FFCP PHASE1:Hg19::chr17:27229915..27229940,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147015|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28326|TSSclassifier=S|UniProt=|association_with_transcript=34bp_to_uc002hdd.3_5end|coexpression_cluster_id=C33|description=CAGE_peak_5_at_DHRS13_5end|id=chr17:27229915..27229940,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2!CL:0000775;6.20e-20;3!CL:0002032;2.06e-15;1!CL:0000557;2.06e-15;1!CL:0000094;4.58e-08;8|ontology_enrichment_celltype_v019_2=CL:0000764,4.49e-30,2;CL:0000765,4.49e-30,2;CL:0000050,4.49e-30,2;CL:0000038,4.49e-30,2;CL:0000558,4.49e-30,2;CL:0000547,4.49e-30,2;CL:0000549,4.49e-30,2;CL:0000550,4.49e-30,2;CL:0000552,4.49e-30,2;CL:0000775,5.37e-20,3;CL:0000094,4.34e-08,8|ontology_enrichment_development_v019=UBERON:0005425;2.06e-15;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.42e-07!115|ontology_enrichment_uberon_v019=UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0002107;2.64e-12;19!UBERON:0006925;2.64e-12;19!UBERON:0002423;2.05e-09;25!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2!UBERON:0002365;1.40e-07;31!UBERON:0002330;1.40e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-15,1;UBERON:0001785,1.78e-15,1;UBERON:0002464,1.78e-15,1;UBERON:0004904,1.78e-15,1;UBERON:0001021,1.78e-15,1;UBERON:0003902,1.78e-15,1;UBERON:0005425,1.78e-15,1;UBERON:0002107,2.76e-12,19;UBERON:0006925,2.76e-12,19;UBERON:0008836,2.76e-12,19;UBERON:0008835,1.20e-10,22;UBERON:0003894,1.20e-10,22;UBERON:0009854,3.39e-10,23;UBERON:0007499,2.12e-09,25;UBERON:0009497,2.12e-09,25;UBERON:0000015,2.12e-09,25;UBERON:0002423,2.12e-09,25;UBERON:0006235,2.12e-09,25;UBERON:0004161,2.12e-09,25;UBERON:0009856,4.77e-09,26;UBERON:0003714,2.15e-08,2;UBERON:0005162,2.15e-08,2;UBERON:0000122,2.15e-08,2;UBERON:0002365,1.27e-07,31;UBERON:0002330,1.27e-07,31;UBERON:0002368,8.94e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0.76228387266739,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0.213455115606889,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6000833472012,33.4637377311873,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0,1.62009431171434,0,0,1.92495971052672,0,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0.19606253431774,0,0.37950746544837,0.317873157960757,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0.275078873194468,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,2.19828350517124,1.32506888912221,0.258565912723101,0.39669780522807,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0.124192805882767,0,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0.966868319603658,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p5@DHRS13}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=147015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28326 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=34bp_to_uc002hdd.3_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_5_at_DHRS13_5end | |||
|id=chr17:27229915..27229940,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2!CL:0000775;6.20e-20;3!CL:0002032;2.06e-15;1!CL:0000557;2.06e-15;1!CL:0000094;4.58e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.49e-30,2;CL:0000765,4.49e-30,2;CL:0000050,4.49e-30,2;CL:0000038,4.49e-30,2;CL:0000558,4.49e-30,2;CL:0000547,4.49e-30,2;CL:0000549,4.49e-30,2;CL:0000550,4.49e-30,2;CL:0000552,4.49e-30,2;CL:0000775,5.37e-20,3;CL:0000094,4.34e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.06e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0002107;2.64e-12;19!UBERON:0006925;2.64e-12;19!UBERON:0002423;2.05e-09;25!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2!UBERON:0002365;1.40e-07;31!UBERON:0002330;1.40e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-15,1;UBERON:0001785,1.78e-15,1;UBERON:0002464,1.78e-15,1;UBERON:0004904,1.78e-15,1;UBERON:0001021,1.78e-15,1;UBERON:0003902,1.78e-15,1;UBERON:0005425,1.78e-15,1;UBERON:0002107,2.76e-12,19;UBERON:0006925,2.76e-12,19;UBERON:0008836,2.76e-12,19;UBERON:0008835,1.20e-10,22;UBERON:0003894,1.20e-10,22;UBERON:0009854,3.39e-10,23;UBERON:0007499,2.12e-09,25;UBERON:0009497,2.12e-09,25;UBERON:0000015,2.12e-09,25;UBERON:0002423,2.12e-09,25;UBERON:0006235,2.12e-09,25;UBERON:0004161,2.12e-09,25;UBERON:0009856,4.77e-09,26;UBERON:0003714,2.15e-08,2;UBERON:0005162,2.15e-08,2;UBERON:0000122,2.15e-08,2;UBERON:0002365,1.27e-07,31;UBERON:0002330,1.27e-07,31;UBERON:0002368,8.94e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0.76228387266739,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0.213455115606889,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6000833472012,33.4637377311873,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0,1.62009431171434,0,0,1.92495971052672,0,0.185803175125719,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0.19606253431774,0,0.37950746544837,0.317873157960757,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0.275078873194468,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,2.19828350517124,1.32506888912221,0.258565912723101,0.39669780522807,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0.124192805882767,0,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0.966868319603658,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@DHRS13 | |||
}} |
Revision as of 12:48, 11 September 2013
Short description: | p5@DHRS13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_DHRS13_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 34bp_to_uc002hdd.3_5end |
EntrezGene: | DHRS13 |
HGNC: | 28326 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.49e-30 | 2 |
erythroblast | 4.49e-30 | 2 |
megakaryocyte-erythroid progenitor cell | 4.49e-30 | 2 |
erythroid progenitor cell | 4.49e-30 | 2 |
reticulocyte | 4.49e-30 | 2 |
proerythroblast | 4.49e-30 | 2 |
basophilic erythroblast | 4.49e-30 | 2 |
polychromatophilic erythroblast | 4.49e-30 | 2 |
orthochromatic erythroblast | 4.49e-30 | 2 |
neutrophil | 5.37e-20 | 3 |
granulocyte | 4.34e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-15 | 1 |
cranial nerve | 1.78e-15 | 1 |
nerve trunk | 1.78e-15 | 1 |
nerve connecting eye with brain | 1.78e-15 | 1 |
nerve | 1.78e-15 | 1 |
retinal neural layer | 1.78e-15 | 1 |
presumptive neural retina | 1.78e-15 | 1 |
liver | 2.76e-12 | 19 |
digestive gland | 2.76e-12 | 19 |
liver bud | 2.76e-12 | 19 |
hepatic diverticulum | 1.20e-10 | 22 |
liver primordium | 1.20e-10 | 22 |
digestive tract diverticulum | 3.39e-10 | 23 |
epithelial sac | 2.12e-09 | 25 |
epithelium of foregut-midgut junction | 2.12e-09 | 25 |
anatomical boundary | 2.12e-09 | 25 |
hepatobiliary system | 2.12e-09 | 25 |
foregut-midgut junction | 2.12e-09 | 25 |
septum transversum | 2.12e-09 | 25 |
sac | 4.77e-09 | 26 |
neural tissue | 2.15e-08 | 2 |
multi cell component structure | 2.15e-08 | 2 |
neuron projection bundle | 2.15e-08 | 2 |
exocrine gland | 1.27e-07 | 31 |
exocrine system | 1.27e-07 | 31 |
endocrine gland | 8.94e-07 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.