FFCP PHASE1:Hg19::chr5:118691687..118691700,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25816|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17260|TSSclassifier=S|UniProt=O95379|association_with_transcript=-29bp_to_ENST00000415806_5end|coexpression_cluster_id=C0|description=CAGE_peak_3_at_TNFAIP8_5end|id=chr5:118691687..118691700,+|ontology_enrichment_celltype=CL:0000738!1.90e-41!140;CL:0002087!1.51e-38!119;CL:0002031!2.75e-33!124;CL:0002009!1.12e-31!65;CL:0002194!2.88e-30!63;CL:0000576!2.88e-30!63;CL:0000040!2.88e-30!63;CL:0000559!2.88e-30!63;CL:0002057!2.46e-29!42;CL:0000766!2.65e-28!76;CL:0000037!9.07e-27!172;CL:0000566!9.07e-27!172;CL:0000557!1.00e-26!71;CL:0000860!1.44e-25!45;CL:0000988!2.14e-25!182;CL:0002032!6.89e-25!165;CL:0000837!6.89e-25!165;CL:0000839!1.48e-24!70;CL:0000048!7.44e-18!430;CL:0000034!5.24e-17!444;CL:0000723!6.93e-17!436;CL:0000134!1.18e-16!358;CL:0002320!4.83e-16!365;CL:0000763!8.44e-16!112;CL:0000049!8.44e-16!112;CL:0000219!6.55e-11!390;CL:0000945!1.59e-10!24;CL:0000826!1.59e-10!24;CL:0000542!8.32e-09!53;CL:0000051!8.32e-09!53;CL:0000838!1.99e-08!52;CL:0000451!3.48e-08!10;CL:0000990!3.93e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.09e-37;33!CL:0002057;1.09e-37;33!CL:0000473;1.25e-36;39!CL:0000234;1.25e-36;39!CL:0000576;7.38e-32;48!CL:0000766;7.54e-22;69!CL:0002087;4.87e-17;104!CL:0000945;8.27e-16;24!CL:0000738;1.84e-15;136!CL:0000451;2.31e-13;10!CL:0000990;1.65e-11;8!CL:0000236;1.97e-09;13!CL:0000763;2.85e-09;100!CL:0000988;5.73e-09;177!CL:0000219;1.65e-08;193!CL:0000840;1.91e-08;5!CL:0002393;3.56e-08;6!CL:0002397;3.56e-08;6!CL:0000235;1.32e-07;6!CL:0000453;4.33e-07;5|ontology_enrichment_celltype_v019_2=CL:0000738,2.49e-69,136;CL:0002087,1.25e-63,115;CL:0002009,1.19e-60,61;CL:0002031,3.18e-58,120;CL:0002194,4.46e-58,59;CL:0000576,4.46e-58,59;CL:0000040,4.46e-58,59;CL:0000559,4.46e-58,59;CL:0000473,3.22e-57,48;CL:0000234,3.22e-57,48;CL:0000766,1.54e-53,72;CL:0000557,2.66e-53,67;CL:0000860,6.85e-51,42;CL:0002057,6.85e-51,42;CL:0000037,9.43e-50,168;CL:0000839,9.91e-50,66;CL:0000988,1.78e-49,177;CL:0002032,1.79e-47,161;CL:0000837,1.79e-47,161;CL:0000763,1.74e-35,108;CL:0000049,1.74e-35,108;CL:0000134,4.24e-24,354;CL:0002320,6.48e-23,361;CL:0000048,2.59e-20,427;CL:0000034,9.18e-20,441;CL:0000723,1.71e-19,433;CL:0000219,8.62e-19,386;CL:0000945,5.21e-16,24;CL:0000826,5.21e-16,24;CL:0000451,2.75e-13,10;CL:0000990,1.97e-11,8;CL:0000542,9.28e-11,53;CL:0000051,9.28e-11,53;CL:0002393,1.24e-10,9;CL:0002397,1.24e-10,9;CL:0000236,2.10e-10,14;CL:0000838,3.66e-10,52;CL:0000840,1.93e-08,5;CL:0001029,1.93e-08,5;CL:0000235,1.49e-07,6;CL:0000453,5.13e-07,5|ontology_enrichment_development_v019=CL:0002057;1.40e-36;42!CL:0000049;1.59e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.99e-31!102;UBERON:0003061!8.99e-31!102;UBERON:0002193!2.05e-29!112;UBERON:0002371!5.21e-24!80;UBERON:0001474!4.98e-21!86;UBERON:0002405!1.79e-17!115;UBERON:0004765!4.67e-17!101;UBERON:0001434!4.67e-17!101;UBERON:0002204!1.67e-15!167;UBERON:0002384!7.78e-15!375;UBERON:0003081!1.12e-12!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.23e-51,108;UBERON:0002390,1.63e-51,98;UBERON:0003061,1.63e-51,98;UBERON:0002371,1.51e-49,76;UBERON:0002405,1.76e-48,93;UBERON:0001474,6.04e-46,82;UBERON:0004765,6.91e-40,90;UBERON:0001434,1.19e-36,100;UBERON:0003081,6.30e-22,203;UBERON:0002384,7.21e-22,371;UBERON:0002204,2.21e-20,167;UBERON:0000926,2.52e-11,315;UBERON:0004120,2.52e-11,315;UBERON:0006603,2.52e-11,315|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,3.00219895059391,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0,0.37129905888014,0,2.6893005858071,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,8.25264782077874,11.7403842913422,10.7833770399741,3.14691421479123,1.91914699048606,2.94150634300544,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,52.0755684019965,62.3693231632141,48.393424169635,10.9718582377563,3.2389366601898,6.18181362322048,3.05336301437086,4.1566353805769,6.30718559088322,37.1886459049095,53.0406575548155,47.0753683760557,73.0738676498262,65.5771408714498,109.491272438415,188.920633043667,207.200583430408,180.117227170475,10.5415710143859,22.924116604859,35.9557575112135,173.549566974302,192.23648721858,243.587444929435,12.5343494070952,22.5393933112444,20.4587880255693,276.569404413041,332.487741669008,335.078369959619,22.3611312078501,41.1971505551959,44.5237131645489,213.100624926946,464.029821344331,451.908289265583,4.64761629886272,4.03948169933583,2.93522103711726,1.57260083605093,2.85336096398862,2.73233497385036,2.28010194992999,2.38700012638908,3.28795476776341,1.75996244461323,4.91524750135918,8.00558328477199,4.69403244823158,5.60554381850417,3.4485146397269,7.93253847341835,4.77026877267682,1.70763890732835,4.11066032559657,2.29363936875137,0,14.0127140745384,1.84368859342554,1.180258620683,1.57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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |||
|TSSclassifier=S | |||
|UniProt=O95379 | |||
|association_with_transcript=-29bp_to_ENST00000415806_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_TNFAIP8_5end | |||
|id=chr5:118691687..118691700,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.90e-41!140;CL:0002087!1.51e-38!119;CL:0002031!2.75e-33!124;CL:0002009!1.12e-31!65;CL:0002194!2.88e-30!63;CL:0000576!2.88e-30!63;CL:0000040!2.88e-30!63;CL:0000559!2.88e-30!63;CL:0002057!2.46e-29!42;CL:0000766!2.65e-28!76;CL:0000037!9.07e-27!172;CL:0000566!9.07e-27!172;CL:0000557!1.00e-26!71;CL:0000860!1.44e-25!45;CL:0000988!2.14e-25!182;CL:0002032!6.89e-25!165;CL:0000837!6.89e-25!165;CL:0000839!1.48e-24!70;CL:0000048!7.44e-18!430;CL:0000034!5.24e-17!444;CL:0000723!6.93e-17!436;CL:0000134!1.18e-16!358;CL:0002320!4.83e-16!365;CL:0000763!8.44e-16!112;CL:0000049!8.44e-16!112;CL:0000219!6.55e-11!390;CL:0000945!1.59e-10!24;CL:0000826!1.59e-10!24;CL:0000542!8.32e-09!53;CL:0000051!8.32e-09!53;CL:0000838!1.99e-08!52;CL:0000451!3.48e-08!10;CL:0000990!3.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-37;33!CL:0002057;1.09e-37;33!CL:0000473;1.25e-36;39!CL:0000234;1.25e-36;39!CL:0000576;7.38e-32;48!CL:0000766;7.54e-22;69!CL:0002087;4.87e-17;104!CL:0000945;8.27e-16;24!CL:0000738;1.84e-15;136!CL:0000451;2.31e-13;10!CL:0000990;1.65e-11;8!CL:0000236;1.97e-09;13!CL:0000763;2.85e-09;100!CL:0000988;5.73e-09;177!CL:0000219;1.65e-08;193!CL:0000840;1.91e-08;5!CL:0002393;3.56e-08;6!CL:0002397;3.56e-08;6!CL:0000235;1.32e-07;6!CL:0000453;4.33e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.49e-69,136;CL:0002087,1.25e-63,115;CL:0002009,1.19e-60,61;CL:0002031,3.18e-58,120;CL:0002194,4.46e-58,59;CL:0000576,4.46e-58,59;CL:0000040,4.46e-58,59;CL:0000559,4.46e-58,59;CL:0000473,3.22e-57,48;CL:0000234,3.22e-57,48;CL:0000766,1.54e-53,72;CL:0000557,2.66e-53,67;CL:0000860,6.85e-51,42;CL:0002057,6.85e-51,42;CL:0000037,9.43e-50,168;CL:0000839,9.91e-50,66;CL:0000988,1.78e-49,177;CL:0002032,1.79e-47,161;CL:0000837,1.79e-47,161;CL:0000763,1.74e-35,108;CL:0000049,1.74e-35,108;CL:0000134,4.24e-24,354;CL:0002320,6.48e-23,361;CL:0000048,2.59e-20,427;CL:0000034,9.18e-20,441;CL:0000723,1.71e-19,433;CL:0000219,8.62e-19,386;CL:0000945,5.21e-16,24;CL:0000826,5.21e-16,24;CL:0000451,2.75e-13,10;CL:0000990,1.97e-11,8;CL:0000542,9.28e-11,53;CL:0000051,9.28e-11,53;CL:0002393,1.24e-10,9;CL:0002397,1.24e-10,9;CL:0000236,2.10e-10,14;CL:0000838,3.66e-10,52;CL:0000840,1.93e-08,5;CL:0001029,1.93e-08,5;CL:0000235,1.49e-07,6;CL:0000453,5.13e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-36;42!CL:0000049;1.59e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.99e-31!102;UBERON:0003061!8.99e-31!102;UBERON:0002193!2.05e-29!112;UBERON:0002371!5.21e-24!80;UBERON:0001474!4.98e-21!86;UBERON:0002405!1.79e-17!115;UBERON:0004765!4.67e-17!101;UBERON:0001434!4.67e-17!101;UBERON:0002204!1.67e-15!167;UBERON:0002384!7.78e-15!375;UBERON:0003081!1.12e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.23e-51,108;UBERON:0002390,1.63e-51,98;UBERON:0003061,1.63e-51,98;UBERON:0002371,1.51e-49,76;UBERON:0002405,1.76e-48,93;UBERON:0001474,6.04e-46,82;UBERON:0004765,6.91e-40,90;UBERON:0001434,1.19e-36,100;UBERON:0003081,6.30e-22,203;UBERON:0002384,7.21e-22,371;UBERON:0002204,2.21e-20,167;UBERON:0000926,2.52e-11,315;UBERON:0004120,2.52e-11,315;UBERON:0006603,2.52e-11,315 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,3.00219895059391,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0,0.37129905888014,0,2.6893005858071,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,8.25264782077874,11.7403842913422,10.7833770399741,3.14691421479123,1.91914699048606,2.94150634300544,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,52.0755684019965,62.3693231632141,48.393424169635,10.9718582377563,3.2389366601898,6.18181362322048,3.05336301437086,4.1566353805769,6.30718559088322,37.1886459049095,53.0406575548155,47.0753683760557,73.0738676498262,65.5771408714498,109.491272438415,188.920633043667,207.200583430408,180.117227170475,10.5415710143859,22.924116604859,35.9557575112135,173.549566974302,192.23648721858,243.587444929435,12.5343494070952,22.5393933112444,20.4587880255693,276.569404413041,332.487741669008,335.078369959619,22.3611312078501,41.1971505551959,44.5237131645489,213.100624926946,464.029821344331,451.908289265583,4.64761629886272,4.03948169933583,2.93522103711726,1.57260083605093,2.85336096398862,2.73233497385036,2.28010194992999,2.38700012638908,3.28795476776341,1.75996244461323,4.91524750135918,8.00558328477199,4.69403244823158,5.60554381850417,3.4485146397269,7.93253847341835,4.77026877267682,1.70763890732835,4.11066032559657,2.29363936875137,0,14.0127140745384,1.84368859342554,1.180258620683,1.57204305099666,0.411202997999018,0,0,0,0,0.891283655081389,0.294605907474837,0,0.270803863765016,0.768547918354051,0.650296737799391,0,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.236777252044017,0,0.80642697289893,1.33720097891754,0,0,0.670700859703636,0,0.361439152384566,1.00267582127178,0.289693037921647,0.795285947051099,0.973269740605272,0.189069634328136,0,0.087834785693126,0.261958150995425,0,0.370784442784429,8.11368484136708,9.5771355514597,13.4287540124054,4.5313218618015,6.29194401858141,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0.496971951695318,0.25326102332916,0.264818361626438,0.286836620748814,2.12801029319014,0.560677600142307,0,0.98667019366864,0,0.269421344139376,0,0,0,0,0.936480230490962,0,0.298897361103602,0,0,0.280901613404497,0,0,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0,0.213557388818567,1.27159140695737,0,0.206105058476878,1.03056216018252,0.744467425326359,0.168776332241266,0.68205903612839,0.252433774244115,1.74894807420369,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,3.25057549622385,3.60939740834793,0,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0.740707561268237,0,0,0,0.115930404975077,0.352226082707465,1.58803092537181,1.38895653772983,2.66355813128438,0,0,7.87894419479671,8.89216207529103,6.09387765383786,0,0,0,0.447792613514241,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,1.55126058909333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0,1.2162378064119,4.52031382288914,12.6500363689819,0,0,0,0.289562613335158,1.2328579353023,0.895304816199478,0.896681151948218,3.15249216323084,0.646882724578552,1.79680250791648,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.613457458595699,0,0.271265023699736,0.415941723061614,0.892144943985809,0.788512075169673,1.63997980989798,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.521301686808497,0,0,0.82707210449155,5.60856922128404,8.75165973988244,0,0,0,0.992431231275107,0.153461973288062,0,0,1.53512174720011,0.321707842287215,0,0.308419387605311,0,0.9033987161519,1.03850885836724,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,2.88473712910733,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0.580024309752732,0,0.15350367472613,0.551346289938122,0.322260734604821,0.435050081742686,0.340906509664404,0.445160178233687,0,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.858749320451947,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.318203247925937,1.56989728039846,1.97859703341646,1.64722217841633,0.824686816419805,0,0,0.421258456238981,0.48763373908959,1.46228093778771,0,0.818999468447914,0.424216295861138,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.405820753925408,1.239293992399,0,0,0.687743287091848,0,0,8.02209014131124,2.96365403663912,0,0,0,0.670302275535787,0,0.753150406214233,0,0,0,0.229723400206959,1.01489521846434,1.52927441428475,1.13929437434833,0.952927101831156,1.64544909234478,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.4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| |||
|short_description=p3@TNFAIP8 | |||
}} |
Revision as of 12:48, 13 September 2013
Short description: | p3@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TNFAIP8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -29bp_to_ENST00000415806_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.23e-51 | 108 |
hematopoietic system | 1.63e-51 | 98 |
blood island | 1.63e-51 | 98 |
bone marrow | 1.51e-49 | 76 |
immune system | 1.76e-48 | 93 |
bone element | 6.04e-46 | 82 |
skeletal element | 6.91e-40 | 90 |
skeletal system | 1.19e-36 | 100 |
lateral plate mesoderm | 6.30e-22 | 203 |
connective tissue | 7.21e-22 | 371 |
musculoskeletal system | 2.21e-20 | 167 |
mesoderm | 2.52e-11 | 315 |
mesoderm-derived structure | 2.52e-11 | 315 |
presumptive mesoderm | 2.52e-11 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.