FFCP PHASE1:Hg19::chr5:157477625..157477653,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2541|description=CAGE_peak_at_chr5:157477625..157477653,-|id=chr5:157477625..157477653,-|ontology_enrichment_celltype=CL:0000136!1.30e-14!15;CL:0002615!4.07e-10!3;CL:0002580!8.44e-10!3;CL:0002617!2.05e-07!2|ontology_enrichment_celltype_v019=CL:0002615;1.95e-40;3!CL:0000136;7.20e-37;13!CL:0002617;3.85e-28;2!CL:0002580;2.12e-18;3!CL:0002616;5.42e-15;1!CL:0002334;1.73e-10;12|ontology_enrichment_celltype_v019_2=CL:0002615,1.71e-40,3;CL:0000136,5.66e-32,15;CL:0002617,3.60e-28,2;CL:0002580,2.12e-18,3;CL:0002616,5.42e-15,1;CL:0002334,1.74e-10,12|ontology_enrichment_development_v019=UBERON:0005425;1.97e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.11e-23!115;UBERON:0001443!1.69e-09!11;UBERON:0003688!1.41e-08!6;UBERON:0002358!1.41e-08!6;UBERON:0003684!1.41e-08!6;UBERON:0001178!1.41e-08!6;UBERON:0001893!4.00e-08!34;UBERON:0000310!1.63e-07!10;UBERON:0001869!2.36e-07!32;UBERON:0000341!3.50e-07!2;UBERON:0002791!4.73e-07!33;UBERON:0001876!8.34e-07!2;UBERON:0001950!9.24e-07!20|ontology_enrichment_uberon_v019=UBERON:0003688;1.05e-35;6!UBERON:0002358;1.05e-35;6!UBERON:0003684;1.05e-35;6!UBERON:0001178;1.05e-35;6!UBERON:0000341;4.67e-27;2!UBERON:0004457;5.94e-24;9!UBERON:0000042;5.94e-24;9!UBERON:0000310;1.31e-21;10!UBERON:0001443;1.12e-19;11!UBERON:0006834;8.17e-15;1!UBERON:0005795;1.97e-14;1!UBERON:0000941;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0000974;1.10e-09;6!UBERON:0005406;3.82e-08;2!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.61e-36,6;UBERON:0002358,9.61e-36,6;UBERON:0003684,9.61e-36,6;UBERON:0001178,9.61e-36,6;UBERON:0000341,4.09e-27,2;UBERON:0000310,1.28e-21,10;UBERON:0001443,1.09e-19,11;UBERON:0004457,4.45e-18,12;UBERON:0000042,4.45e-18,12;UBERON:0006834,8.17e-15,1;UBERON:0000941,1.41e-14,1;UBERON:0001785,1.41e-14,1;UBERON:0002464,1.41e-14,1;UBERON:0004904,1.41e-14,1;UBERON:0001021,1.41e-14,1;UBERON:0003902,1.41e-14,1;UBERON:0005425,1.41e-14,1;UBERON:0005406,3.82e-08,2;UBERON:0003714,6.15e-08,2;UBERON:0005162,6.15e-08,2;UBERON:0000122,6.15e-08,2;UBERON:0009569,7.59e-07,112|phase1_expression=5.81370813665781,8.99222200342129,1.40954404095971,5.00366491765652,3.12872766099101,6.10636966870258,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,1.38115775959256,1.40330047216537,0,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,1.0661699095049,1.90451545170992,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0.435433495793923,0,0.336760265072938,0.215166616178029,0.332660356546013,0,0,0,0,0,4.15620910221746,1.22068853494722,0,0.402547587182052,0|short_description=p@chr5:157477625..157477653,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2541 | |||
|description=CAGE_peak_at_chr5:157477625..157477653,- | |||
|id=chr5:157477625..157477653,- | |||
|ontology_enrichment_celltype=CL:0000136!1.30e-14!15;CL:0002615!4.07e-10!3;CL:0002580!8.44e-10!3;CL:0002617!2.05e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.95e-40;3!CL:0000136;7.20e-37;13!CL:0002617;3.85e-28;2!CL:0002580;2.12e-18;3!CL:0002616;5.42e-15;1!CL:0002334;1.73e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.71e-40,3;CL:0000136,5.66e-32,15;CL:0002617,3.60e-28,2;CL:0002580,2.12e-18,3;CL:0002616,5.42e-15,1;CL:0002334,1.74e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.97e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-23!115;UBERON:0001443!1.69e-09!11;UBERON:0003688!1.41e-08!6;UBERON:0002358!1.41e-08!6;UBERON:0003684!1.41e-08!6;UBERON:0001178!1.41e-08!6;UBERON:0001893!4.00e-08!34;UBERON:0000310!1.63e-07!10;UBERON:0001869!2.36e-07!32;UBERON:0000341!3.50e-07!2;UBERON:0002791!4.73e-07!33;UBERON:0001876!8.34e-07!2;UBERON:0001950!9.24e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.05e-35;6!UBERON:0002358;1.05e-35;6!UBERON:0003684;1.05e-35;6!UBERON:0001178;1.05e-35;6!UBERON:0000341;4.67e-27;2!UBERON:0004457;5.94e-24;9!UBERON:0000042;5.94e-24;9!UBERON:0000310;1.31e-21;10!UBERON:0001443;1.12e-19;11!UBERON:0006834;8.17e-15;1!UBERON:0005795;1.97e-14;1!UBERON:0000941;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0000974;1.10e-09;6!UBERON:0005406;3.82e-08;2!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.61e-36,6;UBERON:0002358,9.61e-36,6;UBERON:0003684,9.61e-36,6;UBERON:0001178,9.61e-36,6;UBERON:0000341,4.09e-27,2;UBERON:0000310,1.28e-21,10;UBERON:0001443,1.09e-19,11;UBERON:0004457,4.45e-18,12;UBERON:0000042,4.45e-18,12;UBERON:0006834,8.17e-15,1;UBERON:0000941,1.41e-14,1;UBERON:0001785,1.41e-14,1;UBERON:0002464,1.41e-14,1;UBERON:0004904,1.41e-14,1;UBERON:0001021,1.41e-14,1;UBERON:0003902,1.41e-14,1;UBERON:0005425,1.41e-14,1;UBERON:0005406,3.82e-08,2;UBERON:0003714,6.15e-08,2;UBERON:0005162,6.15e-08,2;UBERON:0000122,6.15e-08,2;UBERON:0009569,7.59e-07,112 | |||
|phase1_expression=5.81370813665781,8.99222200342129,1.40954404095971,5.00366491765652,3.12872766099101,6.10636966870258,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,1.38115775959256,1.40330047216537,0,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,1.0661699095049,1.90451545170992,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0.435433495793923,0,0.336760265072938,0.215166616178029,0.332660356546013,0,0,0,0,0,4.15620910221746,1.22068853494722,0,0.402547587182052,0 | |||
|short_description=p@chr5:157477625..157477653,- | |||
}} |
Revision as of 14:27, 13 September 2013
Short description: | p@chr5:157477625..157477653, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:157477625..157477653, - |
Coexpression cluster: | C2541_Adipocyte_uterus_Preadipocyte_throat_tongue_skin_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.71e-40 | 3 |
fat cell | 5.66e-32 | 15 |
adipocyte of breast | 3.60e-28 | 2 |
preadipocyte of the breast | 2.12e-18 | 3 |
perirenal adipocyte cell | 5.42e-15 | 1 |
preadipocyte | 1.74e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.61e-36 | 6 |
peritoneum | 9.61e-36 | 6 |
abdominal cavity | 9.61e-36 | 6 |
visceral peritoneum | 9.61e-36 | 6 |
throat | 4.09e-27 | 2 |
breast | 1.28e-21 | 10 |
chest | 1.09e-19 | 11 |
cavity lining | 4.45e-18 | 12 |
serous membrane | 4.45e-18 | 12 |
uterus or analog | 8.17e-15 | 1 |
cranial nerve II | 1.41e-14 | 1 |
cranial nerve | 1.41e-14 | 1 |
nerve trunk | 1.41e-14 | 1 |
nerve connecting eye with brain | 1.41e-14 | 1 |
nerve | 1.41e-14 | 1 |
retinal neural layer | 1.41e-14 | 1 |
presumptive neural retina | 1.41e-14 | 1 |
perirenal fat | 3.82e-08 | 2 |
neural tissue | 6.15e-08 | 2 |
multi cell component structure | 6.15e-08 | 2 |
neuron projection bundle | 6.15e-08 | 2 |
subdivision of trunk | 7.59e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.