FFCP PHASE1:Hg19::chr5:119740561..119740564,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-29bp_to_BC011941_5end|coexpression_cluster_id=C2732|description=CAGE_peak_1_at_BC011941_5end|id=chr5:119740561..119740564,-|ontology_enrichment_celltype=CL:0002194!4.63e-13!63;CL:0000576!4.63e-13!63;CL:0000040!4.63e-13!63;CL:0000559!4.63e-13!63;CL:0002009!1.88e-12!65;CL:0002057!3.93e-11!42;CL:0000839!4.30e-11!70;CL:0000557!7.62e-11!71;CL:0000188!1.41e-10!9;CL:0000048!2.33e-10!430;CL:0000860!4.55e-10!45;CL:0000723!6.01e-10!436;CL:0000034!6.67e-10!444;CL:0000766!1.04e-09!76;CL:0000148!3.56e-09!10;CL:0000541!3.56e-09!10;CL:0000710!4.84e-08!20;CL:0000219!5.69e-08!390;CL:0002371!1.15e-07!591|ontology_enrichment_celltype_v019=CL:0000473;1.79e-20;39!CL:0000234;1.79e-20;39!CL:0000235;5.66e-17;6!CL:0000860;1.67e-12;33!CL:0002057;1.67e-12;33!CL:0000148;1.79e-10;10!CL:0002567;2.93e-09;3!CL:0000222;4.27e-08;1!CL:0000766;6.80e-08;69!CL:0000147;1.66e-07;14!CL:0000228;2.10e-07;1!CL:0002372;2.10e-07;1!CL:0002591;2.10e-07;1|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-19,48;CL:0000234,1.62e-19,48;CL:0000235,6.55e-17,6;CL:0002194,4.16e-15,59;CL:0000576,4.16e-15,59;CL:0000040,4.16e-15,59;CL:0000559,4.16e-15,59;CL:0002009,1.54e-14,61;CL:0000839,2.90e-13,66;CL:0000557,4.94e-13,67;CL:0000766,5.74e-12,72;CL:0000860,1.07e-10,42;CL:0002057,1.07e-10,42;CL:0000148,2.00e-10,10;CL:0000541,2.00e-10,10;CL:0002567,3.69e-09,3;CL:0000147,1.80e-07,14;CL:0000228,1.91e-07,1;CL:0002372,1.91e-07,1;CL:0002591,2.98e-07,1;CL:0000763,3.35e-07,108;CL:0000049,3.35e-07,108|ontology_enrichment_development_v019=CL:0002057;1.55e-08;42|ontology_enrichment_disease=DOID:2394!2.71e-12!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!5.84e-09!167;UBERON:0002371!6.59e-09!80;UBERON:0002119!2.18e-08!4;UBERON:0004531!2.18e-08!4;UBERON:0001474!7.41e-08!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-11,76;UBERON:0001474,3.18e-10,82;UBERON:0004765,4.15e-09,90;UBERON:0002405,9.72e-09,93;UBERON:0002204,2.43e-08,167;UBERON:0002390,3.57e-08,98;UBERON:0003061,3.57e-08,98;UBERON:0001434,5.79e-08,100;UBERON:0002193,3.35e-07,108|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,1.54853185447552,0.28769239232215,0,0.47296445977717,1.37898272294647,0,5.41705946377367,0.188242339542605,0,0.449446968890169,0,0.320929027076094,1.91801137739712,0,0,0,2.03146467040009,3.40431134814684,1.24564449799115,0,0,0.434377689410233,0.605399502633369,4.78760926783834,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.886917589850256,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24484414159907,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0.352303495931295,0.647491777472526,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,1.40402559083543,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,2.29193055334967,1.17217447210047,0,0.308482478109971,15.0171528921959,3.71574362419752,0.224262168690721,0,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,2.28015329005615,0,0,0,0,0,2.43247561282381,0,4.21667878966063,0,0,1.42636905040718,0.434343920002738,0,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.767518373630648,0.827019434907183,0,0.580066775656914,1.78975917573812,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0.899362287916574,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,2.62357900818653,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88133323329131,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.443565449968902,0.318593534327405,5.39763734596325,0.310525913752519,0.829412415681711,0.53168342911599,0.521745061811734,3.45592500693602,0,0,0.181848659202559,0.107410557042488,1.85613503951397,0,2.80019435264208,0,0.336749488765919,39.1173184508818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p1@BC011941}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_BC011941_5end | |||
|coexpression_cluster_id=C2732 | |||
|description=CAGE_peak_1_at_BC011941_5end | |||
|id=chr5:119740561..119740564,- | |||
|ontology_enrichment_celltype=CL:0002194!4.63e-13!63;CL:0000576!4.63e-13!63;CL:0000040!4.63e-13!63;CL:0000559!4.63e-13!63;CL:0002009!1.88e-12!65;CL:0002057!3.93e-11!42;CL:0000839!4.30e-11!70;CL:0000557!7.62e-11!71;CL:0000188!1.41e-10!9;CL:0000048!2.33e-10!430;CL:0000860!4.55e-10!45;CL:0000723!6.01e-10!436;CL:0000034!6.67e-10!444;CL:0000766!1.04e-09!76;CL:0000148!3.56e-09!10;CL:0000541!3.56e-09!10;CL:0000710!4.84e-08!20;CL:0000219!5.69e-08!390;CL:0002371!1.15e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.79e-20;39!CL:0000234;1.79e-20;39!CL:0000235;5.66e-17;6!CL:0000860;1.67e-12;33!CL:0002057;1.67e-12;33!CL:0000148;1.79e-10;10!CL:0002567;2.93e-09;3!CL:0000222;4.27e-08;1!CL:0000766;6.80e-08;69!CL:0000147;1.66e-07;14!CL:0000228;2.10e-07;1!CL:0002372;2.10e-07;1!CL:0002591;2.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-19,48;CL:0000234,1.62e-19,48;CL:0000235,6.55e-17,6;CL:0002194,4.16e-15,59;CL:0000576,4.16e-15,59;CL:0000040,4.16e-15,59;CL:0000559,4.16e-15,59;CL:0002009,1.54e-14,61;CL:0000839,2.90e-13,66;CL:0000557,4.94e-13,67;CL:0000766,5.74e-12,72;CL:0000860,1.07e-10,42;CL:0002057,1.07e-10,42;CL:0000148,2.00e-10,10;CL:0000541,2.00e-10,10;CL:0002567,3.69e-09,3;CL:0000147,1.80e-07,14;CL:0000228,1.91e-07,1;CL:0002372,1.91e-07,1;CL:0002591,2.98e-07,1;CL:0000763,3.35e-07,108;CL:0000049,3.35e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-08;42 | |||
|ontology_enrichment_disease=DOID:2394!2.71e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.84e-09!167;UBERON:0002371!6.59e-09!80;UBERON:0002119!2.18e-08!4;UBERON:0004531!2.18e-08!4;UBERON:0001474!7.41e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-11,76;UBERON:0001474,3.18e-10,82;UBERON:0004765,4.15e-09,90;UBERON:0002405,9.72e-09,93;UBERON:0002204,2.43e-08,167;UBERON:0002390,3.57e-08,98;UBERON:0003061,3.57e-08,98;UBERON:0001434,5.79e-08,100;UBERON:0002193,3.35e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,1.54853185447552,0.28769239232215,0,0.47296445977717,1.37898272294647,0,5.41705946377367,0.188242339542605,0,0.449446968890169,0,0.320929027076094,1.91801137739712,0,0,0,2.03146467040009,3.40431134814684,1.24564449799115,0,0,0.434377689410233,0.605399502633369,4.78760926783834,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.886917589850256,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24484414159907,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0.352303495931295,0.647491777472526,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,1.40402559083543,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,2.29193055334967,1.17217447210047,0,0.308482478109971,15.0171528921959,3.71574362419752,0.224262168690721,0,0.1466765716419,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,2.28015329005615,0,0,0,0,0,2.43247561282381,0,4.21667878966063,0,0,1.42636905040718,0.434343920002738,0,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.767518373630648,0.827019434907183,0,0.580066775656914,1.78975917573812,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0.899362287916574,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,2.62357900818653,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88133323329131,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.443565449968902,0.318593534327405,5.39763734596325,0.310525913752519,0.829412415681711,0.53168342911599,0.521745061811734,3.45592500693602,0,0,0.181848659202559,0.107410557042488,1.85613503951397,0,2.80019435264208,0,0.336749488765919,39.1173184508818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BC011941 | |||
}} |
Revision as of 12:51, 13 September 2013
Short description: | p1@BC011941 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC011941_5end |
Coexpression cluster: | C2732_mesodermal_gastrointestinal_Melanocyte_CD14_mesenchymal_basal_Monocytederived |
Association with transcript: | -29bp_to_BC011941_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.62e-19 | 48 |
phagocyte | 1.62e-19 | 48 |
macrophage | 6.55e-17 | 6 |
monopoietic cell | 4.16e-15 | 59 |
monocyte | 4.16e-15 | 59 |
monoblast | 4.16e-15 | 59 |
promonocyte | 4.16e-15 | 59 |
macrophage dendritic cell progenitor | 1.54e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.90e-13 | 66 |
granulocyte monocyte progenitor cell | 4.94e-13 | 67 |
myeloid leukocyte | 5.74e-12 | 72 |
classical monocyte | 1.07e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-10 | 42 |
melanocyte | 2.00e-10 | 10 |
melanoblast | 2.00e-10 | 10 |
light melanocyte | 3.69e-09 | 3 |
pigment cell | 1.80e-07 | 14 |
multinucleate cell | 1.91e-07 | 1 |
myotube | 1.91e-07 | 1 |
smooth muscle cell of the pulmonary artery | 2.98e-07 | 1 |
myeloid cell | 3.35e-07 | 108 |
common myeloid progenitor | 3.35e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.24e-11 | 76 |
bone element | 3.18e-10 | 82 |
skeletal element | 4.15e-09 | 90 |
immune system | 9.72e-09 | 93 |
musculoskeletal system | 2.43e-08 | 167 |
hematopoietic system | 3.57e-08 | 98 |
blood island | 3.57e-08 | 98 |
skeletal system | 5.79e-08 | 100 |
hemolymphoid system | 3.35e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.