FFCP PHASE1:Mm9::chr2:31939141..31939154,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=241303|HGNC=|MCL_coexpression_id=33|UniProt=A2ATN4,Q8C552|association_with_transcript=70bp_to_NM_175511,uc008jek.1_5end|description=CAGE_peak_6_at_Fam78a_5end|id=chr2:31939141..31939154,-|ontology_enrichment_celltype=CL:0000084!1.33e-08!11;CL:0000827!1.33e-08!11;CL:0000838!1.40e-07!12;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.45e-08,9;CL:0000789,2.45e-08,9;CL:0002420,2.45e-08,9;CL:0002419,2.45e-08,9;CL:0000790,2.45e-08,9;CL:0000084,9.48e-07,11;CL:0000827,9.48e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.99e-15!29;UBERON:0002193!4.68e-13!48;UBERON:0003081!5.01e-13!88;UBERON:0006562!5.84e-13!24;UBERON:0001557!5.84e-13!24;UBERON:0001042!5.84e-13!24;UBERON:0008814!5.84e-13!24;UBERON:0009145!5.84e-13!24;UBERON:0002370!1.15e-12!23;UBERON:0000974!1.15e-12!23;UBERON:0004807!1.15e-12!23;UBERON:0005058!1.15e-12!23;UBERON:0003351!1.15e-12!23;UBERON:0009113!1.15e-12!23;UBERON:0003295!1.15e-12!23;UBERON:0009722!1.15e-12!23;UBERON:0005562!1.15e-12!23;UBERON:0007690!1.15e-12!23;UBERON:0003408!8.20e-12!24;UBERON:0002390!1.65e-11!45;UBERON:0003061!1.65e-11!45;UBERON:0002405!8.52e-11!70;UBERON:0000072!1.23e-10!27;UBERON:0005057!1.74e-10!51;UBERON:0000063!1.29e-08!35;UBERON:0003929!1.39e-07!55;UBERON:0000065!1.48e-07!41;UBERON:0001004!3.48e-07!42;UBERON:0001007!3.97e-07!128;UBERON:0001555!3.97e-07!128;UBERON:0007026!3.97e-07!128;UBERON:0004119!9.06e-07!130;UBERON:0000925!9.06e-07!130;UBERON:0006595!9.06e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.03e-26,29;UBERON:0005057,7.03e-26,29;UBERON:0002370,4.99e-23,23;UBERON:0000974,4.99e-23,23;UBERON:0004807,4.99e-23,23;UBERON:0005058,4.99e-23,23;UBERON:0003351,4.99e-23,23;UBERON:0009113,4.99e-23,23;UBERON:0003295,4.99e-23,23;UBERON:0009722,4.99e-23,23;UBERON:0005562,4.99e-23,23;UBERON:0007690,4.99e-23,23;UBERON:0006562,6.13e-22,24;UBERON:0003408,6.13e-22,24;UBERON:0001557,6.13e-22,24;UBERON:0001042,6.13e-22,24;UBERON:0008814,6.13e-22,24;UBERON:0009145,6.13e-22,24;UBERON:0000077,8.59e-21,35;UBERON:0000072,3.73e-19,27;UBERON:0002193,4.89e-16,48;UBERON:0002405,4.89e-16,48;UBERON:0002390,2.49e-15,45;UBERON:0003061,2.49e-15,45;UBERON:0007811,1.37e-13,36;UBERON:0003929,7.48e-12,55;UBERON:0004921,8.65e-12,114;UBERON:0000065,1.47e-11,41;UBERON:0001007,1.71e-11,116;UBERON:0001555,1.71e-11,116;UBERON:0007026,1.71e-11,116;UBERON:0001004,3.28e-11,42;UBERON:0004119,3.31e-11,118;UBERON:0000925,3.31e-11,118;UBERON:0006595,3.31e-11,118;UBERON:0000153,7.04e-11,43;UBERON:0000490,2.93e-09,66;UBERON:0005911,1.07e-08,69;UBERON:0002368,4.62e-08,60;UBERON:0001041,5.30e-08,80;UBERON:0002530,3.38e-07,65;UBERON:0003081,4.17e-07,87|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,1.51232105653415,0,0,0,1.54947988129892,0.703943610758334,0.70219357896598,0.171217968225505,0.159544317990673,5.9920255475922,7.16847299835779,0,0.404950534779652,0,0.473193248037357,0.959801035240171,0.84877930359606,0.0850432901510698,0.794327609607082,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0.430942465371778,1.52018735565099,2.01624103807945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,4.7053131879945,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.07150306917737,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,1.86391761218122,0,0,1.53274233125155,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0.621377317606506,0.234526059981096,0.720248245844059,0.710234206755631,0.787056926989615,0.617068451549513,0,0.804820204198858,0.350296027101508,0.493679549740441,0.820837320395476,0.243206428637567,0.292399974850665,2.63460138349261,0.134206418760372,0,0.205809224758569,3.96502539580558,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,0.995706366271836,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.83422552858047,0.589676985339609,0.899448449539415,1.21716072833102,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,1.02522528478712,0,0.185194527369712,0.376736914009382,1.6403307326523,1.14389086603261,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0.90730481304255,0,0.56369293868419,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0.288030006257865,6.95224465381992,0.202725215290164,0.102710957164827,1.16928740680016,3.04345382634718,2.18549490259391,2.88469078847925,2.51072196196781,3.43285929823702,3.42930629947499,3.93222122033678,4.58052039476836,3.2712026157712,5.49321440253374,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.384150914429216,0,0,0.347652977834566,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0.220591419119515,0|short_description=p6@Fam78a}} | ||
|EntrezGene=241303 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=A2ATN4,Q8C552 | |||
|association_with_transcript=70bp_to_NM_175511,uc008jek.1_5end | |||
|description=CAGE_peak_6_at_Fam78a_5end | |||
|id=chr2:31939141..31939154,- | |||
|ontology_enrichment_celltype=CL:0000084!1.33e-08!11;CL:0000827!1.33e-08!11;CL:0000838!1.40e-07!12;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.45e-08,9;CL:0000789,2.45e-08,9;CL:0002420,2.45e-08,9;CL:0002419,2.45e-08,9;CL:0000790,2.45e-08,9;CL:0000084,9.48e-07,11;CL:0000827,9.48e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.99e-15!29;UBERON:0002193!4.68e-13!48;UBERON:0003081!5.01e-13!88;UBERON:0006562!5.84e-13!24;UBERON:0001557!5.84e-13!24;UBERON:0001042!5.84e-13!24;UBERON:0008814!5.84e-13!24;UBERON:0009145!5.84e-13!24;UBERON:0002370!1.15e-12!23;UBERON:0000974!1.15e-12!23;UBERON:0004807!1.15e-12!23;UBERON:0005058!1.15e-12!23;UBERON:0003351!1.15e-12!23;UBERON:0009113!1.15e-12!23;UBERON:0003295!1.15e-12!23;UBERON:0009722!1.15e-12!23;UBERON:0005562!1.15e-12!23;UBERON:0007690!1.15e-12!23;UBERON:0003408!8.20e-12!24;UBERON:0002390!1.65e-11!45;UBERON:0003061!1.65e-11!45;UBERON:0002405!8.52e-11!70;UBERON:0000072!1.23e-10!27;UBERON:0005057!1.74e-10!51;UBERON:0000063!1.29e-08!35;UBERON:0003929!1.39e-07!55;UBERON:0000065!1.48e-07!41;UBERON:0001004!3.48e-07!42;UBERON:0001007!3.97e-07!128;UBERON:0001555!3.97e-07!128;UBERON:0007026!3.97e-07!128;UBERON:0004119!9.06e-07!130;UBERON:0000925!9.06e-07!130;UBERON:0006595!9.06e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.03e-26,29;UBERON:0005057,7.03e-26,29;UBERON:0002370,4.99e-23,23;UBERON:0000974,4.99e-23,23;UBERON:0004807,4.99e-23,23;UBERON:0005058,4.99e-23,23;UBERON:0003351,4.99e-23,23;UBERON:0009113,4.99e-23,23;UBERON:0003295,4.99e-23,23;UBERON:0009722,4.99e-23,23;UBERON:0005562,4.99e-23,23;UBERON:0007690,4.99e-23,23;UBERON:0006562,6.13e-22,24;UBERON:0003408,6.13e-22,24;UBERON:0001557,6.13e-22,24;UBERON:0001042,6.13e-22,24;UBERON:0008814,6.13e-22,24;UBERON:0009145,6.13e-22,24;UBERON:0000077,8.59e-21,35;UBERON:0000072,3.73e-19,27;UBERON:0002193,4.89e-16,48;UBERON:0002405,4.89e-16,48;UBERON:0002390,2.49e-15,45;UBERON:0003061,2.49e-15,45;UBERON:0007811,1.37e-13,36;UBERON:0003929,7.48e-12,55;UBERON:0004921,8.65e-12,114;UBERON:0000065,1.47e-11,41;UBERON:0001007,1.71e-11,116;UBERON:0001555,1.71e-11,116;UBERON:0007026,1.71e-11,116;UBERON:0001004,3.28e-11,42;UBERON:0004119,3.31e-11,118;UBERON:0000925,3.31e-11,118;UBERON:0006595,3.31e-11,118;UBERON:0000153,7.04e-11,43;UBERON:0000490,2.93e-09,66;UBERON:0005911,1.07e-08,69;UBERON:0002368,4.62e-08,60;UBERON:0001041,5.30e-08,80;UBERON:0002530,3.38e-07,65;UBERON:0003081,4.17e-07,87 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,1.51232105653415,0,0,0,1.54947988129892,0.703943610758334,0.70219357896598,0.171217968225505,0.159544317990673,5.9920255475922,7.16847299835779,0,0.404950534779652,0,0.473193248037357,0.959801035240171,0.84877930359606,0.0850432901510698,0.794327609607082,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0.430942465371778,1.52018735565099,2.01624103807945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,4.7053131879945,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.07150306917737,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,1.86391761218122,0,0,1.53274233125155,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0.621377317606506,0.234526059981096,0.720248245844059,0.710234206755631,0.787056926989615,0.617068451549513,0,0.804820204198858,0.350296027101508,0.493679549740441,0.820837320395476,0.243206428637567,0.292399974850665,2.63460138349261,0.134206418760372,0,0.205809224758569,3.96502539580558,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,0.995706366271836,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.83422552858047,0.589676985339609,0.899448449539415,1.21716072833102,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,1.02522528478712,0,0.185194527369712,0.376736914009382,1.6403307326523,1.14389086603261,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0.90730481304255,0,0.56369293868419,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0.288030006257865,6.95224465381992,0.202725215290164,0.102710957164827,1.16928740680016,3.04345382634718,2.18549490259391,2.88469078847925,2.51072196196781,3.43285929823702,3.42930629947499,3.93222122033678,4.58052039476836,3.2712026157712,5.49321440253374,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.384150914429216,0,0,0.347652977834566,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p6@Fam78a | |||
}} |
Revision as of 23:45, 13 September 2013
Short description: | p6@Fam78a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fam78a_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 70bp_to_NM_175511, uc008jek.1_5end |
EntrezGene: | Fam78a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.45e-08 | 9 |
alpha-beta T cell | 2.45e-08 | 9 |
immature T cell | 2.45e-08 | 9 |
mature T cell | 2.45e-08 | 9 |
immature alpha-beta T cell | 2.45e-08 | 9 |
T cell | 9.48e-07 | 11 |
pro-T cell | 9.48e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.