FFCP PHASE1:Mm9::chr13:37918684..37918701,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68750|HGNC=|UniProt=Q3UH06|association_with_transcript=-79bp_to_NM_001177868,NR_033615,uc007qcx.2,uc007qcy.2_5end|description=CAGE_peak_12_at_Rreb1_5end|id=chr13:37918684..37918701,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.07e-13!43;UBERON:0009854!4.57e-12!23;UBERON:0009856!4.57e-12!23;UBERON:0002107!2.52e-11!22;UBERON:0007499!2.52e-11!22;UBERON:0006925!2.52e-11!22;UBERON:0009497!2.52e-11!22;UBERON:0000015!2.52e-11!22;UBERON:0002423!2.52e-11!22;UBERON:0006235!2.52e-11!22;UBERON:0008835!2.52e-11!22;UBERON:0003894!2.52e-11!22;UBERON:0004161!2.52e-11!22;UBERON:0008836!2.52e-11!22;UBERON:0004119!2.20e-10!130;UBERON:0000925!2.20e-10!130;UBERON:0006595!2.20e-10!130;UBERON:0005172!2.67e-10!49;UBERON:0005173!2.67e-10!49;UBERON:0002417!2.67e-10!49;UBERON:0000916!2.67e-10!49;UBERON:0001007!3.94e-10!128;UBERON:0001555!3.94e-10!128;UBERON:0007026!3.94e-10!128;UBERON:0005409!8.77e-10!59;UBERON:0004921!1.24e-09!126;UBERON:0004185!1.24e-09!126;UBERON:0002365!2.62e-09!25;UBERON:0002330!2.62e-09!25;UBERON:0009569!2.97e-09!66;UBERON:0003914!4.59e-08!47;UBERON:0005177!8.61e-08!85;UBERON:0000344!1.92e-07!15;UBERON:0002113!4.31e-07!14;UBERON:0003918!4.31e-07!14;UBERON:0005095!4.31e-07!14;UBERON:0007687!4.31e-07!14;UBERON:0001242!4.96e-07!13;UBERON:0000060!4.96e-07!13;UBERON:0001262!4.96e-07!13;UBERON:0004786!4.96e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.88e-18,23;UBERON:0009856,6.88e-18,23;UBERON:0000160,1.23e-16,31;UBERON:0002107,1.47e-16,22;UBERON:0007499,1.47e-16,22;UBERON:0006925,1.47e-16,22;UBERON:0009497,1.47e-16,22;UBERON:0000015,1.47e-16,22;UBERON:0002423,1.47e-16,22;UBERON:0006235,1.47e-16,22;UBERON:0008835,1.47e-16,22;UBERON:0003894,1.47e-16,22;UBERON:0004161,1.47e-16,22;UBERON:0008836,1.47e-16,22;UBERON:0005172,1.02e-14,49;UBERON:0005173,1.02e-14,49;UBERON:0002417,1.02e-14,49;UBERON:0000916,1.02e-14,49;UBERON:0002365,6.79e-14,25;UBERON:0002330,6.79e-14,25;UBERON:0003104,3.44e-10,61;UBERON:0009142,3.44e-10,61;UBERON:0004921,9.39e-10,114;UBERON:0005409,1.07e-09,47;UBERON:0005177,1.25e-09,79;UBERON:0001007,2.17e-09,116;UBERON:0001555,2.17e-09,116;UBERON:0007026,2.17e-09,116;UBERON:0004119,4.87e-09,118;UBERON:0000925,4.87e-09,118;UBERON:0006595,4.87e-09,118;UBERON:0009569,8.06e-09,66;UBERON:0002113,1.00e-07,14;UBERON:0003918,1.00e-07,14;UBERON:0011143,1.00e-07,14;UBERON:0005095,1.00e-07,14;UBERON:0007687,1.00e-07,14;UBERON:0002100,2.26e-07,90;UBERON:0003929,3.33e-07,55|phase1_expression=0,2.09385244583617,1.36499771816861,3.62957053568196,3.00537437967808,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.10556277196391,0.297872853602656,0,0.799962113967033,0.68822784320151,1.72269589234506,0.430761996159075,1.29282739611533,1.71021077510736,1.51218077855958,1.55211357458713,0,0,0,0.577703239502549,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.638436690425939,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0.0755715601067855,1.15945795480671,1.72084775396277,0.679971333707751,4.31762553310254,7.14754059192436,4.03224198387602,1.54488862144927,0,0,0,0,0,0,0,0.216491041011214,0,0,2.51204535381932,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0,0,4.94389935468748,0.144599356919912,0.884610551949874,0,0.883366073841574,0,5.59175283654366,0.292780797011547,0.83778682725382,1.78819938646014,0,0,0,0.149790639404823,0,0,0,0,1.0389402227978,0.324482526135515,0.611036183101898,0.248813941220186,0.505445516867349,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0,0.590292695242212,0.462801338662135,0.697601834251224,0,0.467061369468678,0.658239399653922,0.656669856316381,0.729619285912702,1.31579988682799,0.439100230582101,0.805238512562231,0,0.102904612379284,3.30418782983798,5.55346189993443,0.213288250535234,0,1.41754207454303,1.21010114774006,3.55804870151792,1.33157938278791,1.42358718463353,2.14108641141214,3.2673577144035,1.39269530428806,2.14460495831032,0.898819408654221,0.432276099749388,1.7922714592893,0.948339504765408,2.05647322697512,4.50830942692322,1.83286195060783,1.93952487167626,1.33258057791605,2.15004226222475,5.31396532726568,2.82597710114475,1.97435462274881,12.4510103376603,0,0.786235980452812,0.449724224769707,1.62288097110802,2.17059443777175,2.03700681425136,2.5892652370573,1.94562272130042,1.37280706594041,5.75072826109418,1.11642284300551,3.12037673114561,4.54641980304801,2.33216637578486,2.41221760681684,0.184753190166605,0.189491411770485,0.488894929326078,0.678980343100753,0.469380496577004,0.335012514883631,0.476087281772027,0.585400943573396,0.472905432318573,0.44292937929755,0.478364305972461,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| ||
|EntrezGene=68750 | |||
|HGNC= | |||
|UniProt=Q3UH06 | |||
|association_with_transcript=-79bp_to_NM_001177868,NR_033615,uc007qcx.2,uc007qcy.2_5end | |||
|description=CAGE_peak_12_at_Rreb1_5end | |||
|id=chr13:37918684..37918701,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.07e-13!43;UBERON:0009854!4.57e-12!23;UBERON:0009856!4.57e-12!23;UBERON:0002107!2.52e-11!22;UBERON:0007499!2.52e-11!22;UBERON:0006925!2.52e-11!22;UBERON:0009497!2.52e-11!22;UBERON:0000015!2.52e-11!22;UBERON:0002423!2.52e-11!22;UBERON:0006235!2.52e-11!22;UBERON:0008835!2.52e-11!22;UBERON:0003894!2.52e-11!22;UBERON:0004161!2.52e-11!22;UBERON:0008836!2.52e-11!22;UBERON:0004119!2.20e-10!130;UBERON:0000925!2.20e-10!130;UBERON:0006595!2.20e-10!130;UBERON:0005172!2.67e-10!49;UBERON:0005173!2.67e-10!49;UBERON:0002417!2.67e-10!49;UBERON:0000916!2.67e-10!49;UBERON:0001007!3.94e-10!128;UBERON:0001555!3.94e-10!128;UBERON:0007026!3.94e-10!128;UBERON:0005409!8.77e-10!59;UBERON:0004921!1.24e-09!126;UBERON:0004185!1.24e-09!126;UBERON:0002365!2.62e-09!25;UBERON:0002330!2.62e-09!25;UBERON:0009569!2.97e-09!66;UBERON:0003914!4.59e-08!47;UBERON:0005177!8.61e-08!85;UBERON:0000344!1.92e-07!15;UBERON:0002113!4.31e-07!14;UBERON:0003918!4.31e-07!14;UBERON:0005095!4.31e-07!14;UBERON:0007687!4.31e-07!14;UBERON:0001242!4.96e-07!13;UBERON:0000060!4.96e-07!13;UBERON:0001262!4.96e-07!13;UBERON:0004786!4.96e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.88e-18,23;UBERON:0009856,6.88e-18,23;UBERON:0000160,1.23e-16,31;UBERON:0002107,1.47e-16,22;UBERON:0007499,1.47e-16,22;UBERON:0006925,1.47e-16,22;UBERON:0009497,1.47e-16,22;UBERON:0000015,1.47e-16,22;UBERON:0002423,1.47e-16,22;UBERON:0006235,1.47e-16,22;UBERON:0008835,1.47e-16,22;UBERON:0003894,1.47e-16,22;UBERON:0004161,1.47e-16,22;UBERON:0008836,1.47e-16,22;UBERON:0005172,1.02e-14,49;UBERON:0005173,1.02e-14,49;UBERON:0002417,1.02e-14,49;UBERON:0000916,1.02e-14,49;UBERON:0002365,6.79e-14,25;UBERON:0002330,6.79e-14,25;UBERON:0003104,3.44e-10,61;UBERON:0009142,3.44e-10,61;UBERON:0004921,9.39e-10,114;UBERON:0005409,1.07e-09,47;UBERON:0005177,1.25e-09,79;UBERON:0001007,2.17e-09,116;UBERON:0001555,2.17e-09,116;UBERON:0007026,2.17e-09,116;UBERON:0004119,4.87e-09,118;UBERON:0000925,4.87e-09,118;UBERON:0006595,4.87e-09,118;UBERON:0009569,8.06e-09,66;UBERON:0002113,1.00e-07,14;UBERON:0003918,1.00e-07,14;UBERON:0011143,1.00e-07,14;UBERON:0005095,1.00e-07,14;UBERON:0007687,1.00e-07,14;UBERON:0002100,2.26e-07,90;UBERON:0003929,3.33e-07,55 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,3.62957053568196,3.00537437967808,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.10556277196391,0.297872853602656,0,0.799962113967033,0.68822784320151,1.72269589234506,0.430761996159075,1.29282739611533,1.71021077510736,1.51218077855958,1.55211357458713,0,0,0,0.577703239502549,0.997407872150954,1.42918549383658,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.638436690425939,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0.0755715601067855,1.15945795480671,1.72084775396277,0.679971333707751,4.31762553310254,7.14754059192436,4.03224198387602,1.54488862144927,0,0,0,0,0,0,0,0.216491041011214,0,0,2.51204535381932,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0,0,4.94389935468748,0.144599356919912,0.884610551949874,0,0.883366073841574,0,5.59175283654366,0.292780797011547,0.83778682725382,1.78819938646014,0,0,0,0.149790639404823,0,0,0,0,1.0389402227978,0.324482526135515,0.611036183101898,0.248813941220186,0.505445516867349,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0,0.590292695242212,0.462801338662135,0.697601834251224,0,0.467061369468678,0.658239399653922,0.656669856316381,0.729619285912702,1.31579988682799,0.439100230582101,0.805238512562231,0,0.102904612379284,3.30418782983798,5.55346189993443,0.213288250535234,0,1.41754207454303,1.21010114774006,3.55804870151792,1.33157938278791,1.42358718463353,2.14108641141214,3.2673577144035,1.39269530428806,2.14460495831032,0.898819408654221,0.432276099749388,1.7922714592893,0.948339504765408,2.05647322697512,4.50830942692322,1.83286195060783,1.93952487167626,1.33258057791605,2.15004226222475,5.31396532726568,2.82597710114475,1.97435462274881,12.4510103376603,0,0.786235980452812,0.449724224769707,1.62288097110802,2.17059443777175,2.03700681425136,2.5892652370573,1.94562272130042,1.37280706594041,5.75072826109418,1.11642284300551,3.12037673114561,4.54641980304801,2.33216637578486,2.41221760681684,0.184753190166605,0.189491411770485,0.488894929326078,0.678980343100753,0.469380496577004,0.335012514883631,0.476087281772027,0.585400943573396,0.472905432318573,0.44292937929755,0.478364305972461,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.35613120733451,0.81443479676788,0.164970122972535,0,1.21390318077491,1.81394134178851,2.07465587731488,1.47650946440386,0.614870295887855,1.03371317267288,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0.32977250588296,0.161464426695906,0.180938774784468,0,0.328281799490123,2.04036585640896,0,0,0.412773735926445,0,0,0,0,0,0,0.276399947608848,0,0,0.813277868507395,0.540026704109006,0.209088296014469,0.218362563746178,0.404593039154462,0.41326727862668,0.26175594198403,1.68499465279331,0,0,0,0,0,0,0,0.352071715937262,0.39061315453185,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0.192423683280659,0,0.453460767230423,0.221985953374065,0,0,0,1.50145980360946,0.183151624267265,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0.486213434136588,0.419226325255965,0.551530525350042,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.561849044819294,0.704276676453562,0.516919220600519,1.42888107384922,0.347652977834566,0,1.23625770240992,1.03039244094078,0.685738504770831,1.24233064311536,0,0.290692833264657,0.941093804153306,1.01537529470012,1.09756783723664,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.492522411877817,1.63692417267876,0.619747364743864,1.15743966588685,0.249810577937946,0.467863216890817,0.214871054048298,1.91288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p12@Rreb1 | |||
}} |
Revision as of 00:27, 13 September 2013
Short description: | p12@Rreb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Rreb1_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_NM_001177868, NR_033615, uc007qcx.2, uc007qcy.2_5end |
EntrezGene: | Rreb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.