FFCP PHASE1:Hg19::chr12:6484832..6484841,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:6484832..6484841,+|id=chr12:6484832..6484841,+|ontology_enrichment_celltype=CL:0000239!1.01e-11!3;CL:1000615!1.01e-11!3;CL:0002306!1.01e-11!3;CL:0000083!1.08e-08!4;CL:0000223!3.63e-08!59;CL:0002536!4.96e-08!2;CL:0000066!2.21e-07!254;CL:0002076!2.81e-07!43|ontology_enrichment_celltype_v019=CL:0000239;3.66e-23;3!CL:1000615;3.66e-23;3!CL:0002306;3.66e-23;3!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:1000507;6.34e-08;10!CL:1000494;6.34e-08;10!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12|ontology_enrichment_celltype_v019_2=CL:0000239,3.27e-23,3;CL:1000615,3.27e-23,3;CL:0002306,3.27e-23,3;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7;CL:1000507,6.13e-08,10;CL:1000494,6.13e-08,10;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10|ontology_enrichment_disease=DOID:305!4.14e-09!106;DOID:1793!1.08e-08!4;DOID:4074!2.92e-08!2;DOID:4905!2.92e-08!2;DOID:3498!2.92e-08!2;DOID:1749!3.42e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006853!1.01e-11!3;UBERON:0007685!1.01e-11!3;UBERON:0004134!1.01e-11!3;UBERON:0003127!1.34e-07!2;UBERON:0001007!2.07e-07!155;UBERON:0001555!2.07e-07!155;UBERON:0007026!2.07e-07!155;UBERON:0000464!2.22e-07!104;UBERON:0004921!3.11e-07!129;UBERON:0004185!3.11e-07!129;UBERON:0004119!4.12e-07!169;UBERON:0000925!4.12e-07!169;UBERON:0006595!4.12e-07!169|ontology_enrichment_uberon_v019=UBERON:0006853;3.66e-23;3!UBERON:0007685;3.66e-23;3!UBERON:0004134;3.66e-23;3!UBERON:0000473;1.24e-09;8!UBERON:0004211;6.34e-08;10!UBERON:0009773;6.34e-08;10!UBERON:0001231;6.34e-08;10!UBERON:0004810;6.34e-08;10!UBERON:0003135;2.32e-07;11!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.27e-23,3;UBERON:0007685,3.27e-23,3;UBERON:0004134,3.27e-23,3;UBERON:0000473,1.24e-09,8;UBERON:0004810,6.13e-08,10;UBERON:0003135,2.32e-07,11;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0.242780379534093,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687697182986169,0.415440338029185,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,3.12442658418473,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:6484832..6484841,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:6484832..6484841,+ | |||
|id=chr12:6484832..6484841,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.01e-11!3;CL:1000615!1.01e-11!3;CL:0002306!1.01e-11!3;CL:0000083!1.08e-08!4;CL:0000223!3.63e-08!59;CL:0002536!4.96e-08!2;CL:0000066!2.21e-07!254;CL:0002076!2.81e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000239;3.66e-23;3!CL:1000615;3.66e-23;3!CL:0002306;3.66e-23;3!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:1000507;6.34e-08;10!CL:1000494;6.34e-08;10!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.27e-23,3;CL:1000615,3.27e-23,3;CL:0002306,3.27e-23,3;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7;CL:1000507,6.13e-08,10;CL:1000494,6.13e-08,10;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:305!4.14e-09!106;DOID:1793!1.08e-08!4;DOID:4074!2.92e-08!2;DOID:4905!2.92e-08!2;DOID:3498!2.92e-08!2;DOID:1749!3.42e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006853!1.01e-11!3;UBERON:0007685!1.01e-11!3;UBERON:0004134!1.01e-11!3;UBERON:0003127!1.34e-07!2;UBERON:0001007!2.07e-07!155;UBERON:0001555!2.07e-07!155;UBERON:0007026!2.07e-07!155;UBERON:0000464!2.22e-07!104;UBERON:0004921!3.11e-07!129;UBERON:0004185!3.11e-07!129;UBERON:0004119!4.12e-07!169;UBERON:0000925!4.12e-07!169;UBERON:0006595!4.12e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.66e-23;3!UBERON:0007685;3.66e-23;3!UBERON:0004134;3.66e-23;3!UBERON:0000473;1.24e-09;8!UBERON:0004211;6.34e-08;10!UBERON:0009773;6.34e-08;10!UBERON:0001231;6.34e-08;10!UBERON:0004810;6.34e-08;10!UBERON:0003135;2.32e-07;11!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.27e-23,3;UBERON:0007685,3.27e-23,3;UBERON:0004134,3.27e-23,3;UBERON:0000473,1.24e-09,8;UBERON:0004810,6.13e-08,10;UBERON:0003135,2.32e-07,11;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0.242780379534093,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687697182986169,0.415440338029185,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,3.12442658418473,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:6484832..6484841,+ | |||
}} |
Revision as of 23:54, 10 September 2013
Short description: | p@chr12:6484832..6484841, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:6484832..6484841, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.27e-23 | 3 |
kidney cortex tubule cell | 3.27e-23 | 3 |
epithelial cell of proximal tubule | 3.27e-23 | 3 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
kidney tubule cell | 6.13e-08 | 10 |
nephron tubule epithelial cell | 6.13e-08 | 10 |
kidney cortical cell | 7.92e-07 | 12 |
renal cortical epithelial cell | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.27e-23 | 3 |
region of nephron tubule | 3.27e-23 | 3 |
proximal tubule | 3.27e-23 | 3 |
testis | 1.24e-09 | 8 |
nephron tubule epithelium | 6.13e-08 | 10 |
male reproductive organ | 2.32e-07 | 11 |
cortex of kidney | 7.92e-07 | 12 |
renal parenchyma | 7.92e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.