FFCP PHASE1:Hg19::chr17:72439704..72439736,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13309|TSSclassifier=W|UniProt=|association_with_transcript=480bp_to_ENST00000482723_5end|coexpression_cluster_id=C92|description=CAGE_peak_8_at_GPRC5C_5end|id=chr17:72439704..72439736,+|ontology_enrichment_celltype=CL:0002393!3.22e-17!9;CL:0002397!3.22e-17!9;CL:0002194!1.64e-15!63;CL:0000576!1.64e-15!63;CL:0000040!1.64e-15!63;CL:0000559!1.64e-15!63;CL:0002009!6.42e-15!65;CL:0002057!1.67e-14!42;CL:0000875!4.81e-14!3;CL:0002396!4.81e-14!3;CL:0002619!6.50e-14!3;CL:0000839!1.39e-13!70;CL:0000860!2.43e-13!45;CL:0000557!2.45e-13!71;CL:0000766!3.27e-12!76;CL:0000763!4.27e-08!112;CL:0000049!4.27e-08!112|ontology_enrichment_celltype_v019=CL:0000875;1.09e-30;3!CL:0002396;1.09e-30;3!CL:0000576;7.86e-16;48!CL:0002393;9.04e-16;6!CL:0002397;9.04e-16;6!CL:0000766;3.41e-09;69!CL:0002619;1.12e-08;3|ontology_enrichment_celltype_v019_2=CL:0002393,8.96e-40,9;CL:0002397,8.96e-40,9;CL:0000875,1.09e-30,3;CL:0002396,1.09e-30,3;CL:0000860,6.21e-19,42;CL:0002057,6.21e-19,42;CL:0002194,6.56e-18,59;CL:0000576,6.56e-18,59;CL:0000040,6.56e-18,59;CL:0000559,6.56e-18,59;CL:0002009,2.49e-17,61;CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0000839,4.93e-16,66;CL:0000557,8.50e-16,67;CL:0000766,1.04e-14,72;CL:0000763,8.31e-10,108;CL:0000049,8.31e-10,108;CL:0002087,3.34e-09,115;CL:0002031,8.17e-09,120;CL:0002619,1.12e-08,3;CL:0000738,9.30e-08,136|ontology_enrichment_development_v019=CL:0002057;3.72e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.75e-15!115;UBERON:0007023!8.18e-13!115;UBERON:0002390!7.46e-12!102;UBERON:0003061!7.46e-12!102;UBERON:0002193!1.36e-11!112;UBERON:0002371!2.06e-11!80;UBERON:0001474!2.36e-10!86;UBERON:0004765!2.88e-08!101;UBERON:0001434!2.88e-08!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.10e-14,76;UBERON:0001474,6.32e-13,82;UBERON:0004765,8.87e-12,90;UBERON:0002405,2.13e-11,93;UBERON:0002390,8.16e-11,98;UBERON:0003061,8.16e-11,98;UBERON:0001434,1.35e-10,100;UBERON:0002193,8.31e-10,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2848725468772,0.647787332037959,0.515151135268373,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,15.5201138974482,15.7243984131282,0,2.70318407114711,1.12507910687956,0.285012743741249,26.8537514218772,18.6317436839927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81035807563014,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.515663103788617,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@GPRC5C}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13309 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=480bp_to_ENST00000482723_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_8_at_GPRC5C_5end | |||
|id=chr17:72439704..72439736,+ | |||
|ontology_enrichment_celltype=CL:0002393!3.22e-17!9;CL:0002397!3.22e-17!9;CL:0002194!1.64e-15!63;CL:0000576!1.64e-15!63;CL:0000040!1.64e-15!63;CL:0000559!1.64e-15!63;CL:0002009!6.42e-15!65;CL:0002057!1.67e-14!42;CL:0000875!4.81e-14!3;CL:0002396!4.81e-14!3;CL:0002619!6.50e-14!3;CL:0000839!1.39e-13!70;CL:0000860!2.43e-13!45;CL:0000557!2.45e-13!71;CL:0000766!3.27e-12!76;CL:0000763!4.27e-08!112;CL:0000049!4.27e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.09e-30;3!CL:0002396;1.09e-30;3!CL:0000576;7.86e-16;48!CL:0002393;9.04e-16;6!CL:0002397;9.04e-16;6!CL:0000766;3.41e-09;69!CL:0002619;1.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,8.96e-40,9;CL:0002397,8.96e-40,9;CL:0000875,1.09e-30,3;CL:0002396,1.09e-30,3;CL:0000860,6.21e-19,42;CL:0002057,6.21e-19,42;CL:0002194,6.56e-18,59;CL:0000576,6.56e-18,59;CL:0000040,6.56e-18,59;CL:0000559,6.56e-18,59;CL:0002009,2.49e-17,61;CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0000839,4.93e-16,66;CL:0000557,8.50e-16,67;CL:0000766,1.04e-14,72;CL:0000763,8.31e-10,108;CL:0000049,8.31e-10,108;CL:0002087,3.34e-09,115;CL:0002031,8.17e-09,120;CL:0002619,1.12e-08,3;CL:0000738,9.30e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.75e-15!115;UBERON:0007023!8.18e-13!115;UBERON:0002390!7.46e-12!102;UBERON:0003061!7.46e-12!102;UBERON:0002193!1.36e-11!112;UBERON:0002371!2.06e-11!80;UBERON:0001474!2.36e-10!86;UBERON:0004765!2.88e-08!101;UBERON:0001434!2.88e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.10e-14,76;UBERON:0001474,6.32e-13,82;UBERON:0004765,8.87e-12,90;UBERON:0002405,2.13e-11,93;UBERON:0002390,8.16e-11,98;UBERON:0003061,8.16e-11,98;UBERON:0001434,1.35e-10,100;UBERON:0002193,8.31e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2848725468772,0.647787332037959,0.515151135268373,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,15.5201138974482,15.7243984131282,0,2.70318407114711,1.12507910687956,0.285012743741249,26.8537514218772,18.6317436839927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81035807563014,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.515663103788617,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@GPRC5C | |||
}} |
Revision as of 15:30, 11 September 2013
Short description: | p8@GPRC5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_GPRC5C_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 480bp_to_ENST00000482723_5end |
EntrezGene: | GPRC5C |
HGNC: | 13309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 8.96e-40 | 9 |
CD14-positive, CD16-positive monocyte | 8.96e-40 | 9 |
non-classical monocyte | 1.09e-30 | 3 |
CD14-low, CD16-positive monocyte | 1.09e-30 | 3 |
classical monocyte | 6.21e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.21e-19 | 42 |
monopoietic cell | 6.56e-18 | 59 |
monocyte | 6.56e-18 | 59 |
monoblast | 6.56e-18 | 59 |
promonocyte | 6.56e-18 | 59 |
macrophage dendritic cell progenitor | 2.49e-17 | 61 |
defensive cell | 1.41e-16 | 48 |
phagocyte | 1.41e-16 | 48 |
myeloid lineage restricted progenitor cell | 4.93e-16 | 66 |
granulocyte monocyte progenitor cell | 8.50e-16 | 67 |
myeloid leukocyte | 1.04e-14 | 72 |
myeloid cell | 8.31e-10 | 108 |
common myeloid progenitor | 8.31e-10 | 108 |
nongranular leukocyte | 3.34e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.17e-09 | 120 |
adult endothelial progenitor cell | 1.12e-08 | 3 |
leukocyte | 9.30e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.10e-14 | 76 |
bone element | 6.32e-13 | 82 |
skeletal element | 8.87e-12 | 90 |
immune system | 2.13e-11 | 93 |
hematopoietic system | 8.16e-11 | 98 |
blood island | 8.16e-11 | 98 |
skeletal system | 1.35e-10 | 100 |
hemolymphoid system | 8.31e-10 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.