FFCP PHASE1:Hg19::chr1:8484872..8484891,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=473|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9965|TSSclassifier=W|UniProt=|association_with_transcript=380bp_to_ENST00000488215_5end|coexpression_cluster_id=C9|description=CAGE_peak_47_at_RERE_5end|id=chr1:8484872..8484891,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;8.94e-25;3!UBERON:0004874;3.25e-19;1!UBERON:0008814;1.72e-10;2!UBERON:0010056;1.72e-10;2|ontology_enrichment_disease=DOID:114!8.59e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.68e-50!115;UBERON:0001049!6.11e-16!57;UBERON:0005068!6.11e-16!57;UBERON:0006241!6.11e-16!57;UBERON:0007135!6.11e-16!57;UBERON:0002616!3.25e-15!59;UBERON:0002619!5.87e-14!22;UBERON:0001017!7.03e-14!82;UBERON:0003075!2.80e-13!86;UBERON:0007284!2.80e-13!86;UBERON:0002020!4.51e-13!34;UBERON:0003528!4.51e-13!34;UBERON:0001893!5.17e-13!34;UBERON:0005743!6.08e-13!86;UBERON:0001950!6.24e-13!20;UBERON:0002346!2.11e-12!90;UBERON:0001869!3.27e-12!32;UBERON:0000073!3.64e-12!94;UBERON:0001016!3.64e-12!94;UBERON:0000956!5.07e-12!25;UBERON:0000203!5.07e-12!25;UBERON:0000955!5.66e-12!69;UBERON:0006238!5.66e-12!69;UBERON:0002780!7.78e-12!41;UBERON:0001890!7.78e-12!41;UBERON:0006240!7.78e-12!41;UBERON:0002791!1.10e-11!33;UBERON:0003080!1.81e-11!42;UBERON:0001871!3.21e-11!7;UBERON:0000200!5.19e-11!6;UBERON:0002680!3.19e-10!9;UBERON:0001895!3.19e-10!9;UBERON:0010092!3.19e-10!9;UBERON:0002771!1.31e-08!3;UBERON:0003135!1.50e-08!11;UBERON:0000988!6.23e-08!3;UBERON:0000153!1.24e-07!129;UBERON:0007811!1.24e-07!129;UBERON:0004733!1.79e-07!12;UBERON:0002028!1.79e-07!12;UBERON:0007277!1.79e-07!12;UBERON:0000033!1.90e-07!123;UBERON:0004121!3.20e-07!169;UBERON:0000924!6.81e-07!173;UBERON:0006601!6.81e-07!173;UBERON:0004732!7.70e-07!13;UBERON:0003056!8.12e-07!61|ontology_enrichment_uberon_v019=UBERON:0001389;9.81e-20;1!UBERON:0000026;9.81e-20;1!UBERON:0008784;9.81e-20;1!UBERON:0006058;9.81e-20;1!UBERON:0003663;9.81e-20;1!UBERON:0004256;9.81e-20;1!UBERON:0004708;9.81e-20;1!UBERON:0002101;9.81e-20;1!UBERON:0004709;9.81e-20;1!UBERON:0002529;9.81e-20;1!UBERON:0010538;9.81e-20;1!UBERON:0003661;9.81e-20;1!UBERON:0010890;9.81e-20;1!UBERON:0002471;9.81e-20;1!UBERON:0001383;9.81e-20;1!UBERON:0010758;9.81e-20;1!UBERON:0010707;9.81e-20;1!UBERON:0000978;9.81e-20;1!UBERON:0002103;9.81e-20;1!UBERON:0001665;9.81e-20;1!UBERON:0003823;9.81e-20;1!UBERON:0000154;9.81e-20;1!UBERON:0010709;9.81e-20;1!UBERON:0000989;3.25e-19;1!UBERON:0000996;3.25e-19;1!UBERON:0002135;3.25e-19;1!UBERON:0008811;3.25e-19;1!UBERON:0002037;6.50e-13;6!UBERON:0005090;1.50e-10;2!UBERON:0001630;1.50e-10;2!UBERON:0000341;2.72e-10;2!UBERON:0002133;2.72e-10;2!UBERON:0002680;6.35e-09;9!UBERON:0001895;6.35e-09;9!UBERON:0001723;2.05e-07;3!UBERON:0001033;2.05e-07;3!UBERON:0003978;2.79e-07;3!UBERON:0000946;2.79e-07;3!UBERON:0004733;6.54e-07;12!UBERON:0002028;6.54e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0005418,8.95e-20,1;UBERON:0001389,8.95e-20,1;UBERON:0000026,8.95e-20,1;UBERON:0008784,8.95e-20,1;UBERON:0006058,8.95e-20,1;UBERON:0003663,8.95e-20,1;UBERON:0004256,8.95e-20,1;UBERON:0004708,8.95e-20,1;UBERON:0002101,8.95e-20,1;UBERON:0004709,8.95e-20,1;UBERON:0002529,8.95e-20,1;UBERON:0010538,8.95e-20,1;UBERON:0003661,8.95e-20,1;UBERON:0010890,8.95e-20,1;UBERON:0002471,8.95e-20,1;UBERON:0001383,8.95e-20,1;UBERON:0004357,8.95e-20,1;UBERON:0004347,8.95e-20,1;UBERON:0005420,8.95e-20,1;UBERON:0005732,8.95e-20,1;UBERON:0010758,8.95e-20,1;UBERON:0010707,8.95e-20,1;UBERON:0000978,8.95e-20,1;UBERON:0002103,8.95e-20,1;UBERON:0001665,8.95e-20,1;UBERON:0003823,8.95e-20,1;UBERON:0000154,8.95e-20,1;UBERON:0010709,8.95e-20,1;UBERON:0005733,8.95e-20,1;UBERON:0005730,8.95e-20,1;UBERON:0000989,1.88e-19,1;UBERON:0008811,1.88e-19,1;UBERON:0006258,1.88e-19,1;UBERON:0005876,1.88e-19,1;UBERON:0004874,1.88e-19,1;UBERON:0002135,2.71e-19,1;UBERON:0000996,3.25e-19,1;UBERON:0007023,3.18e-15,114;UBERON:0002037,6.90e-13,6;UBERON:0006215,6.90e-13,6;UBERON:0005090,1.43e-10,2;UBERON:0001630,1.43e-10,2;UBERON:0002133,2.49e-10,2;UBERON:0000341,2.99e-10,2;UBERON:0002680,6.61e-09,9;UBERON:0001895,6.61e-09,9;UBERON:0010092,6.61e-09,9;UBERON:0001723,2.05e-07,3;UBERON:0001033,2.05e-07,3;UBERON:0010056,2.05e-07,3;UBERON:0003978,2.63e-07,3;UBERON:0009751,2.63e-07,3;UBERON:0000946,2.63e-07,3;UBERON:0002523,2.63e-07,3;UBERON:0005983,2.63e-07,3;UBERON:0002165,2.63e-07,3;UBERON:0002062,2.63e-07,3;UBERON:0007280,2.63e-07,3;UBERON:0004733,6.74e-07,12;UBERON:0002028,6.74e-07,12;UBERON:0007277,6.74e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=380bp_to_ENST00000488215_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_47_at_RERE_5end | |||
|id=chr1:8484872..8484891,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.94e-25;3!UBERON:0004874;3.25e-19;1!UBERON:0008814;1.72e-10;2!UBERON:0010056;1.72e-10;2 | |||
|ontology_enrichment_disease=DOID:114!8.59e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.68e-50!115;UBERON:0001049!6.11e-16!57;UBERON:0005068!6.11e-16!57;UBERON:0006241!6.11e-16!57;UBERON:0007135!6.11e-16!57;UBERON:0002616!3.25e-15!59;UBERON:0002619!5.87e-14!22;UBERON:0001017!7.03e-14!82;UBERON:0003075!2.80e-13!86;UBERON:0007284!2.80e-13!86;UBERON:0002020!4.51e-13!34;UBERON:0003528!4.51e-13!34;UBERON:0001893!5.17e-13!34;UBERON:0005743!6.08e-13!86;UBERON:0001950!6.24e-13!20;UBERON:0002346!2.11e-12!90;UBERON:0001869!3.27e-12!32;UBERON:0000073!3.64e-12!94;UBERON:0001016!3.64e-12!94;UBERON:0000956!5.07e-12!25;UBERON:0000203!5.07e-12!25;UBERON:0000955!5.66e-12!69;UBERON:0006238!5.66e-12!69;UBERON:0002780!7.78e-12!41;UBERON:0001890!7.78e-12!41;UBERON:0006240!7.78e-12!41;UBERON:0002791!1.10e-11!33;UBERON:0003080!1.81e-11!42;UBERON:0001871!3.21e-11!7;UBERON:0000200!5.19e-11!6;UBERON:0002680!3.19e-10!9;UBERON:0001895!3.19e-10!9;UBERON:0010092!3.19e-10!9;UBERON:0002771!1.31e-08!3;UBERON:0003135!1.50e-08!11;UBERON:0000988!6.23e-08!3;UBERON:0000153!1.24e-07!129;UBERON:0007811!1.24e-07!129;UBERON:0004733!1.79e-07!12;UBERON:0002028!1.79e-07!12;UBERON:0007277!1.79e-07!12;UBERON:0000033!1.90e-07!123;UBERON:0004121!3.20e-07!169;UBERON:0000924!6.81e-07!173;UBERON:0006601!6.81e-07!173;UBERON:0004732!7.70e-07!13;UBERON:0003056!8.12e-07!61 | |||
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|short_description=p47@RERE | |||
}} |
Revision as of 06:55, 12 September 2013
Short description: | p47@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_47_at_RERE_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 380bp_to_ENST00000488215_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.