FFCP PHASE1:Hg19::chr10:121485630..121485669,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22876|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17054|TSSclassifier=S|UniProt=Q9Y2H2|association_with_transcript=21bp_to_ENST00000361976,ENST00000369083,uc001len.3,uc001leo.2_5end|description=CAGE_peak_4_at_INPP5F_5end|id=chr10:121485630..121485669,+|ontology_enrichment_celltype=CL:0000738!3.01e-12!140;CL:0002031!1.96e-11!124;CL:0002087!5.17e-11!119;CL:0002057!1.88e-10!42;CL:0000037!2.25e-10!172;CL:0000566!2.25e-10!172;CL:0002032!2.19e-09!165;CL:0000837!2.19e-09!165;CL:0000557!5.83e-09!71;CL:0002009!1.17e-08!65;CL:0000860!1.42e-08!45;CL:0000839!2.80e-08!70;CL:0000988!3.22e-08!182;CL:0002194!5.77e-08!63;CL:0000576!5.77e-08!63;CL:0000040!5.77e-08!63;CL:0000559!5.77e-08!63;CL:0000766!4.76e-07!76|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000738,1.13e-13,136;CL:0002031,1.11e-12,120;CL:0002087,2.96e-12,115;CL:0000037,2.19e-11,168;CL:0000473,1.34e-10,48;CL:0000234,1.34e-10,48;CL:0000557,1.37e-10,67;CL:0000860,1.95e-10,42;CL:0002057,1.95e-10,42;CL:0002032,2.40e-10,161;CL:0000837,2.40e-10,161;CL:0002009,2.45e-10,61;CL:0000839,7.96e-10,66;CL:0002194,1.43e-09,59;CL:0000576,1.43e-09,59;CL:0000040,1.43e-09,59;CL:0000559,1.43e-09,59;CL:0000988,4.88e-09,177;CL:0000766,1.52e-08,72;CL:0000763,9.37e-08,108;CL:0000049,9.37e-08,108|ontology_enrichment_development_v019=CL:0002057;6.50e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.57e-16!115;UBERON:0001049!4.83e-10!57;UBERON:0005068!4.83e-10!57;UBERON:0006241!4.83e-10!57;UBERON:0007135!4.83e-10!57;UBERON:0002193!3.20e-09!112;UBERON:0002390!3.68e-09!102;UBERON:0003061!3.68e-09!102;UBERON:0001017!9.16e-09!82;UBERON:0002371!1.62e-08!80;UBERON:0005743!3.78e-08!86;UBERON:0000955!7.06e-08!69;UBERON:0006238!7.06e-08!69;UBERON:0002616!8.33e-08!59;UBERON:0000073!2.99e-07!94;UBERON:0001016!2.99e-07!94;UBERON:0001474!4.77e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.06e-17,114;UBERON:0002193,1.34e-10,108;UBERON:0002390,1.51e-10,98;UBERON:0003061,1.51e-10,98;UBERON:0002371,4.91e-10,76;UBERON:0002405,5.62e-10,93;UBERON:0001049,8.30e-10,56;UBERON:0005068,8.30e-10,56;UBERON:0006241,8.30e-10,56;UBERON:0007135,8.30e-10,56;UBERON:0001017,1.27e-08,81;UBERON:0000073,1.60e-08,53;UBERON:0002616,1.60e-08,53;UBERON:0001474,2.08e-08,82;UBERON:0004765,3.84e-08,90;UBERON:0001016,1.01e-07,89;UBERON:0000955,1.08e-07,68;UBERON:0006238,1.08e-07,68;UBERON:0001434,4.95e-07,100|phase1_expression=0.908391896352783,0.214100523890983,0.563817616383885,2.00146596706261,0.446961094427288,0.872338524100369,0,0.631719873426831,1.04474251279935,0.491467873003018,0,1.09220686065086,0.791300934685361,1.11389717664042,2.31978163009541,0,0.602694528023977,2.19093027116212,0.487932798790507,1.35433163884467,2.44800829493104,2.82109249330279,1.43117993565528,3.01123735160345,2.38531015230125,3.97349709889347,2.95562122019805,2.59745578335141,1.96682138424452,2.30297638858328,3.09632246632152,0.919421224478927,1.50602959389125,2.9580320813343,0.92960640696362,0.710846162437108,2.05520307534393,7.75593571944628,5.41470008169383,6.2933152507597,3.35873211359887,2.91504299417082,2.06060454107349,4.36194716338694,4.91238726795452,3.88134497900506,1.62700325833979,4.11167888021826,3.71647645074124,1.1507695692886,3.58624989140741,2.12834006899727,5.17118521104928,5.16387746867061,2.70852973188684,3.38836211176688,1.63743690034707,3.37085226667627,0.918251677112708,3.53021929783703,3.19668562899521,3.29851300186716,3.19141852194611,2.98357325372886,1.45104619314292,2.8369261234557,3.73693349397345,3.01498398308092,3.12889751052121,3.9093992046921,1.81619850790011,4.05105399586321,3.48108626184973,5.0701268714866,5.31510749912609,2.30624510059213,2.3589012540764,3.90459921387916,3.05378614724452,7.12531859353121,5.76858363877361,5.29726045917438,1.75996244461323,4.91524750135918,3.55803701545422,6.40095333849761,4.00395987036012,8.62128659931725,6.61044872784862,3.81621501814146,7.96898156753228,9.98303221930596,6.11637165000366,2.64342657158052,3.36305137788922,1.84368859342554,4.32761494250433,3.53709686474248,6.99045096598331,5.85152733867373,7.17028986593899,3.31413464014313,7.79306913631645,4.2335973616366,7.65975359434577,5.53834736459053,5.95768500283034,4.86747014957566,4.81219585971549,4.93313713811028,4.69795030235942,2.02862160014537,3.11401782640327,2.67540828089713,0,3.85251765171725,3.83220493601921,3.77990190030893,2.78321661221453,2.86708872891687,2.60433381542567,0.950452044448374,1.95747654801105,1.4078527226986,1.24930726552346,2.13099526839615,1.64225599384209,3.22570789159572,3.20928234940209,1.88271725047639,0,0.670700859703636,1.15076305659177,1.0843174571537,0.50133791063589,0.869079113764942,0,3.89307896242109,1.03988298880475,0.665188192387692,1.40535657109002,2.16115474571226,0.364295288292542,1.48313777113772,1.62273696827342,2.61194605948901,1.9943694077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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17054 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2H2 | |||
|association_with_transcript=21bp_to_ENST00000361976,ENST00000369083,uc001len.3,uc001leo.2_5end | |||
|description=CAGE_peak_4_at_INPP5F_5end | |||
|id=chr10:121485630..121485669,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.01e-12!140;CL:0002031!1.96e-11!124;CL:0002087!5.17e-11!119;CL:0002057!1.88e-10!42;CL:0000037!2.25e-10!172;CL:0000566!2.25e-10!172;CL:0002032!2.19e-09!165;CL:0000837!2.19e-09!165;CL:0000557!5.83e-09!71;CL:0002009!1.17e-08!65;CL:0000860!1.42e-08!45;CL:0000839!2.80e-08!70;CL:0000988!3.22e-08!182;CL:0002194!5.77e-08!63;CL:0000576!5.77e-08!63;CL:0000040!5.77e-08!63;CL:0000559!5.77e-08!63;CL:0000766!4.76e-07!76 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.13e-13,136;CL:0002031,1.11e-12,120;CL:0002087,2.96e-12,115;CL:0000037,2.19e-11,168;CL:0000473,1.34e-10,48;CL:0000234,1.34e-10,48;CL:0000557,1.37e-10,67;CL:0000860,1.95e-10,42;CL:0002057,1.95e-10,42;CL:0002032,2.40e-10,161;CL:0000837,2.40e-10,161;CL:0002009,2.45e-10,61;CL:0000839,7.96e-10,66;CL:0002194,1.43e-09,59;CL:0000576,1.43e-09,59;CL:0000040,1.43e-09,59;CL:0000559,1.43e-09,59;CL:0000988,4.88e-09,177;CL:0000766,1.52e-08,72;CL:0000763,9.37e-08,108;CL:0000049,9.37e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.50e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-16!115;UBERON:0001049!4.83e-10!57;UBERON:0005068!4.83e-10!57;UBERON:0006241!4.83e-10!57;UBERON:0007135!4.83e-10!57;UBERON:0002193!3.20e-09!112;UBERON:0002390!3.68e-09!102;UBERON:0003061!3.68e-09!102;UBERON:0001017!9.16e-09!82;UBERON:0002371!1.62e-08!80;UBERON:0005743!3.78e-08!86;UBERON:0000955!7.06e-08!69;UBERON:0006238!7.06e-08!69;UBERON:0002616!8.33e-08!59;UBERON:0000073!2.99e-07!94;UBERON:0001016!2.99e-07!94;UBERON:0001474!4.77e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.06e-17,114;UBERON:0002193,1.34e-10,108;UBERON:0002390,1.51e-10,98;UBERON:0003061,1.51e-10,98;UBERON:0002371,4.91e-10,76;UBERON:0002405,5.62e-10,93;UBERON:0001049,8.30e-10,56;UBERON:0005068,8.30e-10,56;UBERON:0006241,8.30e-10,56;UBERON:0007135,8.30e-10,56;UBERON:0001017,1.27e-08,81;UBERON:0000073,1.60e-08,53;UBERON:0002616,1.60e-08,53;UBERON:0001474,2.08e-08,82;UBERON:0004765,3.84e-08,90;UBERON:0001016,1.01e-07,89;UBERON:0000955,1.08e-07,68;UBERON:0006238,1.08e-07,68;UBERON:0001434,4.95e-07,100 | |||
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| |||
|short_description=p4@INPP5F | |||
}} |
Revision as of 12:03, 10 September 2013
Short description: | p4@INPP5F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_INPP5F_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000361976, ENST00000369083, uc001len.3, uc001leo.2_5end |
EntrezGene: | INPP5F |
HGNC: | 17054 |
UniProt: | Q9Y2H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.13e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 1.11e-12 | 120 |
nongranular leukocyte | 2.96e-12 | 115 |
hematopoietic stem cell | 2.19e-11 | 168 |
defensive cell | 1.34e-10 | 48 |
phagocyte | 1.34e-10 | 48 |
granulocyte monocyte progenitor cell | 1.37e-10 | 67 |
classical monocyte | 1.95e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-10 | 42 |
hematopoietic oligopotent progenitor cell | 2.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-10 | 161 |
macrophage dendritic cell progenitor | 2.45e-10 | 61 |
myeloid lineage restricted progenitor cell | 7.96e-10 | 66 |
monopoietic cell | 1.43e-09 | 59 |
monocyte | 1.43e-09 | 59 |
monoblast | 1.43e-09 | 59 |
promonocyte | 1.43e-09 | 59 |
hematopoietic cell | 4.88e-09 | 177 |
myeloid leukocyte | 1.52e-08 | 72 |
myeloid cell | 9.37e-08 | 108 |
common myeloid progenitor | 9.37e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.06e-17 | 114 |
hemolymphoid system | 1.34e-10 | 108 |
hematopoietic system | 1.51e-10 | 98 |
blood island | 1.51e-10 | 98 |
bone marrow | 4.91e-10 | 76 |
immune system | 5.62e-10 | 93 |
neural tube | 8.30e-10 | 56 |
neural rod | 8.30e-10 | 56 |
future spinal cord | 8.30e-10 | 56 |
neural keel | 8.30e-10 | 56 |
central nervous system | 1.27e-08 | 81 |
regional part of nervous system | 1.60e-08 | 53 |
regional part of brain | 1.60e-08 | 53 |
bone element | 2.08e-08 | 82 |
skeletal element | 3.84e-08 | 90 |
nervous system | 1.01e-07 | 89 |
brain | 1.08e-07 | 68 |
future brain | 1.08e-07 | 68 |
skeletal system | 4.95e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.