003528,6.61e-33,29;UBERON:0002791,6.61e-33,29;UBERON:0001893,6.61e-33,29;UBERON:0002021,2.92e-31,10;UBERON:0000411,2.92e-31,10;UBERON:0001950,2.92e-31,10;UBERON:0001049,4.65e-29,52;UBERON:0005068,4.65e-29,52;UBERON:0006241,4.65e-29,52;UBERON:0007135,4.65e-29,52;UBERON:0001017,9.81e-26,73;UBERON:0001016,6.32e-25,75;UBERON:0002780,1.54e-23,39;UBERON:0001890,1.54e-23,39;UBERON:0006240,1.54e-23,39;UBERON:0003080,7.37e-23,40;UBERON:0002346,8.61e-23,64;UBERON:0003075,8.61e-23,64;UBERON:0007284,8.61e-23,64;UBERON:0002616,5.70e-22,46;UBERON:0000955,2.02e-21,47;UBERON:0006238,2.02e-21,47;UBERON:0010371,1.94e-19,73;UBERON:0002420,3.10e-19,8;UBERON:0007245,3.10e-19,8;UBERON:0010009,3.10e-19,8;UBERON:0010011,3.10e-19,8;UBERON:0000454,3.10e-19,8;UBERON:0004121,1.06e-18,95;UBERON:0000924,1.06e-18,95;UBERON:0006601,1.06e-18,95;UBERON:0003056,5.47e-18,49;UBERON:0002619,1.18e-17,17;UBERON:0000956,8.88e-17,21;UBERON:0001869,8.88e-17,21;UBERON:0000203,8.88e-17,21;UBERON:0010314,1.67e-14,92;UBERON:0000025,4.77e-12,114;UBERON:0002038,3.87e-11,3;UBERON:0009663,3.87e-11,3;UBERON:0009661,3.87e-11,3;UBERON:0000125,3.87e-11,3;UBERON:0002308,3.87e-11,3;UBERON:0004111,5.93e-11,122;UBERON:0002257,1.29e-10,3;UBERON:0001948,1.30e-10,5;UBERON:0002315,1.30e-10,5;UBERON:0000369,4.07e-10,5;UBERON:0002435,4.07e-10,5;UBERON:0000204,4.07e-10,5;UBERON:0010082,4.07e-10,5;UBERON:0002240,7.42e-09,6;UBERON:0005174,7.42e-09,6;UBERON:0001137,7.42e-09,6;UBERON:0002950,1.88e-08,4;UBERON:0001891,1.88e-08,4;UBERON:0009616,1.88e-08,4;UBERON:0010286,1.88e-08,4;UBERON:0011216,1.65e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,1.35005938331691,0.630974884054146,1.42825492201902,0.441737081903227,0.734944795289724,0.191690942036473,0.919218786610021,0,2.042997409363,1.53606533256243,1.31886287730194,2.01272815925301,2.08365348222704,2.51264699101243,2.8138130501584,3.36156145108982,3.24091444021034,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,2.93225389538837,0,0,0,0,0,0,1.00523481690292,0.869121600961382,1.79000820131231,0.62336413367868,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0,0,0.360124259610698,0.150704817835715,0.136072998302656,0.896796041993948,0.655912071918102,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=525 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:175266941..175266951,- | |||
|id=chr1:175266941..175266951,- | |||
|ontology_enrichment_celltype=CL:0000117!4.17e-20!23;CL:0000337!4.17e-20!23;CL:0000540!3.04e-15!33;CL:0000047!3.04e-15!33;CL:0000031!3.04e-15!33;CL:0000404!3.04e-15!33;CL:0000393!1.52e-11!39;CL:0000211!1.52e-11!39;CL:0002319!2.24e-11!43;CL:0000221!6.47e-11!44;CL:0000133!6.47e-11!44;CL:0000055!1.43e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.68e-25,23;CL:0000337,6.68e-25,23;CL:0000540,1.66e-16,33;CL:0000047,1.66e-16,33;CL:0000031,1.66e-16,33;CL:0000404,1.66e-16,33;CL:0000393,1.55e-13,39;CL:0000211,1.55e-13,39;CL:0002319,5.14e-12,43;CL:0000221,1.12e-11,44;CL:0000133,1.12e-11,44;CL:0002614,3.87e-11,3;CL:0002612,1.29e-10,3;CL:0002613,3.90e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.07e-28!71;UBERON:0003075!1.07e-28!71;UBERON:0007284!1.07e-28!71;UBERON:0001017!3.07e-26!73;UBERON:0005743!3.07e-26!73;UBERON:0001049!6.58e-26!52;UBERON:0005068!6.58e-26!52;UBERON:0006241!6.58e-26!52;UBERON:0007135!6.58e-26!52;UBERON:0000073!4.65e-25!75;UBERON:0001016!4.65e-25!75;UBERON:0002020!8.61e-25!34;UBERON:0004121!6.22e-24!102;UBERON:0000924!6.22e-24!102;UBERON:0006601!6.22e-24!102;UBERON:0000033!5.91e-23!63;UBERON:0000955!2.07e-22!50;UBERON:0006238!2.07e-22!50;UBERON:0002616!1.31e-21!49;UBERON:0003056!2.12e-20!49;UBERON:0002791!6.78e-20!29;UBERON:0003528!6.78e-20!29;UBERON:0001893!6.78e-20!29;UBERON:0002780!3.82e-18!39;UBERON:0001890!3.82e-18!39;UBERON:0006240!3.82e-18!39;UBERON:0003080!2.03e-17!40;UBERON:0000956!7.55e-14!21;UBERON:0001869!7.55e-14!21;UBERON:0000203!7.55e-14!21;UBERON:0007811!9.06e-13!86;UBERON:0002021!1.03e-11!10;UBERON:0000411!1.03e-11!10;UBERON:0001950!1.03e-11!10;UBERON:0000153!3.23e-11!94;UBERON:0002619!1.31e-10!17;UBERON:0003076!3.11e-09!12;UBERON:0003057!3.11e-09!12;UBERON:0002420!2.92e-07!8;UBERON:0007245!2.92e-07!8;UBERON:0010009!2.92e-07!8;UBERON:0010011!2.92e-07!8;UBERON:0000454!2.92e-07!8;UBERON:0002240!7.43e-07!6;UBERON:0005174!7.43e-07!6;UBERON:0001137!7.43e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.57e-42,34;UBERON:0000073,1.99e-33,54;UBERON:0003528,6.61e-33,29;UBERON:0002791,6.61e-33,29;UBERON:0001893,6.61e-33,29;UBERON:0002021,2.92e-31,10;UBERON:0000411,2.92e-31,10;UBERON:0001950,2.92e-31,10;UBERON:0001049,4.65e-29,52;UBERON:0005068,4.65e-29,52;UBERON:0006241,4.65e-29,52;UBERON:0007135,4.65e-29,52;UBERON:0001017,9.81e-26,73;UBERON:0001016,6.32e-25,75;UBERON:0002780,1.54e-23,39;UBERON:0001890,1.54e-23,39;UBERON:0006240,1.54e-23,39;UBERON:0003080,7.37e-23,40;UBERON:0002346,8.61e-23,64;UBERON:0003075,8.61e-23,64;UBERON:0007284,8.61e-23,64;UBERON:0002616,5.70e-22,46;UBERON:0000955,2.02e-21,47;UBERON:0006238,2.02e-21,47;UBERON:0010371,1.94e-19,73;UBERON:0002420,3.10e-19,8;UBERON:0007245,3.10e-19,8;UBERON:0010009,3.10e-19,8;UBERON:0010011,3.10e-19,8;UBERON:0000454,3.10e-19,8;UBERON:0004121,1.06e-18,95;UBERON:0000924,1.06e-18,95;UBERON:0006601,1.06e-18,95;UBERON:0003056,5.47e-18,49;UBERON:0002619,1.18e-17,17;UBERON:0000956,8.88e-17,21;UBERON:0001869,8.88e-17,21;UBERON:0000203,8.88e-17,21;UBERON:0010314,1.67e-14,92;UBERON:0000025,4.77e-12,114;UBERON:0002038,3.87e-11,3;UBERON:0009663,3.87e-11,3;UBERON:0009661,3.87e-11,3;UBERON:0000125,3.87e-11,3;UBERON:0002308,3.87e-11,3;UBERON:0004111,5.93e-11,122;UBERON:0002257,1.29e-10,3;UBERON:0001948,1.30e-10,5;UBERON:0002315,1.30e-10,5;UBERON:0000369,4.07e-10,5;UBERON:0002435,4.07e-10,5;UBERON:0000204,4.07e-10,5;UBERON:0010082,4.07e-10,5;UBERON:0002240,7.42e-09,6;UBERON:0005174,7.42e-09,6;UBERON:0001137,7.42e-09,6;UBERON:0002950,1.88e-08,4;UBERON:0001891,1.88e-08,4;UBERON:0009616,1.88e-08,4;UBERON:0010286,1.88e-08,4;UBERON:0011216,1.65e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,1.35005938331691,0.630974884054146,1.42825492201902,0.441737081903227,0.734944795289724,0.191690942036473,0.919218786610021,0,2.042997409363,1.53606533256243,1.31886287730194,2.01272815925301,2.08365348222704,2.51264699101243,2.8138130501584,3.36156145108982,3.24091444021034,1.85083185038834,1.67759501242771,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,2.93225389538837,0,0,0,0,0,0,1.00523481690292,0.869121600961382,1.79000820131231,0.62336413367868,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0,0,0.360124259610698,0.150704817835715,0.136072998302656,0.896796041993948,0.655912071918102,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.120625849856312,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,2.86447756719698,3.09335728218638,2.05524755931193,3.0215755895588,1.35004500046361,4.5032120322422,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.953744759789284,0.290692833264657,0.282328141245992,0.25384382367503,0.365855945745545,0,0.407412341537585,0.561142271657738,0.474540072496697,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr1:175266941..175266951,- | |||
}} |
Revision as of 19:48, 13 September 2013
Short description: | p@chr1:175266941..175266951, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:175266941..175266951, - |
Coexpression cluster: | MCL_coexpression_mm9:525 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.68e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.68e-25 | 23 |
neuron | 1.66e-16 | 33 |
neuronal stem cell | 1.66e-16 | 33 |
neuroblast | 1.66e-16 | 33 |
electrically signaling cell | 1.66e-16 | 33 |
electrically responsive cell | 1.55e-13 | 39 |
electrically active cell | 1.55e-13 | 39 |
neural cell | 5.14e-12 | 43 |
ectodermal cell | 1.12e-11 | 44 |
neurectodermal cell | 1.12e-11 | 44 |
neuron of the substantia nigra | 3.87e-11 | 3 |
neuron of the ventral spinal cord | 1.29e-10 | 3 |
striatum neuron | 3.90e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.