FFCP PHASE1:Mm9::chr6:136121841..136121867,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14812|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=39bp_to_uc009elr.1_5end|description=CAGE_peak_6_at_Grin2b_5end|id=chr6:136121841..136121867,-|ontology_enrichment_celltype=CL:0000117!5.10e-21!23;CL:0000337!5.10e-21!23;CL:0000540!2.91e-13!33;CL:0000047!2.91e-13!33;CL:0000031!2.91e-13!33;CL:0000404!2.91e-13!33;CL:0000393!6.89e-11!39;CL:0000211!6.89e-11!39;CL:0002319!2.15e-08!43;CL:0000221!4.86e-08!44;CL:0000133!4.86e-08!44;CL:0000055!7.65e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-32,23;CL:0000337,2.36e-32,23;CL:0000540,7.92e-21,33;CL:0000047,7.92e-21,33;CL:0000031,7.92e-21,33;CL:0000404,7.92e-21,33;CL:0000393,9.13e-17,39;CL:0000211,9.13e-17,39;CL:0002319,1.07e-14,43;CL:0000221,3.08e-14,44;CL:0000133,3.08e-14,44;CL:0002321,5.03e-07,70;CL:0002609,9.05e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.25e-30!34;UBERON:0001049!1.81e-25!52;UBERON:0005068!1.81e-25!52;UBERON:0006241!1.81e-25!52;UBERON:0007135!1.81e-25!52;UBERON:0002791!3.00e-25!29;UBERON:0003528!3.00e-25!29;UBERON:0001893!3.00e-25!29;UBERON:0001017!5.56e-24!73;UBERON:0005743!5.56e-24!73;UBERON:0000955!6.69e-24!50;UBERON:0006238!6.69e-24!50;UBERON:0000073!6.79e-23!75;UBERON:0001016!6.79e-23!75;UBERON:0002616!6.94e-23!49;UBERON:0000033!2.28e-21!63;UBERON:0002346!1.52e-20!71;UBERON:0003075!1.52e-20!71;UBERON:0007284!1.52e-20!71;UBERON:0003080!2.20e-20!40;UBERON:0003056!4.17e-20!49;UBERON:0002780!1.87e-19!39;UBERON:0001890!1.87e-19!39;UBERON:0006240!1.87e-19!39;UBERON:0000956!6.68e-18!21;UBERON:0001869!6.68e-18!21;UBERON:0000203!6.68e-18!21;UBERON:0004121!8.07e-18!102;UBERON:0000924!8.07e-18!102;UBERON:0006601!8.07e-18!102;UBERON:0002619!1.20e-14!17;UBERON:0002021!7.23e-13!10;UBERON:0000411!7.23e-13!10;UBERON:0001950!7.23e-13!10;UBERON:0007811!7.10e-12!86;UBERON:0000153!4.84e-11!94;UBERON:0002420!2.01e-08!8;UBERON:0007245!2.01e-08!8;UBERON:0010009!2.01e-08!8;UBERON:0010011!2.01e-08!8;UBERON:0000454!2.01e-08!8;UBERON:0002240!9.31e-07!6;UBERON:0005174!9.31e-07!6;UBERON:0001137!9.31e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.54e-49,34;UBERON:0000073,1.59e-44,54;UBERON:0001049,5.59e-41,52;UBERON:0005068,5.59e-41,52;UBERON:0006241,5.59e-41,52;UBERON:0007135,5.59e-41,52;UBERON:0001017,8.57e-41,73;UBERON:0003528,1.40e-40,29;UBERON:0002791,1.40e-40,29;UBERON:0001893,1.40e-40,29;UBERON:0001016,1.92e-39,75;UBERON:0003080,2.97e-35,40;UBERON:0002780,1.27e-33,39;UBERON:0001890,1.27e-33,39;UBERON:0006240,1.27e-33,39;UBERON:0002346,1.79e-33,64;UBERON:0003075,1.79e-33,64;UBERON:0007284,1.79e-33,64;UBERON:0000955,2.01e-33,47;UBERON:0006238,2.01e-33,47;UBERON:0002616,9.53e-32,46;UBERON:0004121,1.35e-30,95;UBERON:0000924,1.35e-30,95;UBERON:0006601,1.35e-30,95;UBERON:0003056,2.71e-29,49;UBERON:0010371,3.24e-28,73;UBERON:0000956,7.22e-28,21;UBERON:0001869,7.22e-28,21;UBERON:0000203,7.22e-28,21;UBERON:0002619,4.52e-25,17;UBERON:0002021,3.83e-21,10;UBERON:0000411,3.83e-21,10;UBERON:0001950,3.83e-21,10;UBERON:0010314,1.69e-20,92;UBERON:0000025,8.30e-14,114;UBERON:0002420,1.91e-13,8;UBERON:0007245,1.91e-13,8;UBERON:0010009,1.91e-13,8;UBERON:0010011,1.91e-13,8;UBERON:0000454,1.91e-13,8;UBERON:0004111,2.54e-12,122;UBERON:0002240,1.43e-10,6;UBERON:0005174,1.43e-10,6;UBERON:0001137,1.43e-10,6;UBERON:0000369,1.90e-09,5;UBERON:0002435,1.90e-09,5;UBERON:0000204,1.90e-09,5;UBERON:0010082,1.90e-09,5;UBERON:0001948,3.70e-09,5;UBERON:0002315,3.70e-09,5;UBERON:0011216,4.08e-09,194;UBERON:0002950,3.55e-07,4;UBERON:0001891,3.55e-07,4;UBERON:0009616,3.55e-07,4;UBERON:0010286,3.55e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,1.05162480675691,2.28520787523043,1.54607978666129,1.22490799214954,1.15014565221884,3.67687514644008,4.40463523997555,4.21368215681119,1.99688493233117,2.2420668914133,2.65314166446988,1.56274011167028,1.3959149950069,1.12552522006336,1.68078072554491,2.65165726926301,4.12877874317399,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.69623150928681,6.40500843946077,3.14135880282161,9.03886464999838,7.41574826257959,3.74018480207208,5.67844420737152,0,0,0,0,0,0,0,0.30140963567143,0.272145996605311,0.2562274405697,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,5.14523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0,0,0.283076530788832,0,0,0,6.10510501201433,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,1.66882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| ||
|EntrezGene=14812 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt= | |||
|association_with_transcript=39bp_to_uc009elr.1_5end | |||
|description=CAGE_peak_6_at_Grin2b_5end | |||
|id=chr6:136121841..136121867,- | |||
|ontology_enrichment_celltype=CL:0000117!5.10e-21!23;CL:0000337!5.10e-21!23;CL:0000540!2.91e-13!33;CL:0000047!2.91e-13!33;CL:0000031!2.91e-13!33;CL:0000404!2.91e-13!33;CL:0000393!6.89e-11!39;CL:0000211!6.89e-11!39;CL:0002319!2.15e-08!43;CL:0000221!4.86e-08!44;CL:0000133!4.86e-08!44;CL:0000055!7.65e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-32,23;CL:0000337,2.36e-32,23;CL:0000540,7.92e-21,33;CL:0000047,7.92e-21,33;CL:0000031,7.92e-21,33;CL:0000404,7.92e-21,33;CL:0000393,9.13e-17,39;CL:0000211,9.13e-17,39;CL:0002319,1.07e-14,43;CL:0000221,3.08e-14,44;CL:0000133,3.08e-14,44;CL:0002321,5.03e-07,70;CL:0002609,9.05e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.25e-30!34;UBERON:0001049!1.81e-25!52;UBERON:0005068!1.81e-25!52;UBERON:0006241!1.81e-25!52;UBERON:0007135!1.81e-25!52;UBERON:0002791!3.00e-25!29;UBERON:0003528!3.00e-25!29;UBERON:0001893!3.00e-25!29;UBERON:0001017!5.56e-24!73;UBERON:0005743!5.56e-24!73;UBERON:0000955!6.69e-24!50;UBERON:0006238!6.69e-24!50;UBERON:0000073!6.79e-23!75;UBERON:0001016!6.79e-23!75;UBERON:0002616!6.94e-23!49;UBERON:0000033!2.28e-21!63;UBERON:0002346!1.52e-20!71;UBERON:0003075!1.52e-20!71;UBERON:0007284!1.52e-20!71;UBERON:0003080!2.20e-20!40;UBERON:0003056!4.17e-20!49;UBERON:0002780!1.87e-19!39;UBERON:0001890!1.87e-19!39;UBERON:0006240!1.87e-19!39;UBERON:0000956!6.68e-18!21;UBERON:0001869!6.68e-18!21;UBERON:0000203!6.68e-18!21;UBERON:0004121!8.07e-18!102;UBERON:0000924!8.07e-18!102;UBERON:0006601!8.07e-18!102;UBERON:0002619!1.20e-14!17;UBERON:0002021!7.23e-13!10;UBERON:0000411!7.23e-13!10;UBERON:0001950!7.23e-13!10;UBERON:0007811!7.10e-12!86;UBERON:0000153!4.84e-11!94;UBERON:0002420!2.01e-08!8;UBERON:0007245!2.01e-08!8;UBERON:0010009!2.01e-08!8;UBERON:0010011!2.01e-08!8;UBERON:0000454!2.01e-08!8;UBERON:0002240!9.31e-07!6;UBERON:0005174!9.31e-07!6;UBERON:0001137!9.31e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.54e-49,34;UBERON:0000073,1.59e-44,54;UBERON:0001049,5.59e-41,52;UBERON:0005068,5.59e-41,52;UBERON:0006241,5.59e-41,52;UBERON:0007135,5.59e-41,52;UBERON:0001017,8.57e-41,73;UBERON:0003528,1.40e-40,29;UBERON:0002791,1.40e-40,29;UBERON:0001893,1.40e-40,29;UBERON:0001016,1.92e-39,75;UBERON:0003080,2.97e-35,40;UBERON:0002780,1.27e-33,39;UBERON:0001890,1.27e-33,39;UBERON:0006240,1.27e-33,39;UBERON:0002346,1.79e-33,64;UBERON:0003075,1.79e-33,64;UBERON:0007284,1.79e-33,64;UBERON:0000955,2.01e-33,47;UBERON:0006238,2.01e-33,47;UBERON:0002616,9.53e-32,46;UBERON:0004121,1.35e-30,95;UBERON:0000924,1.35e-30,95;UBERON:0006601,1.35e-30,95;UBERON:0003056,2.71e-29,49;UBERON:0010371,3.24e-28,73;UBERON:0000956,7.22e-28,21;UBERON:0001869,7.22e-28,21;UBERON:0000203,7.22e-28,21;UBERON:0002619,4.52e-25,17;UBERON:0002021,3.83e-21,10;UBERON:0000411,3.83e-21,10;UBERON:0001950,3.83e-21,10;UBERON:0010314,1.69e-20,92;UBERON:0000025,8.30e-14,114;UBERON:0002420,1.91e-13,8;UBERON:0007245,1.91e-13,8;UBERON:0010009,1.91e-13,8;UBERON:0010011,1.91e-13,8;UBERON:0000454,1.91e-13,8;UBERON:0004111,2.54e-12,122;UBERON:0002240,1.43e-10,6;UBERON:0005174,1.43e-10,6;UBERON:0001137,1.43e-10,6;UBERON:0000369,1.90e-09,5;UBERON:0002435,1.90e-09,5;UBERON:0000204,1.90e-09,5;UBERON:0010082,1.90e-09,5;UBERON:0001948,3.70e-09,5;UBERON:0002315,3.70e-09,5;UBERON:0011216,4.08e-09,194;UBERON:0002950,3.55e-07,4;UBERON:0001891,3.55e-07,4;UBERON:0009616,3.55e-07,4;UBERON:0010286,3.55e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,2.02316460859598,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,1.05162480675691,2.28520787523043,1.54607978666129,1.22490799214954,1.15014565221884,3.67687514644008,4.40463523997555,4.21368215681119,1.99688493233117,2.2420668914133,2.65314166446988,1.56274011167028,1.3959149950069,1.12552522006336,1.68078072554491,2.65165726926301,4.12877874317399,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.69623150928681,6.40500843946077,3.14135880282161,9.03886464999838,7.41574826257959,3.74018480207208,5.67844420737152,0,0,0,0,0,0,0,0.30140963567143,0.272145996605311,0.2562274405697,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41159794256509,5.14523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0,0,0.283076530788832,0,0,0,6.10510501201433,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,20.8958181768315,16.5717085142584,23.4887160510153,16.6697586873377,13.0165678756422,9.82012066606611,19.5756525067224,15.7612421128477,12.6879874515577,10.3552062350364,0,0,0,1.21553358534147,0,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.37456602987953,0.448176066834085,0.229741875822453,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,0.441596760403192,1.02860775715625,0.354951612318675,1.43061713968393,0.726732083161643,0.564656282491984,0.761531471025089,0.182927972872773,1.57841826862706,0,0.561142271657738,0.593175090620871,0.788035859004508,0.818462086339379,0.309873682371932,0.578719832943424,0.749431733813838,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p6@Grin2b | |||
}} |
Revision as of 09:11, 14 September 2013
Short description: | p6@Grin2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Grin2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 39bp_to_uc009elr.1_5end |
EntrezGene: | Grin2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.36e-32 | 23 |
neuroblast (sensu Vertebrata) | 2.36e-32 | 23 |
neuron | 7.92e-21 | 33 |
neuronal stem cell | 7.92e-21 | 33 |
neuroblast | 7.92e-21 | 33 |
electrically signaling cell | 7.92e-21 | 33 |
electrically responsive cell | 9.13e-17 | 39 |
electrically active cell | 9.13e-17 | 39 |
neural cell | 1.07e-14 | 43 |
ectodermal cell | 3.08e-14 | 44 |
neurectodermal cell | 3.08e-14 | 44 |
embryonic cell | 5.03e-07 | 70 |
neuron of cerebral cortex | 9.05e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.