FFCP PHASE1:Hg19::chr12:6248326..6248349,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C450|description=CAGE_peak_at_chr12:6248326..6248349,+|id=chr12:6248326..6248349,+|ontology_enrichment_celltype=CL:0000766!3.21e-80!76;CL:0002057!5.90e-76!42;CL:0000860!5.14e-70!45;CL:0000557!7.48e-64!71;CL:0000839!4.33e-62!70;CL:0002009!4.91e-62!65;CL:0002194!1.97e-61!63;CL:0000576!1.97e-61!63;CL:0000040!1.97e-61!63;CL:0000559!1.97e-61!63;CL:0000738!2.66e-53!140;CL:0000763!3.68e-53!112;CL:0000049!3.68e-53!112;CL:0000037!2.41e-41!172;CL:0000566!2.41e-41!172;CL:0000988!4.83e-38!182;CL:0002087!7.42e-37!119;CL:0002031!2.78e-36!124;CL:0002032!5.47e-36!165;CL:0000837!5.47e-36!165;CL:0002393!4.64e-20!9;CL:0002397!4.64e-20!9;CL:0000094!8.42e-18!8;CL:0000081!1.85e-12!11;CL:0000134!1.16e-11!358;CL:0000219!1.93e-11!390;CL:0002320!4.19e-11!365;CL:0000767!1.37e-07!3;CL:0000875!1.63e-07!3;CL:0002396!1.63e-07!3;CL:0000775!1.70e-07!3;CL:0000842!3.10e-07!3;CL:0000048!6.58e-07!430;CL:0000784!9.29e-07!3|ontology_enrichment_celltype_v019=CL:0000860;9.40e-61;33!CL:0002057;9.40e-61;33!CL:0000576;2.02e-55;48!CL:0000473;4.13e-48;39!CL:0000234;4.13e-48;39!CL:0000766;9.54e-47;69!CL:0002393;8.73e-26;6!CL:0002397;8.73e-26;6!CL:0000094;9.31e-26;8!CL:0000081;1.84e-18;11!CL:0000763;3.55e-18;100!CL:0000767;3.11e-13;3!CL:0002087;3.45e-13;104!CL:0000875;6.69e-13;3!CL:0002396;6.69e-13;3!CL:0000738;4.27e-12;136!CL:0000771;3.35e-10;2!CL:0000988;4.41e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,2.82e-101,42;CL:0002057,2.82e-101,42;CL:0000766,8.17e-98,72;CL:0000473,4.52e-93,48;CL:0000234,4.52e-93,48;CL:0000557,9.13e-76,67;CL:0002009,1.40e-74,61;CL:0002194,7.04e-73,59;CL:0000576,7.04e-73,59;CL:0000040,7.04e-73,59;CL:0000559,7.04e-73,59;CL:0000839,8.57e-73,66;CL:0000763,1.03e-65,108;CL:0000049,1.03e-65,108;CL:0000738,1.74e-58,136;CL:0000037,1.13e-45,168;CL:0000988,6.72e-43,177;CL:0002032,2.96e-41,161;CL:0000837,2.96e-41,161;CL:0002031,6.35e-39,120;CL:0002087,1.44e-38,115;CL:0002393,4.13e-37,9;CL:0002397,4.13e-37,9;CL:0000094,1.06e-25,8;CL:0000081,2.02e-18,11;CL:0000134,7.73e-17,354;CL:0002320,2.50e-16,361;CL:0000219,1.71e-15,386;CL:0000767,3.99e-13,3;CL:0000875,5.56e-13,3;CL:0002396,5.56e-13,3;CL:0000048,2.47e-12,427;CL:0000723,4.97e-12,433;CL:0000034,1.23e-11,441;CL:0000771,3.36e-10,2|ontology_enrichment_development_v019=CL:0002057;2.99e-72;42!CL:0000049;9.13e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.37e-56!102;UBERON:0003061!2.37e-56!102;UBERON:0002371!4.96e-55!80;UBERON:0002193!1.11e-51!112;UBERON:0001474!3.60e-50!86;UBERON:0004765!1.53e-40!101;UBERON:0001434!1.53e-40!101;UBERON:0002405!2.02e-38!115;UBERON:0003081!9.13e-20!216;UBERON:0002204!7.34e-19!167;UBERON:0002384!2.39e-10!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.14e-66,76;UBERON:0001474,1.43e-60,82;UBERON:0002390,1.35e-58,98;UBERON:0003061,1.35e-58,98;UBERON:0004765,1.64e-54,90;UBERON:0002405,1.66e-52,93;UBERON:0002193,2.00e-52,108;UBERON:0001434,2.74e-48,100;UBERON:0002204,1.08e-25,167;UBERON:0003081,6.12e-24,203;UBERON:0002384,1.24e-15,371;UBERON:0000926,2.41e-12,315;UBERON:0004120,2.41e-12,315;UBERON:0006603,2.41e-12,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5876568591649,11.5148819429164,1.08371286321253,0,0,0,0,0,0,4.9859586767869,13.0353890855592,10.8505435357926,0.895661896959697,0.32389366601898,0.77272670290256,2.61716829803216,1.88937971844405,3.39617685662943,6.50801303335917,4.93401465626191,18.5823822537062,3.16461631554365,0.256160706529101,3.31075121844019,14.1345729102014,11.6187243045089,24.3767675869815,4.51781614902251,1.91034305040492,6.29225756446237,4.28517449319264,0.641858054152187,3.19668562899521,0.329851300186716,0.199463657621632,0.852449501065388,2.03146467040009,0,0,8.54245461872927,2.08593167368081,14.1172749058326,0.605399502633369,0.736555271975129,4.43047342417238,13.3090830376523,11.9058407980424,17.6113262227036,11.794506270382,13.065389677211,11.7329678288868,4.84521664360123,3.9783335439818,4.74926799788048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,27.1446184903828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,0,0,2.69526550203004,0.144119953416961,5.0496973370552,0.698476837213859,0,1.17217447210047,0,0.102827492703324,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0.1429779936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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C450 | |||
|description=CAGE_peak_at_chr12:6248326..6248349,+ | |||
|id=chr12:6248326..6248349,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.21e-80!76;CL:0002057!5.90e-76!42;CL:0000860!5.14e-70!45;CL:0000557!7.48e-64!71;CL:0000839!4.33e-62!70;CL:0002009!4.91e-62!65;CL:0002194!1.97e-61!63;CL:0000576!1.97e-61!63;CL:0000040!1.97e-61!63;CL:0000559!1.97e-61!63;CL:0000738!2.66e-53!140;CL:0000763!3.68e-53!112;CL:0000049!3.68e-53!112;CL:0000037!2.41e-41!172;CL:0000566!2.41e-41!172;CL:0000988!4.83e-38!182;CL:0002087!7.42e-37!119;CL:0002031!2.78e-36!124;CL:0002032!5.47e-36!165;CL:0000837!5.47e-36!165;CL:0002393!4.64e-20!9;CL:0002397!4.64e-20!9;CL:0000094!8.42e-18!8;CL:0000081!1.85e-12!11;CL:0000134!1.16e-11!358;CL:0000219!1.93e-11!390;CL:0002320!4.19e-11!365;CL:0000767!1.37e-07!3;CL:0000875!1.63e-07!3;CL:0002396!1.63e-07!3;CL:0000775!1.70e-07!3;CL:0000842!3.10e-07!3;CL:0000048!6.58e-07!430;CL:0000784!9.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.40e-61;33!CL:0002057;9.40e-61;33!CL:0000576;2.02e-55;48!CL:0000473;4.13e-48;39!CL:0000234;4.13e-48;39!CL:0000766;9.54e-47;69!CL:0002393;8.73e-26;6!CL:0002397;8.73e-26;6!CL:0000094;9.31e-26;8!CL:0000081;1.84e-18;11!CL:0000763;3.55e-18;100!CL:0000767;3.11e-13;3!CL:0002087;3.45e-13;104!CL:0000875;6.69e-13;3!CL:0002396;6.69e-13;3!CL:0000738;4.27e-12;136!CL:0000771;3.35e-10;2!CL:0000988;4.41e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.82e-101,42;CL:0002057,2.82e-101,42;CL:0000766,8.17e-98,72;CL:0000473,4.52e-93,48;CL:0000234,4.52e-93,48;CL:0000557,9.13e-76,67;CL:0002009,1.40e-74,61;CL:0002194,7.04e-73,59;CL:0000576,7.04e-73,59;CL:0000040,7.04e-73,59;CL:0000559,7.04e-73,59;CL:0000839,8.57e-73,66;CL:0000763,1.03e-65,108;CL:0000049,1.03e-65,108;CL:0000738,1.74e-58,136;CL:0000037,1.13e-45,168;CL:0000988,6.72e-43,177;CL:0002032,2.96e-41,161;CL:0000837,2.96e-41,161;CL:0002031,6.35e-39,120;CL:0002087,1.44e-38,115;CL:0002393,4.13e-37,9;CL:0002397,4.13e-37,9;CL:0000094,1.06e-25,8;CL:0000081,2.02e-18,11;CL:0000134,7.73e-17,354;CL:0002320,2.50e-16,361;CL:0000219,1.71e-15,386;CL:0000767,3.99e-13,3;CL:0000875,5.56e-13,3;CL:0002396,5.56e-13,3;CL:0000048,2.47e-12,427;CL:0000723,4.97e-12,433;CL:0000034,1.23e-11,441;CL:0000771,3.36e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.99e-72;42!CL:0000049;9.13e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-56!102;UBERON:0003061!2.37e-56!102;UBERON:0002371!4.96e-55!80;UBERON:0002193!1.11e-51!112;UBERON:0001474!3.60e-50!86;UBERON:0004765!1.53e-40!101;UBERON:0001434!1.53e-40!101;UBERON:0002405!2.02e-38!115;UBERON:0003081!9.13e-20!216;UBERON:0002204!7.34e-19!167;UBERON:0002384!2.39e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.14e-66,76;UBERON:0001474,1.43e-60,82;UBERON:0002390,1.35e-58,98;UBERON:0003061,1.35e-58,98;UBERON:0004765,1.64e-54,90;UBERON:0002405,1.66e-52,93;UBERON:0002193,2.00e-52,108;UBERON:0001434,2.74e-48,100;UBERON:0002204,1.08e-25,167;UBERON:0003081,6.12e-24,203;UBERON:0002384,1.24e-15,371;UBERON:0000926,2.41e-12,315;UBERON:0004120,2.41e-12,315;UBERON:0006603,2.41e-12,315 | |||
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|short_description=p@chr12:6248326..6248349,+ | |||
}} |
Revision as of 23:48, 10 September 2013
Short description: | p@chr12:6248326..6248349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:6248326..6248349, + |
Coexpression cluster: | C450_Eosinophils_Basophils_CD14_Neutrophils_CD14CD16_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.14e-66 | 76 |
bone element | 1.43e-60 | 82 |
hematopoietic system | 1.35e-58 | 98 |
blood island | 1.35e-58 | 98 |
skeletal element | 1.64e-54 | 90 |
immune system | 1.66e-52 | 93 |
hemolymphoid system | 2.00e-52 | 108 |
skeletal system | 2.74e-48 | 100 |
musculoskeletal system | 1.08e-25 | 167 |
lateral plate mesoderm | 6.12e-24 | 203 |
connective tissue | 1.24e-15 | 371 |
mesoderm | 2.41e-12 | 315 |
mesoderm-derived structure | 2.41e-12 | 315 |
presumptive mesoderm | 2.41e-12 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.