FFCP PHASE1:Hg19::chr4:46392290..46392324,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2555|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4076|TSSclassifier=S|UniProt=G5E9Z6,Q4W5L8|association_with_transcript=96bp_to_ENST00000515082,uc003gxe.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_13_at_GABRA2_5end|id=chr4:46392290..46392324,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;5.40e-16;2!UBERON:0006601;3.81e-14;82!UBERON:0006222;6.15e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!2.46e-97!34;UBERON:0001869!1.86e-96!32;UBERON:0002791!5.50e-93!33;UBERON:0002780!1.96e-92!41;UBERON:0001890!1.96e-92!41;UBERON:0006240!1.96e-92!41;UBERON:0002020!3.29e-90!34;UBERON:0003528!3.29e-90!34;UBERON:0003080!4.01e-90!42;UBERON:0001049!5.64e-79!57;UBERON:0005068!5.64e-79!57;UBERON:0006241!5.64e-79!57;UBERON:0007135!5.64e-79!57;UBERON:0002616!4.25e-76!59;UBERON:0002619!7.19e-76!22;UBERON:0000955!1.13e-71!69;UBERON:0006238!1.13e-71!69;UBERON:0001950!1.79e-67!20;UBERON:0001017!8.66e-67!82;UBERON:0000956!1.48e-66!25;UBERON:0000203!1.48e-66!25;UBERON:0005743!2.12e-63!86;UBERON:0003056!2.18e-60!61;UBERON:0007023!1.76e-58!115;UBERON:0003075!7.04e-57!86;UBERON:0007284!7.04e-57!86;UBERON:0000073!8.58e-57!94;UBERON:0001016!8.58e-57!94;UBERON:0002346!4.81e-54!90;UBERON:0000033!7.20e-40!123;UBERON:0000153!1.10e-37!129;UBERON:0007811!1.10e-37!129;UBERON:0002420!1.83e-32!9;UBERON:0007245!1.83e-32!9;UBERON:0010009!1.83e-32!9;UBERON:0010011!1.83e-32!9;UBERON:0000454!1.83e-32!9;UBERON:0004121!1.35e-28!169;UBERON:0000924!9.14e-28!173;UBERON:0006601!9.14e-28!173;UBERON:0000200!4.94e-27!6;UBERON:0002308!2.32e-24!9;UBERON:0000125!2.32e-24!9;UBERON:0009663!1.20e-23!7;UBERON:0000349!1.36e-23!5;UBERON:0001872!1.21e-22!5;UBERON:0001871!1.20e-20!7;UBERON:0000025!1.10e-19!194;UBERON:0000369!1.20e-19!4;UBERON:0002435!1.20e-19!4;UBERON:0000204!1.20e-19!4;UBERON:0010082!1.20e-19!4;UBERON:0002021!2.53e-15!5;UBERON:0005383!3.92e-15!3;UBERON:0005382!3.92e-15!3;UBERON:0002771!2.07e-14!3;UBERON:0004111!2.14e-14!241;UBERON:0000064!4.00e-14!219;UBERON:0000477!6.55e-12!286;UBERON:0000483!2.48e-11!309;UBERON:0000119!3.79e-11!312;UBERON:0001876!9.55e-11!2;UBERON:0001873!1.46e-10!2;UBERON:0010122!1.46e-10!2;UBERON:0001870!2.93e-10!2;UBERON:0001954!4.42e-10!2;UBERON:0003022!4.42e-10!2;UBERON:0002421!4.42e-10!2;UBERON:0002600!4.42e-10!2;UBERON:0000475!5.55e-10!365;UBERON:0001875!8.33e-10!2;UBERON:0006514!8.33e-10!2;UBERON:0002360!1.55e-09!2;UBERON:0000094!1.55e-09!2;UBERON:0007645!1.55e-09!2;UBERON:0000062!3.76e-07!511|ontology_enrichment_uberon_v019=UBERON:0001869;3.50e-110;32!UBERON:0001893;3.18e-103;34!UBERON:0002791;4.76e-102;32!UBERON:0002619;2.77e-100;22!UBERON:0003528;4.22e-94;34!UBERON:0002020;4.22e-94;34!UBERON:0000956;2.36e-88;25!UBERON:0000203;2.36e-88;25!UBERON:0001950;5.80e-87;20!UBERON:0002780;2.63e-74;41!UBERON:0001890;2.63e-74;41!UBERON:0000073;2.59e-41;53!UBERON:0002616;2.59e-41;53!UBERON:0002420;1.87e-40;9!UBERON:0007245;1.87e-40;9!UBERON:0010009;1.87e-40;9!UBERON:0010011;1.87e-40;9!UBERON:0000454;1.87e-40;9!UBERON:0000349;1.82e-37;5!UBERON:0000369;1.06e-30;4!UBERON:0002435;1.06e-30;4!UBERON:0000204;1.06e-30;4!UBERON:0000200;1.52e-30;6!UBERON:0000955;4.78e-30;68!UBERON:0009663;8.42e-27;7!UBERON:0001871;1.26e-26;6!UBERON:0001017;1.83e-25;75!UBERON:0002021;7.41e-24;5!UBERON:0001872;1.19e-23;5!UBERON:0005383;2.36e-23;3!UBERON:0005382;2.36e-23;3!UBERON:0000125;7.90e-21;9!UBERON:0002308;7.90e-21;9!UBERON:0001016;1.44e-18;83!UBERON:0001876;1.86e-16;2!UBERON:0001873;5.40e-16;2!UBERON:0002771;8.17e-16;2!UBERON:0001954;1.79e-15;2!UBERON:0003022;1.79e-15;2!UBERON:0002421;1.79e-15;2!UBERON:0002600;1.79e-15;2!UBERON:0007023;3.57e-13;114!UBERON:0001870;5.68e-11;3!UBERON:0001882;4.02e-09;1!UBERON:0001874;4.02e-09;1!UBERON:0005403;4.02e-09;1!UBERON:0002022;6.15e-09;1!UBERON:0007190;6.15e-09;1!UBERON:0002581;1.37e-08;1!UBERON:0002902;1.37e-08;1!UBERON:0009899;1.37e-08;1!UBERON:0011216;2.42e-08;132!UBERON:0010314;4.47e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.63e-125,32;UBERON:0001893,1.48e-117,34;UBERON:0002791,2.03e-114,32;UBERON:0003528,1.13e-107,34;UBERON:0002020,1.13e-107,34;UBERON:0002780,5.06e-106,41;UBERON:0001890,5.06e-106,41;UBERON:0003080,5.06e-106,41;UBERON:0006240,5.06e-106,41;UBERON:0002619,3.16e-100,22;UBERON:0000956,2.65e-88,25;UBERON:0000203,2.65e-88,25;UBERON:0001950,5.22e-87,20;UBERON:0000073,1.28e-81,53;UBERON:0002616,1.28e-81,53;UBERON:0001049,4.03e-77,56;UBERON:0005068,4.03e-77,56;UBERON:0006241,4.03e-77,56;UBERON:0007135,4.03e-77,56;UBERON:0003056,1.37e-70,61;UBERON:0000955,2.18e-67,68;UBERON:0006238,2.18e-67,68;UBERON:0001017,3.22e-56,81;UBERON:0003075,9.59e-52,82;UBERON:0007284,9.59e-52,82;UBERON:0001016,2.48e-50,89;UBERON:0002346,3.48e-49,86;UBERON:0002420,2.05e-40,9;UBERON:0007245,2.05e-40,9;UBERON:0010009,2.05e-40,9;UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2555 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |||
|TSSclassifier=S | |||
|UniProt=G5E9Z6,Q4W5L8 | |||
|association_with_transcript=96bp_to_ENST00000515082,uc003gxe.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_GABRA2_5end | |||
|id=chr4:46392290..46392324,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.40e-16;2!UBERON:0006601;3.81e-14;82!UBERON:0006222;6.15e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p13@GABRA2 | |||
}} |
Revision as of 11:01, 13 September 2013
Short description: | p13@GABRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_GABRA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 96bp_to_ENST00000515082, uc003gxe.2_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | G5E9Z6Q4W5L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.