FFCP PHASE1:Hg19::chr11:109964098..109964123,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=85463|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29362|TSSclassifier=S|UniProt=Q9C0D7|association_with_transcript=11bp_to_ENST00000278590,NM_033390,uc009yxw.2_5end|coexpression_cluster_id=C6|description=CAGE_peak_12_at_ZC3H12C_5end|id=chr11:109964098..109964123,+|ontology_enrichment_celltype=CL:0002057!2.16e-21!42;CL:0000860!1.44e-20!45;CL:0002009!2.43e-18!65;CL:0002194!3.80e-17!63;CL:0000576!3.80e-17!63;CL:0000040!3.80e-17!63;CL:0000559!3.80e-17!63;CL:0000557!2.35e-16!71;CL:0000766!4.64e-15!76;CL:0000839!1.63e-14!70;CL:0000763!4.20e-11!112;CL:0000049!4.20e-11!112|ontology_enrichment_celltype_v019=CL:0000860;1.54e-33;33!CL:0002057;1.54e-33;33!CL:0000473;2.96e-29;39!CL:0000234;2.96e-29;39!CL:0000576;3.39e-26;48!CL:0002393;4.26e-25;6!CL:0002397;4.26e-25;6!CL:0000766;3.93e-20;69!CL:0002561;3.73e-09;2!CL:0000763;1.13e-08;100!CL:0002087;5.13e-08;104|ontology_enrichment_celltype_v019_2=CL:0000473,3.55e-52,48;CL:0000234,3.55e-52,48;CL:0000860,2.69e-51,42;CL:0002057,2.69e-51,42;CL:0002194,1.95e-40,59;CL:0000576,1.95e-40,59;CL:0000040,1.95e-40,59;CL:0000559,1.95e-40,59;CL:0002009,6.37e-39,61;CL:0000557,8.05e-38,67;CL:0000766,1.27e-37,72;CL:0000839,1.56e-35,66;CL:0000763,8.25e-25,108;CL:0000049,8.25e-25,108;CL:0002087,1.91e-19,115;CL:0000738,2.48e-18,136;CL:0002031,8.12e-17,120;CL:0002393,1.33e-16,9;CL:0002397,1.33e-16,9;CL:0000037,9.62e-15,168;CL:0002032,2.04e-14,161;CL:0000837,2.04e-14,161;CL:0000988,1.22e-13,177;CL:0002561,1.89e-09,2|ontology_enrichment_development_v019=CL:0002057;5.62e-37;42!CL:0000049;1.57e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!5.63e-17!167;UBERON:0002371!3.60e-15!80;UBERON:0004765!8.54e-14!101;UBERON:0001434!8.54e-14!101;UBERON:0001474!8.15e-13!86;UBERON:0002390!1.75e-12!102;UBERON:0003061!1.75e-12!102;UBERON:0002193!3.69e-10!112;UBERON:0002405!9.64e-10!115;UBERON:0003081!3.05e-07!216;UBERON:0000468!7.06e-07!659;UBERON:0000923!8.20e-07!604;UBERON:0005291!8.20e-07!604;UBERON:0006598!8.20e-07!604;UBERON:0002532!8.20e-07!604;UBERON:0000926!8.44e-07!448;UBERON:0004120!8.44e-07!448;UBERON:0006603!8.44e-07!448|ontology_enrichment_uberon_v019=UBERON:0005933;3.73e-09;2!UBERON:0005942;3.73e-09;2!UBERON:0005932;3.73e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.73e-35,76;UBERON:0001474,3.07e-32,82;UBERON:0004765,3.73e-31,90;UBERON:0002390,4.75e-28,98;UBERON:0003061,4.75e-28,98;UBERON:0002405,1.16e-27,93;UBERON:0001434,2.28e-27,100;UBERON:0002193,7.92e-25,108;UBERON:0002204,2.00e-20,167;UBERON:0003081,4.68e-11,203;UBERON:0000926,1.71e-09,315;UBERON:0004120,1.71e-09,315;UBERON:0006603,1.71e-09,315;UBERON:0005933,1.89e-09,2;UBERON:0005942,1.89e-09,2;UBERON:0005932,1.89e-09,2|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.618831764800233,1.65698687863958,0,0,0,0,0,0,0.313454721478088,0,0,0,0.305653622991805,0,0,0.786728553697808,1.15148819429164,1.70297735647684,0,0,0.369754010166788,0,0,0,11.6339035791694,8.82395568868623,6.51032612147556,0,0,0.257575567634187,0,0.755751887377619,0.727752183563449,1.85943229524548,3.28934310417461,1.23882548358041,0,1.7931249457037,1.41889337933151,5.17118521104928,7.74581620300591,1.35426486594342,0.752969358170419,0.545812300115692,0.898893937780338,1.83650335422542,2.56743221660875,3.83602275479425,0,0.598390972864896,0.426224750532694,1.7412554317715,2.8369261234557,2.4912889959823,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,4.41933163185078,3.48108626184973,1.69004229049553,1.4882300997553,2.30624510059213,1.01095768031846,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,1.63723844372141,0,0,0,0.348259474598534,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.286836620748814,0,0,0,0,0.933633106199299,0.404132016209064,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.88751792667834,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0.29726232457745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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=85463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29362 | |||
|TSSclassifier=S | |||
|UniProt=Q9C0D7 | |||
|association_with_transcript=11bp_to_ENST00000278590,NM_033390,uc009yxw.2_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_12_at_ZC3H12C_5end | |||
|id=chr11:109964098..109964123,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.16e-21!42;CL:0000860!1.44e-20!45;CL:0002009!2.43e-18!65;CL:0002194!3.80e-17!63;CL:0000576!3.80e-17!63;CL:0000040!3.80e-17!63;CL:0000559!3.80e-17!63;CL:0000557!2.35e-16!71;CL:0000766!4.64e-15!76;CL:0000839!1.63e-14!70;CL:0000763!4.20e-11!112;CL:0000049!4.20e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-33;33!CL:0002057;1.54e-33;33!CL:0000473;2.96e-29;39!CL:0000234;2.96e-29;39!CL:0000576;3.39e-26;48!CL:0002393;4.26e-25;6!CL:0002397;4.26e-25;6!CL:0000766;3.93e-20;69!CL:0002561;3.73e-09;2!CL:0000763;1.13e-08;100!CL:0002087;5.13e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.55e-52,48;CL:0000234,3.55e-52,48;CL:0000860,2.69e-51,42;CL:0002057,2.69e-51,42;CL:0002194,1.95e-40,59;CL:0000576,1.95e-40,59;CL:0000040,1.95e-40,59;CL:0000559,1.95e-40,59;CL:0002009,6.37e-39,61;CL:0000557,8.05e-38,67;CL:0000766,1.27e-37,72;CL:0000839,1.56e-35,66;CL:0000763,8.25e-25,108;CL:0000049,8.25e-25,108;CL:0002087,1.91e-19,115;CL:0000738,2.48e-18,136;CL:0002031,8.12e-17,120;CL:0002393,1.33e-16,9;CL:0002397,1.33e-16,9;CL:0000037,9.62e-15,168;CL:0002032,2.04e-14,161;CL:0000837,2.04e-14,161;CL:0000988,1.22e-13,177;CL:0002561,1.89e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.62e-37;42!CL:0000049;1.57e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.63e-17!167;UBERON:0002371!3.60e-15!80;UBERON:0004765!8.54e-14!101;UBERON:0001434!8.54e-14!101;UBERON:0001474!8.15e-13!86;UBERON:0002390!1.75e-12!102;UBERON:0003061!1.75e-12!102;UBERON:0002193!3.69e-10!112;UBERON:0002405!9.64e-10!115;UBERON:0003081!3.05e-07!216;UBERON:0000468!7.06e-07!659;UBERON:0000923!8.20e-07!604;UBERON:0005291!8.20e-07!604;UBERON:0006598!8.20e-07!604;UBERON:0002532!8.20e-07!604;UBERON:0000926!8.44e-07!448;UBERON:0004120!8.44e-07!448;UBERON:0006603!8.44e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;3.73e-09;2!UBERON:0005942;3.73e-09;2!UBERON:0005932;3.73e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.73e-35,76;UBERON:0001474,3.07e-32,82;UBERON:0004765,3.73e-31,90;UBERON:0002390,4.75e-28,98;UBERON:0003061,4.75e-28,98;UBERON:0002405,1.16e-27,93;UBERON:0001434,2.28e-27,100;UBERON:0002193,7.92e-25,108;UBERON:0002204,2.00e-20,167;UBERON:0003081,4.68e-11,203;UBERON:0000926,1.71e-09,315;UBERON:0004120,1.71e-09,315;UBERON:0006603,1.71e-09,315;UBERON:0005933,1.89e-09,2;UBERON:0005942,1.89e-09,2;UBERON:0005932,1.89e-09,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.618831764800233,1.65698687863958,0,0,0,0,0,0,0.313454721478088,0,0,0,0.305653622991805,0,0,0.786728553697808,1.15148819429164,1.70297735647684,0,0,0.369754010166788,0,0,0,11.6339035791694,8.82395568868623,6.51032612147556,0,0,0.257575567634187,0,0.755751887377619,0.727752183563449,1.85943229524548,3.28934310417461,1.23882548358041,0,1.7931249457037,1.41889337933151,5.17118521104928,7.74581620300591,1.35426486594342,0.752969358170419,0.545812300115692,0.898893937780338,1.83650335422542,2.56743221660875,3.83602275479425,0,0.598390972864896,0.426224750532694,1.7412554317715,2.8369261234557,2.4912889959823,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,4.41933163185078,3.48108626184973,1.69004229049553,1.4882300997553,2.30624510059213,1.01095768031846,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,1.63723844372141,0,0,0,0.348259474598534,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.286836620748814,0,0,0,0,0.933633106199299,0.404132016209064,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.88751792667834,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0.297262324577456,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.499864955910285,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0.61642896765115,0.358121926479791,0,0.591092280605782,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0.49076596687656,0.500170521059677,0.542530047399471,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.413536052245775,0.862856803274467,1.49418580924822,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.770243085573222,1.22802939780904,0.137836572484531,4.29680979473094,1.74020032697074,0.340906509664404,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0.190630193923825,0,0.855877976067841,0.636406495851874,0,0,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0.876901770507525,0,1.31178950409327,0.202910376962704,0.30982349809975,0,0.430234056612155,0.196498082026242,0,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0,0.890894042497916,0,0.994147647766298,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0,0,0,0,0,0.153900517007594,1.02547850262301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0,0.163232808159148,0,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.404406797884062,0,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,1.59045937961861,0,0,0,0,0.674921674654501,0.77380195455795,0.121499113316049,0,0.157611414598396,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0.244052529803926,0.1251909307065,0,0.1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| |||
|short_description=p12@ZC3H12C | |||
}} |
Revision as of 15:37, 10 September 2013
Short description: | p12@ZC3H12C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ZC3H12C_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 11bp_to_ENST00000278590, NM_033390, uc009yxw.2_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | Q9C0D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.55e-52 | 48 |
phagocyte | 3.55e-52 | 48 |
classical monocyte | 2.69e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-51 | 42 |
monopoietic cell | 1.95e-40 | 59 |
monocyte | 1.95e-40 | 59 |
monoblast | 1.95e-40 | 59 |
promonocyte | 1.95e-40 | 59 |
macrophage dendritic cell progenitor | 6.37e-39 | 61 |
granulocyte monocyte progenitor cell | 8.05e-38 | 67 |
myeloid leukocyte | 1.27e-37 | 72 |
myeloid lineage restricted progenitor cell | 1.56e-35 | 66 |
myeloid cell | 8.25e-25 | 108 |
common myeloid progenitor | 8.25e-25 | 108 |
nongranular leukocyte | 1.91e-19 | 115 |
leukocyte | 2.48e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 8.12e-17 | 120 |
intermediate monocyte | 1.33e-16 | 9 |
CD14-positive, CD16-positive monocyte | 1.33e-16 | 9 |
hematopoietic stem cell | 9.62e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.04e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-14 | 161 |
hematopoietic cell | 1.22e-13 | 177 |
outer root sheath cell | 1.89e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.73e-35 | 76 |
bone element | 3.07e-32 | 82 |
skeletal element | 3.73e-31 | 90 |
hematopoietic system | 4.75e-28 | 98 |
blood island | 4.75e-28 | 98 |
immune system | 1.16e-27 | 93 |
skeletal system | 2.28e-27 | 100 |
hemolymphoid system | 7.92e-25 | 108 |
musculoskeletal system | 2.00e-20 | 167 |
lateral plate mesoderm | 4.68e-11 | 203 |
mesoderm | 1.71e-09 | 315 |
mesoderm-derived structure | 1.71e-09 | 315 |
presumptive mesoderm | 1.71e-09 | 315 |
hair root sheath | 1.89e-09 | 2 |
hair outer root sheath | 1.89e-09 | 2 |
bulb of hair follicle | 1.89e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.