FFCP PHASE1:Hg19::chr4:40058783..40058795,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=344967|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=23bp_to_ENST00000381811,NR_027277,uc011byr.1_5end|coexpression_cluster_id=C870|description=CAGE_peak_3_at_LOC344967_5end|id=chr4:40058783..40058795,-|ontology_enrichment_celltype=CL:0000766!1.09e-27!76;CL:0000860!1.19e-27!45;CL:0002057!1.94e-26!42;CL:0000557!8.15e-25!71;CL:0000839!4.68e-24!70;CL:0002009!1.89e-21!65;CL:0002194!2.57e-21!63;CL:0000576!2.57e-21!63;CL:0000040!2.57e-21!63;CL:0000559!2.57e-21!63;CL:0000763!2.30e-19!112;CL:0000049!2.30e-19!112;CL:0000738!8.26e-17!140;CL:0000988!1.11e-14!182;CL:0000037!1.18e-14!172;CL:0000566!1.18e-14!172;CL:0002031!8.14e-14!124;CL:0002032!8.85e-13!165;CL:0000837!8.85e-13!165;CL:0002087!1.08e-12!119;CL:0002393!7.70e-10!9;CL:0002397!7.70e-10!9;CL:0002371!7.41e-07!591|ontology_enrichment_celltype_v019=CL:0000576;1.68e-14;48!CL:0000767;7.70e-14;3!CL:0000094;1.15e-13;8!CL:0000766;2.88e-13;69!CL:0002393;1.00e-12;6!CL:0002397;1.00e-12;6!CL:0000860;4.21e-12;33!CL:0002057;4.21e-12;33!CL:0000771;6.43e-10;2!CL:0000081;7.40e-10;11!CL:0000473;9.38e-09;39!CL:0000234;9.38e-09;39!CL:0000097;1.24e-08;5!CL:0000763;1.33e-07;100|ontology_enrichment_celltype_v019_2=CL:0000766,6.82e-32,72;CL:0000860,2.18e-26,42;CL:0002057,2.18e-26,42;CL:0000473,1.41e-22,48;CL:0000234,1.41e-22,48;CL:0000839,1.19e-21,66;CL:0000557,2.92e-21,67;CL:0000763,3.59e-21,108;CL:0000049,3.59e-21,108;CL:0000738,3.01e-20,136;CL:0002393,5.32e-18,9;CL:0002397,5.32e-18,9;CL:0000037,8.37e-18,168;CL:0002194,2.98e-17,59;CL:0000576,2.98e-17,59;CL:0000040,2.98e-17,59;CL:0000559,2.98e-17,59;CL:0002009,1.44e-16,61;CL:0000988,1.53e-16,177;CL:0002032,9.57e-15,161;CL:0000837,9.57e-15,161;CL:0000767,7.96e-14,3;CL:0000094,1.35e-13,8;CL:0002031,2.02e-12,120;CL:0002087,1.12e-11,115;CL:0000771,8.08e-10,2;CL:0000081,8.27e-10,11;CL:0000097,8.89e-09,5;CL:0002028,8.89e-09,5;CL:0000875,6.00e-07,3;CL:0002396,6.00e-07,3|ontology_enrichment_development_v019=CL:0002057;1.16e-17;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.27e-22!80;UBERON:0002390!5.58e-21!102;UBERON:0003061!5.58e-21!102;UBERON:0001474!4.17e-20!86;UBERON:0002193!9.42e-20!112;UBERON:0002405!3.46e-17!115;UBERON:0004765!6.01e-15!101;UBERON:0001434!6.01e-15!101;UBERON:0003081!3.56e-14!216;UBERON:0002204!9.50e-10!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.22e-20,76;UBERON:0001474,2.17e-18,82;UBERON:0002390,5.80e-18,98;UBERON:0003061,5.80e-18,98;UBERON:0004765,2.48e-16,90;UBERON:0002193,8.22e-16,108;UBERON:0002405,1.19e-15,93;UBERON:0001434,3.20e-14,100;UBERON:0003081,2.09e-13,203;UBERON:0002204,2.22e-08,167|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,1.57345710739562,1.15148819429164,5.88301268601089,0.919421224478927,1.50602959389125,0.369754010166788,0,0,1.17440175733939,3.87796785972314,3.00816671205213,16.4928261744047,0,0,0.257575567634187,0.436194716338694,0,0.970336244751265,0.929716147622738,0.411167888021826,0.619412741790207,1.7261543539329,0.768482119587302,1.6553756092201,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.224723484445085,1.53041946185451,0.320929027076094,1.27867425159808,2.30895910130701,1.39624560335142,5.11469700639233,1.45104619314292,0,0.622822248995575,2.00998932205395,0,1.08594422352558,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,2.30624510059213,0.44931452458598,1.05123824989054,0.48217676009124,1.71007646244749,0.59675003159727,1.82664153764634,0,0,0,0,0,0,0,0,1.70763890732835,0,1.52909291250092,1.32171328579026,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0.398873881556595,0,0,0.371457501329565,0.39752481473341,0,0,1.13061588384802,0,0.550236083880135,1.25396979922086,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,1.62028389576352,0,0,0.225222960966644,6.13266549863533,0,0.916008719652036,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0.743155811443641,0,0,0,0,0,0.383382679165211,0.492663237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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=344967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000381811,NR_027277,uc011byr.1_5end | |||
|coexpression_cluster_id=C870 | |||
|description=CAGE_peak_3_at_LOC344967_5end | |||
|id=chr4:40058783..40058795,- | |||
|ontology_enrichment_celltype=CL:0000766!1.09e-27!76;CL:0000860!1.19e-27!45;CL:0002057!1.94e-26!42;CL:0000557!8.15e-25!71;CL:0000839!4.68e-24!70;CL:0002009!1.89e-21!65;CL:0002194!2.57e-21!63;CL:0000576!2.57e-21!63;CL:0000040!2.57e-21!63;CL:0000559!2.57e-21!63;CL:0000763!2.30e-19!112;CL:0000049!2.30e-19!112;CL:0000738!8.26e-17!140;CL:0000988!1.11e-14!182;CL:0000037!1.18e-14!172;CL:0000566!1.18e-14!172;CL:0002031!8.14e-14!124;CL:0002032!8.85e-13!165;CL:0000837!8.85e-13!165;CL:0002087!1.08e-12!119;CL:0002393!7.70e-10!9;CL:0002397!7.70e-10!9;CL:0002371!7.41e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.68e-14;48!CL:0000767;7.70e-14;3!CL:0000094;1.15e-13;8!CL:0000766;2.88e-13;69!CL:0002393;1.00e-12;6!CL:0002397;1.00e-12;6!CL:0000860;4.21e-12;33!CL:0002057;4.21e-12;33!CL:0000771;6.43e-10;2!CL:0000081;7.40e-10;11!CL:0000473;9.38e-09;39!CL:0000234;9.38e-09;39!CL:0000097;1.24e-08;5!CL:0000763;1.33e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.82e-32,72;CL:0000860,2.18e-26,42;CL:0002057,2.18e-26,42;CL:0000473,1.41e-22,48;CL:0000234,1.41e-22,48;CL:0000839,1.19e-21,66;CL:0000557,2.92e-21,67;CL:0000763,3.59e-21,108;CL:0000049,3.59e-21,108;CL:0000738,3.01e-20,136;CL:0002393,5.32e-18,9;CL:0002397,5.32e-18,9;CL:0000037,8.37e-18,168;CL:0002194,2.98e-17,59;CL:0000576,2.98e-17,59;CL:0000040,2.98e-17,59;CL:0000559,2.98e-17,59;CL:0002009,1.44e-16,61;CL:0000988,1.53e-16,177;CL:0002032,9.57e-15,161;CL:0000837,9.57e-15,161;CL:0000767,7.96e-14,3;CL:0000094,1.35e-13,8;CL:0002031,2.02e-12,120;CL:0002087,1.12e-11,115;CL:0000771,8.08e-10,2;CL:0000081,8.27e-10,11;CL:0000097,8.89e-09,5;CL:0002028,8.89e-09,5;CL:0000875,6.00e-07,3;CL:0002396,6.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.27e-22!80;UBERON:0002390!5.58e-21!102;UBERON:0003061!5.58e-21!102;UBERON:0001474!4.17e-20!86;UBERON:0002193!9.42e-20!112;UBERON:0002405!3.46e-17!115;UBERON:0004765!6.01e-15!101;UBERON:0001434!6.01e-15!101;UBERON:0003081!3.56e-14!216;UBERON:0002204!9.50e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.22e-20,76;UBERON:0001474,2.17e-18,82;UBERON:0002390,5.80e-18,98;UBERON:0003061,5.80e-18,98;UBERON:0004765,2.48e-16,90;UBERON:0002193,8.22e-16,108;UBERON:0002405,1.19e-15,93;UBERON:0001434,3.20e-14,100;UBERON:0003081,2.09e-13,203;UBERON:0002204,2.22e-08,167 | |||
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| |||
|short_description=p3@LOC344967 | |||
}} |
Revision as of 10:51, 13 September 2013
Short description: | p3@LOC344967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC344967_5end |
Coexpression cluster: | C870_CD14_Mast_Basophils_Peripheral_Eosinophils_Endothelial_Natural |
Association with transcript: | 23bp_to_ENST00000381811, NR_027277, uc011byr.1_5end |
EntrezGene: | LOC344967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.22e-20 | 76 |
bone element | 2.17e-18 | 82 |
hematopoietic system | 5.80e-18 | 98 |
blood island | 5.80e-18 | 98 |
skeletal element | 2.48e-16 | 90 |
hemolymphoid system | 8.22e-16 | 108 |
immune system | 1.19e-15 | 93 |
skeletal system | 3.20e-14 | 100 |
lateral plate mesoderm | 2.09e-13 | 203 |
musculoskeletal system | 2.22e-08 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.