FFCP PHASE1:Hg19::chr14:61654180..61654191,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5583|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9403|TSSclassifier=S|UniProt=G3V4L3|association_with_transcript=-85bp_to_ENST00000555185_5end|coexpression_cluster_id=C3439|description=CAGE_peak_33_at_PRKCH_5end|id=chr14:61654180..61654191,+|ontology_enrichment_celltype=CL:0000064!9.16e-21!3;CL:0005012!9.16e-21!3;CL:0000067!9.16e-21!3;CL:0002304!9.16e-21!3;CL:0000708!4.63e-20!3;CL:0002575!8.65e-14!2;CL:0002590!1.04e-09!3;CL:0002504!3.12e-09!3;CL:1000279!3.12e-09!3;CL:1000280!3.12e-09!3;CL:0000075!4.63e-08!27;CL:0000342!7.26e-08!1;CL:0002565!7.26e-08!1;CL:0000306!3.28e-07!4;CL:0002222!3.28e-07!4;CL:0002224!3.28e-07!4|ontology_enrichment_celltype_v019=CL:0000064;4.06e-99;3!CL:0000067;4.06e-99;3!CL:0005012;4.06e-99;3!CL:0002304;4.06e-99;3!CL:0000710;1.06e-15;20!CL:0000708;2.89e-12;3!CL:0002590;2.89e-12;3!CL:0000075;7.71e-12;27!CL:0002077;1.16e-09;34|ontology_enrichment_celltype_v019_2=CL:0000064,4.06e-99,3;CL:0000067,4.06e-99,3;CL:0005012,4.06e-99,3;CL:0002304,4.06e-99,3;CL:0000710,1.06e-15,20;CL:0002590,2.89e-12,3;CL:0000708,3.24e-12,3;CL:0000075,7.72e-12,27;CL:0002077,1.48e-09,34|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002200!1.56e-28!11;UBERON:0006876!1.56e-28!11;UBERON:0000488!6.98e-27!4;UBERON:0007625!7.17e-21!11;UBERON:0001778!9.16e-21!3;UBERON:0001775!9.16e-21!3;UBERON:0003210!4.63e-20!3;UBERON:0002203!5.44e-18!6;UBERON:0001768!5.44e-18!6;UBERON:0001801!2.76e-16!14;UBERON:0000019!8.96e-16!19;UBERON:0000047!8.96e-16!19;UBERON:0004088!8.96e-16!19;UBERON:0003072!8.96e-16!19;UBERON:0003071!8.96e-16!19;UBERON:0004128!8.96e-16!19;UBERON:0000970!6.08e-15!20;UBERON:0002104!3.44e-14!21;UBERON:0001456!3.44e-14!21;UBERON:0000020!7.02e-13!23;UBERON:0005284!2.45e-12!5;UBERON:0001032!2.63e-12!24;UBERON:0004456!2.63e-12!24;UBERON:0005085!4.93e-10!29;UBERON:0002506!7.26e-08!1;UBERON:0001769!7.26e-08!1;UBERON:0002363!1.91e-07!1;UBERON:0007647!1.91e-07!1;UBERON:0010115!1.91e-07!1;UBERON:0010077!3.28e-07!4;UBERON:0005389!3.28e-07!4;UBERON:0000484!3.28e-07!4;UBERON:0002546!3.28e-07!4;UBERON:0000965!3.28e-07!4;UBERON:0001803!3.28e-07!4;UBERON:0003073!3.28e-07!4;UBERON:0005426!3.28e-07!4|ontology_enrichment_uberon_v019=UBERON:0001778;4.06e-99;3!UBERON:0001775;4.06e-99;3!UBERON:0000488;1.21e-74;4!UBERON:0002203;3.84e-50;6!UBERON:0001768;3.84e-50;6!UBERON:0002200;3.84e-50;6!UBERON:0006876;2.54e-48;11!UBERON:0007625;8.12e-28;11!UBERON:0001801;4.67e-22;14!UBERON:0000019;1.75e-16;19!UBERON:0000047;1.75e-16;19!UBERON:0004088;1.75e-16;19!UBERON:0010230;1.75e-16;19!UBERON:0000970;1.06e-15;20!UBERON:0002104;5.40e-15;21!UBERON:0001456;5.40e-15;21!UBERON:0000020;9.23e-14;23!UBERON:0001032;3.20e-13;24!UBERON:0004456;3.20e-13;24!UBERON:0003210;2.89e-12;3!UBERON:0010371;3.39e-10;31!UBERON:0005284;7.01e-08;5!UBERON:0002049;7.98e-08;75!UBERON:0007798;7.98e-08;75|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.06e-99,3;UBERON:0001775,4.06e-99,3;UBERON:0000488,1.21e-74,4;UBERON:0002203,3.84e-50,6;UBERON:0001768,3.84e-50,6;UBERON:0002200,3.84e-50,6;UBERON:0006876,2.54e-48,11;UBERON:0007625,8.12e-28,11;UBERON:0001801,4.67e-22,14;UBERON:0000019,1.06e-15,20;UBERON:0000047,1.06e-15,20;UBERON:0010312,1.06e-15,20;UBERON:0004088,1.06e-15,20;UBERON:0010230,1.06e-15,20;UBERON:0003072,1.06e-15,20;UBERON:0004128,1.06e-15,20;UBERON:0003071,1.06e-15,20;UBERON:0000970,5.40e-15,21;UBERON:0002104,5.40e-15,21;UBERON:0001456,2.38e-14,22;UBERON:0000020,3.20e-13,24;UBERON:0001032,3.20e-13,24;UBERON:0004456,3.20e-13,24;UBERON:0003210,3.24e-12,3;UBERON:0005085,2.08e-10,31;UBERON:0005284,7.01e-08,5;UBERON:0002049,2.39e-07,78;UBERON:0007798,2.39e-07,78;UBERON:0001444,7.75e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0103453096956,5.76496433402666,4.21606971327005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,1.0267360014933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.632758849437452,0,0,0.855877976067841,0,0,0.359744915166629,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |||
|TSSclassifier=S | |||
|UniProt=G3V4L3 | |||
|association_with_transcript=-85bp_to_ENST00000555185_5end | |||
|coexpression_cluster_id=C3439 | |||
|description=CAGE_peak_33_at_PRKCH_5end | |||
|id=chr14:61654180..61654191,+ | |||
|ontology_enrichment_celltype=CL:0000064!9.16e-21!3;CL:0005012!9.16e-21!3;CL:0000067!9.16e-21!3;CL:0002304!9.16e-21!3;CL:0000708!4.63e-20!3;CL:0002575!8.65e-14!2;CL:0002590!1.04e-09!3;CL:0002504!3.12e-09!3;CL:1000279!3.12e-09!3;CL:1000280!3.12e-09!3;CL:0000075!4.63e-08!27;CL:0000342!7.26e-08!1;CL:0002565!7.26e-08!1;CL:0000306!3.28e-07!4;CL:0002222!3.28e-07!4;CL:0002224!3.28e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.06e-99;3!CL:0000067;4.06e-99;3!CL:0005012;4.06e-99;3!CL:0002304;4.06e-99;3!CL:0000710;1.06e-15;20!CL:0000708;2.89e-12;3!CL:0002590;2.89e-12;3!CL:0000075;7.71e-12;27!CL:0002077;1.16e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.06e-99,3;CL:0000067,4.06e-99,3;CL:0005012,4.06e-99,3;CL:0002304,4.06e-99,3;CL:0000710,1.06e-15,20;CL:0002590,2.89e-12,3;CL:0000708,3.24e-12,3;CL:0000075,7.72e-12,27;CL:0002077,1.48e-09,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!1.56e-28!11;UBERON:0006876!1.56e-28!11;UBERON:0000488!6.98e-27!4;UBERON:0007625!7.17e-21!11;UBERON:0001778!9.16e-21!3;UBERON:0001775!9.16e-21!3;UBERON:0003210!4.63e-20!3;UBERON:0002203!5.44e-18!6;UBERON:0001768!5.44e-18!6;UBERON:0001801!2.76e-16!14;UBERON:0000019!8.96e-16!19;UBERON:0000047!8.96e-16!19;UBERON:0004088!8.96e-16!19;UBERON:0003072!8.96e-16!19;UBERON:0003071!8.96e-16!19;UBERON:0004128!8.96e-16!19;UBERON:0000970!6.08e-15!20;UBERON:0002104!3.44e-14!21;UBERON:0001456!3.44e-14!21;UBERON:0000020!7.02e-13!23;UBERON:0005284!2.45e-12!5;UBERON:0001032!2.63e-12!24;UBERON:0004456!2.63e-12!24;UBERON:0005085!4.93e-10!29;UBERON:0002506!7.26e-08!1;UBERON:0001769!7.26e-08!1;UBERON:0002363!1.91e-07!1;UBERON:0007647!1.91e-07!1;UBERON:0010115!1.91e-07!1;UBERON:0010077!3.28e-07!4;UBERON:0005389!3.28e-07!4;UBERON:0000484!3.28e-07!4;UBERON:0002546!3.28e-07!4;UBERON:0000965!3.28e-07!4;UBERON:0001803!3.28e-07!4;UBERON:0003073!3.28e-07!4;UBERON:0005426!3.28e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.06e-99;3!UBERON:0001775;4.06e-99;3!UBERON:0000488;1.21e-74;4!UBERON:0002203;3.84e-50;6!UBERON:0001768;3.84e-50;6!UBERON:0002200;3.84e-50;6!UBERON:0006876;2.54e-48;11!UBERON:0007625;8.12e-28;11!UBERON:0001801;4.67e-22;14!UBERON:0000019;1.75e-16;19!UBERON:0000047;1.75e-16;19!UBERON:0004088;1.75e-16;19!UBERON:0010230;1.75e-16;19!UBERON:0000970;1.06e-15;20!UBERON:0002104;5.40e-15;21!UBERON:0001456;5.40e-15;21!UBERON:0000020;9.23e-14;23!UBERON:0001032;3.20e-13;24!UBERON:0004456;3.20e-13;24!UBERON:0003210;2.89e-12;3!UBERON:0010371;3.39e-10;31!UBERON:0005284;7.01e-08;5!UBERON:0002049;7.98e-08;75!UBERON:0007798;7.98e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.06e-99,3;UBERON:0001775,4.06e-99,3;UBERON:0000488,1.21e-74,4;UBERON:0002203,3.84e-50,6;UBERON:0001768,3.84e-50,6;UBERON:0002200,3.84e-50,6;UBERON:0006876,2.54e-48,11;UBERON:0007625,8.12e-28,11;UBERON:0001801,4.67e-22,14;UBERON:0000019,1.06e-15,20;UBERON:0000047,1.06e-15,20;UBERON:0010312,1.06e-15,20;UBERON:0004088,1.06e-15,20;UBERON:0010230,1.06e-15,20;UBERON:0003072,1.06e-15,20;UBERON:0004128,1.06e-15,20;UBERON:0003071,1.06e-15,20;UBERON:0000970,5.40e-15,21;UBERON:0002104,5.40e-15,21;UBERON:0001456,2.38e-14,22;UBERON:0000020,3.20e-13,24;UBERON:0001032,3.20e-13,24;UBERON:0004456,3.20e-13,24;UBERON:0003210,3.24e-12,3;UBERON:0005085,2.08e-10,31;UBERON:0005284,7.01e-08,5;UBERON:0002049,2.39e-07,78;UBERON:0007798,2.39e-07,78;UBERON:0001444,7.75e-07,49 | |||
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|short_description=p33@PRKCH | |||
}} |
Revision as of 04:59, 11 September 2013
Short description: | p33@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_PRKCH_5end |
Coexpression cluster: | C3439_Ciliary_Lens_teratocarcinoma_liposarcoma_renal_Iris_clear |
Association with transcript: | -85bp_to_ENST00000555185_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | G3V4L3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.06e-99 | 3 |
ciliated epithelial cell | 4.06e-99 | 3 |
multi-ciliated epithelial cell | 4.06e-99 | 3 |
non-pigmented ciliary epithelial cell | 4.06e-99 | 3 |
neurecto-epithelial cell | 1.06e-15 | 20 |
smooth muscle cell of the brain vasculature | 2.89e-12 | 3 |
leptomeningeal cell | 3.24e-12 | 3 |
columnar/cuboidal epithelial cell | 7.72e-12 | 27 |
ecto-epithelial cell | 1.48e-09 | 34 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.06e-99 | 3 |
ciliary body | 4.06e-99 | 3 |
atypical epithelium | 1.21e-74 | 4 |
vasculature of eye | 3.84e-50 | 6 |
uvea | 3.84e-50 | 6 |
vasculature of head | 3.84e-50 | 6 |
vasculature of organ | 2.54e-48 | 11 |
pigment epithelium of eye | 8.12e-28 | 11 |
anterior segment of eyeball | 4.67e-22 | 14 |
camera-type eye | 1.06e-15 | 20 |
simple eye | 1.06e-15 | 20 |
immature eye | 1.06e-15 | 20 |
ocular region | 1.06e-15 | 20 |
eyeball of camera-type eye | 1.06e-15 | 20 |
optic cup | 1.06e-15 | 20 |
optic vesicle | 1.06e-15 | 20 |
eye primordium | 1.06e-15 | 20 |
eye | 5.40e-15 | 21 |
visual system | 5.40e-15 | 21 |
face | 2.38e-14 | 22 |
sense organ | 3.20e-13 | 24 |
sensory system | 3.20e-13 | 24 |
entire sense organ system | 3.20e-13 | 24 |
blood-cerebrospinal fluid barrier | 3.24e-12 | 3 |
ectodermal placode | 2.08e-10 | 31 |
brain vasculature | 7.01e-08 | 5 |
vasculature | 2.39e-07 | 78 |
vascular system | 2.39e-07 | 78 |
subdivision of head | 7.75e-07 | 49 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.