FFCP PHASE1:Hg19::chr6:170124005..170124009,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1650|description=CAGE_peak_at_chr6:170124005..170124009,+|id=chr6:170124005..170124009,+|ontology_enrichment_celltype=CL:0000839!1.19e-53!70;CL:0000557!1.00e-52!71;CL:0000766!1.82e-48!76;CL:0002194!2.40e-48!63;CL:0000576!2.40e-48!63;CL:0000040!2.40e-48!63;CL:0000559!2.40e-48!63;CL:0002009!1.59e-46!65;CL:0002057!4.70e-39!42;CL:0000860!7.06e-36!45;CL:0000763!1.54e-30!112;CL:0000049!1.54e-30!112;CL:0002031!4.93e-25!124;CL:0000738!5.40e-22!140;CL:0002087!1.81e-20!119;CL:0002032!7.37e-17!165;CL:0000837!7.37e-17!165;CL:0000037!1.07e-15!172;CL:0000566!1.07e-15!172;CL:0000988!3.35e-14!182;CL:0002274!6.19e-09!5;CL:0000457!6.19e-09!5;CL:0002191!6.19e-09!5;CL:0000097!6.19e-09!5;CL:0000831!6.19e-09!5;CL:0002028!6.19e-09!5;CL:0000235!1.13e-08!10;CL:0000134!5.13e-07!358|ontology_enrichment_celltype_v019=CL:0000097;4.48e-30;5!CL:0000235;6.62e-26;6!CL:0000473;9.54e-24;39!CL:0000234;9.54e-24;39!CL:0000766;3.23e-22;69!CL:0000163;4.78e-17;9!CL:0000860;3.32e-16;33!CL:0002057;3.32e-16;33!CL:0000763;1.89e-11;100!CL:0000576;2.43e-10;48!CL:0000738;1.41e-08;136|ontology_enrichment_celltype_v019_2=CL:0000839,1.41e-34,66;CL:0000557,4.65e-34,67;CL:0000766,1.11e-31,72;CL:0000097,3.86e-30,5;CL:0002028,3.86e-30,5;CL:0000473,3.09e-27,48;CL:0000234,3.09e-27,48;CL:0000235,6.62e-26,6;CL:0002194,1.12e-21,59;CL:0000576,1.12e-21,59;CL:0000040,1.12e-21,59;CL:0000559,1.12e-21,59;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0002009,5.85e-21,61;CL:0002031,8.13e-19,120;CL:0000163,4.41e-17,9;CL:0000738,1.60e-16,136;CL:0000860,6.35e-14,42;CL:0002057,6.35e-14,42;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0002087,6.87e-11,115|ontology_enrichment_development_v019=CL:0002057;9.96e-11;42!CL:0000049;1.32e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.94e-45!80;UBERON:0001474!2.00e-41!86;UBERON:0004765!1.79e-33!101;UBERON:0001434!1.79e-33!101;UBERON:0002390!5.00e-33!102;UBERON:0003061!5.00e-33!102;UBERON:0002405!5.78e-31!115;UBERON:0002193!1.39e-30!112;UBERON:0002204!3.95e-22!167;UBERON:0003081!1.86e-13!216;UBERON:0000062!2.04e-07!511|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-30,76;UBERON:0001474,8.85e-28,82;UBERON:0004765,2.83e-25,90;UBERON:0002405,1.92e-24,93;UBERON:0002390,3.59e-23,98;UBERON:0003061,3.59e-23,98;UBERON:0001434,1.07e-22,100;UBERON:0002193,5.64e-21,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,2.18097358169347,0.377875943688809,0.485168122375632,0.929716147622738,0.822335776043652,0.619412741790207,0.575384784644301,0.256160706529101,0.47296445977717,1.37898272294647,0,0,1.31769637679823,1.09162460023138,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0.870627715885752,1.70215567407342,0,1.25624332628372,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0.290633938513962,0,0,1.84901711427775,0.621984346622316,1.00883967391873,1.38866676769018,0.253991577168676,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4598049025905,31.1399396687918,12.6500363689819,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1650 | |||
|description=CAGE_peak_at_chr6:170124005..170124009,+ | |||
|id=chr6:170124005..170124009,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.19e-53!70;CL:0000557!1.00e-52!71;CL:0000766!1.82e-48!76;CL:0002194!2.40e-48!63;CL:0000576!2.40e-48!63;CL:0000040!2.40e-48!63;CL:0000559!2.40e-48!63;CL:0002009!1.59e-46!65;CL:0002057!4.70e-39!42;CL:0000860!7.06e-36!45;CL:0000763!1.54e-30!112;CL:0000049!1.54e-30!112;CL:0002031!4.93e-25!124;CL:0000738!5.40e-22!140;CL:0002087!1.81e-20!119;CL:0002032!7.37e-17!165;CL:0000837!7.37e-17!165;CL:0000037!1.07e-15!172;CL:0000566!1.07e-15!172;CL:0000988!3.35e-14!182;CL:0002274!6.19e-09!5;CL:0000457!6.19e-09!5;CL:0002191!6.19e-09!5;CL:0000097!6.19e-09!5;CL:0000831!6.19e-09!5;CL:0002028!6.19e-09!5;CL:0000235!1.13e-08!10;CL:0000134!5.13e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.48e-30;5!CL:0000235;6.62e-26;6!CL:0000473;9.54e-24;39!CL:0000234;9.54e-24;39!CL:0000766;3.23e-22;69!CL:0000163;4.78e-17;9!CL:0000860;3.32e-16;33!CL:0002057;3.32e-16;33!CL:0000763;1.89e-11;100!CL:0000576;2.43e-10;48!CL:0000738;1.41e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.41e-34,66;CL:0000557,4.65e-34,67;CL:0000766,1.11e-31,72;CL:0000097,3.86e-30,5;CL:0002028,3.86e-30,5;CL:0000473,3.09e-27,48;CL:0000234,3.09e-27,48;CL:0000235,6.62e-26,6;CL:0002194,1.12e-21,59;CL:0000576,1.12e-21,59;CL:0000040,1.12e-21,59;CL:0000559,1.12e-21,59;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0002009,5.85e-21,61;CL:0002031,8.13e-19,120;CL:0000163,4.41e-17,9;CL:0000738,1.60e-16,136;CL:0000860,6.35e-14,42;CL:0002057,6.35e-14,42;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0002087,6.87e-11,115 | |||
|ontology_enrichment_development_v019=CL:0002057;9.96e-11;42!CL:0000049;1.32e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.94e-45!80;UBERON:0001474!2.00e-41!86;UBERON:0004765!1.79e-33!101;UBERON:0001434!1.79e-33!101;UBERON:0002390!5.00e-33!102;UBERON:0003061!5.00e-33!102;UBERON:0002405!5.78e-31!115;UBERON:0002193!1.39e-30!112;UBERON:0002204!3.95e-22!167;UBERON:0003081!1.86e-13!216;UBERON:0000062!2.04e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-30,76;UBERON:0001474,8.85e-28,82;UBERON:0004765,2.83e-25,90;UBERON:0002405,1.92e-24,93;UBERON:0002390,3.59e-23,98;UBERON:0003061,3.59e-23,98;UBERON:0001434,1.07e-22,100;UBERON:0002193,5.64e-21,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203 | |||
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|short_description=p@chr6:170124005..170124009,+ | |||
}} |
Revision as of 19:27, 13 September 2013
Short description: | p@chr6:170124005..170124009, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:170124005..170124009, + |
Coexpression cluster: | C1650_Monocytederived_CD14_Skeletal_Mast_melanoma_Melanocyte_nasal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.41e-34 | 66 |
granulocyte monocyte progenitor cell | 4.65e-34 | 67 |
myeloid leukocyte | 1.11e-31 | 72 |
mast cell | 3.86e-30 | 5 |
basophil mast progenitor cell | 3.86e-30 | 5 |
defensive cell | 3.09e-27 | 48 |
phagocyte | 3.09e-27 | 48 |
macrophage | 6.62e-26 | 6 |
monopoietic cell | 1.12e-21 | 59 |
monocyte | 1.12e-21 | 59 |
monoblast | 1.12e-21 | 59 |
promonocyte | 1.12e-21 | 59 |
myeloid cell | 5.64e-21 | 108 |
common myeloid progenitor | 5.64e-21 | 108 |
macrophage dendritic cell progenitor | 5.85e-21 | 61 |
hematopoietic lineage restricted progenitor cell | 8.13e-19 | 120 |
endocrine cell | 4.41e-17 | 9 |
leukocyte | 1.60e-16 | 136 |
classical monocyte | 6.35e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.35e-14 | 42 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
nongranular leukocyte | 6.87e-11 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.34e-30 | 76 |
bone element | 8.85e-28 | 82 |
skeletal element | 2.83e-25 | 90 |
immune system | 1.92e-24 | 93 |
hematopoietic system | 3.59e-23 | 98 |
blood island | 3.59e-23 | 98 |
skeletal system | 1.07e-22 | 100 |
hemolymphoid system | 5.64e-21 | 108 |
musculoskeletal system | 2.60e-13 | 167 |
lateral plate mesoderm | 8.49e-11 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.