FFCP PHASE1:Hg19::chr11:10921615..10921626,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C475|description=CAGE_peak_at_chr11:10921615..10921626,+|id=chr11:10921615..10921626,+|ontology_enrichment_celltype=CL:0002057!5.76e-57!42;CL:0000860!3.81e-52!45;CL:0002009!2.25e-44!65;CL:0002194!9.11e-42!63;CL:0000576!9.11e-42!63;CL:0000040!9.11e-42!63;CL:0000559!9.11e-42!63;CL:0000557!3.63e-41!71;CL:0000766!1.91e-39!76;CL:0000839!6.96e-38!70;CL:0000738!4.40e-36!140;CL:0002087!2.23e-29!119;CL:0000763!6.14e-28!112;CL:0000049!6.14e-28!112;CL:0002031!2.49e-27!124;CL:0000037!2.62e-26!172;CL:0000566!2.62e-26!172;CL:0000988!1.12e-23!182;CL:0002032!6.89e-22!165;CL:0000837!6.89e-22!165;CL:0002320!1.27e-15!365;CL:0002393!1.36e-15!9;CL:0002397!1.36e-15!9;CL:0000134!2.96e-15!358;CL:0000048!1.20e-14!430;CL:0000723!1.43e-14!436;CL:0000034!8.76e-14!444;CL:0002371!9.81e-13!591;CL:0000219!9.97e-13!390;CL:0000451!3.87e-12!10;CL:0000144!2.89e-11!625;CL:0000548!4.19e-10!679;CL:0000004!4.19e-10!679;CL:0000255!4.19e-10!679;CL:0000012!6.66e-10!682;CL:0000990!7.51e-10!8;CL:0000063!1.42e-09!578;CL:0000453!2.96e-08!5;CL:0000003!2.22e-07!722|ontology_enrichment_celltype_v019=CL:0000860;9.52e-79;33!CL:0002057;9.52e-79;33!CL:0000576;3.79e-65;48!CL:0000473;1.13e-57;39!CL:0000234;1.13e-57;39!CL:0000766;2.41e-44;69!CL:0002393;2.04e-26;6!CL:0002397;2.04e-26;6!CL:0002087;3.82e-18;104!CL:0000763;3.11e-17;100!CL:0000738;7.99e-14;136!CL:0000875;1.76e-13;3!CL:0002396;1.76e-13;3!CL:0000226;2.94e-12;3!CL:0000842;2.94e-12;3!CL:0000988;9.47e-08;177!CL:0000453;1.11e-07;5!CL:0000990;3.58e-07;8!CL:0000767;9.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,3.25e-122,42;CL:0002057,3.25e-122,42;CL:0000473,4.42e-112,48;CL:0000234,4.42e-112,48;CL:0002009,9.01e-95,61;CL:0002194,5.80e-93,59;CL:0000576,5.80e-93,59;CL:0000040,5.80e-93,59;CL:0000559,5.80e-93,59;CL:0000557,1.17e-85,67;CL:0000766,7.70e-84,72;CL:0000839,2.27e-82,66;CL:0000763,1.84e-62,108;CL:0000049,1.84e-62,108;CL:0000738,1.15e-55,136;CL:0002087,4.90e-52,115;CL:0002031,2.24e-44,120;CL:0000037,2.16e-43,168;CL:0000988,9.86e-41,177;CL:0002032,4.37e-39,161;CL:0000837,4.37e-39,161;CL:0002393,2.51e-38,9;CL:0002397,2.51e-38,9;CL:0000134,6.88e-18,354;CL:0002320,2.33e-17,361;CL:0000219,1.72e-15,386;CL:0000048,4.16e-14,427;CL:0000723,8.86e-14,433;CL:0000875,1.18e-13,3;CL:0002396,1.18e-13,3;CL:0000034,2.35e-13,441;CL:0000226,1.68e-12,3;CL:0000842,1.68e-12,3;CL:0000453,8.23e-08,5;CL:0000990,2.80e-07,8|ontology_enrichment_development_v019=CL:0002057;4.21e-87;42!CL:0000049;3.65e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.42e-38!80;UBERON:0001474!3.06e-34!86;UBERON:0002390!1.20e-30!102;UBERON:0003061!1.20e-30!102;UBERON:0004765!1.49e-30!101;UBERON:0001434!1.49e-30!101;UBERON:0002193!1.11e-27!112;UBERON:0002405!1.26e-24!115;UBERON:0002204!1.19e-20!167;UBERON:0003081!1.69e-18!216;UBERON:0002384!1.70e-14!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-74,76;UBERON:0001474,1.24e-68,82;UBERON:0002390,6.75e-66,98;UBERON:0003061,6.75e-66,98;UBERON:0004765,7.63e-62,90;UBERON:0002405,1.35e-59,93;UBERON:0002193,4.87e-59,108;UBERON:0001434,7.19e-55,100;UBERON:0002204,2.56e-31,167;UBERON:0003081,1.14e-30,203;UBERON:0002384,1.23e-16,371;UBERON:0000926,1.57e-16,315;UBERON:0004120,1.57e-16,315;UBERON:0006603,1.57e-16,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,5.11373559903575,0.767658796194425,4.18003532953405,0,0,0,0,0,0.293600439334847,6.64794490238253,5.61524452916397,8.24641308720237,0,0,0,1.16318591023652,0.755751887377619,0.970336244751265,3.71886459049095,2.05583944010913,5.88442104700697,2.3015391385772,1.2808035326455,4.7296445977717,11.721353145045,7.74581620300591,12.1883837934908,2.63539275359647,2.45615535052061,6.06753408001728,6.73384563215986,5.45579346029359,3.19668562899521,0,0.598390972864896,1.27867425159808,3.19230162491442,1.13477044938228,0,0.502497330513487,2.08593167368081,4.56096573880745,2.42159801053347,2.20966581592539,2.21523671208619,4.64761629886272,9.14198489849687,9.85395633889367,1.01095768031846,1.05123824989054,1.12507910687956,5.98526761856622,2.78483348078726,4.93193215164512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903450714466637,0.127986611154418,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0.709336764396714,0.560677600142307,2.1349799145941,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.1793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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C475 | |||
|description=CAGE_peak_at_chr11:10921615..10921626,+ | |||
|id=chr11:10921615..10921626,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.76e-57!42;CL:0000860!3.81e-52!45;CL:0002009!2.25e-44!65;CL:0002194!9.11e-42!63;CL:0000576!9.11e-42!63;CL:0000040!9.11e-42!63;CL:0000559!9.11e-42!63;CL:0000557!3.63e-41!71;CL:0000766!1.91e-39!76;CL:0000839!6.96e-38!70;CL:0000738!4.40e-36!140;CL:0002087!2.23e-29!119;CL:0000763!6.14e-28!112;CL:0000049!6.14e-28!112;CL:0002031!2.49e-27!124;CL:0000037!2.62e-26!172;CL:0000566!2.62e-26!172;CL:0000988!1.12e-23!182;CL:0002032!6.89e-22!165;CL:0000837!6.89e-22!165;CL:0002320!1.27e-15!365;CL:0002393!1.36e-15!9;CL:0002397!1.36e-15!9;CL:0000134!2.96e-15!358;CL:0000048!1.20e-14!430;CL:0000723!1.43e-14!436;CL:0000034!8.76e-14!444;CL:0002371!9.81e-13!591;CL:0000219!9.97e-13!390;CL:0000451!3.87e-12!10;CL:0000144!2.89e-11!625;CL:0000548!4.19e-10!679;CL:0000004!4.19e-10!679;CL:0000255!4.19e-10!679;CL:0000012!6.66e-10!682;CL:0000990!7.51e-10!8;CL:0000063!1.42e-09!578;CL:0000453!2.96e-08!5;CL:0000003!2.22e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.52e-79;33!CL:0002057;9.52e-79;33!CL:0000576;3.79e-65;48!CL:0000473;1.13e-57;39!CL:0000234;1.13e-57;39!CL:0000766;2.41e-44;69!CL:0002393;2.04e-26;6!CL:0002397;2.04e-26;6!CL:0002087;3.82e-18;104!CL:0000763;3.11e-17;100!CL:0000738;7.99e-14;136!CL:0000875;1.76e-13;3!CL:0002396;1.76e-13;3!CL:0000226;2.94e-12;3!CL:0000842;2.94e-12;3!CL:0000988;9.47e-08;177!CL:0000453;1.11e-07;5!CL:0000990;3.58e-07;8!CL:0000767;9.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.25e-122,42;CL:0002057,3.25e-122,42;CL:0000473,4.42e-112,48;CL:0000234,4.42e-112,48;CL:0002009,9.01e-95,61;CL:0002194,5.80e-93,59;CL:0000576,5.80e-93,59;CL:0000040,5.80e-93,59;CL:0000559,5.80e-93,59;CL:0000557,1.17e-85,67;CL:0000766,7.70e-84,72;CL:0000839,2.27e-82,66;CL:0000763,1.84e-62,108;CL:0000049,1.84e-62,108;CL:0000738,1.15e-55,136;CL:0002087,4.90e-52,115;CL:0002031,2.24e-44,120;CL:0000037,2.16e-43,168;CL:0000988,9.86e-41,177;CL:0002032,4.37e-39,161;CL:0000837,4.37e-39,161;CL:0002393,2.51e-38,9;CL:0002397,2.51e-38,9;CL:0000134,6.88e-18,354;CL:0002320,2.33e-17,361;CL:0000219,1.72e-15,386;CL:0000048,4.16e-14,427;CL:0000723,8.86e-14,433;CL:0000875,1.18e-13,3;CL:0002396,1.18e-13,3;CL:0000034,2.35e-13,441;CL:0000226,1.68e-12,3;CL:0000842,1.68e-12,3;CL:0000453,8.23e-08,5;CL:0000990,2.80e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-87;42!CL:0000049;3.65e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.42e-38!80;UBERON:0001474!3.06e-34!86;UBERON:0002390!1.20e-30!102;UBERON:0003061!1.20e-30!102;UBERON:0004765!1.49e-30!101;UBERON:0001434!1.49e-30!101;UBERON:0002193!1.11e-27!112;UBERON:0002405!1.26e-24!115;UBERON:0002204!1.19e-20!167;UBERON:0003081!1.69e-18!216;UBERON:0002384!1.70e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-74,76;UBERON:0001474,1.24e-68,82;UBERON:0002390,6.75e-66,98;UBERON:0003061,6.75e-66,98;UBERON:0004765,7.63e-62,90;UBERON:0002405,1.35e-59,93;UBERON:0002193,4.87e-59,108;UBERON:0001434,7.19e-55,100;UBERON:0002204,2.56e-31,167;UBERON:0003081,1.14e-30,203;UBERON:0002384,1.23e-16,371;UBERON:0000926,1.57e-16,315;UBERON:0004120,1.57e-16,315;UBERON:0006603,1.57e-16,315 | |||
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|short_description=p@chr11:10921615..10921626,+ | |||
}} |
Revision as of 15:35, 10 September 2013
Short description: | p@chr11:10921615..10921626, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:10921615..10921626, + |
Coexpression cluster: | C475_CD14_Basophils_CD14CD16_Peripheral_CD133_large_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-74 | 76 |
bone element | 1.24e-68 | 82 |
hematopoietic system | 6.75e-66 | 98 |
blood island | 6.75e-66 | 98 |
skeletal element | 7.63e-62 | 90 |
immune system | 1.35e-59 | 93 |
hemolymphoid system | 4.87e-59 | 108 |
skeletal system | 7.19e-55 | 100 |
musculoskeletal system | 2.56e-31 | 167 |
lateral plate mesoderm | 1.14e-30 | 203 |
connective tissue | 1.23e-16 | 371 |
mesoderm | 1.57e-16 | 315 |
mesoderm-derived structure | 1.57e-16 | 315 |
presumptive mesoderm | 1.57e-16 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.